LOCUS       DBBZXW010000001        91584 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.001, whole genome shotgun sequence.
ACCESSION   DBBZXW010000001 DBBZXW010000000
VERSION     DBBZXW010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 91584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 91584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..91584
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.001"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..1114)
                     /gene="mnmC"
                     /locus_tag="ACJJD2_000001"
     CDS             complement(<1..1114)
                     /gene="mnmC"
                     /locus_tag="ACJJD2_000001"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HGG7578637.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLNTPYAEPLCGLFWQHGVW
                     LNLPAFVRALLRHPLIGLHEDTPLTGISHDGEKWIASTPNGIFSATHIVYCTGAHSPC
                     LPEINLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGE"
     gene            1234..1602
                     /locus_tag="ACJJD2_000002"
     CDS             1234..1602
                     /locus_tag="ACJJD2_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HGG7578638.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQIADLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            1645..2382
                     /gene="ubiE"
                     /locus_tag="ACJJD2_000003"
     CDS             1645..2382
                     /gene="ubiE"
                     /locus_tag="ACJJD2_000003"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HGG7578639.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDAESYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            2602..3081
                     /locus_tag="ACJJD2_000004"
     CDS             2602..3081
                     /locus_tag="ACJJD2_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HGG7578640.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(3209..3703)
                     /gene="folK"
                     /locus_tag="ACJJD2_000005"
     CDS             complement(3209..3703)
                     /gene="folK"
                     /locus_tag="ACJJD2_000005"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HGG7578641.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDTRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDR"
     gene            complement(3713..4087)
                     /locus_tag="ACJJD2_000006"
     CDS             complement(3713..4087)
                     /locus_tag="ACJJD2_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HGG7578642.1"
                     /translation="MQYLFVKYSHQIFVTITILVFNIRFFLLWKNPEKPLAGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            complement(4141..4707)
                     /locus_tag="ACJJD2_000007"
     CDS             complement(4141..4707)
                     /locus_tag="ACJJD2_000007"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7578643.1"
                     /translation="MLLKNILPFAHCLLRQALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALNNTRCRLQEAGYSNVRFILDGHENLKQYIPKPLDAAIFNFGWLP
                     GGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAVGQWAKNLPQE
                     QFAVLRYGFTNRKNSPPYLLAFEKLRQK"
     gene            complement(4791..5084)
                     /gene="hfq"
                     /locus_tag="ACJJD2_000008"
     CDS             complement(4791..5084)
                     /gene="hfq"
                     /locus_tag="ACJJD2_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HGG7578644.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPASTLVQVETVQQPAE"
     gene            complement(5213..6151)
                     /locus_tag="ACJJD2_000009"
     CDS             complement(5213..6151)
                     /locus_tag="ACJJD2_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HGG7578645.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            6575..7015
                     /locus_tag="ACJJD2_000010"
     CDS             6575..7015
                     /locus_tag="ACJJD2_000010"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HGG7578646.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            7067..7942
                     /gene="xerD"
                     /locus_tag="ACJJD2_000011"
     CDS             7067..7942
                     /gene="xerD"
                     /locus_tag="ACJJD2_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HGG7578647.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLATPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            8114..8314
                     /locus_tag="ACJJD2_000012"
     CDS             8114..8314
                     /locus_tag="ACJJD2_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HGG7578648.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            8480..8713
                     /locus_tag="ACJJD2_000013"
     CDS             8480..8713
                     /locus_tag="ACJJD2_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HGG7578649.1"
                     /translation="MKLTLMFREYCSLCHKMRDELKPFQDEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(9237..10100)
                     /gene="rfbD"
                     /locus_tag="ACJJD2_000014"
     CDS             complement(9237..10100)
                     /gene="rfbD"
                     /locus_tag="ACJJD2_000014"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HGG7578650.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
     gene            10300..11163
                     /locus_tag="ACJJD2_000015"
     CDS             10300..11163
                     /locus_tag="ACJJD2_000015"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HGG7578651.1"
                     /translation="MSEIGLVKIYFGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLVHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            11400..13520
                     /gene="pnp"
                     /locus_tag="ACJJD2_000016"
     CDS             11400..13520
                     /gene="pnp"
                     /locus_tag="ACJJD2_000016"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HGG7578652.1"
                     /translation="MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPELWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWSA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRAITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(13593..14261)
                     /locus_tag="ACJJD2_000017"
     CDS             complement(13593..14261)
                     /locus_tag="ACJJD2_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7578653.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(14275..14571)
                     /locus_tag="ACJJD2_000018"
     CDS             complement(14275..14571)
                     /locus_tag="ACJJD2_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578654.1"
                     /translation="MFRILLLLFPCAILAACARNIPASPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            14708..15559
                     /gene="dapF"
                     /locus_tag="ACJJD2_000019"
     CDS             14708..15559
                     /gene="dapF"
                     /locus_tag="ACJJD2_000019"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HGG7578655.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVEQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAEAVF
                     EGELAYS"
     gene            15556..16161
                     /locus_tag="ACJJD2_000020"
     CDS             15556..16161
                     /locus_tag="ACJJD2_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578656.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            16355..17287
                     /gene="cysK"
                     /locus_tag="ACJJD2_000021"
     CDS             16355..17287
                     /gene="cysK"
                     /locus_tag="ACJJD2_000021"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HGG7578657.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVPNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            17449..17582
                     /locus_tag="ACJJD2_000022"
                     /pseudo
     CDS             17449..17582
                     /locus_tag="ACJJD2_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            17853..18758
                     /locus_tag="ACJJD2_000023"
     CDS             17853..18758
                     /locus_tag="ACJJD2_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7578658.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            18804..18953
                     /locus_tag="ACJJD2_000024"
     CDS             18804..18953
                     /locus_tag="ACJJD2_000024"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578659.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(19172..20191)
                     /gene="lepB"
                     /locus_tag="ACJJD2_000025"
     CDS             complement(19172..20191)
                     /gene="lepB"
                     /locus_tag="ACJJD2_000025"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HGG7578660.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRNKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFHSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(20334..22127)
                     /gene="lepA"
                     /locus_tag="ACJJD2_000026"
     CDS             complement(20334..22127)
                     /gene="lepA"
                     /locus_tag="ACJJD2_000026"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HGG7578661.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(22270..22971)
                     /locus_tag="ACJJD2_000027"
     CDS             complement(22270..22971)
                     /locus_tag="ACJJD2_000027"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HGG7578662.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPKVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            23139..24269
                     /locus_tag="ACJJD2_000028"
     CDS             23139..24269
                     /locus_tag="ACJJD2_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HGG7578663.1"
                     /translation="MFTDENMTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRAITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGDISLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            24303..25280
                     /locus_tag="ACJJD2_000029"
     CDS             24303..25280
                     /locus_tag="ACJJD2_000029"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HGG7578664.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHGEALAYLRDRGVAEPEEFLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            25284..25634
                     /locus_tag="ACJJD2_000030"
     CDS             25284..25634
                     /locus_tag="ACJJD2_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HGG7578665.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            25639..26418
                     /locus_tag="ACJJD2_000031"
     CDS             25639..26418
                     /locus_tag="ACJJD2_000031"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG7578666.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQVLAISVSRESF
                     SEVFAIAEAHEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDTAFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRYTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRVV"
     gene            26444..26659
                     /locus_tag="ACJJD2_000032"
     CDS             26444..26659
                     /locus_tag="ACJJD2_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HGG7578667.1"
                     /translation="MKAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYFRSQH"
     gene            26760..27071
                     /gene="grxD"
                     /locus_tag="ACJJD2_000033"
     CDS             26760..27071
                     /gene="grxD"
                     /locus_tag="ACJJD2_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HGG7578668.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            27177..27803
                     /gene="upp"
                     /locus_tag="ACJJD2_000034"
     CDS             27177..27803
                     /gene="upp"
                     /locus_tag="ACJJD2_000034"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HGG7578669.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            27826..28146
                     /locus_tag="ACJJD2_000035"
     CDS             27826..28146
                     /locus_tag="ACJJD2_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HGG7578670.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            28397..28819
                     /locus_tag="ACJJD2_000036"
     CDS             28397..28819
                     /locus_tag="ACJJD2_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HGG7578671.1"
                     /translation="MKKMFLSAVLLLSAAAQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLSGRSDRWQGMGSGRWATMKFQNGEFMYTIWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPQTAQANFNDADFSR"
     gene            28837..29598
                     /locus_tag="ACJJD2_000037"
     CDS             28837..29598
                     /locus_tag="ACJJD2_000037"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HGG7578672.1"
                     /translation="METAKPIMLIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKIHIAVGQGSRRALERYLGRTV
                     IAPHDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEMAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            29673..30947
                     /locus_tag="ACJJD2_000038"
     CDS             29673..30947
                     /locus_tag="ACJJD2_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HGG7578673.1"
                     /translation="MPSETSSPRKENETEVHIPAAPFIVKQSGSNALAVCALVLAALG
                     LGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAALLKDNLNRQAAIQSELDRLD
                     GNVKANGEQILEMQKSYRELTKGRADWLVDETETILNLAAQQLVLTGNIQTAVGVLEH
                     IDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGTALRLDRLEIAVSGLPLILDG
                     VLKPSVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRLENNDAMLISPEQAYFVRENL
                     RLRLLDARTALMQRNSEVYQGDLNNAETAVRQYFDAKSPATQSWLKELAELKALDVRM
                     TADDGLKNSLNAVRAYRDGTRMTTAENQEAEQATSEPANENTASEPAAASDVKTIEAP
                     SLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            30944..32161
                     /locus_tag="ACJJD2_000039"
     CDS             30944..32161
                     /locus_tag="ACJJD2_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HGG7578674.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETC"
     gene            32236..33300
                     /gene="hemE"
                     /locus_tag="ACJJD2_000040"
     CDS             32236..33300
                     /gene="hemE"
                     /locus_tag="ACJJD2_000040"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HGG7578675.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEDDIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDEAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGQGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            33489..34868
                     /gene="radA"
                     /locus_tag="ACJJD2_000041"
     CDS             33489..34868
                     /gene="radA"
                     /locus_tag="ACJJD2_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HGG7578676.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPLPEKMVAF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICREDRD"
     gene            complement(34939..35418)
                     /locus_tag="ACJJD2_000042"
     CDS             complement(34939..35418)
                     /locus_tag="ACJJD2_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HGG7578677.1"
                     /translation="MKHILPLIAASALCISTASAHPAGKPPTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMNIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(35660..36019)
                     /locus_tag="ACJJD2_000043"
     CDS             complement(35660..36019)
                     /locus_tag="ACJJD2_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG7578678.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(36058..39672)
                     /gene="recB"
                     /locus_tag="ACJJD2_000044"
     CDS             complement(36058..39672)
                     /gene="recB"
                     /locus_tag="ACJJD2_000044"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HGG7578679.1"
                     /translation="MSAPIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQISRYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTICRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAALKKGKTPDAAAFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAGDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTENAPPPAAYRSNAGQTAE
                     FAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYDLSDISPECRCPEMGFTLHTEDFSLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFVDMVCQDPDGNICVIDYKSNHLGTDASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
     gene            complement(39752..40660)
                     /locus_tag="ACJJD2_000045"
     CDS             complement(39752..40660)
                     /locus_tag="ACJJD2_000045"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HGG7578680.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
     gene            40945..41772
                     /locus_tag="ACJJD2_000046"
     CDS             40945..41772
                     /locus_tag="ACJJD2_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7578681.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            41762..42478
                     /locus_tag="ACJJD2_000047"
     CDS             41762..42478
                     /locus_tag="ACJJD2_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG7578682.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMVIAVAVALVRIMPAGGIARKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            42488..43243
                     /locus_tag="ACJJD2_000048"
     CDS             42488..43243
                     /locus_tag="ACJJD2_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG7578683.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(43263..44645)
                     /locus_tag="ACJJD2_000049"
     CDS             complement(43263..44645)
                     /locus_tag="ACJJD2_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HGG7578684.1"
                     /translation="MANIARDIFKAYDIRGIVGKTLTDDAAYLIGRAIAAKAAEKGMT
                     RIALGRDGRLSGPELMEHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIIEKDGFVAADKQGNVTEKDISGEYHNHI
                     VGHIKLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGNFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSSMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(44808..45317)
                     /locus_tag="ACJJD2_000050"
     CDS             complement(44808..45317)
                     /locus_tag="ACJJD2_000050"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7578685.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            complement(45436..46851)
                     /locus_tag="ACJJD2_000051"
     CDS             complement(45436..46851)
                     /locus_tag="ACJJD2_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HGG7578686.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            complement(47082..47444)
                     /locus_tag="ACJJD2_000052"
     CDS             complement(47082..47444)
                     /locus_tag="ACJJD2_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HGG7578687.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            complement(47441..47647)
                     /locus_tag="ACJJD2_000053"
     CDS             complement(47441..47647)
                     /locus_tag="ACJJD2_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HGG7578688.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            complement(47708..48286)
                     /gene="pth"
                     /locus_tag="ACJJD2_000054"
     CDS             complement(47708..48286)
                     /gene="pth"
                     /locus_tag="ACJJD2_000054"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HGG7578689.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            complement(48339..48617)
                     /locus_tag="ACJJD2_000055"
     CDS             complement(48339..48617)
                     /locus_tag="ACJJD2_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HGG7578690.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            complement(48610..49041)
                     /locus_tag="ACJJD2_000056"
     CDS             complement(48610..49041)
                     /locus_tag="ACJJD2_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HGG7578691.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            complement(49263..51230)
                     /gene="ftsH"
                     /locus_tag="ACJJD2_000057"
     CDS             complement(49263..51230)
                     /gene="ftsH"
                     /locus_tag="ACJJD2_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HGG7578692.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQIA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            complement(51294..51914)
                     /locus_tag="ACJJD2_000058"
     CDS             complement(51294..51914)
                     /locus_tag="ACJJD2_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HGG7578693.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            52024..52308
                     /gene="yhbY"
                     /locus_tag="ACJJD2_000059"
     CDS             52024..52308
                     /gene="yhbY"
                     /locus_tag="ACJJD2_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HGG7578694.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            52491..53492
                     /gene="hemB"
                     /locus_tag="ACJJD2_000060"
     CDS             52491..53492
                     /gene="hemB"
                     /locus_tag="ACJJD2_000060"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HGG7578695.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMQGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTLIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(53555..54712)
                     /locus_tag="ACJJD2_000061"
     CDS             complement(53555..54712)
                     /locus_tag="ACJJD2_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HGG7578696.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPMDCWLVLRGIKTLALRMNAHYQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAKTQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSVGIEDVDDIWNDISAALDTTL"
     gene            54904..55677
                     /gene="folE2"
                     /locus_tag="ACJJD2_000062"
     CDS             54904..55677
                     /gene="folE2"
                     /locus_tag="ACJJD2_000062"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HGG7578697.1"
                     /translation="MNTIADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHTEALDFAQLRRLTAEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIRSLLDYDVSLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTADAEVGIEEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            55878..56543
                     /locus_tag="ACJJD2_000063"
     CDS             55878..56543
                     /locus_tag="ACJJD2_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7578698.1"
                     /translation="MTVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYRAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSRQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(56598..57356)
                     /locus_tag="ACJJD2_000064"
     CDS             complement(56598..57356)
                     /locus_tag="ACJJD2_000064"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG7578699.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NHWEGDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(57381..58271)
                     /locus_tag="ACJJD2_000065"
     CDS             complement(57381..58271)
                     /locus_tag="ACJJD2_000065"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HGG7578700.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIRESKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            complement(58291..58857)
                     /locus_tag="ACJJD2_000066"
     CDS             complement(58291..58857)
                     /locus_tag="ACJJD2_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HGG7578701.1"
                     /translation="MSAFLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            complement(58908..59684)
                     /locus_tag="ACJJD2_000067"
     CDS             complement(58908..59684)
                     /locus_tag="ACJJD2_000067"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7578702.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPALDFAPDDSVGKIIRTVCDNGLSL"
     gene            complement(59739..60389)
                     /locus_tag="ACJJD2_000068"
     CDS             complement(59739..60389)
                     /locus_tag="ACJJD2_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HGG7578703.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGVRRTLSLLRPYLLPEHREKYDRKIGNGNP"
     gene            complement(60401..61441)
                     /gene="murB"
                     /locus_tag="ACJJD2_000069"
     CDS             complement(60401..61441)
                     /gene="murB"
                     /locus_tag="ACJJD2_000069"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HGG7578704.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            complement(61619..62998)
                     /gene="norM"
                     /locus_tag="ACJJD2_000070"
     CDS             complement(61619..62998)
                     /gene="norM"
                     /locus_tag="ACJJD2_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HGG7578705.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            63333..64484
                     /locus_tag="ACJJD2_000071"
     CDS             63333..64484
                     /locus_tag="ACJJD2_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HGG7578706.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTETVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTSERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            64588..65886
                     /locus_tag="ACJJD2_000072"
     CDS             64588..65886
                     /locus_tag="ACJJD2_000072"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HGG7578707.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAILAYYNVQLQHLHNAEPVKAEDVMAVIEKVALRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMEGWKESTFGIKNYEE
                     LPDNAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            66351..66734
                     /locus_tag="ACJJD2_000073"
     CDS             66351..66734
                     /locus_tag="ACJJD2_000073"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7578708.1"
                     /translation="MPKSLSLQDVQLRFSSKFPDKTVLKFTKNYEPVTIQCPLHGSVV
                     YGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGEIYEFASTLAASKFIGCSN
                     STLAVRLSGRTPFDRLIRYRYRLVK"
     gene            66748..67158
                     /locus_tag="ACJJD2_000074"
     CDS             66748..67158
                     /locus_tag="ACJJD2_000074"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7578709.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            67275..67667
                     /locus_tag="ACJJD2_000075"
     CDS             67275..67667
                     /locus_tag="ACJJD2_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7578710.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            67887..68048
                     /locus_tag="ACJJD2_000076"
                     /pseudo
     CDS             67887..68048
                     /locus_tag="ACJJD2_000076"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
     gene            68070..68267
                     /locus_tag="ACJJD2_000077"
     CDS             68070..68267
                     /locus_tag="ACJJD2_000077"
                     /inference="COORDINATES: protein motif:HMM:NF019096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUMOD1 domain-containing DNA-binding protein"
                     /protein_id="HGG7578711.1"
                     /translation="MKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALNTPYGSIR
                     TKLDGRSNPDNLVCNRYKVLL"
     gene            68275..68940
                     /locus_tag="ACJJD2_000078"
     CDS             68275..68940
                     /locus_tag="ACJJD2_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578712.1"
                     /translation="MENIEEYALLSPEALLERLDTVLSIRIGGKGWESSMTANFAQTL
                     VEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELNFKISEGSTRVESDFKETLVRFGR
                     DMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYLKQVASEGYQTERLYNAVDRLAES
                     QERITSAILKGARGADFVQIGRRSYSREDISEANRRAERVPYGAELVSDGNFTAVLSD
                     IGD"
     gene            complement(69243..70082)
                     /gene="htpX"
                     /locus_tag="ACJJD2_000079"
     CDS             complement(69243..70082)
                     /gene="htpX"
                     /locus_tag="ACJJD2_000079"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HGG7578713.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            70297..70944
                     /gene="adk"
                     /locus_tag="ACJJD2_000080"
     CDS             70297..70944
                     /gene="adk"
                     /locus_tag="ACJJD2_000080"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HGG7578714.1"
                     /translation="MKALFLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            71470..72210
                     /gene="pyrF"
                     /locus_tag="ACJJD2_000081"
     CDS             71470..72210
                     /gene="pyrF"
                     /locus_tag="ACJJD2_000081"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HGG7578715.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAASTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            72265..73236
                     /gene="hldA"
                     /locus_tag="ACJJD2_000082"
     CDS             72265..73236
                     /gene="hldA"
                     /locus_tag="ACJJD2_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HGG7578716.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            73273..74508
                     /locus_tag="ACJJD2_000083"
     CDS             73273..74508
                     /locus_tag="ACJJD2_000083"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7578717.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFSRVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            74510..75628
                     /locus_tag="ACJJD2_000084"
     CDS             74510..75628
                     /locus_tag="ACJJD2_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7578718.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPLIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEVLLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKNKMRIYPEGREKYLEYHRKFVFQDNIDDFL"
     gene            75669..76673
                     /gene="rfaD"
                     /locus_tag="ACJJD2_000085"
     CDS             75669..76673
                     /gene="rfaD"
                     /locus_tag="ACJJD2_000085"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HGG7578719.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LNWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVTFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            76746..78290
                     /locus_tag="ACJJD2_000086"
     CDS             76746..78290
                     /locus_tag="ACJJD2_000086"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HGG7578720.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPSQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAIVSNPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGSFFKKETNNNVLTEEHIADIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEIGETVAKIERLRREIDEV
                     IAEIEA"
     gene            78407..78490
                     /locus_tag="ACJJD2_000087"
                     /pseudo
     CDS             78407..78490
                     /locus_tag="ACJJD2_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-damage-inducible D domain protein"
     gene            78621..78962
                     /locus_tag="ACJJD2_000088"
     CDS             78621..78962
                     /locus_tag="ACJJD2_000088"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7578721.1"
                     /translation="MDIQSKAKKLIEMIQTAPVEWKPLGEVASIGKGKQLNKSLLREK
                     DKYPVINGGINPSGYWHEYNNEAGTIVISQGGASAGFVNWMDIPFFAGAHAYTIKANE
                     DKLLQRFAYYF"
     gene            78983..79789
                     /locus_tag="ACJJD2_000089"
     CDS             78983..79789
                     /locus_tag="ACJJD2_000089"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7578722.1"
                     /translation="MQCQYGAGIPALAKSELQNLLIPIPPLETQQKIVKILDKFTELE
                     AELALRKRQYRYYRDFLLDFDNQIGGGIADGYQCRLKDVVWKTLGEIAEYSKNRICSD
                     KLNEHNYVGVDNLLQNREGKKLSGYVPSEGKMTEYIANDILIGNIRPYLKKIWQADCT
                     GGTNGDVLVIRVTDEKVNPKYLYQVLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKIP
                     IPPLPEQEKIVAILDKFDTLTHSVSEGLPYEIALRRKQYEYYREQLLAFR"
     gene            79776..79997
                     /locus_tag="ACJJD2_000090"
     CDS             79776..79997
                     /locus_tag="ACJJD2_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578723.1"
                     /translation="MPFGRVGFSPPKQQQAATTVKQRQAGRWAEAHPTASGNRPAFRH
                     SVWKPENMAADAQNKEKKPIEMIQTASVG"
     gene            80181..80293
                     /locus_tag="ACJJD2_000091"
                     /pseudo
     CDS             80181..80293
                     /locus_tag="ACJJD2_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            80324..83455
                     /locus_tag="ACJJD2_000092"
     CDS             80324..83455
                     /locus_tag="ACJJD2_000092"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HGG7578724.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENQLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLGVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSTDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFHDHIVDGKLI
                     MKGNALGSESTESVFGRQLHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKK
                     LSAAENRQALLHPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYE
                     AFKTQQAGSLHPLKVATIFSFAANEEQNAVGEIADETFEPEAMDSSAKEFLQAAINDY
                     NACFKTNFGTDSKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPTLNTLFVDKNL
                     RYHGLMQAFSRTNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEE
                     YMNGYIDSQTGEARRGYLDVAKELRERFPDPDEIETEKDKKDFAKLFGEYLRAENVLQ
                     NYDEFAALRELQNVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYN
                     DIRDWLSRQKAGEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAE
                     LVEEIRRIIRASIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAG
                     LIAAEDLNETAAKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIA
                     AFVEKFAGIGTDI"
     gene            complement(83495..85786)
                     /gene="clpA"
                     /locus_tag="ACJJD2_000093"
     CDS             complement(83495..85786)
                     /gene="clpA"
                     /locus_tag="ACJJD2_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HGG7578725.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(85788..86090)
                     /gene="clpS"
                     /locus_tag="ACJJD2_000094"
     CDS             complement(85788..86090)
                     /gene="clpS"
                     /locus_tag="ACJJD2_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HGG7578726.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            86333..86536
                     /locus_tag="ACJJD2_000095"
     CDS             86333..86536
                     /locus_tag="ACJJD2_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HGG7578727.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            complement(86833..88164)
                     /gene="pmbA"
                     /locus_tag="ACJJD2_000096"
     CDS             complement(86833..88164)
                     /gene="pmbA"
                     /locus_tag="ACJJD2_000096"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HGG7578728.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRASTADFSEKALQDTVKAAIDIARYTAEDDCA
                     GLADASLMAQHIGDPDLYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHQQGTRHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPTQIGQT
                     AAERTLRRLNSRSIPTGSYPVLFDATVSGGLIGHLVGALSGGSLYRQSSFLIDSIGKQ
                     VLPDFLSLREEPHIPRAFGSTYFDSEGVATRPRFVIRDGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            88319..88825
                     /gene="yjgA"
                     /locus_tag="ACJJD2_000097"
     CDS             88319..88825
                     /gene="yjgA"
                     /locus_tag="ACJJD2_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HGG7578729.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAVHNAFLQRVE
                     QARVRLLADDGALTQFMSDFPHADAGKLRTLVRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            88872..89591
                     /locus_tag="ACJJD2_000098"
     CDS             88872..89591
                     /locus_tag="ACJJD2_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578730.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDKPADIAKLKQLGFEAVKLDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPPFLILDA
                     AGAVLALPVAALIAATNSSDK"
     gene            89660..91360
                     /gene="recJ"
                     /locus_tag="ACJJD2_000099"
     CDS             89660..91360
                     /gene="recJ"
                     /locus_tag="ACJJD2_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HGG7578731.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAARRLADAVERQEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQELGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVSLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDVEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTSFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAV
                     "
BASE COUNT        21683 a        22286 c        25640 g        21975 t
ORIGIN      
        1 tttcgcctga aacggcgcaa cgcagttgtt cggaaaacgg ggtggacggt gtgaggccgg
       61 tttgtccgcg tatttgcctg aggggcaggg cggcgaggtt gatttcgggc aggcaggggc
      121 tgtgcgcgcc ggtgcagtag acgatgtgtg tggcagaaaa gatgccgttt ggcgtgcttg
      181 caatccactt ttctccgtcg tgggaaatac cggttaacgg tgtgtcttcg tgtagtccaa
      241 tcagcggatg gcggaggagg gcgcggacga atgcgggtag attgagccat acgccgtgct
      301 gccaaaacag tccgcataat ggttcggcgt agggcgtgtt cagcgggata ccggcgattt
      361 tttcggcttc tgcctgcgtg atgctgcggt agaggtggtt atggtgtttt tgcaaaccca
      421 attcgtgatt gcgttgttgt tcggtgcggc tgtaattgag gtggatgatg ccgttgccgc
      481 cccaggtttc ggattcgggc aggatgtgtc cgagcaggcg tttggtgtag ccgtagccgg
      541 caagcagcag ttcggtttgt tcggtgtcgt gcggcgagat tttggcgtag agcagccctt
      601 ggcggttgcc gctggcggct tgggcggctt ttcgggcttc caatacggta acggaaatgc
      661 cgtgtgatgc taaggcgtgg gcggttgccg cgccggatat gcccgcgccg ataacgagga
      721 tgtgttccgg tttttgccgt tcggatgttt gtggaagtgc aaaccagggt ttgtcgggtt
      781 tgctttcggt ttgcgggatg gcttcggtct gccaggaaat gtggtggaag tgttcgtgca
      841 ggcggcgggt gcgtgaaggg ggaaccagcc agaagcggac atcgggcagg atgtgttcga
      901 tgaggttgat gctgtcgaac tggaggcact gcgttgcctg atccaaacgg tgcttcagac
      961 ggcattccgc gtccgaagca tcttgtgcgg tttgaaaatc gggaatctga ttatcgggga
     1021 ggcagacaat caggttgagc gggtgtgcgt gtttgcggat ggtttggtcg agtgtgcgga
     1081 tgtcgggaac gccgtcccat acgagattgt ccatatcaat gccgtttaaa gtgtgggttt
     1141 gaatatcggt atcgggataa agctgttaaa atacgcgccg tttgaaggca cgcctgcgcc
     1201 tgccggatat tgtatgccga accgaggtgt tttttgaata atattcctgt tgaaatccgt
     1261 ttgttgaaaa accgtaccgt gttggttttg acttatgggg acgaacctaa aaatctgcct
     1321 gccgaatttt tacgcgtcta ttcgccgagt gcggaagtgc gcggacacgg cgtgggacag
     1381 gatgttttgc agaccggcaa ggcggatgtc caaatcgcgg atttgcagcc tgtcggacag
     1441 tacgcgctga aaatcagttt ttcagacggg cacgacagcg gtctttacga ttgggcgtat
     1501 ctgcacagac tggcatacgg atacgatgcg atgtggcagg aatatttgga caaattggcg
     1561 gcggcgggtg cttcccgttt tgaaaagcaa tcagattgtt aagtttggga tgccgtaggg
     1621 cggcatcagg gaggtggtta gaatatgggc ggacagaaaa cgcatttcgg attcagtacg
     1681 gtcaacgaag atgagaaagc cggaaaagtg gcggaagtgt tccactccgt cgccaaaaac
     1741 tacgacatta tgaacgatgt gatgtcggca gggctgcaca gggtgtggaa gcatttcacc
     1801 atcaacacgg cgcacctgaa aaaaggcgat aaagtgttgg acattgccgg cggtacgggc
     1861 gatttgtcgc gcggttgggc gaaacgggtc ggcaaggaag gcgaggtttg gctgaccgat
     1921 attaattcct ctatgctgac cgtcgggcgc gaccgtcttt tgaacgaagg catgattttg
     1981 cccgtgtcgc ttgccgatgc ggaaaaactg cctttccctg acaattattt caacttggtt
     2041 tccgtggcgt tcggtttgcg gaatatgacg cataaagatg ccgcgctgaa agagatgtac
     2101 cgtgttttga aacccggcgg gacattgctg gtattggagt tttccaaaat ctacaaacct
     2161 ttggaaggcg cgtatgattt ctattcgttc aagctgctgc cggtcatggg caaactgatt
     2221 gccaaagatg cggagagtta tcaatatctc gccgaatcca tccgtatgca ccccgatcag
     2281 gaaactttga aacagatgat gctggatgcg ggctttgaca gcgtggatta tcacaatatg
     2341 agtgcgggca tcgtcgcgct gcataagggc gtgaaatttt aaacggactg gctgtgcagc
     2401 caatgccgtc tgaacacgtt tcagacggca tttttgtgtt tttttgagaa agagatttta
     2461 aatcttaaaa ttaattcaca tatccatcaa taatttataa attttttaaa aaataggaac
     2521 aattatcatt tgcaagattg ggagatgtct gtataatgca gtcaatccag taaacaacgc
     2581 agcagacgaa aggagggaaa aatgccggaa agtattttca aacagatttc ccttgatatt
     2641 ttgaaactgc atcgggactc tgtttattcg ctgcttgcca cttccggctg caactgtcag
     2701 gtgcatgaag cggcgtatgt caacatcgac ggcaaatatt atattgcgct ttcatgtgag
     2761 cccgaggtgg gggaagtcaa aacaggcatt ttgctgattg aggatgaaag ccgcaacctt
     2821 cgtttgagct gggtcggcag tgcgcgggaa cttgaccgca aggatagtgt ctataagcgt
     2881 gccttgtccg cgttgtccag aaagctgggg cggtgtaagg acaggctgca tacggcggtt
     2941 caaccgtttt tgttggagct ggtgccggag aaaggcagat tttctgtcgg cgatgaagaa
     3001 gtttggattt ctcgaaacga tttagtgagg gctttatatc ctgtcggata cagtatgcgg
     3061 caggcagtgt tgcagattta aagttttggt agtggtttgt gttccttttg cgcccctttt
     3121 tcaaggggcg attttttttg cgtacagatt ggcggcaggg taaaaatgcc gtctgaaacc
     3181 ggcattcaga cggcatccgc gtgcggaatt acctgtcggg taaaagacgg ataccttgat
     3241 tgcccagccg ttttgacaat tcggcaacct ttccgtgttt tcctaaaaca aaatcaggga
     3301 ggatttctgc caaagggcgg atgacgaaac tgcgttcgtg cgcgcgcgga tgcggcaggg
     3361 tgagtcgggt gtcgtcgctg gagatgccgt caaagtcgat aatgtccaaa tccaatgtgc
     3421 gcggcgcgtt gcggaagctg cgttcgcgtc cgaaatcagc ctcgatacgg ttgagttcgg
     3481 caagcagggc aatgccgtcc agagtggtgg aaacggtgca gacggcattg acaaaatcgg
     3541 gctgattgtc gtaaccgacg ggcgcggtca tatacagtga ggaagcctgt ttaagacgga
     3601 tgtcaggatg ggacgacagc gtgtccaatg cggcgcgtac ctgttgggca gggttttcaa
     3661 gattactgcc cagggcgatg acggcaaaat gtctgttgtt cataacggtg tttcagaaag
     3721 gcaggacttt ggttttggca aggtaaacga tgcaggcgac gcaacacatg gcgagcaggt
     3781 aaacggtgta gaacttggtc gaacgcggac gggcgcgcat catcatcata cccaatgcga
     3841 tataggcgag cagaagcagg atttttgtac cgagccaagg cgcgttgaac ggggagaaat
     3901 gggtaatttt catcagccac aatcccgtaa acagcagcat ggtgtcgtta aggtgtggca
     3961 gtgccttcca aaagcccgcc aagggctttt ctggattttt ccaaagtagg aaaaaacgga
     4021 tgttgaatac caaaatggtg atggtaacga agatttggtg gctgtatttg acaaacagat
     4081 actgcatggt cggctcttat caaaataagg gttggaatcg gcttatttta ccgcaaacag
     4141 ttatttttga cgcagttttt caaatgccaa cagatagggt gggctgtttt tccggttggt
     4201 aaagccgtaa cgtaaaacgg caaactgttc ttgaggcagg ttttttgccc attgtccgac
     4261 ggcttctgcc tcctgtttgc cgttttcgtg tcccggatag aggacggcaa taagcatacc
     4321 gttttctttc agtagggata aggtggcaga aagggcggca atgctggttt ccgtgcgggt
     4381 ggtaaggctt ttgtccccgc cgggcagcca gccgaaattg aaaatggctg catccagcgg
     4441 ctttggaata tattgcttca ggttttcatg tccgtccaag atgaaccgta cattgctgta
     4501 acctgcttcc tgcagacggc atcgggtgtt gttcagggct tgcggctgga tgtcgaatgc
     4561 ccacactttc ccccggatgc ctgcggtttg tgcgaggaaa agggtgtcgt gtccgttgcc
     4621 ggcggtgccg tccagcgcat tgccgccttc gggaagtgcc tgccgcaaaa ggcaatgggc
     4681 gaatggaagg atgtttttca ataacatttt taaatgctgt ctgaaaataa aaatacctta
     4741 ccgatgtcgg taaggtattg aaagatatga cacgtcatgc ttcgcgcgga ttattcggca
     4801 ggctgctgga cggtttccac ttggacaagg gtcgaagccg gtgcggcttg gggtctgttt
     4861 tcgtgttgga ggttgacgga gcgagccggt acgatggtgg aaatggcgtg tttgtaaacc
     4921 atttgggtta cggaagtgtt tctcagaaga acgacgtatt ggtcgaaaga ttcaacctga
     4981 ccttgcagtt tgatgccgtt gaccaggtaa atcgaaaccg gaacgtgctc tttacgcagg
     5041 gcgttcagga agggatcttg caacatttgt cctttagctg tcatattttt aactccgtta
     5101 ttatgattgt gaaatcgggc agacgccctg tgcgtgtcga attgtagcct tgaataggaa
     5161 aaattaccaa ttttttttgt gtttgggcgg ttttccgccg ggcatttgta tgtcaggagc
     5221 gttgctgcag catccacgat tcgattttgc gggcgtcgtt gacgcgtgtg gcggatgtgg
     5281 gcgagttcag caatacgatg gtaacgggtt gattttgaat gttggctttg acaaccatag
     5341 acctgcctgc ttcgcgtatg tagccggttt tctgcaattc gatgttccac atgccttctc
     5401 tgaccagggc attggagttt ttgtagttct gctgcccgtt tttggtctgt accgaggcgt
     5461 agttggaagt cgagttggtg cggatttgcg gatattgggc ggcggcgttg accataaggc
     5521 tcaggtcttt ggcggtagaa acgttttgga agttgagtcc ggtcggttcg taaaagcggc
     5581 tgccgtacat accgaggctt tgggctttgc ggttcatggc ggcgacaaat gcgcccatgc
     5641 cgccggggta ggttctgccc aatgcatggg tggcgcggtt ttcgctgctc atcaggctca
     5701 ggtgcagcag ttctttgcgt gtaagtgccg tacctatggc aagacggctg ccggtccctt
     5761 tgatgcggtc gatttcgtcg ggcgtaatgg taacggtttc gttcatgtcc aagtttgcat
     5821 ccaaaacgac catcgcgctc atcagtttgg aaatggaggc gatgggcata atcctgtcgg
     5881 cgtttttctg atacagtatc tgtccggttt tgttgttgac gaccagggca gactgtgagg
     5941 agagaatcag accgcctgta atggcttggg tgttggtggg gtgtatcgtg ctttcggcga
     6001 atatttctat cggatcggag gaggtaagca tgttctgttc taaaaattgc cctaaaatgt
     6061 cgttgtcggc aaaaaggtgg gctgacggca gggaaaggca gagaccgagc agcagcgatg
     6121 agggcaggcg tttcagagta tggatggaca tttttgattc catatttttg agtattggcg
     6181 ttattttgtt gaaaaaacag ccatctgtaa agtatgtcgt ctgacaggag actgcccgta
     6241 ggcgggcggt cttgttgtgt tttggggatt gggttttata acattctgtt tttaaatcgg
     6301 aacatatagt ggattaacaa aaaccagtac ggcgttgcct cgccttgccg tactatttgt
     6361 actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa tccactatat tttgtggttt
     6421 gacatggata tttttcatgc cgtcgtgtgt cggtttggat gtttccggcg gttgaatcct
     6481 tgtcctttgg ggcggtagaa tcggggttgg tttggcaatt gcggcggtgc gtctgcgtgc
     6541 cgttttgaat aatgggaata tcgggagtag gactatggat gtgaaatatg aatttaccct
     6601 gccttcgagc agcggtgcgg attttcattc ggcagaacat ctgcctttgg tcgtgtattt
     6661 ttatccgaaa gacagtacgc cgggctgtac gacggaaggc ttggatttca atgcgcgttt
     6721 ggaacagttt gaggcattgg gttataccgt ggtcggtatt tcccgcgacg gcgtaaaggc
     6781 gcatcagaat ttttgcgcca agcagggttt ccggttcgag ctgttgagcg acaaggatga
     6841 aacagtgtgc cgcctgtttg atgtcatcaa attgaagaaa ctgtacggga aagagtcgtt
     6901 aggtatcgag cgcagtacgt tcgtcttgaa taaggatgga gaaatcgccc atgaatggcg
     6961 gaaagtcaaa gtggcgggtc atgcacagga agtgttggaa acgctttccc gataatgtga
     7021 accatgccgt ctgaagaaga ttcagacggc atttgtttgg aacggtatgg aagaaggttt
     7081 gatcgacagg ctgcttgaaa cgctgtggtt ggacaggcgg ctcagtcaga atactttaaa
     7141 cggttaccgg cgcgatttgg aaaaaatcgc ccgccgcctg tcccaatcgg gcagaatgct
     7201 gaaggatgcg gacgaagcgg atttggcggc ggcggtttat gttgacggag agcaacggag
     7261 ttcgcaggcg cgcgcattat cggcgtgcaa acgcctgtat atatggatgg agcgtgaagg
     7321 cataaggacg gacaatccca cccgtttgct gaaaccgccc aaaatcgaca agaatattcc
     7381 gacactgatt acagaacagc agatttcccg gctgcttgcc actccggata ctgatacgcc
     7441 acacggtttg cgggacaagg cactgctcga attgatgtac gcgaccggct tgcgcgtcag
     7501 cgaggcggtc gggctgaact tcggcaatgt ggatttggac aggggctgta ttaccgcgct
     7561 gggcaagggc gataagcaga ggatggtccc gatggggcag gagtcggcgt attgggtgga
     7621 acgctattat acggaggcac gcccacttct gctgaaaggc aggaattgcg acgcattgtt
     7681 tgtcagtcag aaaaagacgg gcatttctcg tcagttggca tggatgattg tcaaagaata
     7741 tgcaagtcag gcaggcatcg ggcacatcag cccgcacagc ctgcgccacg cctttgccac
     7801 gcacttggtg cagcacggat tggatttgcg cgtggttcag gatatgttgg gacatgccga
     7861 tttgaatacg acgcagattt acacccatgt tgccaatgta tggttgcagg gtgtagtgaa
     7921 ggaacaccat tcccgaaact gaggcttctg cttcggttta ataagaaatc aatcggaaat
     7981 gaaaacttga taaaaaatta ccaagacaaa ccgtgtatgc cgaccttgca atgcgaaccg
     8041 tttttattta tatttgcata cgataataaa agccgctatc ggtacgatag tttgagaaca
     8101 cacggagcac aaaatgtttg tctgcatctg caatgccgtt accgaccatc aaatcaagga
     8161 aaccatcgcc gccggcgcga ccacaatggg cgatttgcag tcgcaattgg gcgtagcgag
     8221 ctgctgcggc tgctgcgggg agcttgccgc ttcgtttctg acggcgcaca atgcgcaacc
     8281 gacggttacg gcgggtatca acgttcaagc gtaaaacggt tttggaaatg ccgtctgaac
     8341 tgttcagacg gcatttttgc tgtttttggc aggacttgag tatcatcttc cttgaaaaca
     8401 ttgttttttc ccaaatagac catgattctg ctgcgtctaa ggctttggcg tgtgcaaatt
     8461 gacagataag gaaacgcgga tgaaattgac cttgatgttt cgtgaatatt gcagcttgtg
     8521 ccacaaaatg cgcgacgaac tcaaaccttt tcaggatgaa tacgggttcg ggctggaagt
     8581 ggtcgatgtg gatgaaaatc ctgttttgga agaaaaatac aatgaactgg ttcccgtttt
     8641 gttggcggga gatgaggaaa tctgccactg gtttttggat gaggacaggt tgaaacagtt
     8701 tctcgaacgg taaaaaatgc cgtctgaagc aggacttcag acggcatttt tttcaaatca
     8761 acgttcttta cgtttttgcg gggcggatga cctgccagta aaggaagcac gtttggatgc
     8821 ctggtaaatt gtcaatcttc tacggtgttg catattgacc ctttctttat tttatttgtc
     8881 ggttgggaga attcttattt attgattttt tcaataaaaa ttagaaaatt tattgtgaga
     8941 tgttattgtt ggcaatcata tcatgtttta ctgttgatgg aagcatgatt gtgtaaagat
     9001 gatatgtgtt tgtgtaatcg gtagatttta tagtggatta acaaaaatca ggacaaggcg
     9061 acgaagccgc agacagtaca aatagtacgg aaccgattca cttggtgctt cagcacctta
     9121 gagaatcgtt ctctttgagc taaggcgagg caacgccgta ctggtttttg ttaatccact
     9181 atataagaaa accgccaagg cggtgcttga cggcggaaac ggagaggcgg gcggcatcag
     9241 agcagcttgg aaacgacctg cgcaagggct ttttgccagt ctgacggttt gatgccgaag
     9301 tcgttttcga ttttgcggca gtccaaaatg ctgtatgcgg gcctgggggc ggcggtcgga
     9361 tattccttgt ctgaaacggc agtcaattcg ggaacgggga aggatgtctg ctgttgcgat
     9421 gccgcttgga aaatatgttg ggcaaattca taccaggata cggatttgcc gccggcgtag
     9481 tggtaaatgc cgcgcacggg cgacgtttgc tgcaaaaggc ggatgatggc ggcagctaaa
     9541 tcgccggcat aggtcgggca gccgatttgg ttgtggacgg cggacagcgg ggaacgttcc
     9601 cgcgcaaggt tcagcatcgt gcggacaaag ttgtccccgt attcgctaaa cagccaagaa
     9661 gtccgcagga taaggctgtc gggattggca gacagtgcga gcagctcgcc tgcggttttg
     9721 gattgtccgt atacattgga aggattggta aagtcgcttt cctgataggg ccttttccct
     9781 ttaccgtcaa agatatagtc ggttgagatg tggatgaatc gggcatgggc gcgatgtgct
     9841 gccaaggcaa ggttgtaaac ggcggaagca ttgacggcaa atgccgctgc cgcattgcct
     9901 tccgctttgt cgacggcagt ataggcagcc gtgttgacaa tggcgtcggg ttggaaactt
     9961 ttgaccatgt tgcagacggc atcggcatcg gtaatgtcta gggatgcgga atccgtcgca
    10021 atggtttccc agtcttccgg aagacggtcg cgcaggcagc gtgccagttg gcttttcgag
    10081 cctgtcaata ggattctcat gaggtatttc ctttggtaaa agtgtattgt aggacttgct
    10141 gtcggtatta tagtgccaaa actttgccga cggttgacgg gttggttttt tgtgccatgg
    10201 gtattgtttt gcgccgactt cggctagaat attggtttgt gattcaaacc tgtcgggtgt
    10261 cgggtcggta ttttcaagat attttcaggg gggggcgaaa tgagtgagat tggtttggta
    10321 aagatctatt ttggaaaagt gcgcgattta tatgaaatcg acgataaacg tatgctgatg
    10381 gtcgcttccg accgcctgtc tgcattcgat gtgattttgg acgacccgat tccgagcaaa
    10441 ggggagattc tgacgcagat ttccaatttt tggtttaaaa aactggtgca tattatgccc
    10501 aaccacttta ccggtcaaac ggtttacgat gttttgcctg aaaacgaagc caaagcttta
    10561 gagaaacgcg ccgtcgtggc taaaaagctc actccggtga aagtagaggc gattgtgcgt
    10621 ggttatctgg caggcagcgg ttggaaagat tatcaaaaaa ccggctcggt ttgcggtatt
    10681 caactgcctg aaggtatgca ggaagcgcaa caactgcctg aagtgatttt tacgccctca
    10741 accaaagccg cagtcggcga tcacgatgaa aacatcagct ttgaagaatg cgaacgcatt
    10801 atcggaaaag aattggcggc ggaagtgcgc gccaaagcga ttcagcttta tacagaagcg
    10861 gcggaatatg ccaaatcgcg cggcatcatc atttgcgata ccaaatttga attcggtttg
    10921 gatacaaacg gtacgctgac gctgatggat gaggtattga ctcccgattc gagccgtttt
    10981 tggcctgccg accaatacaa agtcggcacc aatccgccgt cttttgacaa acaattcgtc
    11041 cgcgactggc tggaacaaag cggttggaac aaaaaagccc ctgcgccgaa agtgcctgcc
    11101 gatgtgattc agaaaactgt cgagaagtat cgggaagcat tgactttgct gactcaggat
    11161 tgatttttaa gtttgaaggc cgtctgaaag aaatatggtt cagacggcct ttttattgta
    11221 tcaatactgg attttaatga tggttgcctt tataatttgg aattgctttc agcgtccgaa
    11281 atgtcgtctg aaagcttgtt tacaacctgc cgcacggtct gaaaccctaa ctatgcacat
    11341 tcggatttta gtgtgcatta ttagtgtttt agcagtgcgg tattttgaaa ggaacaataa
    11401 tgttcgacaa acacgttaaa actttccaat acggcaacca caccgttact ttggaaaccg
    11461 gcgaaattgc ccgccaagcc gccgctgccg ttaaagtctc tatgggcgac accgtggttt
    11521 tggttgccgt taccaccaac aaagaagtga aagaaggcca agacttcttc cctctgactg
    11581 tcgattacct cgagcgcact tacgccgcag gcaaaattcc cggcggtttc ttcaaacgcg
    11641 aaggcaaaca aagcgaaaaa gaaatcctga ccagccgtct gatcgaccgt ccgattcgtc
    11701 cgctgttccc tgaaggtttc taccacgaca tccaaatcgt agcgatggtc gtgtccgtcg
    11761 atcctgaaat cgattctgat attcctgcaa tgttgggcgc gtctgccgcg ctggtgttga
    11821 gcggcgtacc gtttgccggc ccgatcggcg cggcacgcgt cggttatgta aacggcgtgt
    11881 acgttttgaa cccgactaaa gccgaattgg cgaaatcgca attggacttg gtggtcgccg
    11941 gtacttccaa agccgtgttg atggtggaat ccgaagccaa aatcctgccc gaagacgtga
    12001 tgctgggcgc ggtggtttac ggccacgatc aaatgcaggt tgccatcaat gcaatcaatg
    12061 aatttgccga cgaagtcaat ccggaacttt gggattggaa agcacctgaa accaatgagg
    12121 aactggttgc caaagtccgc gggattgccg gcgaaaccat taaagaagcg ttcaaaatcc
    12181 gtcaaaaaca agcgcgttct gccaaattgg acgaagcttg gagtgcggta aaagaagcct
    12241 tgattaccga agaaaccgac acgctggcag ccaacgaaat caaaggcatt ttcaaacact
    12301 tggaagccga tgtcgtccgc agccaaattt tggacggcca accgcgcatc gacggccgcg
    12361 acacccgcac cgtccgtccg ctgaacatcc aaaccggcgt attgccgcgc acgcacggtt
    12421 ccgcattgtt tacccgtggc gaaacccaag cccttgccgt agcgactttg ggtacttcgc
    12481 gcgacgagca aatcatcgac gcgctgtccg gcgaatacac cgaccgcttt atgctgcact
    12541 acaactttcc gccgtactct accggcgaag tgggccgcat gggcgcgccg aaacgccgtg
    12601 aaatcggtca cggccgtttg gctaaacgtg cattgttggc cgtattgccg aaacctgaag
    12661 atttcagcta caccatgcgc gtggtctccg aaattaccga atctaacggc tcttcctcta
    12721 tggcttccgt ctgcggcggc tgtttgagcc tgctgtctgc cggcgtgcct ttgaaagcac
    12781 acgttgccgg tatcgcgatg ggtctgattc tggaaggcaa caaatttgcc gtcctgaccg
    12841 acattttggg cgacgaagac cacttgggcg atatggactt taaagtggcc ggtacgaccg
    12901 aaggcgttac cgcgctgcaa atggacatca aaatccaagg cattaccaaa gaaattatgc
    12961 aaatcgcttt ggcacaggcc aaagaagcgc gtctgcacat cttggatcag atgaaagccg
    13021 ccgttgcggg cccgcaagag ttgtccgcac acgcgccgcg tttgtttacg atgaaaatca
    13081 accaagacaa aatccgcgaa gttatcggta agggcggtga aaccatccgt gcgattaccg
    13141 ctgaaaccgg tacggaaatc aatattgccg aagacggtac gattaccatt gccgcgacca
    13201 ctcaagaagc cggcgatgcg gcgaaaaaac gcatcgagca gattactgcc gaagtggaag
    13261 tgggcaaagt gtatgaaggc actgtggtga aaatcctcga caacaacgtc ggcgcgattg
    13321 tcagcgtgat gccgggcaaa gacggtttgg tacacatcag ccaaatcgcc cacgagcgcg
    13381 tacgcaatgt cggcgactac ctgcaagtcg gtcaggtggt gaacgtgaaa gcattggaag
    13441 tggacgacag aggccgtgtc cgtctgtcca tcaaagccct gctggacgcg cctgcccgtg
    13501 aggaaaatgc cgccgagtaa cgcttagggt gaaagtgccg tctgaacagg tttcagacgg
    13561 tattttttac gggtatcggg aatgaatggg gcttacagcc acaggacggc aagtttccat
    13621 aatgcccata atgatacgga taatcccgta cacaggcgga tatatcggtt ttgcatgatt
    13681 tttttcagtt gcagggaaaa aatgccgatt gccaaaagat tgggcagcgt acccagtgca
    13741 aaggcaagca tatataaccc gcccgttgcc gcactaccgc ttcccagcgc gtaaagcgac
    13801 gcgctgtaaa ccagtccgca cggcagccag ccccataata ttccgaccgc aaggcaggcg
    13861 ggtatggatt ttatgggtaa cagccggttg agtatcgggt tcaggttccg ccatatcggt
    13921 ttgccgattt tctcgatttt tgccgccaag gaagaaatac cgctcaagta taagcccaaa
    13981 aagagcagca ggaggttggc ggccgtgtat aaaatattct gcaggacgcg ggtttggtcg
    14041 agtgaaacgc cgacctgtcc gattaatccg agtatcaggc cgattgccgt atagctgctt
    14101 acccgtcctg tgttaagcag caggatcagc caaaatcggt tgatatgcgg ggggagttgg
    14161 agcgcaaacg cgctgcttaa tccgccgcac ataccgatgc agtgcgttcc gccgaagaaa
    14221 ccgagtagga acagggtgag gaaagtgatg tcgtggttca taggcagttt gaagtcaaat
    14281 atttttcggg aaaagggatg atttgcggca gtccggcaca taggatccgc cgagggcatt
    14341 gcccgtgctg ttaaagtctt gaataaggat gcagtttgca ccctgtattt cgataatttt
    14401 gtaaaatccg ccctttactg cgccgtcggc gggtttgccg tgtgcgtcaa aatacaggat
    14461 ggtgcggttt tgaagatgcg cgcaatttga aacggcgggg cttgccggta tgtttcgggc
    14521 gcaggcggca aggattgcac aagggaaaag caacagtaat atgcggaaca tggtgtttct
    14581 tgtaaggggt aacaaacagt ataatggctg attttaatcc tcaggcggcg ggagatggaa
    14641 gcatttccct tcggtgcggg ggatttcgga ttcggaagca acagacgata cgggatttcg
    14701 gaacaatatg aacactttga aatttaccaa aatgcacggt ttgggcaacg attttatggt
    14761 gattgacgcg gtcagtcagg attttacccc cgaggacgcg ccgattgcgg catgggcgga
    14821 ccgcttccgg ggcgtgggct tcgaccagct tttggtggtc gggcgttcgg aaaccgaagg
    14881 cgtggatttc cgttaccgta ttttcaatgc cgacggtagc gaggtcgagc aatgcggcaa
    14941 cggagcgcgt tgttttgccc gttttgttgc agacaagggt ttgaccgata agaaagaaat
    15001 ttgtgttgaa acggcaaatg gcgttatttt tccgaaattg tccgataacg gcatggttac
    15061 ggtcaatatg ggcaaaccga ggtttatgcc gtctgaaata ccgtttgtcc ccgaatcggg
    15121 cgagggggat gatgcctgta tttacggggt gcatctcgaa tccggcattc agcctgtcag
    15181 ctgcgtcaat atgggcaacc cccatgcggt gattgtggtc gatgacgtag aatgcgcgcc
    15241 ggtgcgcgaa accggttcgc ttatcgaacc gcacaggcag tttcccgaac gcgtcaacgt
    15301 cggctttatg cagattgtca gccgaaccgc gattcgtttg cgcgtgttcg agcgcggcgt
    15361 gggcgaaacc caagcgtgcg gtacgggcgc gtgtgcggct gtggtggcgg gtatccgtct
    15421 ggggttgttg gatgaaggga aaacggtaga ggtgattttg ccgggcggga ctttatatat
    15481 cgaatgggcc tgcggcggcg atgtgatgat gaccggccct gcggaagcgg tgtttgaagg
    15541 cgagttggcg tattcatgat tttgctgcat ttggattttt tgtctgcctt actgtatgcg
    15601 gcggtttttc tgtttctgat attccgcgca ggaatgttgc aatggttttg ggcgagtatt
    15661 atgctgtggc tgggcatatc ggttttgggg gcaaagctga tgcccggcat atggggaatg
    15721 acccgcgccg cgcccttgtt catcccccat ttttacctga ctttgggcag catatttttt
    15781 ttcatcgggc attggaaccg gaaaacggat ggaaacggat ggcaggcaga ccccgaacat
    15841 cctctgctcg ggctgtttgc cgtcagtaat gtatcgatga cgcttgcttt tgtcggaata
    15901 tgtgcgttgg tgcattattg cttttcggga acggttcaag tgtttgtgtt tgcggcactg
    15961 ctcaaacttt atgcgctgaa gccggtttat tggttcgtgt tgcagtttgt gctgatggcg
    16021 gttgcctatg tccaccgctg cggtatagac cggcagccgc cgtcaacgtt cggcggctcg
    16081 cagctgcgac tcggcgggtt gacggcagcg ttgatgcagg tctcggtact ggtgctgctg
    16141 ctttcagaaa ttggaagata atacggtgcg gccgtatcgg aacaaaaagt tataaagaaa
    16201 gaaattttgg atattggttt tttaggcggc ataggtttag gataaagcca tatccgaaat
    16261 ttgtttatgt ttcggcgcaa atcccctgca atcggacagg atgcctatgg ggattgcgcc
    16321 ttactgtcga aaccttatta ttcaggagca gaagatgaaa attgcaaaca gcatcaccga
    16381 actaatcggc aacacgcctt tggtcaaact gaaccgtctg accgaaggtt tgaaggcgga
    16441 ggttgccgtg aaactggaat ttttcaatcc aggcagcagc gtcaaagacc gcattgccga
    16501 agcaatgatc gagggtgccg aaaaagcggg caaaatcaac aaaaacaccg tcattgtcga
    16561 agcaaccagc ggcaatacgg gtgtcggttt ggcaatggta tgtgccgcac gcggctacaa
    16621 gctggcgatt accatgccgg aaagcatgag taaggagcgc aaaatgctgt tgcgcgcgtt
    16681 tggtgcggag ctgattctga cccctgccgc cgaaggtatg gcgggcgcga ttgccaaagc
    16741 gaaatccttg gtggacgcgc atcccgacac ttattttatg ccgcgccagt tcgacaatga
    16801 ggcaaacccc gaagtccacc gcaaaacaac cgccgaggaa atttggcggg atacggacgg
    16861 caaagtcgat gtcttcgttg ccggcgtcgg cacgggcggt acgattaccg gcgtgggcga
    16921 agtgttgaaa aaatacaaac ccgaagttaa agtggttgcc gtcgagcctg aagcttcacc
    16981 cgtattgagc ggcggcgaaa aaggcccgca cccgattcaa ggcatcggcg caggctttat
    17041 tccgaccgtt ttgaatacca aaatttacga cagcattacc aaagtgccga acgaagcggc
    17101 ttttgaaacc gcccgcgcaa tagcggaaaa agaaggcatt ttggtgggta tttcttccgg
    17161 tgcggcggtt tggagtgcgt tgcagcttgc caaacagcct gaaaacgaag gcaagctgat
    17221 agtcgtgctg ctgccttctt atggcgaacg ctatctctct acgccacttt ttgcagattt
    17281 ggcataatgc tttaatcgga ttgtcgaaac attcagacgc atttttcggt atcggtgtaa
    17341 cgccgtgccg gaaaatgcgt ttttgcgtat atgccgaaaa cgccggttgt gttttaatca
    17401 ggtgttggtg tcgctgcatc gcttgaggga aatatttttt atagtggatt aacaaaaatc
    17461 aggacaaggc aacgaagccg cagacagtac aaatatagtg gattaacaaa aatcaggaca
    17521 aggcaatgaa gccgcagaca gtacagatag tacggcaagg cgaggcaacg ctgtactggt
    17581 ttttgttaat ccactatagt acggaaccga ttcacttggt gcttcagcac cttagagaat
    17641 cgttctcttt gagctaaggc gaggcaacgc tgtactggtt tttgttaatc cactatattc
    17701 gggttttatc cggcaggacg gttttttgcc ccaacggaaa atagtcggcc tgcccgtaaa
    17761 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
    17821 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
    17881 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
    17941 gcagtctgat tgtcagatcc gtccccgtcg gttcgtatgc aatcgcattt tggcggttgc
    18001 tgatttcggt gttcgtattt tggtttttag cacggttttt caggcaaaaa ttcccaaaaa
    18061 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt tctcgctttc gatttggcgt
    18121 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
    18181 aaatcttttt cttgtcggca atcggtgttt tctttttcgg cgagcgtttg agcgggctga
    18241 aaaaggcagg cttaatatcg gcagttgccg gcgtggcgat gattgccggt gcggaattcg
    18301 gctacaacgg taatgcggtt tggggattcg tcagcggttt ggtatcggga ctgatgctcg
    18361 ccctgtcgat ggtgttcgtc cgcaaaaccc atgaaatcga gacggtggcg cttttccctt
    18421 caatgatgat tttgagtttg ggcggcgcgg tatcgctggt tgttccggca ttgctgatgg
    18481 atggcggcgc gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
    18541 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
    18601 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
    18661 ggttgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
    18721 tttacctcgg ttcgctgaaa cagcagtccg agccttgact ccgtccggca tcagattttc
    18781 tgccgtggca aacctgcgta cgattgaact ggcaggcagt caaaaccggc aagaccaaac
    18841 acgccagcaa cggcgcggag cggaaaatgc cgtctgaagc cctttcagac ggcatcgggg
    18901 cgggcagaat caaaaaagcc gcctccgctg gaatggcaat gcaactaaaa taatgtccgt
    18961 atttccatat gccgcccaca ccgtcagtcg gacgaaatgc cctttattca atgggatggg
    19021 tttccacaca aacggaaata tagtggatta aatttaatcc actatattat ccccgaggct
    19081 gccggcaggg aaacaaggcg tttgatgata aaaatgccgt ctgaaacagg gttcggatgg
    19141 catttttgat gttccggcgt aattttccgg cctaacggat tgccgtaccg gccctgccga
    19201 aatcgccgaa gttcatcaaa atgaacattg ccttgccgac aaccagcttg tcatccacaa
    19261 atccccagta gcgcgaatcg gcactgttgt cgcggttgtc gcccatagcg aaatagcgtc
    19321 cttcgggaac tttgcacacg aaaccgctgc cgtcgtcggc atattggcag tgttccaaac
    19381 cgctttgctc tatggaatat ccgttttcag acataatatc ggaggtatat ttgcccaata
    19441 cgggcaggga aacggcaggc tgtccttctt ttttcagaat attgaaggat ttgccgtcca
    19501 aaccgctgtg gaacatatcc gtattgtgga tttcggatgg gtcggtgtcg tcgggataac
    19561 ggtatgtgcc gtcaggaata tcggaagcag gttttccgtt taccgtcaaa actttattcc
    19621 gatattcgac cacatcgccc ggaatgccga caatacgctt gatgtaggtc atctccggtt
    19681 gcaaaggata attaaaaacg accacatcgc cccgttcgat tttgcctgta ggaataaata
    19741 tattgtttaa aacgggtacg cgcaggccgt aggaaaattt gccgaccaaa atgaaatcgc
    19801 ccttaatcag gcccgggcgc atcgagctgg acgggatttg gaacggttcg gcaataaacg
    19861 accggatgag gaacaatacc aaaacggtag ggaagaaact gccgaaataa tcgccgaagt
    19921 ggctgctttc cgagatttcg ggatgagtct tcaggcggta tttgtatacc ccccaagccg
    19981 taccgcacaa tacaacgaaa atcaggaaaa cggcggtaaa gctcataaac agggacaaag
    20041 cggcaaacac gccgaccgcc gtcaggatat aggcgtattc cagaccggaa ctccattcac
    20101 cgttttcctg ccgctttttg tcgcttttga aataaaggat gatgccggca agcagcgcgg
    20161 cagccgcgcc cgacattagc attgtgttca ttgttgttcc ttaatgctta aaaacccgcc
    20221 tgtccgtgca accgttttaa ggcggcaaat tgcaaaattt gtttgcgggc gcgtgcccct
    20281 gaaatcaggg cggtttgagg ggtgttcccg acgcgccgcc ctgtgtgcca gagttatttg
    20341 tcgctcacct gcaaaatcgc caagaacgcg ctttgcggaa tttccacatt gcccacttgt
    20401 ttcatacggc gtttacctgc cttttgtttt tcaagcagtt ttttcttacg cgtaatatcg
    20461 ccgccgtaac atttcgccaa aacgttttta cgcagggctt tgacgttttc gcgggcgata
    20521 atctggctgc cgatggcggc ttggacggcg atgtcgaaca tttggcgcgg aatcagctcg
    20581 cgcatttttg atgccagctc gcggcctcgg tgaaccgcgc tttgacggtg cacaatcagg
    20641 cttaatgcat cgactttttc gccgttgacc ataatatcca gcttaatcaa atcagacggt
    20701 tggaactctt tgaaatggta gtccaacgaa gcataaccgc gcgaagtgga tttgagtttg
    20761 tcgaagaagt ccatgacgac ttcgttcatg ggcaaatcgt aagtcagcat gacttggcgg
    20821 cccatgtact gcatattgac ctgaacgccg cgcttttggt tacacaaagt catgacgttg
    20881 ccgacgtatt cctgcggcac aaggatggtc gcggtaataa tcggctcgag tatggtttcg
    20941 atgctgccga tgtcgggcag tttggacggg ttttcaactt cgattttttc gccgcttttc
    21001 aacacgactt cgtaaaccac cgtcggcgcg gtggtaatca aatccatatc gaactcgcgc
    21061 tccaagcgtt cctgcacgat ttccaagtgc aacagaccca agaagccgca acggaagccg
    21121 aagcccaatg cctgggaaac ttcaggctcg aatttcaacg aagcgtcgtt aagctgcaat
    21181 ttttccaaag cgtcgcgcaa ggcttcgtag tcgtggcttt ccacgggata aagtccggcg
    21241 aatacttggc tttgtacttc ttggaagccg ggcagcggct cagtggcagg gttggcaacc
    21301 agtgtaaccg tatcgccgac tttcgcctga cccaattctt ttacgccggt aatcaaaaag
    21361 cccacttcgc cggctttgag ttcttgtttt tgaaccgatt tcggtgtgaa tacgcccaac
    21421 tgctcaacct gcgtttccgc cttggtgctc ataaagcgca ctttgtcttt cagtttgatg
    21481 gtgccgtttt tcactcgaat cagcatgacc acgccgacgt agttgtcaaa ccacgaatcg
    21541 acaatcacgg cttgcagcgg cgcgttttca tcgccggtcg gcgcaggaat tttggcaacg
    21601 atttcttcca aaacgtcttc cacgccgatg ccgcttttgg cggaacactg caccgcgccg
    21661 accgcatcga tgccgatgat gtcttcaatt tcctgctcca cgcgttcggg gtcggcggct
    21721 ggcaggtcga ttttgttcaa aacaggcaca acctccacgc ccaaatcaat cgcggtgtaa
    21781 cagttcgcta cggtttgcgc ttccacgccc tgcgacgcgt caacgaccaa aagcgcgcct
    21841 tcgcaagccg acagcgaacg ggaaacttcg taagagaagt cgacgtgtcc cggcgtgtca
    21901 atcaaattaa gctgatacac ctgcccgtcg cgcgctttat agttgagcgc ggcggtttgc
    21961 gctttgatgg taatgccgcg ctctttttcg atgtccatgg aatcgagtac ctgcgtactc
    22021 atttcgcgca aatccaaacc gccgcaatat tggatgaagc ggtcggcaag cgtcgatttg
    22081 ccgtggtcga tgtgggcaat gatggagaaa tttcggatat ttttcattag agttgttttg
    22141 aatgtcggac agtgggtttg ggaaatgccg tctgaacaaa cggcgttgcg tccgaatatc
    22201 gggtgcaacg tggaaatagc ccgatattct aacggaaaac cgctgttttg gcatgatttg
    22261 ataaaggttt tataaagatt tgacgatttc tgccaccatt tttgcagaac ttgccgccgc
    22321 cgttttcaaa aattcgtcaa agctgatgtc tgccttttcg tccgccgaat cggaaaccgc
    22381 gcggatgatg acgaaaggcg tttccaactg atgacaggtt tgggcaatcg ccgccgcttc
    22441 catttccact gctttgactt tggggaagtg cttgcggatt tccgccacgc cttcgctgct
    22501 gtggacgaag cggtcgccgc tgacaatcag gccttgttct accgccgcgc cttcaaacac
    22561 ttccgccgcc tgttttgctt tgccgaccaa gaggccgtct gaaacaaata cggcgggcag
    22621 ttgcggcact tgtccccaaa catagccgaa tgcggttaca tcgacatcgt ggtgcgcgat
    22681 ttctgtgccg accacgacat cgccgacttt caaacccttg cccaagccgc ccgcgctgcc
    22741 ggtgttgata acgcagtccg gtgcgaattg atggataagc caagccgttg caaccgccgc
    22801 gttgaccttg ccgatgccgc tcaatgcaag caccatgcgt tttcccgcta attcgccttc
    22861 ataggcggca aacttgccga aagagacggc tttgacattt tccatcatct cgcgcaaaag
    22921 ctcgatttct tgttccattg cgccgataac ggctactgtt ttcaaagaca tattgctgac
    22981 ctgttgtgaa tttcggatag aatgcctgat tatacacgct aacacggcag gattgagtgg
    23041 aggtggtttg tccgtgccgt ctgaaacggt ttcagacggc acggcgggtt tttggtagaa
    23101 tgggaaggta cagattgttt gaagattagg ggacgaggat gtttaccgat gaaaatatga
    23161 ccgcaaagga agaactgttc gcatggctgc gccatatgaa caaaaacaaa ggttccgacc
    23221 tgtttgtgac gacccatttc ccgcccgcaa tgaagctgga cggcaaaatc acccgcatca
    23281 cggacgaacc gctgacggcg gaaaaatgta tggaaatcgc cttttcgatt atgagtgcga
    23341 agcaggcgga agaattttca tcgaccaacg agtgcaactt cgccatcagc ctgccggaca
    23401 ccagccgctt ccgcgtcaat gcgatgatac agcgcggcgc gacggcgttg gtattccgtg
    23461 cgattaccag caagattccc aagtttgaaa gcctgaacct gccgccggtc ttgaaggatg
    23521 tcgcgctgaa aaaacgcggg ctggttattt ttgtcggcgg caccggctcg ggcaaatcga
    23581 cttcgcttgc ctcgcttatc gattaccgca atgaaaattc gttcggacat atcatcacca
    23641 tcgaagaccc gatcgagttt gtccacgaac acaaaaactg catcatcacc cagcgcgagg
    23701 tcggcgtgga tacggaaaac tggatggcgg cgttgaaaaa cacgctgcgt caggcgccgg
    23761 atgtcatcct tatcggcgaa atccgcgacc gcgaaacgat ggactacgcc attgcctttg
    23821 ccgaaacggg gcatttgtgt atggcgacgc tgcacgccaa cagcaccaat caggcactcg
    23881 accgcatcat caactttttc cccgaggagc ggcgcgaaca attgctgacg gatttgtcgc
    23941 tcaaccttca ggcgtttatt tcgcaacgcc tcgttccgcg agacggcggc aagggcaggg
    24001 tggcggcagt cgaggtgctg ctcaattcgc ccctgatttc ggagttgatt cacaacggca
    24061 acatccatga aatcaaagaa gtgatgaaaa aatccactac cctgggtatg cagaccttcg
    24121 atcaacacct ttaccaattg tatgaaaaag gcgatatttc cctgcaagaa gcattgaaaa
    24181 atgccgattc cgcacacgat ttgcgtttgg cggtacagtt gcgcagccgc cgcgcgcaaa
    24241 gttccagccc cgatttggaa ctgctctgat ggcggtatgg atttccggac ggatggtttg
    24301 aaatgattta tccgtggcat aatgagcaat ggcggcagat tgcggaacat tgggagcgtc
    24361 gtcccaatgc atggctgttt gccggcaaaa aagatacggg gaaaactaca tttgcccgct
    24421 ttgcggcgaa ggcactgttg tgcgaaaccc ctgcaccggg ctgcaaaccc tgtggcgaat
    24481 gtatgtcctg ccatctgttt ggacagggaa gccatcccga tttttacgaa atcaccccct
    24541 tgtcggacga acccgaaaac ggacgcaaac tgttgcagat caaaatcgat gccgtcaggg
    24601 aaatcatcga taatgtgtac ctgacttcgg tacggggcgg tttgcgcgtg attctgattc
    24661 atcctgcgga aagtatgaat gtccaagccg ccaacagttt gttgaaagtg ttggaagaac
    24721 cgccgccaca agtggtcttt ttgctggtca gccacgcggc ggacaaggtt ttaccgacca
    24781 ttaaaagtcg ctgccggaag atggttttgc ccgctccttc gcatggggaa gcattggcat
    24841 atctgcgcga caggggtgtg gcggagccgg aagaattttt ggcgttccat tcgggtgcgc
    24901 cgctgtttga tgaggcggac ggtgtccgtg cgttgcggat taaactgttg gatattttgg
    24961 cagaaccaag gttgttgaag attttggatt acgccgcgct tttcgataag gagaaacttc
    25021 cgctcgacgt atttgtcggg tggatgcaga aatggctggt cgatttggga ttgtgcctgc
    25081 aacacatgaa acccgtctat tatcccgctt atgaagacag gctgcttcag acggcatccg
    25141 gtttccgccc gcgcaatgta tttgcggcgg aggatatgct caaacagctt gccccttacg
    25201 ggtttcatac tttaaatgtc aaaatgcaga tcgagcatct gctcatcaat tatttggaat
    25261 tgaagaaaga gaacgggtga attatgtcag acggacaaaa tattccggca aaaatgatgt
    25321 cgttgcagct gaaagacatg aatctgctgt acagctccta tatgccgttt ttggaacacg
    25381 gcggtctgtt tgtgcagacc aacgacgtat tttccatcgg ggacgatatt ctgcttgccg
    25441 tagaaatcct caacttcccc aaactgttcc tgccgaccaa agtcgcctgg atcaatcctg
    25501 cgcgtacttc ctccaaaccc aaaggggtgg ggctggcatt cacaaaacac gaaaactgcc
    25561 tgaaagtcaa agaccagatc gaagtcgaac tgggcaacac aatcggcggc agcagaccta
    25621 cgtttaccat gtaacgccat gcatatcatc gattcgcact gccacctcaa ttttgaaggt
    25681 ttgaaagaac gcctgcccga agttttgtcc aacatggaag caaacggcgt ggggcaggtg
    25741 ctcgccatca gcgtcagtag ggaaagcttc tccgaagtct ttgccatcgc cgaagcgcac
    25801 gaacacatct attgcaccat aggcgtacat cccgacagca aggaagccga agaattttct
    25861 attgcggaaa tggttgctgc agccgcccat ccgaaagtgg tcggcattgg cgagacgggc
    25921 ttggattatt actggtgcaa aggcgatttg tcctggcaac acaaacgctt tgcagaccac
    25981 atcgaagcag ccaatcaaac cggactgccc gttatcgtcc atacgcgtga tgcggcggcg
    26041 gacaccttgt ctatcctgaa agaatgccgg gttaattcgg gcgttatcca ctgtttttcc
    26101 gaagacacag cctttgcccg ggctgccatg gatttggggc tttatatttc tttctcggga
    26161 atcgttacct ttaaaaatgc ccccttggtt caggaggcgg cgaaatatgt gccggacgac
    26221 cgcattttgg tggaaaccga tgcgccgttc ctcgcccccg ttcccaaacg cggcaggcag
    26281 aacgaaccgg cttttgtgcg ctataccgcc gaacatatcg ccaaattgcg gaaccaaaca
    26341 ttggaacagg ttgcggcata tacgacggaa aacttttacc ggctgtttaa aaaagtaccc
    26401 gatatgcggg tcgtctgacc ctgtaccgac gataaggaaa accatgaagg caattcatcc
    26461 gtatgcatgt ccgcgctgct gccggctgcc tgccaacacg tttcggacag gcatggcaaa
    26521 ttccgcttcc aaattctgca ttgccaaagg cggcagacgg gaagtaaaaa aagacgaaag
    26581 cggcggcgga tatgccctgt gccatttgcc ggacagcagg attgtcgagg agtgggaata
    26641 tttccgttca caacattgat actgcgcgat atacggcaaa tattgtggga agtttccgct
    26701 tttgcgtata atgcgtccta cctgacaaat tttgtcaact ttatcaaaag gaataagcga
    26761 tggcttccat ccacgaccaa attaaagaag tagtaacgac acaccgcgtc gtattgttta
    26821 tgaaaggtac gaagcagttt ccgcaatgcg gtttctcttc ccgcgccgtg caaatcctga
    26881 acgcggcagg ctgcaccgat tacgttaccg tcaacgtatt ggaaaatccc gaagtacgcc
    26941 aaggtattaa agaatacagc gactggccga ccatccccca actttatgtg aacggcgagt
    27001 ttgtcggcgg ttcggacatc ctgatggaaa tgtatgaggc aggcgagctg caagagctgc
    27061 tgaaagcctg atggattcgg caatgccgtc tgaacgtgtt tcagacggca ttttcttttc
    27121 cggcaaatca aaaaaaagta taatggcgcg tctcaaaatc acactggaac accgcgatga
    27181 acgttaacgt tatcaaccat ccgctcgtcc gccacaaatt aaccctgatg agggaggcag
    27241 attgcagcac ctacaaattc cggacgcttg ccatcgagct ggcgcgcctg atggcatacg
    27301 aggcaagccg tgattttgaa atcgaaaaat accttatcga cggatggtgc ggtcagattg
    27361 aaggcgatcg catcaagggc aaaacattga ccgtcgttcc catcctgcgt gcaggtttgg
    27421 gtatgcttga cggcgtactc gacctgattc cgactgccaa aatcagcgta gtcggactgc
    27481 agcgcgacga ggaaacgctg aaacccgttt cctacttcga gaaattcgtg gacagcatgg
    27541 acgaacgtcc tgccctgatt atcgacccga tgctggcgac gggcggttcg atggtggcaa
    27601 ctatcgacct gttgaaagcc aagggctgca aaaacatcaa ggcactggtg ctggttgccg
    27661 cgcccgaggg tgtgaaggcg gtcaacgacg cgcatcccga cgttacgatt tacaccgccg
    27721 cgctcgacag ccacttgaac gagaacggct acatcatccc cggcttgggc gatgcgggcg
    27781 acaagatttt cggcacgcgc taactgactg attttcggat ttgatatgaa tttccaagac
    27841 tatctcgcca catttccttc aatcgaccat ctgggcggtt tggacgttca ggatgccgac
    27901 ggcaaaacgg ttcaccacat tcccgccgtt cagggtaagc tcggttcgct caagctgtac
    27961 aatgctttgg cagaacgttt tgacggaaaa ttggacaaag aagcggcaga acagggtttg
    28021 atatggtttg ccgaacacgt tgccgacgcg cgcgcccatc ccggcaagca tcccaatatc
    28081 gacctgcttg aaaaagttgt gcaaagcggc gaaaccttgc tgctcaagcc gcttgccgcg
    28141 caataatttt cgaccatgcc gtctgaaatc cgtttcagac ggcattttgt cggaaagaag
    28201 accgtaaaac gggcattttc ttttctattt caggatacgg gcaatgatgt ttcaacacac
    28261 aggacgacac ataaagcgtt gccctatgtg ttgccctaat ttggaagggg ttacacccct
    28321 ctcaaataaa atctgatgct gctgccacga aggacggatg tccgagtggc ggggtttcaa
    28381 ccattaagga aatacgatga aaaaaatgtt cctttctgcc gtattgcttc tgtcggctgc
    28441 cgcccaaacg gtgtgggcgg atacggtgtt ttcctgtaaa acggacaaca acaaatatat
    28501 agaagttcaa aaaatcaacc gcaatcttta cgaatattcg ttcggcagtg cggcaaaaaa
    28561 agaaattgcc atacgcaaca gcaaagctga tctgtcgggg cgttccgaca ggtggcaagg
    28621 tatgggcagc ggtcgttggg caacgatgaa attccaaaac ggcgaattta tgtacaccat
    28681 atggacaggc ttcgattccg tgactcatac ggaaagcagc ggtgtcgttg tggagcgtag
    28741 gggcaaggaa gtcgcacggg tcggctgtac gccgcaaacc gcgcaggcga atttcaacga
    28801 tgctgatttt tcccggtaat cggggcggat aaggcgatgg aaacagcgaa acccatcatg
    28861 ctgattgtcc gaccgtcggg cagggcgaag gacgatgtgg aaacctgccg tcgtgccgga
    28921 tggcaggcgg aagtgttgag cccgattgaa atcgaagcag atgctgccgg actggaactt
    28981 ttgtccgaac aatatgcccg tgcggatgcc gtgttttggg tcagtccgac cgccgttgaa
    29041 accgccgtcc cgtaccttaa cctttcagac ggcataaaga tacacattgc cgtagggcag
    29101 ggcagccgcc gcgcattgga acgctatttg ggcagaacgg tcattgcgcc tcatgacgga
    29161 aacgacagcg aggcggtttt gcgcctgccg gtttggaaca gtctgcccga aggtgcacgc
    29221 gtattgtttg tgcgcggaca cggcgggcgg gattttctga tgaatgcctt gcaggagaaa
    29281 ggttttcgga cggagatggc agaagtctat ttcagacggc ataaaccttt gaactttcaa
    29341 aatttccaaa ccgaaaatat tgccgccgcc tatattacgt cgaccgagct ggtgcgcttg
    29401 ctgttcgggc agcttccgcc gcaattttcc cgattcttca aatccttgct atactttacc
    29461 catcatccgc gcattgcgga ggcattgaag cgcgaaggcg tgtgttcggt cgaaaccgtc
    29521 cctacgctgg aagccgcgct ttcccattct tccatttccg tttcagacgg catggtcttt
    29581 cccggaacct caaattaata aggagcaaaa cggtgggcga acctgaaaac aaatcatccg
    29641 aacccgtacg cgagatacag gcatcaaaag aaatgccgtc tgaaacctct tccccacgca
    29701 aagaaaacga aacagaagta cacattcctg ccgctccttt tatcgtcaaa cagtccggca
    29761 gcaacgcttt ggcagtctgc gccctggtat tggcggcatt gggtttgggt acaagtggtt
    29821 ttttgtttgt ccaaggacag aatgtcttga aaaaccaaga gctggcattc aaccaaaaaa
    29881 tcgacaaagc cgctttgggc gagtcggaaa acgccgccct gctcaaagac aacctcaacc
    29941 ggcaagccgc catacaatca gagctcgacc gtttggacgg aaacgtcaaa gcaaacggcg
    30001 aacaaatctt ggaaatgcaa aaatcctatc gcgagttgac caaaggacgc gccgattggc
    30061 tggtggacga aaccgagacc atactcaatc tggcggcgca acagctggtg ttgactggca
    30121 atatccaaac ggcagtcggc gtattggagc atatcgacag ccgcctgtcc cgtttcaatc
    30181 aggcagagct tctgccgatc aagcaggcgg tcagcagcga cttggcggaa ctgaaaaacc
    30241 gtccctatgt cgatatttcc ggcacggcat tgcgcctcga caggctggaa atcgccgtat
    30301 ccggactgcc gctgattttg gacggcgtat tgaaaccgag cgtacaggca cgcaacgaag
    30361 ccgtttccgc ttcatggtgg cagaacgtat gggaaaaatc cctcggcaca ttgaaggggc
    30421 tggtcgaaat ccgccgtttg gaaaacaacg atgccatgct gatttctccc gaacaggcct
    30481 attttgtgcg tgaaaacctg cgtctccgcc ttttggatgc gcggactgca ttaatgcagc
    30541 gcaacagcga agtctatcag ggcgatttga acaatgccga aaccgccgtc agacagtatt
    30601 ttgatgccaa atcccccgcc acgcagtcgt ggttgaagga attggcggaa ttgaaggcgt
    30661 tggatgtgcg catgacggcg gatgacggtt tgaaaaacag cctaaatgcc gtccgcgcct
    30721 atcgcgacgg tacgcgcatg acgacggcgg aaaatcaaga agcggaacag gcgacttccg
    30781 aaccggcaaa cgaaaacaca gcttccgaac cggctgccgc atcggatgtg aagaccatag
    30841 aagcaccgtc cctgccttcg gaacgcaaac cggaacagcc tgcaaaaaaa cagcccgtac
    30901 cggaaaaggc agggcgttcg ccgtccgcta aaggagaacg cgcatgaaaa cggtagtctg
    30961 gattgtcgtc ctgtttgccg ccgccgtcgg actggcactg gcttcgggca tttacaccgg
    31021 cgacgtgtat atcgtactcg gacagaccat gctcagaatc aacctgcacg cctttgtgtt
    31081 aggttcgctg attgccgtcg tggtgtggta tttcctgttc aaattcatta tcggcgtatt
    31141 caatatcccc gaaaagatgc agcgtttcgg ttcggcgcgt aaaggccgca aggccgcgct
    31201 tgccttgaac aaggcgggtt tggcgtattt tgaagggcgt tttgaaaagg cggaactaga
    31261 agcctcacgc gtgttggtca acaaagaggc cggagacaac cggactttgg cattgatgtt
    31321 gggcgcacat gccgccgggc agatggaaaa catcgagctg cgcgaccgtt atcttgcgga
    31381 aatcgccaaa ctgccggaaa agcagcagct ttcccgttat cttttgttgg cggaatcggc
    31441 gttgaaccgg cgcgattacg aagcggcgga agccaatctt catgcggcgg cgaagatgaa
    31501 tgccaacctt acgcgcctcg tgcgtctgca acttcgttac gctttcgaca ggggcgacgc
    31561 gttgcaggtt ctggcaaaaa ccgaaaaact ttccaaggcg ggcgcgttgg gcaaatcgga
    31621 aatggaacgg tatcaaaatt gggcataccg ccgccagctg gcggatgctg ccgatgccgc
    31681 cgctttgaaa acctgcctga agcggattcc cgacagcctc aaaaacgggg aattgagcgt
    31741 atcggttgcg gaaaagtacg aacgtttggg actgtatgcc gatgcggtca aatgggtcaa
    31801 acagcattat ccgcacaacc gccgccccga gcttttggaa gcctttgtcg aaagcgtgcg
    31861 ctttttgggc gaacgcgatc agcagaaagc catcgatttt gccgatgctt ggctgaaaga
    31921 acagcccgat aacgcgcttc tgctgatgta tctcggtcgg ctcgcctacg gccgcaaact
    31981 ttggggcaag gcaaaaggct accttgaagc gagcattgca ttaaagccga gtatttccgc
    32041 gcgtttggtt ttggcaaagg tttttgacga aaccggagaa ccgcagaagg cggaggcgca
    32101 gcgcaacttg gttttggcaa gcgttgccga ggaaaaccga ccttccgccg aaacctgttg
    32161 aaaccttcag acggcatcgt tgaaatgccg tctgaaaacc atttcacttg acaaacagac
    32221 tgacagaaaa cccgtatgac tcttttaaaa aacgatacct tcctccgcgc cctgcttaaa
    32281 cagcccgtcg aatacacgcc gatttggatg atgcgtcagg cggggcgtta tctgcccgaa
    32341 tacaaagcca cacgcgcgaa agcgggcagc ttcctcgatt tgtgcaaaaa caccgaattg
    32401 gcgaccgaag ttaccatcca acctttggaa cgtttcgatt tggacgcggc gattttgttt
    32461 tccgacatcc tgaccgtccc tgacgcaatg ggcttgggac tgtattttgc cgaaggcgaa
    32521 ggcccgaaat tcaaacgcgc cctgcaacac gaggacgaca ttgccaaatt gcacgtcccc
    32581 gatatggaaa aactgcaata cgtctttgat gccgtcagct ccatccgtaa agcactggac
    32641 ggccgcgtac cgcttatcgg cttctccggc agcccgttca cacttgcctg ctacatggtt
    32701 gaaggtggca gcagcaaaga attccgcacc atcaaaacca tgatgtactc gcgccccgat
    32761 ttgctgcaca aaatcctcga taccaatgct caagccgtta ccgcctatct caacgcccaa
    32821 atcgacgcgg gcgcgcaggc tgtgcagatt ttcgacactt ggggcggcgt cttgagcgat
    32881 gaggcgttta aagaattcag cctcaaatac atccgccaga tcgtcgccgg actcaaacgc
    32941 gaaagcgaag gcagacgcgt gcctgttatc gtatttgcca aaggcggcgg gctgtggctg
    33001 gaaagcatgg cagaaattgg cgcagacgca ttgggcttgg actggacgtg caacataggc
    33061 gaagcacgcc gccgcgtcgg caagcaagtc gccctgcaag gcaacttcga cccgttcgcc
    33121 ctcttcggta cgccggaatc catccgcacc gaggtcgcac gcatcctagc cgactacgga
    33181 caaggcagcg gccatgtctt caacctcgga cacggcatca accaacacgc cgaccccgaa
    33241 cacgccaaaa tcttagtcga caccgtacac gagctgtcgc ggcagtatca cggcgggtaa
    33301 gccggcagga aactgcccga tatgccgttt gaagccgaga gatggccggt tagggtaaaa
    33361 ataaggcaat gcggcaatat ccgccgtgta cggatagtac atgacggcgg cggtgttgcc
    33421 gtattggcgc aatcccaacc gtccctattt tcagacggca tttttgtttt cagatgtagg
    33481 gaaaaccgat ggcaaaaacg cttaaaaccc tttaccaatg caccgaatgc ggcggcactt
    33541 ccccgaaatg gcagggcaaa tgcccgcatt gcggcgagtg gaacacactt caggaaagct
    33601 tggccgcgcc cgagccgaaa aacgcccgct tccaatcttg ggcggcggat acctcgaccg
    33661 tccaatccct ctcctccgtg accgccaccg aagtgccgcg caatccgacc ggcatgggcg
    33721 aactcgaccg cgtattgggc ggcggtttgg tcgatggtgc ggtcatcctg ctcggcggcg
    33781 accccggcat cggcaaatct acgctgctgc tgcaaaccat cgccaaaatg gcgcaaagcc
    33841 gtaaagtgct atacgtttcc ggcgaagaat ccgcccaaca ggtcgccctg cgcgcgcagc
    33901 gtttggaact gcccaccgaa ggcgtgaacc tgcttgccga aatccgcatg gaagcgattc
    33961 aagcagcgtt gaaacagcat cagcccgaag tcgtggttat cgattccatc caaaccatgt
    34021 attccgacca aatcacttcc gcccccggtt ctgtgtcgca ggtgcgcgag tgtgccgccc
    34081 aactgacgcg catggcgaaa cagatgggca tcgccatgat actggtcgga cacgtgacca
    34141 aagacggcgc gattgccggc ccgcgcgtgc tggaacacat ggttgatacc gtgctgtatt
    34201 tcgagggcga ccaacattcc aactaccgca tgatacgcgc catcaaaaac cgcttcggcg
    34261 cggcaaacga actgggcgtg ttcgcgatga cggaaaacgg tttgaaaggt gtgtccaacc
    34321 cgtccgccat cttccttgcc agctaccgcg acgacacgcc cggttcgtgc gttttggtta
    34381 cgcaggaagg cagccgaccg cttttggttg aaattcaggc attggtcgat gacgcgcacg
    34441 gattcacccc caaacgcctt accgtcggac tggaacaaaa ccgcctcgcg atgctgctcg
    34501 ccgtgttaaa ccgacacggc ggcatcgcct gtttcgatca ggatgtgttc ctcaacgccg
    34561 tcggtggcgt gaaaatcggc gaaccggcgg cggatttggc agtcatcctc gcgatgcttt
    34621 ccagcttccg caaccgcccg ctgcccgaaa aaatggttgc atttggagaa atcggtttga
    34681 gcggtgaagt ccgccccgtc gcgcgcggac aagagcggct caaagaagcg gaaaaactcg
    34741 gcttcaaacg cgccatcgtc cccaaagcca atatgccgcg caacgccaaa gagtttccga
    34801 acctgaaaat ctacggcgtt tcgagtttgc aggaagccat tgatatttgt cgggaagata
    34861 gggattgaaa ggaaatgccg tctgaaatcg ggtttcagac ggcatttgat ttccatccgc
    34921 catatgtcgg cgacgggctt attcgcctac ggttttttgt atcagttttt cggcgtttgc
    34981 caaagtgttt gccacttcgt caaaaccgat gcggctgccg gcgatgaggg cgcgcgtatc
    35041 ggtataggcg gcgcgtactt tgccgtctgt ttcggtaacg aggacgcgca ggggcagttg
    35101 cagggcgaag gcggggtctt tgaccatcag cggcgtgccg gctttgggcg tgccgaagac
    35161 gatgactttg gccggctgca tcgttaagcc gtttcggcgg gcggcttcct gatggtcgat
    35221 gacggcaaaa atgttcatcc ctttgctttt tatggcggtt tcaaggcggc tgacggtttc
    35281 gtcaaagctg tatttcgagg tgagggtatg cgtggtcata gcggtttcgt tttgggtggg
    35341 cggtttgccg gcagggtgtg ccgaagcggt tgaaatgcag agtgcggatg cggcaatcag
    35401 ggggagtatg tgtttcatcg tatttccttt ttcctttttg gttgaaacgg tagaatcaga
    35461 ctttattcgg gaggggtgta accctttcca aatcagggca acacataggg cggtgcttta
    35521 tgtgtcgtga aacatcattg ttccttatcg gtttgtttat caggcttcgg acggggcggc
    35581 gcgcgccgcg cccgatgttg cgccgcgtgc cggaacgccg tatgccgtct gaaagcctgt
    35641 cctttcagac ggcattgcgt catttcatcc cttttttgag caggtcttca taaccgccgt
    35701 gattggcaac atttgtataa cctgcttttt tcagctcttg aagggcggct tcggcacgcc
    35761 gtccgctgcg gcagtagagg ttgaccggcg tgtctttgtc gggcgcggct tcgtgtatgc
    35821 ggcggacgat ttggtcgacg gggatgttga ccgcgttgtg caaatgccct tcgctaaatt
    35881 cctgttcgga acggacatcg atccaaacgg ccggatgttg cgcggtttgg gcggcggata
    35941 cgggtttttg cggggctgcc tgcgcggcaa aggcggctga ggcaatgagt gcggcggtaa
    36001 tcaggtgttt gatattcata gggttttcct gcggttgttg tccgaaagga cgggaagtta
    36061 ttttatctgt tccaaagcgg cggcatctat gtcccaacgc caaacgccgc cgcctttgcc
    36121 atccaatccg cgcaaaaaca ggtagcggac ggaaacggcg gcgggcggtt gtccgcgcag
    36181 cttgaagtag cgtgcggcgg caacggcgta aatcagtgcc tgaaggtaat agtggtggtg
    36241 tgcgacggct tcgtccattg cctgttgcgt gtaggcggat gcgtccgtac cgaggtggtt
    36301 tgatttgtag tcgatgacgc agatattgcc gtcggggtct tggcagacca tatcgacaaa
    36361 gccgtttaaa aagccgttga cggtgtggaa gtcgagcgtt tcggcagcgg cacggcagac
    36421 ttcgggcagc ctgatgtcgt cgcgggcaaa ccagtcgcgc aggcgtttga ggctgaagtc
    36481 ttcggtgtgg agggtaaagc ccatttcggg acagcggcac tcgggtgaga tgtcggacag
    36541 gtcgtatgcc cccgtcagcg gcgttttgcg gcaggcttcc gccatttcgg caacggcggg
    36601 cagccatatt tcttcaaaac cgtatttttt cagcttgtcg gcaatgaggg tttcctgtcc
    36661 ggcggctgct tgtccgaatt tgaaatcttc aagaatttcg tgcaggcaca gccccgcctg
    36721 cgtgcctttc ggaaaatcgt gtatcgatat gccgtctgaa gccgtcggcg tttcagacgg
    36781 catcgccggc accgaggttt cggcggcatc caaggacggg caggcatctt cttcgccgcc
    36841 gtcgggcgtt tgggtatggc ggcttaaggc ggtaaagcta gtgtggcgga caaatcggaa
    36901 tccgcgttcg ggaatgctgt ttgcggcaaa ttcggcggtt tgaccggcgt tgctgcgata
    36961 ggcggcaggg ggcggcgcat tttcggtgaa ggcgaaattt gtgccggaag gggcgttgtc
    37021 cgccacgcgc cgccagttgc gtttgagcat cgcgatgccg tctttttcac acgcataggc
    37081 acggcggacg gtttcacggc tgtcttgggg cgagccttca atcaggtagg cgagggggtt
    37141 gtcggcagta ttggtggagt acgcggcgta gatgttgagc tgttcctcgg cacgcgtcag
    37201 tgcgacataa agcaggcgca ggcgttccgc catttcttca tcggcgtatt gtttctgttc
    37261 gtcttccgac agttgcgcct ttgccaacag ttcggttcgg tttgcgcttt ggtggaggat
    37321 ttgccagtcg gacggcccgg tatcttgcgc gtcccacgca aacgggcagt acaccagcgg
    37381 atactgcaaa cctttcgagg cgtgcatggt aacgattttg accaaatctt cgtcgctttc
    37441 cagacggatg gcgcggttgt cgccgctgtt gttgccggcc aggctgattt ggtcgcgcaa
    37501 ccatttgtgc agcgcggctg ggttgcggtt ttgcgcgtct tcggcggcaa gcagttcgag
    37561 cagttggaaa tagttggtca ggctgcgccc gttgttccgg cttaagaggc gcgtttcgat
    37621 gccgtgtgtt tgggaaaatt gctgcatagc ggcgaaaatg ccgtattgat tccagttgtc
    37681 gagtgcggtt cgggcagatt ccgcccaatg caaaatctcg ctttcgtttt ggttgaagtc
    37741 gtgcaattgc tgcgcgtcat aaccgaatat gccgcttgtc aggacaaagc gcagcgttcc
    37801 ggcgcggcgc ggttcgagcc agaagccgat gagtgcggac agggcggcgg cttcgggcga
    37861 ggcgaacaca gattcgcgcg aaagcaggac gctttgcacc tgccgttttt tcagggcggc
    37921 ggaaaccatc accgcctcgt tgtgcgtgcg taccagcacg gcaatatcgc ccgactgcaa
    37981 cgggcagcct ttgaaattca gacggcctcc ggcggcttcg ttgagcgcgt gggcgatttc
    38041 gtcggcgcaa tagtcggcgg cacggcggcg caaaacgtct ttgttggctt tttcattgtc
    38101 gttttcgtgc agccaacgaa cctgtacggc aggacgttcg ggggacaacc tgctttcggc
    38161 acgcgccgca ccgacttccg aatagccgat gttttccaaa acgaacgggc gttctttgag
    38221 gcggaacagc gcgcctatgc tgccgataag cgcggcgtgg ctgcggtagt tggtggcgag
    38281 cgtgtagcgg tgccgcgcgt ctccggcggc ttgcaggtag gcgtaaatgt ccgctccgcg
    38341 aaagctgtaa atcgcctgtt tgggatcgcc gacgagaaac agtgggcggt tttgggcaat
    38401 gaaaatcttt tggaagattt catattgcag cgggtcggtg tcttggaact cgtcgatcag
    38461 cgcggtttcc cagttttcgg caacggcgcg ggcgagggtt tcggcgtgcg gattgtcggt
    38521 cagcgcggtg tggacatcga gcagcaggtc gtcgaaaccg cgttcgcggc gcgatttttt
    38581 catctcggca aggctgcggt tgaggtatcc gattaaatcc agttgcagcc ggatcattgt
    38641 tgcttcttcc gcttcttcga gtgcgttcaa atcgcgcccg aagtctgcca gtttctgcaa
    38701 ttcggcaaat gctgccgcat cgggcgtttt gcctttttta agggcggctt cgagtttgtc
    38761 ggacgcaagt ttcaagagtc tgtcgtgcgt gtctttgtcc agaaagggca gttgtccggc
    38821 ggcggatttt tgtgccagtt ctttaaaaag gttgccgaag ctgtttttgc ggtaactgtt
    38881 gccgttgagg tcgggatgga tgcgccaaaa gccggcttcc agctcgggca gcaggcggca
    38941 gatggtttgc catgaggttt cggcgttgcg ctgcgcctgt ttcaaatccg cctgcggacg
    39001 gcggaaattc aggtacgggc gggaaagata gcgcgaaatt tgggcaagga cggtttgcgg
    39061 cacagctttg cgtttaaacg ccaatgcggc aagcaccgga tcattgctga cgcgttcccg
    39121 ccaaaaatct tgcgccggga taagcaggcg gtcgccgtct tcttcggtca gttcgacatc
    39181 gaacggtgct tggcacaaga aggcgtagtc gcgcaggata cgttggcaga agccgtggat
    39241 ggtatagatg gcggcgttgt cgaattgccc gatggcggcc ttgaggcgga caatcagacg
    39301 cgtccggccc tctttttgca aagcctgttt taagagtgcg ggcaggaagg tgtcgccttt
    39361 gtggtgttcg gcgcagtagg cggcgatgcc gtctgaaagc gtgtcgtctc caagtttggc
    39421 aatttcttta ctttctaaaa cctgcaacac atcgtccaaa cgtgcgcgca ggcgtgtttt
    39481 caactcggcg gtggcggctt tggtgaaggt aacgaccaat acgcgctcga cgtttttttg
    39541 ttccaatacg atcaggcgcg taaacagggc ggcgatgccg taggttttgc cggtgccggc
    39601 agaggcctca atcaggttgg tgccggcaat ggggacggtc agcgggtcaa atgcttggat
    39661 gggtgcagac atagtgcgcg ctcggaaaac ggttggacgg taaaacggga aaatgccgtc
    39721 tgaaaaaggg tttcagacgg catcgtctgg cttagaggtt ttgcaggcgt tcgacagacg
    39781 gcgcgtagta gtatccgccc gaaacggcgg cggagaggtg ccggagcagc aggtcggttt
    39841 tgccatccgt gtcgccgaac atactcaata attgcgcttc gatattgtgc agcgtgcggc
    39901 agtatgcggt aaacatcaaa ccgtgttcgc cgctgatttt gccgaagggc aggctgcggc
    39961 ggacgatttt caggccgact ccgttttctt tcaggttgac gcggccgagg tgcgaatcgg
    40021 gcaggcggac atcgcggccg aattcgtcgt cggtttcctt gccgcgtccg accgaggcct
    40081 cctgttcggc gacggggacg gcatcccatt ttttcaaatc gtgcaggtat ttttgcagca
    40141 ggacatagct gccgcccgca tcgggttttc cttcggggat gatggcgact tcgcggacat
    40201 tttcatcgcc ctgcgggttt tccgtgccgt cgacgaaacc gtccagtccg cgatcctgat
    40261 acaggcgcaa accgtgttct tcggacgcga cgcatatgct gtcgccgaac gcgcctaaaa
    40321 cggattgggc aagcgcgtag gcggcgtttt ggcggaagga ttggatgtgg atggacatat
    40381 cgtgctgcgt ggacggcgca agcccgttgc ccatttcgga gaagggtttg atttcactgc
    40441 cttcgtccgt atgtccgaat gttgcccagg ctttgctgcc gaaggcgatg gtcagaccca
    40501 aaatatcgtc cggaaagcgg gctttcaagg cagttaacgc gtcgagcgaa gcgcggcagg
    40561 cggctttaat atcgttgagg cggttggcgg cgaagtcggc ttcgataaag atgccggctt
    40621 gggcgtggtc gggaatgatg gcggattggg gcgtgttcat gagatgttcc tttttggtgt
    40681 catctgtttc ggatggatta tagcaccgaa tcggcaggcg gatttttgcc ggaacggcgt
    40741 gcgtgaatcc gccgtttgca tacctgatgc cgcttttcgg tttcgtgccg cccaccgcct
    40801 ttcccgcccc ctttatttcc gcttccggcg gcttcggcat atcttttcca ttccgatttg
    40861 gaataaccat ataaaaaaag gattctttgt gtttgccgca atttcactta gaatgccgca
    40921 cttgcacact ttttacagga gaggatgatg ttgaaaaaat tcgtactcgg cggtattgcc
    40981 gcattggttt tggcggcctg cggcggttcg gaaggcggca gcggagcatc ttccgcgcct
    41041 gcacaatcgg cagtttccgg ttctttaatc gagcgcatca acaataaagg cacggttacc
    41101 gtcggcacgg aaggcactta cgcaccgttt acctaccacg acaaggacgg caaactgacc
    41161 ggttacgatg tggaagtaac ccgcgccgtg gcggaaaaac tgggcgtgaa agtcgagttt
    41221 aaagaaacgc aatgggattc gatgatggcg ggtttgaagg cggggcgttt cgacgtggtg
    41281 gcaaaccaag tcggtctgac cagccccgaa cgccaagcga cattcgacaa atccgatcct
    41341 tacagctgga gcggtgccgt attggttgcc cgtaacgaca gcaacatcaa atctatcgac
    41401 gacatcaaag gcgtgaaaac cgcacaatcc ctgaccagca actacggcga aaaagccaaa
    41461 gctgcaggcg cagatttggt ggcagtggac ggtttggcgc aatcgctgac cctgattgaa
    41521 caaaaacgtg ccgatgcaac cctgaacgac gaattggcgg ttttggacta tctgaagaaa
    41581 aacccgaatg cgggcgtgaa aatcgtttgg tccgcacctg ccgatgaaaa agtcggttcc
    41641 ggcctgattg tcaacaaggg caatgacgaa gccgtggcga aattcagtac ggcaatcaac
    41701 gagctgaaag ccgacggtac gctgaaaaaa ctgggcgaac aattcttcgg aaaagacatc
    41761 agtgttcaat aatttccttg cttcgctgcc gtttatgacg gaaacacgcg ccgatatgat
    41821 tgtcagcgcg tttttgccta tggtcaaagc cggcttcgcg gtgtctctgc ctttggcggc
    41881 agcttctttc gttatcggta tggttattgc cgtagccgtg gctttggtgc ggattatgcc
    41941 cgccggcggc attgcgcgga aaatcctgct gaaattggtg gaattttata tttccgtcat
    42001 tcgcggtacg ccgctgttgg tgcagcttgt gattgtgttt tacgggctgc cgtccgtcgg
    42061 tatctatatc gatccgattc ccgccgccat tatcggcttc tcgctcaatg tcggtgcata
    42121 cgcttccgaa accatacgcg cggcaatttt gtccgtacct aaaggccaat gggaagcagg
    42181 tttctccatc ggtatgacct atatgcagac gttccgccgc atcgtcgcgc cgcaggcatt
    42241 ccgcgttgcc gtgccgcctt tgagcaacga gtttatcggc ttgttcaaaa acacctcgct
    42301 cgcagcggtg gtaacggtaa ctgaattgtt ccgcgtcgcg caggaaacgg caaaccgcac
    42361 ttacgacttt ttgcccgtct atattgaagc cgcattggtt tactggtgtt tctgcaaggt
    42421 tctgttcctg attcaggcac gtttggaaaa acgtttcgac cgttatgtcg ccaaataagg
    42481 agttgttatg attaaaatcc gcaatatcca taagaccttc ggcgaaaaca ctattttgcg
    42541 cggcatcgat ttggatgtgg gcaaagggca ggtggtcgtt atcctcgggc cttccggctc
    42601 aggcaaaacg acgtttctgc gatgcctaaa cgcgttggaa atgcccgaag acggacaaat
    42661 cgagttcgac aacgagcgac cgctgaaaat cgatttttct aaaaaaccaa gcaaacacga
    42721 tattttggca ctgcgccgca aatcaggcat ggtgtttcaa caatacaacc tctttccgca
    42781 caaaaccgcc ttggaaaacg taatggaagg accggttgcc gtacagggca agcctgccgc
    42841 ccaagcgcgc gaagaggctc tgaaactgct ggaaaaagtc ggcttgggcg acaaagtgga
    42901 tttgtatccc taccagcttt ccggcggtca gcagcagcgc gtcggcattg cccgcgcatt
    42961 ggcgattcag cccgagctga tgttgtttga cgaacccact tccgcactcg accctgaatt
    43021 ggtgcaagac gtgttgaacg ccatgaagga attggcgcgg gaaggttgga cgatggtcgt
    43081 cgttacccac gaaatcaagt tcgcgctgga agttgccacg accgttgtcg tgatggacgg
    43141 cggcgttatc gtagagcagg gcagcccgaa agagttgttc gaccacccca aacacgaacg
    43201 gacgcggaga tttttaagcc aaatccaatc taccaagatt tgattaagca tttttcctgt
    43261 gtttacagag gccagattag attcggattg ctttcgatga cggctttgaa ttggttttga
    43321 atccgctcga tggcttcttg cgtatccgcc tcaaaacgca acaccagaat cggcgtggta
    43381 ttggaagcac gcatcagacc gaagccgtcg ggaaattcaa cgcgcagacc gtcgatggtg
    43441 atgatttcgg ttgcgccttc aaattcggct ttggcggcga gttcgtcgat aacctgatgg
    43501 ccgttgctgc cttcgggcag ggcgatgttg agttcgggcg tggaaatgct ttgcggcagg
    43561 ttgtttaaca cttcggacgg attatcggag gcagacagga tttccaagag gcgtgcgccg
    43621 gcgtacagac cgtcgtcgaa gccgaaccag cgttctttga agaagatgtg tccgctcatt
    43681 tcgccggcaa ccggcgcgcc ggtttttttc atggaggatt tgataaagct gtggccggtt
    43741 ttttccatca caggttcgcc gccgtgttct ttaatccaag gcgcaagcag acgggtggat
    43801 ttgacgtcga aaattacttt ggctttagga ttgcggctca acacgtcttg cgcgaaaagc
    43861 atcagttggc ggtctggata gatgatgttg ccgtctttgg taactacgcc caagcggtcg
    43921 gcatcgccgt caaacgccaa gccgatttcg gcatcgccgt ttttcagcgc ggcaatcaaa
    43981 tcttgcaggt ttttgggttt ggatgggtcg ggatggtggt tggggaaatt gccgtccacg
    44041 tcgcagaaaa gctcggttac ttcgttgccc aagcctttat agagtttgcc ggcaaacgcg
    44101 ccgcccacgc cgttgcccgc gtcgatagcg atgttcatcg ggcgtttgag tttgatgtgg
    44161 ccgacgatgt ggttgtggta ttcgccggag atgtcttttt cggttacgtt gccttgtttg
    44221 tcggcggcaa caaaaccgtc tttttcaata atggctaaaa gttcttgaat ggcttcgcct
    44281 gcgagcgtgt cgccgccgag catcattttg aaaccattgt aatcgggcgg attgtggctg
    44341 ccggtaatca tcacgccgct gccgccgcat tcgttgatgg cggcaaaata gagcatgggc
    44401 gtggcgacca taccgacgtt gaggacgtcg atgccgctgt cggtaaagcc gcgttggatg
    44461 tgctccatca gttcgggacc gctcaagcgt ccgtcgcgtc cgagcgcgat gcgggtcatg
    44521 cctttttcgg cggctttggc ggcgatggcc ctgccgatga gataggcggc atcgtcggtc
    44581 agggttttgc cgacaatgcc tcggatgtcg taggctttga agatgtcgcg ggcaatattt
    44641 gccatgatgg tttccttgtt gtggtttcag gaaaggaggc tattttaaca cgttgcaaca
    44701 ttgtccgaag gcttgcggga ggtgttcaga cggcatatgt gcttggattt tatgccgcct
    44761 gaaacaaaaa aagcagcctt tgtgcaggct gctttcggat tgccggttta taccgcttcg
    44821 gctttaatga tgacgacagg ttcgctcggt acgtcgtcat ggtagccgtg gcgtttggtg
    44881 gatacgcctt cgatggcatc gacaacatca aaaccgtcaa cgactttacc gaatacggca
    44941 tagccccagt cttggacgac ggttttgccg tacagctctt tagaacggaa gttcaggaaa
    45001 gcgttgtcgg cagtgttgat gaagaattgc gcgctggcgg aatgggggtc ggaagtgcgt
    45061 gccatggcga tggtgtattt atcgttgggc aggccgttgg acgcttcgtt ttgaatcgga
    45121 tcgcgggttt ctttttcgtt catgttttca tccatgccgc cgccttgaat catgaagcct
    45181 ttgatgacgc ggtggaagat tacgccgtcg tagaagccgt ctttgacgta ttgctcgaag
    45241 tttttggcgg taacaggggc tttgtcgaaa tcgagttcga ttttgatgtc gcctttgttg
    45301 gtgtgcagga taatcatggg tttcctttcg ttagaatccg gttttgaatg attcgacaaa
    45361 ttgtgtctga acgacaaact tcaaggtcgt ctgaaaaata ttctttcaga cggtcttgtt
    45421 gtttaggtcg atggtttaca tcagtacagc ataagcccac agagcaacca atactacgca
    45481 gaggatgttc agcagtatgc cgacattcat catttcgcgt tgcttgatta agcccgtgcc
    45541 gaacacaatc gcgttaggcg gtgtggcaac cggcagcatg aaggcacaag atgcgccgat
    45601 gccgatgacg aataccaaga cttgttcggg cagccccatc tgcatagcga tgccggagaa
    45661 aatcggtaca agcaatgcgg cggaggcggt gttgctggtg aactcggtca gaaaaataat
    45721 gaaggcggcg acgatgagta tcaccaaaaa tgcgggcgcg ccggaaaagg tggcggcaac
    45781 ctgctgtccc aaggcttcgg acgcgccgga tgttttcaac agcgtgctca ggctgatgcc
    45841 gccgccgaag agcatcaaca cgccccagtc ggtattgcgg gcgacttcct tccattgcgc
    45901 cacgccgaag acgacgacgg cgacggcggc actcagggcg ataacggtgt cgggattgga
    45961 aatgccgaag gcggttttga ttttggagct gaatatccac gcggcggctg tggcaaggaa
    46021 aatcaacagc gcgatcacgc ggtgcagcgt ccaagggatg gattcggctt tgatttccac
    46081 gcgttcgttc aaattaggtt tgaggatgac gtacagggag agcagcatca agggcagaat
    46141 caacagcatc atcggcaggc cgagcttcat ccagccgacg aagtccagat ttagggcttt
    46201 ggcggcaatc aggttgggcg gcgagccgac gagcgtgccc aagccgccga tgctggcgca
    46261 ataggcgatg ccgagcagga ggaagacgta ggttttgtgt tctttttcct ggtcgaggtg
    46321 gctcagcata cccattgcta gaggcagcat catcgcggcg gtggcggtgt tgctgatcca
    46381 catggacaga aaggcggtaa cgaggaacaa catcaaaacc gccactttca tattgccgcg
    46441 cgacaggcgc aacaggctga cggcgatttt acggtccagc cgctgcatat gcagggcggt
    46501 ggcaagcgcg aagcctccga aaaaaatgta gataatcggg ttggaaaaat cagccatcgc
    46561 ctttttgatg tccatgtcgg ggaaaccgag tacgacggcg agaatcggca ccatcagtgc
    46621 ggttacggta atgtggacgg cttcggtaaa ccaaagtgcg gcaacgaaaa tcagcagcgc
    46681 gataccttta ttggcatcgg ggctgtaagg caggatgtgg taaatgccga aacagacgac
    46741 ggcggaaata atggtggtca gcaggccctt aaagtcggta atcggcttct gcgcactgag
    46801 cagctcgacg ttttcgggat gctgggtttt gtcctttgca tgcaggttca tgaatactcc
    46861 tttaaggcaa taaaatcggt ttttcttttg tgtcgtgcaa tccgaaacgg tttgtggaac
    46921 cgccgattct acaactggtt cgagtatatt tgtaatctga tgtagtgtaa atatattgta
    46981 aacgatttgt cggttttgtt tatgagatgg gattgatatg taaggggaaa aataggatgt
    47041 atcgggaaga ggtgcatcct gtttggggga aataaaccga ttcagtccgg gcggtcggcg
    47101 gcgcgggcgg caaagagtgc gagaaccgta cctgccatat cggcaagaac atcgcccaaa
    47161 ctgccggttc tcgttgcggt aaaccatgcc tgcgcgcatt cgctgaagag ggcgaaacag
    47221 agggcaaaga ccatcaggct gcggtagggg atgggaagtt ttccggtttt gaatgctttg
    47281 gtcaaaagcc agatttgtgc gaaaaacagg gcaaggtgtg ctgctttgtc gaaatgcgga
    47341 aacggcggcg gcgcggtgtc ggcagctttg aagagcagcg aatagatgcc gccggcaaac
    47401 cacaatgcgg aaagcaggct gaagcggttg cgcggcagct tcatgccgcc tcctcgtcca
    47461 gccacgtttg gcagattttg gacaggcgca ggaatttgcc gccgcgtgcg gcaagtatgt
    47521 cgcgccattg tgccacttct tcggcggatg gtgcgtcgtc gatgctgcat tcgtacagca
    47581 ggaaatcgag ggtttcttcg atgacgggga tggattcggt ttggataagc tgcttgagtt
    47641 cggtcatgac tgttcggata tggaaatcgg gaacatgccg tctgaaaggg cttcagacgg
    47701 catcgggtca tttgctgtgc aggaagcggg ttgcttcttc ccatttgccg gcaaggatgt
    47761 cgggtatggc ttgcagggat ttggcgacgg catcgtcaat ctgtcggcgg tgttccgtac
    47821 tgggtttgtt caggacatag ccgacgacga ggttgcggtc gcccgggtgg tcgataccga
    47881 ggcgcaggcg gtaatagtct gccgtgccga gttttgcctg aatgtctttc aagccgttgt
    47941 gtccgccgtt gccgccgccg agtttgaatt taatccgtcc gcagggaatg tcgagttcgt
    48001 cgtggacgac gaggatttct tcgggtttga ttttgtagaa ctgtgcaagc gcggcaactg
    48061 cctgtccgga acggttcatg aacgtggcag gtttgagcag ccaaacgtcg ccgtcgggca
    48121 gggcggcacg ggcgacttcg ccgaagaatt ttttttcttc tttaaatgaa gccttccatt
    48181 tccacgccag ttcgtcgagg aaccaaaaac ccgcattgtg tcgggtttgt tcgtattctt
    48241 tgccggggtt gcccaatccg acaagcattt tgattttgtt tgacatgata ttttccgtgt
    48301 ttctgtcgaa tgctgtctga aggcttcaga cggcatggtt attcttcttg attttgaacg
    48361 cgtttgcggc gcgcttcttt ggggtcgatc aacagcgggc ggtacacttc gatgcggtcg
    48421 ccgtcgcgca ggggcgtgtc gtctttgacg gctttgccga aaatgcccaa aggcgcggaa
    48481 tgcaggttta aatcttcaaa tatgccgtcc aaaccgcttt gcagtgcggc ggcgcggacg
    48541 gttgttccct cggcaagctg catggttttc aaaacctgtc ggtcgggcag cccgtacaca
    48601 atctcaattt caagcataac ggcggtctgc ctctttgacg aacgcttcga ccagcgtggc
    48661 ggaaaggtgg ttgaagacgg gggaaattaa ggcggacaaa acggcattgg aaaaatcgta
    48721 ttccaaattg aattcgattt tgcacatatc gtcgcccaaa tcgataaatt tccacgttcc
    48781 acgtaaggtt ttgaacggac cttcgagcag ttccatacgg atttccctgc ccggaatgtt
    48841 gcggttgtgc gtggcaaacg attggcgaac gtgcatataa tccataaaca gccgcgcctt
    48901 cagttcgttg ccgctacgcc cgatgacttc ggtcttgctg taccacggca gaaagtgcgg
    48961 gtaatcctca accttgtcga ccagctcgaa cattttgtcc gcgccgtgca gcaccaagat
    49021 gtttttttca acttttttca cgggcatcac caatgcgggc gtgtattcga agggcggtat
    49081 tatagcggtt taattttaaa ccggtacagc cttgccccgt tctgatttca atttaaaccg
    49141 ccatatcgca gattcgtaaa aaccgatacg gctttggcgt ttcagacggc attgagtgga
    49201 aaatgccgtc tgaaaacggg atgggaaaac ggcagcttgc gggctgccgt ttgttcggga
    49261 agttaagcct tgttttcagg ctgctgctcg gactctgtcg aagcggtgtc tgccggggca
    49321 ggtgcttcgg tttcttcccg agtcggagcg tgcggcgcgt tatcttccgc cgcgtccgca
    49381 ttctcgcgca ggttgtggct gtaatctttg ggcgggctgg gttgtttgcc cgccatgatt
    49441 tccagtacct gatcgcggtc gatggtttcc cattccatca gggctttgca catcgtttcc
    49501 atcttgtcgc ggttttcatc gaggattttg taggcaatct gatactgctc gtccaaaatc
    49561 cggcggattt ccgcgtcgat gtcctgctgg gttttctcgg aaatgttttg cgaacgggtt
    49621 acgctgcgtc ccaagaagac ttcgccttcg ttttccgcat aaaccatcac gcccattttg
    49681 tcgctcatgc cgtagcgcgt taccatctcg cgcgccattt gggttgcgcg ttcaaagtcg
    49741 tttgatgcgc cggtggagat gcgtccgacg aagatgtctt cggcaatccg tccgccgaac
    49801 aggatggaga gctggctcaa catctgatct ttatacatac tgatgcggtc gcgctccgga
    49861 agctgccaag tcagacccag cgcacgtccg cgcggcataa tggttacttt gtggacgggg
    49921 tcggtaaagg gcaggctttc ggcaacaatc gcgtgtccgg attcgtgata cgccgtcgca
    49981 cgtttttcgt cttcgtgcat caccatactg cggcgttccg gacccatata gattttgtct
    50041 ttggcgtctt caaaatcgct ctgatcgact ttgactttat tgcggcggcc ggcaaacagg
    50101 gcggcttcgt tgaccaagtt cgccaaatcc gcaccggaaa aacccggcgt gccgcgcgcg
    50161 agggacaata aatccacaga ttcgtccaaa ggcacttttt tagaatggac gttcaaaatc
    50221 tgttcgcgcc cccggatgtc cggcaggggg acgacgactt ggcggtcgaa acggccgggg
    50281 cgttgcagcg caggatcgag tacgtcgggg cggttggttg ccgcaatcac aattacagtc
    50341 tgattgctct caaaaccgtc catttcaacc aacaattggt ttaatgtttg ctcgcgctca
    50401 tcattgccgc cgcccaaacc tgcgccgcgt tggcggccga ctgcgtcaat ctcgtcgata
    50461 aagatgatgc agggggcgtt tttcttcgcc tgctcgaaca tatcgcggac gcggctcgca
    50521 ccgacaccga cgaacatttc gacaaagtcg gaacctgaaa tgctgaagaa cggcacgccg
    50581 gcttcgcctg caatggcttt tgccaaaagc gtcttacccg tacccgggct gcccgccagc
    50641 aggatgccgc gcggcacgcg cccgcccaag ctttgatagc ggttcggtgc tttgaggtaa
    50701 tcgacgattt cctgcacttc ttctttggct tcgtcgcagc cggcgacatc ggcaaaggtc
    50761 actttgttgg catctttgtc cagcaggcgt gcgcggcttt tgccgaatga gaatgcgccg
    50821 ccttttccgc cgccgcccgt ctgcatacgc ataaagtaga accacgcgcc aatcagcagc
    50881 aggacgggca gcaggctgta aaacagggca gccagcgcgc tcggtttttc ttccggcgtt
    50941 acttttacac ggacgttttt gtcgagcagt gttttaatca ggttgtcgtc caaaggcgcg
    51001 ttggtgaaga aggtgctttt gtcggtgcgc tcgcccttaa tcaggtagcc gctgacgacg
    51061 gatccttcga tgttgacgcc ggatacttcg ccgttgttga cctgttggat gaactgagaa
    51121 tattcgattt gcccgttgtc ttctttttta ccgtctaaag cgttgaacgc agccatcagg
    51181 ccgataccca aggcgaccca gacaaggatt gatttaaagg tgttccccac ttagcaaggc
    51241 tccataattg aggtgtaaaa cggaaatgat tgtaaagcac gccgtctgta ttgtcagcgt
    51301 ttatttttgc ccaataaata aatctcactg gagcgattgc gcgaggcttc gggtttgcgc
    51361 gtctgcaccg tgccgaaaat ttcgcgcatg gctgccatgt attcctgata gcctgcaccc
    51421 tgaaagactt tgaccaaaaa gctgccgccg gttttcaggt gttgcgaggc gaagtctaaa
    51481 gccagttcgc acagataaaa gctgcgtgcc tgatcgctta cggcgtttcc cgacatattg
    51541 ggcgccatat cgcaaattac aaggtcgagc gggcggttgt ccaacaaggt ttcgaattgt
    51601 gccagtacgt cgttctcgcg gaagtcgccc tgaatgaagg agacgccccc tatggcttcc
    51661 ataggcagga tgtccaaggc gaaaactgct ccggaagtac ccgtcagctt ggcggcaacc
    51721 tgcgaccagc ttcccggtgc gctgcccaag tcggcaagta ccgtgccggg tttgattaat
    51781 ttgtcttttt cgttgatttc caaaagtttg tatgcggcac gggcgcggta gccgtctttt
    51841 tgcgccatat ggacgtagtg gtcgttgacg tgttcgtgca gccacgcttt tgaggatttg
    51901 gaacgtacag ccatagtggt tcgcgggtcg gaatggaaac cgcgtattgt acgttaattt
    51961 tgccgatgtc gtgccaaatc gcgtacaatg ccgcattatt ctttttattc aagcagtagg
    52021 aaaatgacgg ataccaaatt gaacaccaaa gaaattttgg aactgaaagc gcgcgcgcac
    52081 catctccatc ctgttgtgat ggtcggtcag cagggtctga cggacgcggt catcaaggaa
    52141 accgatgcgg cattgacggc gcatgagctg attaaagtgc gcgtattcgg cgacgaccgt
    52201 gccgaacgta tcgaaatctg cactgcctta tgtgaggcgg ttgacgcgca acctgttcag
    52261 catatcggga aacttttggt attgtggcgt aagaatatcg aaggctgaca gcctgaagct
    52321 gttgttttgc tattgttctt taatgggcgg gacgccgtcc ttcggtgcgg catttcggcg
    52381 ggccgaaacc ctttccggtg aaaacggatt ttgattgccg cccgatgctg tctgcaagtt
    52441 gcggcggctt ccgtatggtt tgaattgttg acaggatgat tggagggctt atgcagtttc
    52501 cttaccgcaa tgttccggct tcgcgtatgc gccgtatgcg cagggacgat ttttcacgcc
    52561 gcctgatgcg cgaacacacg ctgaccgccg atgatttgat ttatccggtg ttcgtattgg
    52621 aggggtcggc gcgcgaggag gatgtgcctt ctatgcaggg cgtgaagcgt cagagtttgg
    52681 acaggctgct gtttacggcg gaagaggcgg taaagctcgg tattccgatg ttggcactct
    52741 ttcccgtggt tacggcaaac aaaactgagc gtgcgcagga ggcgtacaat cccgaaggac
    52801 tcgtgccgtc aactgtccga gccttgcgcg agaggtttcc tgaactgggc attatgacgg
    52861 atgtcgcgct cgatccttat acggttcacg gtcaggacgg gctgacggac gaaaacggtt
    52921 atgtgatgaa cgatgaaacc gtagaggttt tggtcaagca ggctttgtgc cacgctgaag
    52981 cgggcgcaca ggtggttgct ccttccgata tgatggacgg gcgtatcggt gcgattcgcg
    53041 aggcgttgga ggatgccggg catatccata cgctgattat ggcgtattcc gccaaatatg
    53101 cttctgcatt ttacggccct ttccgtgatg cggtgggcag ttcgggcaat ttgggcaagg
    53161 cggacaagaa aacctaccag atggatccgg caaataccga tgaggcgttg cacgaagtgg
    53221 cgttggacat tcaggaaggt gcggatatgg taatggtcaa gcctggtttg ccgtatttgg
    53281 acgttgtccg ccgcgtgaag gacgagttcg gtgtgccgac ttatgcctat caggtttcgg
    53341 gcgaatatgc gatgctacag gcggcggttg ccaacggatg gctggatggc gataaagtgg
    53401 ttttggaaag cctgctggca ttcaaacgtg cgggcgcgga tgggattttg acctattatg
    53461 ccattgaggc ggccaagatg ctgaagcgtt gattttcggc cgggttaatt gaaatgccgt
    53521 ctgaaaccat ggtttcagac ggcattttta cggtttacaa agtcgtatcc agtgcggcgg
    53581 aaatatcatt ccaaatatca tctacatctt cgataccgac agagaaacgc agcaggccga
    53641 ccctgatgcc catttccatt ttcacattat gcggcacgcc gctgtgggac tgggaatagc
    53701 aatggttgac caaactttcc acgccgccga ggctggaagc cattttgacc agtttcatgt
    53761 ttttaatcac gctgtttgcc gcttcacgcg tgtcgttttt gagataaacc gtaaccacgc
    53821 cgcctatgcc tttgggcatt tgtgttttcg ccagttcgta atgttcgtga gacggcaggc
    53881 cgggatggaa cactttttca atggcaggat gggcttccaa acggcgcgcg atttcgagtg
    53941 cgttttggta atgggcgttc atgcgcagag ccagtgtttt gatgccgcgc aacaccagcc
    54001 agcagtccat cgggccggca accgcgccgg tatgcaccat catatcgtgc aaaggctgcg
    54061 ccagctcttt ggttttggca acgacgatgc ccatcaacac gtcggaatgg ccgcacaaat
    54121 atttggtagc ggaatggaac acaaaatcgc aacccatatc caagggctgt tgcagatacg
    54181 gcgtggcaaa ggtgttgtcg ataccgacca gtgcgccggc cgctttggct ttcgcggcaa
    54241 gcgctttgat gtctaccaag cgcaaaagcg gattggacgg cgtttccagc caaaccagtt
    54301 tgaccttgtg cgctttgagc aattcgtcca aattatccgg attgcccaaa tcggcaaaaa
    54361 caacgttcac cccccatttt tgataaacat cgaccaataa atcatacgcg ccgccgtaaa
    54421 tatcggcgac cgcgacgatg gtatcgcccg gttgtaggaa ggtacgccac acggcatcaa
    54481 tccccgccat accgctggaa aacgcaaaac ctgccgcacc gtgttccaaa tcggcaacgg
    54541 tgtcttctaa aatctgacgg gtcgggttgc tcaggcgcga gtagcggtaa ggcacatttt
    54601 cgccaatctc gtgcaacgcg aacatactgt tttgataaat cggcggcatc agcgcgcggt
    54661 tgtgttcgtc gcaatcgtag ctggaatgaa tggctttcgt ggcgaatttc atttggtctc
    54721 tgcctatgta gatgtgaata atcgaagatt ttatcactat ctgaaaaata gaaacaatca
    54781 atgcagctgc taaaagcgag tgatataatc tcgcatttgc agattgacgg tatattcccc
    54841 ggtggaaacg ccataccatg cacacatctc aacaattaca tgaatattaa ggaaaaacaa
    54901 ctcatgaaca ctattgcaga cgtgcaatcc agccgagatt tgcgcaatct gccgatcaat
    54961 caggtcggta tcaaagacct gcgctttccg attaccctgc aaactgcaga aggcatccag
    55021 tccacagttg cccgtctgac catgacggtt tacctgcctg ccgagcagaa gggtacgcat
    55081 atgtcgcgct ttgtcgcatt gatggagcaa cataccgaag ccttggattt tgcacaattg
    55141 cgcaggctga ctgctgaaat ggtcgcgctt ttggattccc gcgccggcaa aatcagcgtt
    55201 tctttcccat ttttccgcaa gaaaaccgcc ccggtttccg gtattcggtc cttactggat
    55261 tatgatgtca gcctcacggg cgaaatcaaa gacggggcat acggccacag tatgaaggtc
    55321 atgattcccg taacctcgct ttgcccgtgt tccaaagaaa tttcccaata tggcgcgcac
    55381 aaccagcgtt cgcacgttac cgtcagcctg actgccgatg ccgaagtcgg tatcgaggaa
    55441 gtcatcgatt atgtggaggc gcaggcgagc tgccaactct acggcctgct caaacgcccc
    55501 gatgaaaaat acgttaccga aaaggcctac gaaaacccga aattcgtgga agatatggtg
    55561 cgcgatgtcg ctacttcgct gatcgccgac aaacgcatca agagtttcgt tgtcgagagc
    55621 gagaatttcg agtctatcca caaccattcg gcttatgcct atatcgccta cccgtaggcg
    55681 cgtttgcaat gatgcccaaa tgccgtctga aaggcattgg ggcgttattc ccgagtctgc
    55741 cgccgctttg ttttcccagc cgtagcagag atgggtaaag tccggatgaa gcttgatggc
    55801 gaggacggat tgtatggtgc ggcagagccg tatcggtttg aaatcaattt gcaatcaaag
    55861 taataaaagg atgcacgatg acagtattaa gcaaagagca ggtcctatcc gcatttaaaa
    55921 accgcaaatc atgccggcat tacgatgcgg cacgtaaaat cagtgccgag gattttcagt
    55981 ttattttaga actcgggcgt ttgtcgccca gttcggtcgg ttcggagcct tggcagtttg
    56041 ttgtggttca aaaccccgaa atccgacagg caatcaagcc gttttcttgg ggtatggcgg
    56101 atgctttgga taccgccagt catttggtgg tgtttttggc aaagaaaaat gcccgcttcg
    56161 acagcccgtt tatgttggaa agcctcaaac ggcgcggcgt taccgaaccg gatgccatgg
    56221 caaaatcttt ggcgaggtat cgggcgtttc aagccgacga catcaagatt ttggacgatt
    56281 cgcgcgcctt gtttgactgg tgttgccgcc agacctatat cgcgttgggc aacatgatga
    56341 cgggtgcggc gatggcaggt atcgattcct gtccggtgga aggtttcaac tatgccgata
    56401 tggaacgcgt attgtccagg cagttcggtt tgttcgatgc ggcagaatgg ggcgtgtccg
    56461 tcgccgcgac attcggctac cgcgttcagg aaatcgccac gaaggcgcgc aggcccttgg
    56521 aagaaaccgt tatttgggca taaggcaatg ccgtctgaaa acgcaaggat tttcagacgg
    56581 cattttttaa tgcttattta aaacgattcg ccgggggcga gataacgcca tttgccgggc
    56641 ggcagcctgc cgagtttgac cttgcccatg cggatgcgtt tcagcccgac gacgcgcagc
    56701 ccgaccagtt cgcacatacg gcggatttgc cgctttttac cctgtttcaa cacgaagcgc
    56761 agttggtctt cgttttgcca ttctacttgg gcgggacgca gtttctcgcc gtccaaactc
    56821 aatccgtgat tcagtaaggc aagtcctttt tcgtccaatt ttccgcgcac gcgcaccaaa
    56881 tattcttttt cactgccgct gttttcgccg ataagctgct tggcgatacg gccgtcctgc
    56941 gtcaacacca gcaatccgac tgaatcgata tcgagtctgc cggcgggggc aagaccgatt
    57001 ttgtgtttcg gatcgaaacg gatgcggctg gtatcgcctt cccagtgatt ttcaggggta
    57061 atcagttcgg cggcggattt atagcctttt tccgcttgtg cgctgacata gccgacgggt
    57121 ttgttcaaca ggatggtaat gcgtgccgcc tgctgttcgt gggctttctt gttcagttcg
    57181 atacggtctg ctggtgaaac tttctgacca agtacggcgg ttttgccgtt gaccgttacc
    57241 cagccctgtt cgatgtagcc gtcggcttcg cggcgcgaac aaagccccag ttgcgccatg
    57301 cgtttggaga ggcgcacggc atcttctgta tggtcggggg gagtttttgg attcataggt
    57361 gttttccggt aagggtcggt tcagaccaat tgttcgcccc agtgcagttt ttggcgcagg
    57421 gttttgaaat attggtagtc ggtcggatgt aggatgcgta aggggtttcg gtagcggcgg
    57481 atggtgatgc ggtcgaggtt ttgcacgtcg atatgggttt gaccgtcgaa atggacgcgc
    57541 gcgtcgccgc cttgggtaac gaggatttcg atttcggacg tgtctggaat ggcgatgggg
    57601 cggttggtca tggattgcgg gcagatgggg acgagcgtga aggcgtgtaa tcctgcctgc
    57661 atgatggggc cgccggcggc aagcgaatag gcggtcgatc cggtgggggt ggagacaatc
    57721 agcccgtccg aacgctgggt atagacgaat tcccgattga cgaagacttc aaactcaatc
    57781 atctgtccgg caccgccacg ggagaggacg gcatcgttga gggcgatggc gcgttcggcg
    57841 gttttgcttt cgcggatgag tgcggcctca atcaggatgc gctcttcggc aaggtatttc
    57901 ccttctaaaa cgggcaatag cttgtccgtc atatattcgc ggggaatttg ggtcaggaag
    57961 cccaaatgcc cttggttgat gccgataatc ggaacggcgc gcagggcgat ttcgcgggcg
    58021 acggagagaa aggtgccgtc tccgcctaaa acggcgacca ggtcgcagta ttgccccagt
    58081 tcggtcttgt tgacgatatg gcagccgacg gtgtcttggg tatagatgca gccttccttt
    58141 atgccgactt cgtcgagata gacggtaaag ccgtgctgct tcaaaaaggt aatcagcgtg
    58201 tgtgcggtgt cttggatgtc gggcgtgttg gggcgggtta cgatgccgat gttgtgaaaa
    58261 gggctgttca tgtcggatgc cgtctgaagg ttagtctatc caaatgtcgc gttcgagccg
    58321 gtcgaggcgt tcgttgaggc gttccacgcc gtcgcgcagt ctgcttattt cgtcgaggca
    58381 gtcggcaagg gcttcgttgc cgatgtttgc ggactcggat tcgcgggaaa atccgccgat
    58441 ttgttcggcg atgttcctgc cgatttgttt gatgccgtgt ccgatgtcgg cggcacggct
    58501 gccgatgtct gcctgcgtgc cgaaaatccg tgccaattcg tccgatgcgc gggaacgcag
    58561 gctgccgagc agggacagta ccgcgatgcc gaggatgagg tcgccttcga gcccgatgtc
    58621 gcccgccccg ggttcgccgc cttggaggat tttctgtacc gcgctgttgc ggaaggtaat
    58681 ttcggtgtct gcaaagccgt ttcccgccga gagcaaaccg tcttccgtga tgcgtcccgc
    58741 cagtttcagc ccggcaatgt tcagggtcag tgttttgcct gcaaaggcgg caagttccga
    58801 gcggctgtcc gggctttgca gaatcaggcg gttgatgatg gggaggaagg cggacatatt
    58861 ttctgattgg ggcggagaat gcctgtttgt tgctgttgcc gcttatttta caggcttaag
    58921 ccgttatcgc aaacggtacg gatgattttg cccacgctgt cgtcgggtgc gaaatccagc
    58981 gcgggcaggc cgagtttggc ggcttcttcc gtgtagaatt cgcgtcgtgt cgggtggcgc
    59041 ggttcgataa tgtttttcag ccgcctgccg ccggggttaa atgccgtctg aaacaggctt
    59101 tcgacggcga tattacggtg gacgatgttg atggggcggt tgccgcccgg gatgttttgc
    59161 ttttgaacaa ggcggctgac gggatggcgt tcggcgcaat aaagcccgcc cagccgcagg
    59221 atgtcgatgt tggagatgcc gctgtcgagc aggtgttgtt cggcggcgag gatttggcgg
    59281 gcggactcgg tttgcggatc gggtgtggcg gtttcgtcgc attcgcgcgc tgtatcgccg
    59341 taaacgctgg tgctgcttgt gaaaatcagg tgttgcacgt tgcacgcccg ggcaagttct
    59401 gcccattgtt tgacggtgtc ggcgtaatgc gtcagcgagg agggcggtag caggaagaac
    59461 cagacgggtt tgtcggcgtg gtgccgccac aatgccgtct gaaaggcatc ggtgctgccg
    59521 aggtcgaagg tgtcgagatg tatgggcagg ttgatgtcgt ccgaagtcag gctgcgtttt
    59581 atggcggcga cgcggctgcc gtgttggtaa aacttttgtg ccagcggcag gccgaggtaa
    59641 cctaggcctg tgatggagat atggggcggg gggactgcgc gcattcgctg ataccgtcgg
    59701 gtaagtgccg tctgaaggct gattcggacg ctgtgggttt acgggttgcc gttgccgatt
    59761 ttccggtcgt atttctcgcg gtgttcgggc aaaagataag gacgaaggag gcttaaggta
    59821 cgacggacgc cgcgtgcttt ggagtcttcg gtcagcttgg tgcggccgcg cagggagctg
    59881 tcgaagtcga accagtattt cgtgatcatc cacatattga cggcgaggtc gttcatggcg
    59941 gtttggtcgg cttggatgat gttcagaccg ttgagctggg tcagcaggtt gaccaagagc
    60001 ggggagactt tggcttgggt gaaggtattg tgttcgccca atagttcggc actgcgtgca
    60061 agcagggtgt tcacgtcgct gaataggaag cggtattccc acatcacgtc gtaaatgccc
    60121 gccatataat tgatggagtc ttccacatca gacggcaaca cggcttcgtt gaggtattcc
    60181 agcagggctt cgctgtaacg tttgaacagt tggacgatga tttcgtcttt gttgcggaag
    60241 tggtaataga ggttgcccgg actgatgccc aagtgggcgg caatatggtt ggtgctgatg
    60301 ttgcgctcgc cttcctcgtt gaaaagcgca aggctggcgt cgatgatgcg tgtgtaagta
    60361 ttgattttgg cggggcgggt cacgggcata ctccttggat ttacaggctg aacgaagcag
    60421 gcagccaatt gggttcggcg tgcaattcta cctgaaaccg agcaaatact gtaaatttga
    60481 tgtgttgcgc caactgccgg acatcgtttg ccgaggcatt gtttttgttc actaagacca
    60541 aagcctgcct gtcatgtacc gccgcgccgc cgatttgaaa gcctttcaga cgacattggt
    60601 cgatcagcca gccggcggcg agtttgaccg aaccgtcggg ctgcggatag cgcggcatat
    60661 caggatgccg ctgcaacaag gtggcggctt tttctgcgct gacgacgggg tttttaaaga
    60721 aactgccgac attgccaagc acgttaggat taggaagttt actgttgcgg attgcacaca
    60781 ctgcatcgga aacatctttc gccgtcggca ccctgcccgc gctcagttcg gcaacggcgg
    60841 ccgccaaatc gccgtaaccc aagttcggca caaaatgcgt ttttaatgca aatacgaccg
    60901 aaacaatcac ataacgccct ttaccttcct gcttgaacag gctttcgcgg taggcgaagc
    60961 ggcagtcggc attggaaagg gttacaaagg tttccgtatc caaatcgaag cagcgcacgc
    61021 tgtgaatcac atctttcgcc tctacgccgt atgcgccgat gttctgcacg ggcgacgcgc
    61081 cgaccgtacc cggaatcagg ctcaggtttt ccaaaccgtt caaacccagc gcgacggcgt
    61141 gcaggacaaa atcgtgccag atttcgcccg cctgcgcttc aatcagaacc atgccgtctg
    61201 aacgagcaat ttcgcgtatg cctttgtttt ccatatgtac gaccagaccg gcgtagtcct
    61261 ccatcaaaag gatattgctg ccgccgccca gccataaaac agtatctcgg ttgaactcgg
    61321 gtagccggac gatgtcgcgc aacccgtcgg cgtgttcaag cgcaataaag gctcgggctt
    61381 gggcgcgcag gccgaaagtg ttgtaggggg taaggtcggt tcggtatcgg atgggttgca
    61441 tggtttgaac tttaaaatga gtattgccag tggcgggctt cagcccatcg tttctatagt
    61501 ggattaacaa aaatcaggac aaggcaacga agccgcagac agtacaaata gtacggcaag
    61561 gcgaggtaac gccgtactgg tttttgttaa tccactatat ttttaatcgg cggagttttc
    61621 agacagcctt atgcgatctg accatctccc tactgcacaa ttccaagcac cacaccaagg
    61681 cgatggcggc gatggtgagc gaggcaatca atgccgtcca gaagccgtaa atgcccatat
    61741 cgaaacggta ggcgagcagg tagcccggca gcagaccgca gccccaaaag gcggcggcgt
    61801 ggatgaacat cggcaccttt gtaactttgt agccgcgcaa ggcgtaggag gcgatacatt
    61861 gggtgaagtc tgccggttgg aacaagccgg cgaacagtaa gacggtggcg gcgatgctta
    61921 aaaccgccgg atcattgttg tacatactta ccagcggcga acggaataat accaaggaaa
    61981 gcacggtaat cacggcgagc atccatcctg acaccagtga cacgcccgaa atataacgcg
    62041 cccgcgaaaa ttcgcgccgc ccaagcgaaa agccgatgcg caccgtcccc gccgagccga
    62101 cgctttgcgg aatcatatag agaatccccg acaaactgat gccgacctgc tgcgccgcca
    62161 cataatcctc gccgaaaggc gcaatcaaaa acacgataaa cgaaaacgcg ctggcttcca
    62221 aaaaataaga cagcccgatg ggtgcgccga ttttccaaat ctgtttgaac accgcccaat
    62281 ccggtttgcc gaatttcgcc gtcagtccga atgggcggaa gaaattttcc ttggcgatat
    62341 aaatccacaa tgccagcgcg ctgaaccaaa acaccgccat cgtcgccagt ccgcagcctg
    62401 cgccgcccaa agcgggcata ccgaatttgc cgtaaacgaa aatatagttc agcggcacgt
    62461 tcaacacaaa cgccgcaaag ctgaccaaca taatcaggcg cgggcggttc aggctggagg
    62521 cgtaggcgtg cagtgcgcgg tgtaccattg ccgccggcat cgccaagctg gtgaacagca
    62581 tatactgcgc cattgtgcct tccacataat cgctcaaggt cagccagttg cggaacggcg
    62641 taatcgccgc ccacatcaag accatgccga acacgcccaa aaacagcccg aaccaaatcc
    62701 cctgccgtcc cgtttcgccc acttcgtcgg ttttacccgc gccgtaaagc tgggcaatca
    62761 tcgggttcag cgccgccata atgcccataa aggtaatata aaccgtggca aacgcgctgc
    62821 tgcccaaagc caccgccgcc aagtcttcct tgcccgcacc gcccgccatc acggtatcga
    62881 caaaaccgat gcccacctgc gcgacctgcg ccaacagcat gggcagggca agagcggtca
    62941 gcaggcggac ttctttcagg aagacggaaa aggaaaagcg gttgaggtcg agcagcataa
    63001 gtgttcaatc aacaaaaatg ccgtctgaag cagaaaacgg cagcaggaag tgatgagaaa
    63061 taatggcgca cattatatcg taaaaaaatg ccgtgccgtc agacggcgga tacagggtat
    63121 aaaagtatat tcagattgtg tgtattttat ggtaaagttt ggttttaacg acttgacggc
    63181 attgagccgt cggacagggg ctgttcggat tctgaatcgg aaggaagcat cgccgttttg
    63241 acagcggcgt gatgcgttgc ggcaaagatg ccgtctgatt gcggatcggg cagccttttg
    63301 tattgacatg ataaaataga aggcagattc tcatgcagac atggcagctt ccggaacata
    63361 tcgccgacgt actgcccacg aacgcgcggc agcttgaaag cgcgagggag cagttgttgg
    63421 cactgttccg cgtacacggt tatgaactgg tacagcctcc gctgatggag tacgcacatt
    63481 ccctgctgac gcatatcgat gcggggcttt ccctgaaaac cattttggta acggacaggc
    63541 tcagcggcag gcagttgggc atacgcgccg acatcacgcc gcaggtggcg cgtatcgatg
    63601 cccatctttt atccgccaac caagggatta accggttgtg ttatgccggt ccggtgttgc
    63661 acgcgcagtc cgacggtctg ctgaatatgc gcgaaccctt gcaggcaggg gcggaaatgt
    63721 acggttttgc cgacatccgt ggcgacatcg agctgataga cctgatgctg aaaagcatga
    63781 aaattgccga tatgggcaaa gtgctgcttt cgctggggca tatcggcata tttcgcgcct
    63841 tgtccgatgc ggcgcatttg gatgcggggc agtctgcaac gctgcttgcc ttgatgcagg
    63901 ataaagatac cgagacggtc gaagcgcagg tcaaggcttg gaagctggac ggtatgtggg
    63961 caaaagcatt ctcgctgctg ccgcgcctgt acggcgggcg tgaagtgttg tccgacgcgc
    64021 gcggacggtt gccggatttg tcggcggtcg gcggcgcgtt gggcgaattg caggcggtgt
    64081 gcgacgcatt ccccgattgt gaaatccata tcgacttgtc cgagctgcgc gtcgacaatt
    64141 accacacggg cttgctgtat gccgcctatg ccgccgattt ccacgacgcg gtcgcgcgcg
    64201 gcgggcgtta tgacggattg ggcggatatt tcggcagggc gcgcccggca acgggattca
    64261 gtttcgactt gcgcagcttt atcgggcgtt tgcccaccag cgaacggcag cccgccgtgt
    64321 tggtcgatgc ggaagatgcc gaagcggcgc gcgaagcagt cgaagccttg cgtgaacaag
    64381 ggcagtgtgt cgtgattgac tacggtatcg gacacaatgt ttcggaagag cttgcaggcc
    64441 gtctgaaaaa gacggacggc gtttggcagg tcgtgaaacg ctaaataccc gttcatggcg
    64501 gatgaaaggc aaatcgtggt ggggcgcaaa gccgcaccgg tttggggatt tccgcaataa
    64561 tttttaatat cgataggtta tatggctatg gctaaaaatg ttgtagtaat cggcgcacag
    64621 tggggcgacg agggtaaagg taaaatcgtt gactggctgg cggaagaagc cggcggcgtg
    64681 gtgcgcttcc aaggcggcca caatgcgggt catactttgg tcgtcggcgg caaaaaaacc
    64741 attttgcgcc tgattccgag cggcatcctg catgaaagtc tggactgctt catcggttcg
    64801 ggcgttgtcg tctcccccga agccctgttg ggcgaaatcg acgagttaaa cgctgcaggc
    64861 gtgaaaaacg tcgaaggccg tctgaaaatc gcgccgacct gcccgctgat cctgccttac
    64921 cacatcgcgc tcgaccaagc ccgcgaagca tcgcgcggca aaggcaaaat cggcacgacc
    64981 ggccgcggca tcggccctgc ctacgaagac aaagtggcac gccgcgccat tcgcgccgcc
    65041 gatttgctgc atcctgaaaa actgcgtgaa aaactggatg ccatccttgc ctattacaat
    65101 gtccaactgc aacatctgca caatgccgag ccggttaaag cggaagacgt gatggcggtt
    65161 atcgaaaaag tcgcgctgcg cattgcgccg atgattaccg acgtgtcccg cgtgttgaac
    65221 gagaaaaaca aaaacggcga aaaactgctg tttgaaggcg cgcaaggtgc gttgttggac
    65281 atcgactacg gcacttatcc cttcgttacc tcgtccaact gtctggcggg agccgcttcc
    65341 gcaggcgcgg gcgtaggccc tcaaatgctg gattatgttt tgggcatcgt caaagcctat
    65401 accacgcgcg tcggttcagg cccgttcccg accgaattgt tcgacgaagt aggcgcaggt
    65461 ttggcggaac gcggacacga attcggctcg gtaaccggcc gcgcacgccg ctgcggctgg
    65521 tttgatgccg ccgccctgaa acgctccatc caaatcaacg gcatttccgg tatgtgcatt
    65581 accaaactcg atgtaatgga cggcgttgaa accatcaata tctgcgtcgg ctacgaattg
    65641 cccgacggcg gcaaaaccga tatcctgcct tgcggttcgg atgcggtgga aacctgcaaa
    65701 ccgatttacg aaacaatgga gggttggaaa gaatcgactt tcggcatcaa aaattatgag
    65761 gaactgcccg ataatgccaa agcatatttg aaacggattg aagaagtctg cggcgcgccg
    65821 gtcgccatcg tctccaccgg ccccgaccga gaagaaacga ttgtgctgca tcatccgttc
    65881 gcataaggtt ttgcagtaaa attgccgtct gaagccctaa tccgccgttg gtcataaata
    65941 gtagggtatc aacatttcgg gctacaatgg tacgtcagcc aatgccaaga cgtgccagcc
    66001 tgatttgttg atgtgtgtac tattgcatag gcggttaagc catgcaggag atgaaagtgt
    66061 atatttcgcg caaagcccat tagccgcaag cgaggggcgg ggtgcgcgag agagaggggg
    66121 gcaggtgcta agtcattggt tatctcctta ctatctatct aactacgggt gcattatgcg
    66181 cctatgcctg ttgcttgtca aacactatac agttaaaatg tgtaaagatt tagtaaggac
    66241 atataccctt ttctttacat ttagctccat cggataccag tgcgttcaga gaaaatttga
    66301 aaatttctat attttggttg tataatgctt tcattttaga aaggtctata atgccaaaat
    66361 cactctcgct acaagatgtt cagttaaggt tttccagtaa atttcctgat aagacggttt
    66421 tgaagttcac taaaaactac gaaccggtaa caatccaatg ccctttgcat gggtcggttg
    66481 tttacgggaa tctacaagct gccatgaaat cctcaacagg atgtcctgaa tgtactcgaa
    66541 atcccgaaaa gccctctcca aacgccgttg ccattaggtt ggaggacaca gagacagggg
    66601 aaatctacga gtttgcaagt acactggctg ccagtaaatt tatcggttgc tccaacagca
    66661 ctttagctgt acgtttaagc ggacgcactc cgtttgaccg attgattagg tatcgttata
    66721 ggttggtaaa gtaagttcac aaccactatg gcacttacat ttactcaagc agtttctaag
    66781 ctaacctcta aatttccaca tttgaatctt gtggagttca atggcgttcg ttacccgacg
    66841 gtaatcgtct gtcctataca cgggagggtt acttgctcta cattcaaaag tatgttggac
    66901 tctaaaagtg ggtgtccaaa atgtgcatct tatggtgtca attcccacaa aattccagaa
    66961 gatacaatag ataaattatc taaaaataca gtattggagg atactgtaac tggcgaaaca
    67021 cttacattcc cctcaagagc atctgctgca aggtcattgg gtataaaccc agcagctatc
    67081 actgaccgta taaaaggtcg ggttcacaca gagactttac ttgcagggag gtataaggtt
    67141 cacatctgca ctaaatgacg tatacacttt ttaacagtgt atacccctcg ccactatcag
    67201 gtgcttctcg aaaaatttga catttttata aatttgctat taaatccatt tgacaatcaa
    67261 ttttggagtc tcaaatggcc aaatctttca accaagcagc ttctgaactt actgatatat
    67321 tccctaatat ctctctaacc ggctttgacg gtgtgaatta cccagtaacc gttaattgtc
    67381 ctatgcacgg gaacgttcgt tattcgacat ttaatgccct tataaagtca aagtacgggt
    67441 gtcctgagtg tgctaagatg tcaaaaaccc aaacacctcc aaatgtaggg aagcccctcc
    67501 tcatcctcga cacaacgacc aacgaaacac tcacgttccc aagcgttact gccgcaggtg
    67561 ctgctttagg tgtacatttc caacaaatca atcacaggct caagggtcga acgtcgcccg
    67621 acaaccttat ttcaaacagg tacaaagtgc ttgggtacga taggtaaggt tcacaacacc
    67681 ctaaatccta cgaaccaagc tcgacggacg ttcaaatccc gattagagtt aatttatgta
    67741 aagatttagt aaagacgtat accatttttc tttacattgt gcttgcgcag gattccaggt
    67801 aggtctcaaa aaatttgaaa atttctatat tttggttgtg taatccattt gcacataacc
    67861 tatggagaca aattatgggt aagcgaatga ctttcgatac cgccaaatca cgctttcaag
    67921 agaaatttcc acatttagaa ttgttggagt tcagtggcat ttataaacct tccagtgtta
    67981 gatgtcctac gcacggggtt gtccaacttt tgtattacga cacagctata aagtcaaagt
    68041 atgggtgtcc ggagtgcggg aaacttaaaa tgaaggaaaa tacgcctccc caaaaccaaa
    68101 aacctgtctc catcctcgac accgccacag gcgaaacact cacgttcccc agcgtacaag
    68161 ctgccgccaa agccctaaac accccctacg gctctatacg aaccaagctc gacggacgtt
    68221 caaatcccga caaccttgtc tgtaacaggt ataaggttct gctataatca acctatggaa
    68281 aatattgaag aatacgcact gctgtctccc gaagccctgc tggaacgcct ggataccgtt
    68341 ttgagtatca gaatcggcgg caagggttgg gaatccagta tgaccgccaa ctttgcacag
    68401 acgctggtcg aaatacagga cagtctgtac agggttgtgt caaccgtcca atacggggat
    68461 gacaacctca agcggttgac agcggacaaa cggaagcagt atgagttgaa cttcaagatt
    68521 tccgagggtt ctacgcgtgt agagtccgac tttaaagaga ctttggttcg gttcggtaga
    68581 gatatgcttc aagatatgcc ccctaaaatc cgttcggcaa cgctggtagc gttgacgacc
    68641 ctgcttgtcg gaggggcgtt gggttacggt tatttggaat acctgaagca ggttgcttcg
    68701 gaagggtatc agaccgagcg tctgtataat gccgtcgacc gtcttgcaga atcccaagaa
    68761 cggataacgt ccgccatcct gaagggtgct agaggtgccg atttcgtgca aatcggcaga
    68821 cgttcctaca gtagggagga tatatcggag gcaaatagac gtgcagagcg tgtcccgtat
    68881 ggcgcagagt tggtttcaga cggcaatttt accgctgttt tatctgatat aggggattaa
    68941 caaaaatcag gacaaggcga cgaagccgca gacagtataa atagtacgga accgattcac
    69001 ttggtgcttc agcaccttag agaatcgttc tctttgagct aaggcgaggc aacgccgtac
    69061 tggtttttgt taatccacta tattttctgt ccggacacgg tttatcaggg tatatcaatg
    69121 cggcgtatcc ggtgcggaaa tggatacggt tggtgttggt atggaaacct gatgttttca
    69181 gacagcatat acaaaaaacc gtactgcttg cgcgtacggt ttttttgttg tttcaaatcg
    69241 gctcagagcg atttgaggcg ggcgattcgg ttgtccagcg aagggtgggt gctgagcagg
    69301 gagtcgcgcg tatctccggc gatgcccatt gcgttcattt cttcgggcaa atcgaccggg
    69361 ttgcctttaa gcctttgcag ggcggaaatc attttcggtg cgccgaccag ttttgccgcg
    69421 cccgcgtcgg cgcggtattc gcgttgtcgg ctgaaccaca tgacaattaa gctggcaagg
    69481 aagccgaata ggatttggaa taccatgctg accaggaaat aagttccctg cgactggctg
    69541 ccgtcgttgt ttcgggcaat caggttggca ataatgcgcg acaggaacac gacgaaggta
    69601 ttgaccacgc cttgaatcag cgtcagcgta accatatcgc cgttgccgac gtgtgccatt
    69661 tcgtgcgcca atacggcttc cacttcgtcg cgcgtcatat ggtcgagcaa accggtgctg
    69721 acggcgatca gggagctgtt tctcgatgcg cccgtggcaa aggcattggg ttcgggggag
    69781 tggtagatgg cgacttcggg cgttttcagg ttccattgcc gcgcttgggc ttcgacagtg
    69841 ttcaaaagcc aggcttcttc ttcggtgcgc ggcgtgtcga taacttccgc gccgaccgat
    69901 tgtttggcga tgaatttgga catcagcagc gaaataatcg aaccagtgaa gccgacgacg
    69961 gcggaatacg ccaacaggct gcccgtgccg ccccggctgt tgatgcccaa aaccgccaaa
    70021 acaatgttga ttacgaccaa aacagcgata ttggtagcca aaaacagaaa aattcgtttc
    70081 acggatgttc ctttttggta gggtgtgatg ttttgaaatt ttggggattg tcccaaaaag
    70141 ttgccggctt gtgaatatca gactcggcaa aggtatgcaa aacatttgct tgcaaatggc
    70201 agtttgtgca gttggttttt gaactattgt gccaagccgt gtagaatcgt aaaccatctg
    70261 tttgattcca ataaacacat ttcaaaggat cacttcatga aagcattatt tttaggcgcg
    70321 ccgggcgcgg gcaaaggcac tcaggcgcaa ttcatcaccg ccgcgttcgg cattccgcaa
    70381 atctctaccg gcgacatgct ccgcgccgcg attaaggcag gcacgccctt gggtttggaa
    70441 gcgaaaaaaa tcattgatga aggcggcttg gtgcgcgacg acatcattat cggcatggtc
    70501 aaagaacgca tcgcgcaaga cgactgcaaa aacggtttcc tgtttgacgg tttcccgcgc
    70561 acattggcac aagccgaagc gatggttgaa gcaggcgtgg atttggatgc agtcgttgaa
    70621 atcgatgtgc ctgacagcgt gattgtcgac cgcatgagcg gccgccgcgt gcatttggct
    70681 tccggccgta cttaccacgt tacctacaac ccgcccaaag ttgaaggcaa agacgacgta
    70741 accggcgaag atttgattca gcgcgacgac gacaaagaag aaaccgtgaa aaaacgcctt
    70801 gccgtttacc acgagcaaac cgaagttttg gtcgattttt acagcaaact ggaaggcgaa
    70861 cacgcgccta aatacatcaa agttgacggc actcagccgg tagaagccgt gaaagccgaa
    70921 gtattgggcg cattgggcaa ataaatcgaa aaggtcgtac ccacgggcag gcttcgcact
    70981 ctgaaaacag aaaatcaggt tttcagacga cctgtttttg ataaacagcg tgttgcaacc
    71041 gaaaaataat catttggcgt cattcccgcg caggcgggaa tccatttctg aatttgggca
    71101 atcgctgttt aaatctgatg aactgagttt tatcaatgga ttcccgccta cgcgggaatg
    71161 acggctgatg taccggttca aatttatccg aaacagtttg tcggaggctt gagtccgcgt
    71221 aggtcggaca tcaatgcccg acctacggtt tgaatttacg ttcttatagt ggattaacaa
    71281 aaatcaggac aaggcgacga agccgcaggc agtacaaaca gtacggaacc gattcacttt
    71341 gtgcttcagc accttagaga agcgttctct ttgaactaag gcgagacaac gccgtaccgg
    71401 tttaaagtta atccactata ctgcgaaaaa gacgataaag gtcgtctgaa aacccgaaac
    71461 gaaaacacca tgaatccttt aatctccgac ttccaaactc cgcaacaacg cacccccgtt
    71521 atcgtcgccc ttgatttttc caacgaaaaa gacacgctcg gattcgtccg caaccttgac
    71581 ccgacattgt gtcaaatcaa aatcggcaaa gagctgttta ccgcgacggg acgcaatttg
    71641 gcagaaagct taatcaatca aggtttcaaa cttttcctcg atttgaaata ccacgatatt
    71701 ccccacaccg tcgcgcaagc ctgcaaagtc gctgccgata tgggcgtttg gatggtcgat
    71761 atgcacgcat cgggcggccg ccgtatgatg gaagccgcag cagaagccgt tgccggatac
    71821 ggcacgaagc cgctcttaat cggcgtaacc gtgttgacca gcatggaaca aagcgatttg
    71881 gcggaaatcg gtttgaacac cgcccctgaa gaacaagtca tccgcttggc gaaactggcg
    71941 caaagttcgg gcttggacgg cgtggtctgt tccgcccaag aagccgcacc gctgcgccgc
    72001 gagttgggac aagattttgt cttggtcacg cccggcatcc gcttggacgt tgccggcaat
    72061 aatgatgacc agcgccgcat catgacaccg gccgaagcct tggctgccgc ttcgacttat
    72121 ttggtaatgg gtcgtcctgt aacccaagct gccgatccgg tagccgtatt gcgcgaagtg
    72181 aaccgcgtgg caaaccttga agcaaactga ttttcagacg gccttacagg ctgaggccgt
    72241 ctgaaaaaat acaacggagg caatatgtcc gccaagttcc aacaagaaac cctcaaatcc
    72301 cgtttcgcgc aagccaaagt cctggttgtc ggcgacgtga tgctcgaccg ctattggttc
    72361 ggcgatgtgt cccgtatttc gcccgaagcc cccgtgccgg tggcgaaaat cggacgaatc
    72421 gaccaacgcg cgggcggagc ggcaaatgtc gcgcgcaaca tcgcttcgtt gggcggcagg
    72481 gcagggctgt tgtccgtaac cggcaacgac gaagccgccg acgcgctcga tgcgctgatg
    72541 gtgcaggacg gcgtcgcctc ctatctgatg cgcgacaaac aaatcgccac caccgtcaaa
    72601 ctgcgcgtcg tcgcccgcaa ccagcagctt atccgtcttg attttgaaga acatcccaac
    72661 tgcgaagtgt tggaacaaat caagcagaaa taccgcgaaa tcttgcccga atacgacgca
    72721 atcatttttt cagactacgg caaaggcggc ctgtcgcata tctccgatat gatcgattgg
    72781 gcgaaacacg ccggcaaaac cgtcttaatc gaccccaaag gcgacgatta cgaaaaatat
    72841 gtcggtgcaa ctctgattac gcctaaccgc gccgaattga aagaagtggt cggcagttgg
    72901 aaaaacgaaa gcgagctgac cgaaaaagcg caaaacctgc gccgccacct cgacctgacc
    72961 gccgttttac tgacccgaag cgaagaaggc atgaccttgt tcagcgaagg cgaaccgatt
    73021 taccagccca cccgcgccca agaagtttac gacgtatccg gtgcgggcga caccgtcatt
    73081 gccggaatgg gcttgggttt ggcggcaggc tgcaccatgc ccgaagccat gtaccttgcc
    73141 aatactgcgg ccggggttgt cgtggcgaaa ctcggtacgg cggtttgctc gtttgccgaa
    73201 ttgatcaagg cattgtcagg gcaatcaaca atgtagtttt catattgata agataaacag
    73261 aacgatataa gtatgactat ttcgacaatg gcacagacac acgatactcg attacaaaaa
    73321 actttgctct ttcccagtca acaaggttgg aaatctaaaa cttttcttaa acctgattca
    73381 catattagat tagcaaccgt attcagcggg attggtgcgg ttgaacaggc attccaccga
    73441 ttaaatttaa accataccat tgtttttgca ggagatattg atccatacgt taaaaaaagt
    73501 tatcttggaa actataaatt aaatgaagat ttttggcata acgacattac tcaatttgat
    73561 gcgagaaagt ttagaaatca agttgatatt ttagttggag gcagtccttg ccaagcattt
    73621 tccatggttg gcaaacgtgc aggattagaa gatacacgag gaacattatt ctatgaattt
    73681 tctcgcgttg tggatgaagt ccaaccaaag atatttattt atgaaaatgt aaagggcttg
    73741 ctcaatcatg ataatggaaa aacttggaaa gttgtaaaaa gtgtttttta ttcacttggt
    73801 tatgacttat atttccaaat aatgaatagt aaggattatg ggattcctca acatcgtgag
    73861 cgtatttttg ttgttggctt tcatacccct cctataaatg gttttcagtt tcctgaaaag
    73921 attgaattag aacatactat gcaagatttt ttggaggact atactgatag caaatatttt
    73981 ttacgtgaaa agggtgtgaa atttgttacc agttctaaaa atagacaaaa acgttataca
    74041 cagattaatg gagaaattgc cttatgccaa aaagcaaatc aacaatttaa ttggcatggt
    74101 gattttattt ttcaggcagc ccgcgaatct gaatttgatg actttatttt tgatgtaaat
    74161 aacgttgagg aaaaatatta tctttctgaa aaaatcaaaa attatgtttt ggcaggagga
    74221 acaaaaaatt ttaaaaccag tacggaaact gatttgcctg tagctcgccc attattgcaa
    74281 actatgcata aaatgcatcg tgccggggtt gataattatg ttactcataa tcgtggacgt
    74341 attcgtaaat taacacctag ggaatgtttg cggctaatgg gttttagaga tgattttaaa
    74401 attttagtta gtgatactca aatgtatcgc caagcgggaa acagtattgt tgttgatgta
    74461 ttaatcgcta tattaaaaca aatggatatt acgctttatg gagagtaaaa tgccggattt
    74521 tcaaagaatt actattgaaa acatagagta ttttattgtc gatagtattc aaaatttacg
    74581 tgcggaagat agttttattc acaggaataa caagttatct gtttttggtg gtaatgggga
    74641 agcacgcaaa tatgtaggta gttatattga tgatagtggt cgaaaactaa gtacattttt
    74701 tgagtatgaa aattggggga ttactgagac aaaaaatgga aggagggtag aatatcctct
    74761 cattcagaaa aattgttttt ttaataagaa aaatttacag cgttatttgg ttgatgcaaa
    74821 agttgaatat cacaaacaag aacagaaata tcatcatgat atttcaaggt tttatgatga
    74881 ttacgtttta agtattaata atctgcctac agaaaatatt ttcttttcaa tccatgatgt
    74941 atcagaccat ttggaaaatt ctaaaggtta ccgtaggggt tatatccgtt cggaggatga
    75001 tatatggtca atttggcgta agattgtatt gcccaaaatt agttatttat caattcttaa
    75061 actattgcct gtcaaagata tagaagattc agaaccatta ttttatttcc gaatattttt
    75121 ggattatcaa tttcgctcta tcgtgcaccc gcaactctta tcaagagaaa aattagaaat
    75181 accggcttca gaatttaatc aattcgtaga gcaagaaatc attaaacaga aaagtagaaa
    75241 agggcagcag aaatatcgca aggatgttat aaatcatatg ccgcaatgtc catttacatt
    75301 aattacagat gaggttttgt taagggctag tcatattaaa ccttatatgg tttgtattac
    75361 tgagaaaaat gagaaagagg cattagatta tttaaatggg ttagctttaa cgccgactta
    75421 tgattggttg ttcgatcaag gttatattac tttcttggat gatggtcgtt tgatttgcgg
    75481 tactcgacta agccgttaca catgggaaaa acttaatatc aatccaaatg caaaaaataa
    75541 gatgagaata tatcccgaag gaagagaaaa atatttggaa tatcatcgca aatttgtgtt
    75601 tcaggacaat atcgatgatt tcttgtaact aagtttatta attttactca aaacaaagga
    75661 aaccgaatat gaccatcatc gtaacaggcg cggccggctt tatcggcagc aacatcgtca
    75721 aagcacttaa tcaacgcggt attaccgaca tcgtcgccgt cgataatttg agcaaaggcg
    75781 aaaaattcaa aaaccttgcc gagtgcgaaa tcgcccatta tctcgacaaa cacgaattca
    75841 tccgccaagt gagggaacac attttacctt atcaaaacat cgaagccgtt ttccatcaag
    75901 gcgcgtgttc cgatacgatg aaccacgacg gtttgtatat gatggaaaac aactaccagt
    75961 acacgctgga tttgttgaac tggtgtcagg acgaacgcat tcccttcctt tatgcctcca
    76021 gtgcggcggt ttacggcaaa ggcgaaatct tccgcgaaga gcgcgaactc gaaaaaccgc
    76081 ttaatgtgta cggctactcc aaattcctgt tcgaccaagt attgcgccgc cgcatgaaag
    76141 aaggtctcac cgcccaagtc gtcggcttcc gctacttcaa cgtttacgga caacacgaac
    76201 aacacaaagg ccgcatggca tccgtcacct tccaccattt ccaccaatac cgcgaacacg
    76261 gttacgtcaa cctgttcggc agcaatgacg gttacggcaa cggcgaacaa acccgcgact
    76321 ttgtcagcgt cgaagacgtt gccaaagtca acctctactt cttcgaccat cccgaacttt
    76381 ccggcatcta caacctcggt accggccgca gccaacagtt taacgaactc gccgccgcca
    76441 ccgtcaacgc ctgccgcgcc gccgaaggca agcctgaaat gagcttgaaa gagctggtgg
    76501 aagaagaact tatccgctac atccccttcc ccgacgcact caaaggcaaa taccagagct
    76561 tcacccaagc cgacatcacc aaattgcgtg aggcaggtta tacggaagaa tttttcgatg
    76621 tcaaatcagg cgtcgagcgc tacgtcaaat ggatgctgga aaatttggct taatttgaat
    76681 gcccgtaaaa aatcgtctga aaatatcagg cgattttgat ttgtttaact tttatatgga
    76741 tttcgatgat gaccgaaatg caacaacgcg cccaactgca ccgccaaatt tggaaaattg
    76801 ccgacgaagt acgcggcgcg gtggatggct gggactttaa acaatacgtt ctcggcacac
    76861 ttttctaccg ctttatcagc gaaaacttca ccgactatat gcaggcaggc gacagcagta
    76921 ttgattacgc cgctatgccg gacagcatca tcacgcccga aatcaaagac gatgccgtca
    76981 aagttaaagg ctatttcatc taccccagcc agcttttttg caatattgcc gccgaagccc
    77041 atcaaaacga agagctcaac accaagctga aagaaatctt taccgcgatt gaaagctccg
    77101 cctccggcta tccgtccgaa caagacatta aaggcctgtt tgacgacttc gataccacca
    77161 gcagccggct cggcagcaca gttgccgaca agaacaaacg ccttgccgcc gtcctcaaag
    77221 gcgtggcgga acttgatttc ggcagttttg aagaccacca catcgacctt ttcggcgatg
    77281 cctacgaata cctgatttcc aactacgccg ccaacgcagg caaatccggc ggcgaatttt
    77341 tcaccccgca aagcgtatcc aagctgattg cgcggctggc ggtgcacggg caggagaaag
    77401 taaacaaaat ctacgaccca gcttgcggct cgggcagcct gctcttgcag gcgaaaaaac
    77461 agtttgacga gcacatcatc gaagaaggct tcttcgggca ggaaatcaac cacaccacct
    77521 acaacctcgc ccgcatgaat atgtttctgc acaacgtcaa ttacaacaaa ttccacatcg
    77581 aattgggcga cacactgact aatcccaagc tcaaagacag caaacccttt gatgccatcg
    77641 tttccaatcc gccttattcc atcaactgga taggcagcga cgaccccacc ttaatcaacg
    77701 acgaccgctt tgcccccgca ggcgtactcg caccgaaatc caaagccgat tttgccttca
    77761 tcctgcacgc actgaactac ctttccggca gaggccgcgc cgccatcgtc tctttccccg
    77821 gtattttcta tcgcggcggc gcagagcaga aaatccgcca atatctggtg gagggcaact
    77881 acgtggaaac cgtgattgcc cttgcgccca atctctttta cggcaccggc atcgccgtca
    77941 atatcctggt tttgtccaaa cacaaagaca ataccgacat ccaatttatc gacgcaggca
    78001 gcttctttaa aaaagaaacc aacaacaacg tcttaaccga agaacacatt gccgacatcg
    78061 tcaaactctt cgccgacaaa gccgatgtgc cgcatatcgc ccaaaacgct gcccagcaaa
    78121 ccgtcaaaga caacggctac aacctcgccg tcagcagcta tgttgaaccc gaagacacac
    78181 gcgaaattat cgacatcaaa cagcttaacg ccgaaatcgg cgaaaccgtc gccaaaatcg
    78241 aacggctgcg gcgcgaaatt gacgaagtga ttgcagagat tgaggcctag gcagttgttg
    78301 catattttgc aacaactgaa tgggaaagag gccgtctgaa aatacgggcg gtaacctgta
    78361 agtaatcttt acaagttcaa atcaagaaat tttcggggaa aaatacatga caacagaaaa
    78421 caacgctttt gaaaacgcca aacacatcga cgaaacaggc aatgaatatt ggtcggtgtg
    78481 caccttgcag acaaagtagg gtgggcttca gccccccgaa acaacggcaa aacagcaggc
    78541 ggattgttgg gctggagccc accctacggc ggataaccgc cccacatccc gccgcagcgg
    78601 gaaagaaacg gaaaacaacc atggatatac aaagtaaagc gaaaaaattg attgagatga
    78661 ttcagacggc accggtggag tggaagccgt tgggggaagt ggcaagtata ggaaagggaa
    78721 agcagcttaa taaatcacta cttagagaaa aagataagta tcccgtaatc aatggcggta
    78781 ttaatccatc aggttattgg catgaataca ataacgaagc tggcacgatt gttattagcc
    78841 aaggaggagc aagtgcgggg tttgttaatt ggatggatat cccttttttt gcaggagctc
    78901 acgcatatac tattaaagcg aacgaagaca aactattgca acggtttgca tattattttt
    78961 aaaaatgaag caaattacat tcatgcaatg tcaatacgga gcaggtatac cagcacttgc
    79021 taaaagtgaa ttgcaaaact tacttattcc catcccgccc ctagaaaccc aacaaaaaat
    79081 tgtaaaaata cttgacaaat tcaccgagct ggaagcggaa ttagccctgc gcaaacgcca
    79141 ataccggtat taccgcgact ttcttttaga ttttgacaat caaatcgggg gggggatagc
    79201 tgatggctat caatgccgtc tgaaagatgt ggtttggaag acgttggggg agattgccga
    79261 atattcaaaa aaccgtattt gttcggataa actgaacgaa cataattacg tgggcgtgga
    79321 taatctctta caaaatagag aaggtaaaaa gttatccggt tatgttccaa gtgagggaaa
    79381 aatgacagaa tatattgcca atgacatctt gattggaaat attcgtccgt atttgaaaaa
    79441 aatctggcag gcagactgca cgggcggaac aaacggtgat gttttggtta tccgggtaac
    79501 agatgaaaag gttaatccaa aatatctgta tcaggtattg gccgatgata aattttttgc
    79561 ctttaatatg aagcacgcca aaggtgcaaa aatgccgcgt ggcagcaaag cagcgattat
    79621 gcaatataaa atccccatcc caccactccc cgaacaggaa aaaatcgtcg ccatcctaga
    79681 caaattcgac accctgaccc actccgtcag cgaaggcctg ccgtacgaaa tcgccctgcg
    79741 ccgcaaacaa tacgaatatt accgcgaaca gctgcttgcc tttcggtagg gtgggcttca
    79801 gcccaccgaa acagcagcaa gctgcaacaa cagtaaaaca acggcaggcg gggcggtggg
    79861 ctgaagccca ccctacggcg agcggcaacc gccccgcatt ccgccacagc gtgtggaaac
    79921 cggaaaatat ggcggcggat gctcaaaaca aagagaaaaa accgattgag atgattcaga
    79981 cggcatcggt ggggtagaag tcgcagacaa agtagggtgg gcttcagccc accgaaacag
    80041 cagcaagctg caacaacagt aaaacaacgg caggcggggc ggtgggctga agcccatcct
    80101 acgatggaca caaccgaccc gcattccgcc gcagccaacc aaagcagcct gcacattttc
    80161 aggcagccca atccgaacat caaaccgttt atagtgaatt aaatttaaat caggacaagg
    80221 cggcgagccg cagacagtac aaatagtacg gcaaggcgag ccaacgcagt accggtttaa
    80281 atttaattca ctataaaacc cgacaccgca aaggacgacc catatgaacc tcgaaactaa
    80341 acccatcgcc gaaacgccga atttcatcgt gctcgaccaa tatgaaaaaa tcgaacagtc
    80401 gggcagctac caatcggaaa accagttgga agcggagtta atcgccgatt tgcagaatca
    80461 gggttacgaa taccgcaagg atttgaacag ccaaagcagg ctgctggaaa acctgcgcgc
    80521 gcagttgcag cggctgaacg atgtggcgtt ttcagacggc gaatgggcgc ggtttttgac
    80581 ggaatatctg gacaggccgt ctgaaaacat taccgataaa acccgaaaaa tccacgacga
    80641 ccatatttac gatttcgctt ttgatgacgg ccgtctgaaa aatatttatc tgctggacaa
    80701 aaaaaacctt gcccgcaacc atgtgcagct tatcaaccag tttgagcaga cgggcacgca
    80761 tgcaaaccgc tatgacgtta ccgtgttggt aaacggcttg ccgctggtgc agattgaatt
    80821 gaaaaagcgc ggcgtggcgg tgcgcgaggc attcaatcag gtgcaccgtt acagcaaaga
    80881 gagcttcaac agcgaaaatt cgctgttcaa attcctgcaa atcttcgtga tttccaacgg
    80941 cacggatacg cgctatttcg ccaacaccac caagcgcgac aaaaacagct tcgatttcac
    81001 gatgaattgg gcgcggtcgg acaatcatcc gattaaggat ttgaaagact ttactgccac
    81061 gttcctgcag aaaagcgtat tgctgggcgt tttgctgcat tacagcgtgt tcgatgcgaa
    81121 tgatacgctg ctgattatgc ggccgtacca gattgccgcc gccgaacgca ttttgtggaa
    81181 aatcaacagt tcggcgcagg cgaagaattg gagcgggccg gaaagcggcg gctatgtctg
    81241 gcacaccacg ggcagcggca aaacgctgac cagcttcaag gcggcgcgtc tggcgacgga
    81301 atcggcgttt atcgacaagg ttttcttcgt ggtggacagg aaggatttgg actatcagac
    81361 gatgaaggaa taccaacgtt tttcgaccga cagcgtgaac ggttcggaaa gcacggcggg
    81421 cttgaaacgc aatttggaaa aagacgacaa caaaatcatc gttaccacca tccagaagct
    81481 gaacaacctg atgaagagtg aagataatct gccggtttat caccagcaag ttgtctttat
    81541 tttcgacgaa tgccaccgtt cgcaattcgg cgaagcgcaa aaaaacctga aaaagaaatt
    81601 taaaaaattc tgccagttcg gttttaccgg tacgccgatt tttcatgacc atatcgttga
    81661 tggcaaactg attatgaaag gcaatgcgct tggttcggag agtacggaaa gcgtatttgg
    81721 gagacagctg cattcttatg tgattaccga tgccatccgc gatgaaaaag tattgaaatt
    81781 caaagtggat tacaacgatg tgcgcccgca gttcaaagcc gtggaagcgg aacaggacga
    81841 gaagaaactg agtgccgccg aaaaccgcca agccctgctg catcctgaac gcatccgcga
    81901 aatcacgcaa tatatcctga accagttcag gcagaaaaca caccgcttga atgcgggcgg
    81961 caaaggcttt aacgccatgt ttgccgtcag cagcgtggat gcggcgaagt gctattacga
    82021 agcgttcaaa acacaacagg caggcagcct gcacccgctg aaagtggcca ccattttttc
    82081 ctttgccgcc aacgaagagc aaaacgccgt cggtgaaatt gccgatgaaa cctttgaacc
    82141 ggaagcgatg gacagcagcg caaaagaatt tttgcaggct gccatcaacg attacaacgc
    82201 ctgtttcaaa accaatttcg gcacggacag caaagccttt cagaactact accgcgattt
    82261 ggcaaaacgg gtaaaaaatc aggaagtgga tttgctgatt gtggtcggca tgtttttgac
    82321 gggttttgac gcgccgacgc tgaacacgct gtttgtcgat aaaaacctgc gctatcacgg
    82381 cctgatgcag gcgttttcgc gcaccaaccg catttacgat gccaccaaaa ccttcggcaa
    82441 cattgtctgc ttccgcgatt tggagcaggc aaccattgat gcgattacct tgtttggcga
    82501 caaaaacacc aaaaatgtag tgctggaaaa aagttacgaa gaatacatga acggctatat
    82561 cgacagccag accggcgaag cgcggcgcgg ctatttggat gtggcaaaag aattgcgcga
    82621 acgtttcccc gatcccgacg aaatcgaaac ggaaaaagac aaaaaagatt ttgccaaact
    82681 cttcggcgaa tacctgcggg cggaaaacgt attgcagaac tacgatgaat ttgccgcgct
    82741 gcgcgagttg cagaatgtgg atgcggcgga cgaagatgcg atgaaggcgt ttcaggaaaa
    82801 atactacctg agcgatgaag acgtgcagga aatgcggcaa gtgccgatgc cgtctgaaag
    82861 ggcggtgcag gactaccgtt ccgcctacaa cgacatccga gactggctga gccgccaaaa
    82921 agcaggcgaa cagaaagaac agtcaaaaat cgattgggac gatgtggttt ttgaggtgga
    82981 tttgctcaaa tcgcaggaaa tcaatttgga ttacatcttg caactggttt tcgagcatca
    83041 caaaaaaatc aaaggaaaag cggagctggt ggaagaaatc cgccgcatca tccgcgccag
    83101 catcggccac cgcgccaaag agggtctgat tgtggatttt atcaacgata cggatttgga
    83161 taaagtcccc gacgttcccg ccatactgga aaccttttac acctacgcgc aagaggtaat
    83221 gcggcacgaa gcggcaggat tgattgccgc cgaagacctg aacgaaaccg ccgccaaacg
    83281 ctatttgacc ggctcgctca aacgcggcta tgccagcgaa aacggtacgg aactgaccga
    83341 aaccctgccg aaaatgagtc cgctcaaccc gcaatatctg acgaagaaac aaagtgtttt
    83401 tcaaaagatt gcggcgtttg tggagaagtt tgccggaata gggaccgata tttgacaaaa
    83461 tgccgtctga acctttcaga cggcattttt gattttatgc ggaggcggtt tttattttga
    83521 ccttgctttt cttaaacttc aacacggctt cttcttttgc cgcatcccag tctatccgca
    83581 cgaagccgcc gtcggatagt ttgccgaaca ggagttcgtc ggcgagcggt ttgcggattt
    83641 tttcctgaat caggcggtgc atcgggcgcg cgcccatttg cgggtcgaaa cctttttccg
    83701 ccagatattt gtgcaatgcc gacgtgaatt cggcttcgac ttttttgtcg aggagctggt
    83761 gttcgagctg gagcaggaat ttgtccacga ctttgacgat gatgggttcg gacaagggtg
    83821 caaacgggat aatcgcgtcc aagcggttgc ggaactcggg cgtgaagagc ttgttgattg
    83881 cctgcatttc gtcgccgcgt tcgcgcttgg cggtaaagcc gaggctgggg cggctgaggc
    83941 tttccgcgcc tgcgttggtg gtcataatca ggatgacgtt gcggaaatcg gcactcttgc
    84001 cgttgttgtc ggtcagtttg cctgcgtcca tgacttgcag gaggacgttg aaaatgtcgg
    84061 ggtgggcttt ttcgatttcg tccaagagca atacgcaatg cggctgtttg ttgacggctt
    84121 cggtcaaaag gccgccttgt tcaaagccga cgtagcccgg tggcgcgccg atgaggcgcg
    84181 atacggcatg gcgttccatg tattcggaca tatcaaagcg ttgcagcggt acgcccagcg
    84241 agtaggcaag ctgtttggcg gcttcggttt tgcccacgcc ggtcgggccg gagaagagga
    84301 agctgcctat cggtttgtcg ggcagggcaa ggccggaacg cgacattttg acggcggcaa
    84361 ccagcgcgtc gatggcgttt tcttgaccgt aaaccatgtt tttcaaatcg cgaccgagga
    84421 attgcagcac ttgtttgtcg tcgtgcgaca cggttttttc gggaatccgc gcaactttgg
    84481 cgatgacggt ttcaatttgt gctttgccga tgactttttt ctgtttggat ttgggcagaa
    84541 tccgttgcgc cgcgcctgct tcgtccatca cgtcgatggc tttgtcgggc aggaaacgct
    84601 cgttgatgta gcgtgcggag agttcggcgg cggcttcgag tgcgccttgc gtatagcgga
    84661 cttggtggaa ggcttcaaac atcggcttca agccgcgcag gatttgtacg gtttcggaaa
    84721 cggtgggttc gaccacgtcg attttttgga agcggcggct taaggcgtgg tctttgtcga
    84781 aaatggtgcg gtattcgtcg taagtggtcg cgccgatgca gcgcagcgaa ccttttgcca
    84841 gcgcgggttt gagcaggttg gacgcgtcca tggtgccgcc gctggtgctg cctgcgccga
    84901 tgatggtgtg gatttcgtcg ataaacaaaa tggcgtgcgg gattttttcg agctgtttca
    84961 agacggattt gacccgcgct tcaaagtcgc cgcggtattt cgtgcccgcc aacagcgagc
    85021 ccatatccag cgcgtacact tcggcatctt tgagcgcgtc tggaatgccg ccgttgacga
    85081 tttgatgtgc caaaccttcc gccagcgcgg ttttgcccac gcccgcttcg ccgaccaaaa
    85141 gcggattgtt tttgcggcgg cggcatagga tttgcaccag ccgttccatt tcgtgtttgc
    85201 gaccaatcaa agggtcgata cggccggctt tgacttcggc gttgaggttg acggtgtacg
    85261 ccgataaagg gtttttgccc ggtttggtgc ggttttcatt atcgtcgtcc atgccgtctg
    85321 aagaatagtt gccatcgtct tcatcttcat cgggagagcc gtgggcaata cagcgcaaaa
    85381 cttcaaaacg cgtaaccgat tgcagcttga ggaaatagac ggtgtggctg tcggtttcgc
    85441 tcatcagcgc gaccaaaacg tccaacggtt cgactgcggc ttttccggca gactgggtat
    85501 gcaccatcgc ccgttgcatc acgcgttgga agccgagcgt gggccgtgtt tcgaccgtgt
    85561 ctaaaaggtg ttcgggaatc aggggggtgt tttcggcaac gctggcggcg agctgttcgg
    85621 acaccacttt caaatccgcg ccgcagagtt ttaagacgtt cggcacggag gcatcttctt
    85681 cgatgagtac caaaagcaga tgctcgaggc tgataaattc ataatgagcc ttacgcgcct
    85741 cgcggtaaag ctgctgcaaa atctgttcca attcgggtgc aagcatatta aatctcctcg
    85801 acaatacatt gcagcggatg cccttcggct tttgcccgct gcatgacttg ttgctgtttg
    85861 gtttgggcaa tatcgcgcgt gtaagtgccg cacaggcctt tgccttcgtg atgaaccaag
    85921 agcattaccg ctaccgcctg ttcttgtccg agcatgaaga tttcggtcag gatttcaacg
    85981 acaaattcca tcgtggtgta atcgtcgttc aataggaaaa cgccgtaacg tttcggcggc
    86041 agggtgttca gacggtgcaa gagcgtgtcg gattggtgtt gcgcggtcat agtgtgtccc
    86101 atttgaaagc cgcgttcaga cggcattttt gttgtatttt cggtactttt gcctattttc
    86161 ccactttttt gaaaacatag cttgacgttt tgtcttaaca aatgtaaaaa gacggttaag
    86221 caggattggg catccgccga gtatatcaag ctggaaggaa cgccagacgg ctcggtttgc
    86281 cgtatgcctt gttttgctga ttttgttaat ttttgagtat aggaagtttc taatggcaac
    86341 cggtatcgta aaatggttta acgacgctaa aggttttggt ttcatcacgc ctgatgaagg
    86401 cggcgaagat ttgttcgctc acttctcagc aatcaatatg gaaggtttca aaaccctgaa
    86461 agaaggccaa cgcgtctctt tcgacgtaac caccggccct aaaggcaaac aggccgccaa
    86521 cattcaggct gcttaattcc tgatgtacgg tcaaatgtat atttgaaaac ggcgggacag
    86581 gcaatgtccc gccgtttttg tctgccgttt tgccggcggc ggaaaaaccc caatccccgc
    86641 acgccttatc ctgaacttgt gtgtaccctg ttgtggacaa gtggcttagt attttgacgg
    86701 ataagggaaa atcagtgctg atgaaaaaat gtgcaatgtt gtcggcaaaa ggcggtgcgg
    86761 cataaaacgg caaacgggca ggcacggggc aaaacgtgct gccttcgtct tcagacggca
    86821 tcggcagggc gttcagcttc cggcaaccgt catccccgca atcagaatcg agccgatttt
    86881 gttggacgaa cgccgcaaag cgtcatccgc cacgccgaca atgtcgcggt acatatcctg
    86941 caagcgtccg gctacggtaa tctcgtggac ggggtaggca atcacgccgt tttccaccca
    87001 aaaacccgcc gcgccgcgcg agtagtcacc ggtaatggtg ttcgcgccct gtcccatcag
    87061 ttcggtaacc aataatcccg tccccatttc tttcagcagg tcggattgcg tttcgtgcgt
    87121 atggttcaaa tacaggttgt gcgcgccgcc ggcgttgccc gtggtctgca taccgagttt
    87181 gcgcgcgctg taactgctga ggaaatagcc ttcgacgatg ccgtcgcgga taacgaaacg
    87241 cggccgcgtg gcgacgcctt cggaatcgaa ataggtgctg ccgaaggcgc ggggaatatg
    87301 cggctcttcg cgcaggctga ggaaatcggg cagaacctgt ttgcctatgc tgtcgatcag
    87361 gaagctgctt tggcggtaga gcgagccgcc ggacagtgcg ccgacgaggt gtccgatcag
    87421 acctcccgaa acggtcgcat cgaataggac ggggtagctt ccggtcggaa tgctgcggct
    87481 gttcagacga cgtaaggtac gttcggcggc ggtttgaccg atttgcgtcg ggctgtccat
    87541 gtcttgatgg cggcaggagg aatcgtacca gtagtcgcgc tgcatgccgt tttcgtcggc
    87601 ggcaacgacg ctgcatgaaa tgctgtggcg tgtgccttgc tggtgtgcgg caaaaccgtg
    87661 ggtgttgccg taaacgtatt ggtaatgtcc ggtttgcacc gccgcccctt cggagttttc
    87721 gatgcgctca tcctcgttca gggcggcttg ttcgcattgt tttgccaact cgacggcggc
    87781 ttccgtatcc aaatcccatt cgtggtaaag gtcggggtcg ccgatgtgtt gcgccataag
    87841 cgaagcgtct gccaaacctg cgcaatcgtc ttcggcggtg tagcgggcga tgtcgatggc
    87901 ggctttgacg gtgtcttgca gggctttttc ggagaagtcg gcagtgctgg cgcggccttt
    87961 gcgtttgccg acgtaaacgg taatgtccag cgacttgtcc tgctggaact cgatttgttc
    88021 gatttcgccc agccgcacgc tgacgctttg tcccaatgat tcgctgaaat cggcttcggc
    88081 ggcggtcgcg cccgctgctt ttgccaagtc gagcgtgcgg cggcagaggt cgagaagttc
    88141 ggaagcggtg tggttgaaca gcatagaaat ctttcttggt ggagcgttgc ggcattttaa
    88201 ccgtttcggg cggcaggggc aaaagcgtgc cgtttgcagg gcggacggtg caaaatgccg
    88261 tctgaacgcg gaatcattct gttaaaatgc gcccgtcgga taaaatttga gaatgaagat
    88321 gtttgaacaa gaagacgaat gggtcagcaa aacccaaatg aaaaagcaga tgaacggttt
    88381 gcaggatttg ggtatggagc tgaccaagct ctcaagcgac acgttgaaaa aaatcggctt
    88441 ggacgaagat ttgtacgaag ccgtcgttac ctataaaaaa atcacatcca acggcgcgct
    88501 caagcggcag gcgcaattta tcggcagact gatgcgcgat accgatcccg cgcccatcga
    88561 ggcatttctt gccaagctgc gcggcgacga tgcggtgcac aatgcctttt tgcaacgcgt
    88621 ggaacaggcg cgcgtacggc tgttggcaga cgacggcgcg ttgacgcagt ttatgtcgga
    88681 ttttccgcat gcggacgcgg gcaagctgag gacgctcgtc cgcaacacca aaaaagagca
    88741 ggagcaaaac aaaccgccga aaaacttccg cgcgctgttt caagaattga aaaccgtgat
    88801 ggaaaacggg gacgcggaaa tttaggcata ttttcagacg acatccgccg ttatttagat
    88861 tggaggataa aatgttgttc cgtaaaacga ccgccgccgt tttggcggca gccttgatgt
    88921 tgaatggctg tacggcaatg atgtggggca tgaacgaccc gttcagccaa acgaccgcct
    88981 ataaacacgt tgacaaggat caaatccgcg ccttcggtgt ggttgccaaa gacaatgccc
    89041 aattggaaaa gggcagtctg gtgatgatgg gcgggaaata ctggttcgtc gtcaatcccg
    89101 aagattcggc gaagctgacg ggcattttga aggcagggct ggacaaaccc ttccaaatag
    89161 ttgaggatac cccgagctat gctcgccacc aagccctgcc ggtcaaactc gaatcgcctg
    89221 gcagccagaa tttcagtacc gaaggccttt gcctgcgcta cgataccgac aagcctgccg
    89281 acatcgccaa gctgaaacag ctcgggtttg aagcggtcaa actcgacaat cgaaccattt
    89341 acacgcgctg cgtatccgcc aaaggcaaat actacgccac accgcaaaaa ctgaacgccg
    89401 attaccattt tgaacagagt gtgcctgccg atatttatta cacggttact gaaaaacata
    89461 ccgacaaatc caagctgttt gcaaatatct tatatacgcc ccctcccttt ttgatactgg
    89521 atgcggcggg cgcggtactg gccttgcctg tcgcggcgtt gattgcagcc acgaattcct
    89581 cagacaaatg aacggcaatg ccgtctgaaa agccttcaga cggcatttca aacacatccg
    89641 cactgtaaag ttccacgcta tgtccgtcaa aatccaaacc cgatccgtca ataccgacgt
    89701 tttcaatcat ttgctcaccg ccggcgccga tcctttaatc gcccggcttt gtgcctcgcg
    89761 cggtgtgcaa agtcctgccg aattggacga caaactcgct tccctcctgc cttatcaaac
    89821 gctgacgaat tgcgaagccg ccgcccgccg tttggcggat gcggttgagc gtcaggaaaa
    89881 aatcttgatt gtcgccgact acgatgccga cggcgcgacc gcgtgtgccg tcggtttgga
    89941 cggtttggcg gcgatggggg caaaagtaga tttcctcgtg cccaaccgct ttgaacacgg
    90001 ctacggttta acgcccgagc tggccgaaat cgccgccgcg caaggcgtgg atttgctgat
    90061 tacggtcgat aacggcattg ccagcatcgc aggcgtggcg cgtgcgcagg aattgggttt
    90121 ggatgtgatt gtaaccgacc accatctgcc tgccgagacc gtgccagact gcatcatcgt
    90181 caatccgaac caaaaaggct gcggtttcca aagcaaaagc ttggcgggcg tgggcgtgat
    90241 tttttatgta ctgatggctt tgcgtgccga actgcgccgc cgcaattatt tttcagacgg
    90301 cctaaaagag ccgaatctgg gcgacctttt ggatttggtc gcactcggta ccgttgccga
    90361 cgtcgtctcc ctcgatcaca acaaccgtat cctcgtgtcg caaggtttga aacggatgcg
    90421 ttcgggcaaa atgcgccccg gtatccgcgc cttgtttgaa gtggcgcggc gcgactggcg
    90481 caaagcgcag ccgtttgata tgggctttgc gttggggccg cgcatcaatg ccgccggacg
    90541 gttggacgat atgtcggtcg gcattgcctg tctgttggcg cgagatgatg tggaagcgca
    90601 ggaactggcg gctcagttaa acaacctcaa tatcgagcgt cgcgaaatcg agcagtctat
    90661 gctgcaagac gcgctgaatg cttttcctga aaccctgcct tcaggtcaga cgactttggt
    90721 ggcgtatcgc gacgacttcc atcaaggtgt ggtcggcatt gtcgccagcc gcctcaaaga
    90781 ccgtttttat cgtccgacca tcgtgtttgc gcctgccgac aacggcgaag tacgcggttc
    90841 gggacgttcc attcccaatt tgcacctgcg cgatgctttg gacttggtgt ccaaacgcca
    90901 tcccgatttg attttgaaat tcggcggaca cgcgatggcg gcgggtttga gcatacttga
    90961 acacaacatt cccgcgtttc agacgtcctt tgaagaagcc gtgcgcgaaa tggtgtgcga
    91021 agacgatttg tcgcaaacct tcatcaccga cggcagcctg cccgcctgcg acatcacgtt
    91081 ggaacaggcg caaaaccttg cccgtcacgt ttgggggcag ggcttcgcgc cgccgagctt
    91141 taccgacgag ttccacgtcg tccgccagca acctttgggc gcggagggca aacacaaaaa
    91201 agtctggctg caaaaagacg gctgcgaatt tgaagccatg ttttggcgtt gcagcgaaga
    91261 catccccgaa tacatccgca cggtttaccg ccccgttgcc aacgaatggc gcaacaatct
    91321 cgaattgcag ctgtatatcg attactggga agcggtgtag aggcggcgga acgccgtttg
    91381 aatgtgattt ctgttccttc atttgcctgt ttgtacgacg ggaatgttcc caatcggaaa
    91441 agaaagtaaa gggcgttaat ttttgttaat catcccttct tagggacgca atatataagg
    91501 tgcatcaaat ttcagactcc ggcggatttg catttgaagt gcaactttcc ctaacagaaa
    91561 aaggccagta tgcggtagca tacg
//
LOCUS       DBBZXW010000002        64043 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.002, whole genome shotgun sequence.
ACCESSION   DBBZXW010000002 DBBZXW010000000
VERSION     DBBZXW010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 64043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64043
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.002"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(141..216)
                     /locus_tag="ACJJD2_000100"
     tRNA            complement(141..216)
                     /locus_tag="ACJJD2_000100"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(181..183),aa:Phe,seq:gaa)
     gene            complement(407..1141)
                     /gene="lptB"
                     /locus_tag="ACJJD2_000101"
     CDS             complement(407..1141)
                     /gene="lptB"
                     /locus_tag="ACJJD2_000101"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HGG7578732.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(1215..1745)
                     /gene="lptA"
                     /locus_tag="ACJJD2_000102"
     CDS             complement(1215..1745)
                     /gene="lptA"
                     /locus_tag="ACJJD2_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HGG7578733.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(1726..2307)
                     /gene="lptC"
                     /locus_tag="ACJJD2_000103"
     CDS             complement(1726..2307)
                     /gene="lptC"
                     /locus_tag="ACJJD2_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HGG7578734.1"
                     /translation="MKIRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(2304..2840)
                     /locus_tag="ACJJD2_000104"
     CDS             complement(2304..2840)
                     /locus_tag="ACJJD2_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HGG7578735.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(2905..3879)
                     /locus_tag="ACJJD2_000105"
     CDS             complement(2905..3879)
                     /locus_tag="ACJJD2_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HGG7578736.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTIAAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            3975..5030
                     /gene="tal"
                     /locus_tag="ACJJD2_000106"
     CDS             3975..5030
                     /gene="tal"
                     /locus_tag="ACJJD2_000106"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HGG7578737.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRAACGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALEILVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWEQYFTTPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDNL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLANRLQED
                     GLKQFEEAFEKLLAPLV"
     gene            5184..5474
                     /locus_tag="ACJJD2_000107"
     CDS             5184..5474
                     /locus_tag="ACJJD2_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578738.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYRELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            5491..6378
                     /gene="gluQRS"
                     /locus_tag="ACJJD2_000108"
     CDS             5491..6378
                     /gene="gluQRS"
                     /locus_tag="ACJJD2_000108"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HGG7578739.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQTGARRGADGFVYNGRCRNPQQRPALQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLDVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLNLPEAPEADRPAELLD
                     WAVAHWDMGKVPKHAITAP"
     gene            complement(6448..7458)
                     /gene="dusA"
                     /locus_tag="ACJJD2_000109"
     CDS             complement(6448..7458)
                     /gene="dusA"
                     /locus_tag="ACJJD2_000109"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HGG7578740.1"
                     /translation="MNDNTQTLPPRRLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPS
                     PRVQKGAFGACLMNEVGLVADCLNAMQDAVKIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EEIAQHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQRLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKNARTWRRMLSDATLLKDNDGGLILEAWKEVERANM
                     RE"
     gene            complement(7489..7980)
                     /gene="dtd"
                     /locus_tag="ACJJD2_000110"
     CDS             complement(7489..7980)
                     /gene="dtd"
                     /locus_tag="ACJJD2_000110"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HGG7578741.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADATSGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(8054..8812)
                     /locus_tag="ACJJD2_000111"
     CDS             complement(8054..8812)
                     /locus_tag="ACJJD2_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7578742.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            complement(8883..9749)
                     /locus_tag="ACJJD2_000112"
     CDS             complement(8883..9749)
                     /locus_tag="ACJJD2_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7578743.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEIKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(9798..10076)
                     /locus_tag="ACJJD2_000113"
     CDS             complement(9798..10076)
                     /locus_tag="ACJJD2_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HGG7578744.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(10076..10366)
                     /locus_tag="ACJJD2_000114"
     CDS             complement(10076..10366)
                     /locus_tag="ACJJD2_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HGG7578745.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(10369..10899)
                     /locus_tag="ACJJD2_000115"
     CDS             complement(10369..10899)
                     /locus_tag="ACJJD2_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HGG7578746.1"
                     /translation="MKFVSDLFSVILFFATYTVTKNMITATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            11188..13599
                     /gene="tspA"
                     /locus_tag="ACJJD2_000116"
     CDS             11188..13599
                     /gene="tspA"
                     /locus_tag="ACJJD2_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HGG7578747.1"
                     /translation="MKNNRQIKLIAASVALAASFQAHAGLGGLNIRSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSAQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAHNGKTHTVRKGETLKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAADDLSALLQPAEALSVEENITETVAETPDFNATADDLS
                     ALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPDFNATADDLSA
                     LLQPAEVPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNN
                     ADTSFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALA
                     QELGI"
     gene            complement(13772..14188)
                     /gene="gloA"
                     /locus_tag="ACJJD2_000117"
     CDS             complement(13772..14188)
                     /gene="gloA"
                     /locus_tag="ACJJD2_000117"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HGG7578748.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(14213..15382)
                     /gene="lapB"
                     /locus_tag="ACJJD2_000118"
     CDS             complement(14213..15382)
                     /gene="lapB"
                     /locus_tag="ACJJD2_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HGG7578749.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(15393..15707)
                     /locus_tag="ACJJD2_000119"
     CDS             complement(15393..15707)
                     /locus_tag="ACJJD2_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HGG7578750.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKVDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            16017..17015
                     /gene="ilvE"
                     /locus_tag="ACJJD2_000120"
     CDS             16017..17015
                     /gene="ilvE"
                     /locus_tag="ACJJD2_000120"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HGG7578751.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYSSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALIE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(17200..17985)
                     /gene="fabI"
                     /locus_tag="ACJJD2_000121"
     CDS             complement(17200..17985)
                     /gene="fabI"
                     /locus_tag="ACJJD2_000121"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HGG7578752.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELGSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(18140..18961)
                     /gene="dapD"
                     /locus_tag="ACJJD2_000122"
     CDS             complement(18140..18961)
                     /gene="dapD"
                     /locus_tag="ACJJD2_000122"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HGG7578753.1"
                     /translation="MSLQNIIETAFENRADINPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEILNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQASPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(19128..20771)
                     /gene="pgi"
                     /locus_tag="ACJJD2_000123"
     CDS             complement(19128..20771)
                     /gene="pgi"
                     /locus_tag="ACJJD2_000123"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG7578754.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALEFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHITVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            21281..22513
                     /gene="pilG"
                     /locus_tag="ACJJD2_000124"
     CDS             21281..22513
                     /gene="pilG"
                     /locus_tag="ACJJD2_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HGG7578755.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            22587..23447
                     /locus_tag="ACJJD2_000125"
     CDS             22587..23447
                     /locus_tag="ACJJD2_000125"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HGG7578756.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            23449..24081
                     /gene="coaE"
                     /locus_tag="ACJJD2_000126"
     CDS             23449..24081
                     /gene="coaE"
                     /locus_tag="ACJJD2_000126"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HGG7578757.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFVSLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLCEKTMRLHAFYSGIFASKPTQGKHND"
     gene            24074..24283
                     /locus_tag="ACJJD2_000127"
     CDS             24074..24283
                     /locus_tag="ACJJD2_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HGG7578758.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSSQTESLPEISEPDMAYR"
     gene            complement(24368..26038)
                     /gene="pilB"
                     /locus_tag="ACJJD2_000128"
     CDS             complement(24368..26038)
                     /gene="pilB"
                     /locus_tag="ACJJD2_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HGG7578759.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGQEEEESHTLYI
                     DNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPIAV
                     RGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMRIL
                     NSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNTES
                     VNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETADI
                     AIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSSCK
                     QEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEEMQ
                     RVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
     gene            26263..26991
                     /gene="rpe"
                     /locus_tag="ACJJD2_000129"
     CDS             26263..26991
                     /gene="rpe"
                     /locus_tag="ACJJD2_000129"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HGG7578760.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            complement(27014..28045)
                     /gene="ruvB"
                     /locus_tag="ACJJD2_000130"
     CDS             complement(27014..28045)
                     /gene="ruvB"
                     /locus_tag="ACJJD2_000130"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HGG7578761.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQH
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLATIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDVQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(28127..28435)
                     /locus_tag="ACJJD2_000131"
     CDS             complement(28127..28435)
                     /locus_tag="ACJJD2_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578762.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            complement(28658..29911)
                     /locus_tag="ACJJD2_000132"
     CDS             complement(28658..29911)
                     /locus_tag="ACJJD2_000132"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HGG7578763.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYAGFSFHTDKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYKFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRSQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
     gene            complement(29996..31624)
                     /locus_tag="ACJJD2_000133"
     CDS             complement(29996..31624)
                     /locus_tag="ACJJD2_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HGG7578764.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGSRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            31774..32148
                     /locus_tag="ACJJD2_000134"
     CDS             31774..32148
                     /locus_tag="ACJJD2_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HGG7578765.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQMPSEAEICS
                     WLEQVPLETLLNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFNRQAPCRQG"
     gene            32202..33740
                     /locus_tag="ACJJD2_000135"
     CDS             32202..33740
                     /locus_tag="ACJJD2_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HGG7578766.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQADGGGPSRDAVFQSLLQRAYLKQGAKLLGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKLSFEQEKAAVENELKMKKAVADFN
                     KAKEKLSDDAFNHPASLAEAAKNSSLKVETQETWLSRQDAQMSGLPENLINAIFSDDV
                     LKKKHNSEVLSINNEIAWVVRAKEVREEKTLPFAEAKDAVRQAYIRAEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPTNGKPAYVRLTGLP
                     APVIVEVQAITPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GGGQ"
     gene            33807..34424
                     /gene="recR"
                     /locus_tag="ACJJD2_000136"
     CDS             33807..34424
                     /gene="recR"
                     /locus_tag="ACJJD2_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HGG7578767.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVHHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEVANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(34480..34758)
                     /locus_tag="ACJJD2_000137"
     CDS             complement(34480..34758)
                     /locus_tag="ACJJD2_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578768.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSGSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            34963..36210
                     /locus_tag="ACJJD2_000138"
     CDS             34963..36210
                     /locus_tag="ACJJD2_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HGG7578769.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTAKLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            36203..36898
                     /gene="lolD"
                     /locus_tag="ACJJD2_000139"
     CDS             36203..36898
                     /gene="lolD"
                     /locus_tag="ACJJD2_000139"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HGG7578770.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEILAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKKREEAAETAMAMLEKVGLKHRSAHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            36966..38711
                     /gene="recD"
                     /locus_tag="ACJJD2_000140"
     CDS             36966..38711
                     /gene="recD"
                     /locus_tag="ACJJD2_000140"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HGG7578771.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAIRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPLDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSHKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSHVRRKMNIPEHQAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEETFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(38739..39842)
                     /locus_tag="ACJJD2_000141"
     CDS             complement(38739..39842)
                     /locus_tag="ACJJD2_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7578772.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLGLRPADFLEKAFIRAGLRVADMM
                     KTKPKHKKAANPSDPLAFARTRETTFLYRLKKA"
     gene            40093..42555
                     /gene="lon"
                     /locus_tag="ACJJD2_000142"
     CDS             40093..42555
                     /gene="lon"
                     /locus_tag="ACJJD2_000142"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HGG7578773.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELLVEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DKKRLSETKKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLASDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFSKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNFKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEP
                     SGAEAVAESASKPKPRSRATKH"
     gene            42737..43006
                     /locus_tag="ACJJD2_000143"
     CDS             42737..43006
                     /locus_tag="ACJJD2_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HGG7578774.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(43065..43499)
                     /locus_tag="ACJJD2_000144"
     CDS             complement(43065..43499)
                     /locus_tag="ACJJD2_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578775.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQISSFGKLGAQEQLDLLGGANAFETRDKQCVADLKSE"
     gene            complement(43492..44799)
                     /locus_tag="ACJJD2_000145"
     CDS             complement(43492..44799)
                     /locus_tag="ACJJD2_000145"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HGG7578776.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            44996..45367
                     /locus_tag="ACJJD2_000146"
     CDS             44996..45367
                     /locus_tag="ACJJD2_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HGG7578777.1"
                     /translation="MLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVHKDSVCLSQ
                     CRTLSDLTPENLLSDIKPVDYLEILIIGTGAAQEFIHPKIMADFSRIGIGVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            45444..47366
                     /locus_tag="ACJJD2_000147"
     CDS             45444..47366
                     /locus_tag="ACJJD2_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7578778.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQTLQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYNPEHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            47832..48347
                     /locus_tag="ACJJD2_000148"
     CDS             47832..48347
                     /locus_tag="ACJJD2_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578779.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(48637..48762)
                     /locus_tag="ACJJD2_000149"
     CDS             complement(48637..48762)
                     /locus_tag="ACJJD2_000149"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578780.1"
                     /translation="MLERHRNARFMAHMDNFLPNWQSIKQQLNALELFAQIYNLT"
     gene            complement(48913..49857)
                     /locus_tag="ACJJD2_000150"
     CDS             complement(48913..49857)
                     /locus_tag="ACJJD2_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HGG7578781.1"
                     /translation="MAHPDYAAFKAGHLAKFAAWHTQNDLAAIQPGRLIRKWSESLLD
                     AFKPGSLIEEYDFYQILTDYWAETLQDDVYLIAQDGWKAVKNLAEITKESDEAANLTV
                     VFEETETDKKGKAKTKRISKKYRSEVIAPELVARRYFSDGIAKLEEKQSELERLSQEL
                     ENHIEEHGGEEGALNDVLDAKGKLSAKLLKTALEESGIEEGERAVLQTTQTLMTQEKA
                     AKDAVKTQIEALNLAVFKQFGRLSEAEIKQLAVQDKWLADLQSRIENRLENSIQQLIS
                     RLNTLEDRYRSPMAELAREVEKWQSKVNAHLENMGFGG"
     gene            complement(50205..50838)
                     /locus_tag="ACJJD2_000151"
                     /pseudo
     CDS             complement(50205..50838)
                     /locus_tag="ACJJD2_000151"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
     gene            complement(50751..51149)
                     /locus_tag="ACJJD2_000152"
     CDS             complement(50751..51149)
                     /locus_tag="ACJJD2_000152"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG7578782.1"
                     /translation="MIDVTDFNDEDKLGKGKEMIDRLSRLVGIFKKLNLSSNQAEDDD
                     LLGDAYEYLMRHFATESGKSKGQFYTPAEVSRIMAKIIGISADCRPAPAFMTRPAARV
                     RCCSKPPPKPAAKSAFTVRKKMWQPRPLPV"
     gene            complement(51310..51969)
                     /gene="ung"
                     /locus_tag="ACJJD2_000153"
     CDS             complement(51310..51969)
                     /gene="ung"
                     /locus_tag="ACJJD2_000153"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HGG7578783.1"
                     /translation="MDTWHDALGNEKRQPYFQEILNAVRQERLSGQIIYPPAEDVFNA
                     FRLTAFDRVKVVILGQDPYHGAGQAHGLAFSVRQGVRIPPSLLNIYKELETDINGFSI
                     PDHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLAAHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSQHGIEPINWK
                     L"
     gene            52050..52457
                     /locus_tag="ACJJD2_000154"
     CDS             52050..52457
                     /locus_tag="ACJJD2_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HGG7578784.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDAGQYAEILRHAGGNRYEVFYRGT
                     HWQAQNTGQDVFEPGTRALIVRKEGNLLIITHP"
     gene            52472..53419
                     /locus_tag="ACJJD2_000155"
     CDS             52472..53419
                     /locus_tag="ACJJD2_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stomatin-like protein"
                     /protein_id="HGG7578785.1"
                     /translation="MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(53666..54736)
                     /locus_tag="ACJJD2_000156"
     CDS             complement(53666..54736)
                     /locus_tag="ACJJD2_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HGG7578786.1"
                     /translation="MYRRKGWGIKPWMGAGAAFAALVWLIFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIS
                     FMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            54921..55196
                     /locus_tag="ACJJD2_000157"
     CDS             54921..55196
                     /locus_tag="ACJJD2_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HGG7578787.1"
                     /translation="MTEQENKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            55198..55821
                     /gene="lipB"
                     /locus_tag="ACJJD2_000158"
     CDS             55198..55821
                     /gene="lipB"
                     /locus_tag="ACJJD2_000158"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HGG7578788.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLVGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            55814..56797
                     /gene="lipA"
                     /locus_tag="ACJJD2_000159"
     CDS             55814..56797
                     /gene="lipA"
                     /locus_tag="ACJJD2_000159"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HGG7578789.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQATEALRESHGGCGHH"
     gene            57260..57724
                     /gene="bfr"
                     /locus_tag="ACJJD2_000160"
     CDS             57260..57724
                     /gene="bfr"
                     /locus_tag="ACJJD2_000160"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HGG7578790.1"
                     /translation="MQGNQAVLDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            57752..58225
                     /gene="bfr"
                     /locus_tag="ACJJD2_000161"
     CDS             57752..58225
                     /gene="bfr"
                     /locus_tag="ACJJD2_000161"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HGG7578791.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            58550..58870
                     /locus_tag="ACJJD2_000162"
     CDS             58550..58870
                     /locus_tag="ACJJD2_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7578792.1"
                     /translation="MMGNKLTPPAKLPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            58918..61476
                     /gene="glnD"
                     /locus_tag="ACJJD2_000163"
     CDS             58918..61476
                     /gene="glnD"
                     /locus_tag="ACJJD2_000163"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HGG7578793.1"
                     /translation="MPANLSSALETFKRQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWVEHFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTVDKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNANRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNPENRRRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIIGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTGEESDLLAWLVENHLLMSAVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSLDLKNPKIQSSLKQTLLEQLS"
     gene            61567..62028
                     /locus_tag="ACJJD2_000164"
     CDS             61567..62028
                     /locus_tag="ACJJD2_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578794.1"
                     /translation="MNIIMDSTRKFGILWEENSECNGFIYGKIQIIIGENIYPKICPY
                     GYFTLNAVFNSLKSSFEEKYYAGGNNGLDFGEQLFDIDKYNSLELCNIFSIDTTYMSG
                     GGNCEIDCLVLEMGYSGEEERLFYSFDNGKNFKEIRYKKGTVESVIFQLNL"
     gene            62074..62154
                     /locus_tag="ACJJD2_000165"
                     /pseudo
     CDS             62074..62154
                     /locus_tag="ACJJD2_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798803.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            62355..63818
                     /gene="guaB"
                     /locus_tag="ACJJD2_000166"
     CDS             62355..63818
                     /gene="guaB"
                     /locus_tag="ACJJD2_000166"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HGG7578795.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
BASE COUNT        15403 a        17485 c        16633 g        14522 t
ORIGIN      
        1 caacgctgta ccggtttaaa tttaatccac tatacctgcc cgacagccgc aaagaccgta
       61 tcatacatag caggcattgc ggtgcgggat tactgccgca aacggcaggc aaaaaaaata
      121 accgcttcaa ggcggttttt tggtggccag aggcggaatc gaaccgccga cacacggatt
      181 ttcaatccgt tgctctacca actgagctat ctagccttta tctgtcttgt taagagatgc
      241 gtattaaacc aaatttcggg acaacacgca agcggatttg tcgatatttt ttatccaacc
      301 gactaagtcg atgttttaag tttaaattaa tttcacagaa aaatagtgca aatcggtttt
      361 ttgccgtttg ttcggcgata ttctgctttt cagacggcaa aacgcttcaa tatttgaagt
      421 tcttacccag ataaacagaa cgaacctgtt cgtttccgac caaatcatca ggttttcccg
      481 atgccagcac cgcaccgtct gaaatgatgt aggcgcggtc gcagatgctg agggtttcgc
      541 ggacgttgtg gtcggtaatc agtacgccga tgccgcgcga tttgaggaaa ccgatgattt
      601 tctggatgtc gatgacggca atcggatcga cgccggcaaa aggttcgtcc aacaaaataa
      661 aatgcggttt catggcgagt acgcgggcga tttcgacgcg tcggcgttcg ccgccggaca
      721 gcgacggcgc ggggctgcgg cgcaagtgtc cgatattaag gtcggcgagc agtttttcga
      781 tttccctgtc gatttgattt ttatctttgg ttctgatttc caagatggcg cggatgtttt
      841 gttcgacggt cattttgcgg aatatcgagg cttcctgcgg caggtagccg acaccgaggc
      901 gggcgcgttc gtgtatgggc aggtgacgca attcctgccc gtccagcatc acgctgcccg
      961 catcggcggc aatgagtccg actatcatgt agaagctggt ggttttaccc gcaccgttgg
     1021 gcccgagcag tccgatgact tcgccgcttt cgatttcgag ggagaagctt ttaacgactt
     1081 ggcgtttttt aaaacttttt tgcaggtttt gaacaacaag gcggctgacg tttgcgctca
     1141 taaatatctc ttcaatatct tcggtcggca tatgccgtcc gaaccgggtt tatgtttcag
     1201 acggcatttt gggattattc ggatttttgc gtactcgaag gctggataac gacgctgacc
     1261 ctgccggatt tggaagcgga ttttgcgccg gattttgtgc tgccgctgat ggtatagact
     1321 tcggttttgg tgttgtatgt aatcaccgca ccttcggcga catcgccgcc gcgctgtact
     1381 ttggcattac cggttaagac tacggtgctg cctgcagatg aataagcaac gttgtttgcc
     1441 tgtccgcgca ccgtgccttt gccgccgtcc aatgtctggc tgaagcggac tggcgaacct
     1501 tccgccctca cggattcgcc gcctttgccg ccgcgtgtaa cattgacgcg ggcggcggaa
     1561 atattgagcg taccctgtct gatgacgacg tttccgctga atgtggtgct ttggttggct
     1621 tgatcgagcg aaccttggtc ggcctcaatc tgaataggct gcctgctgtc gctttgaagg
     1681 gcaaaagcgg gggacgccga aaaaaatgct attaaaacaa atagcttaca tatcttttgt
     1741 atcataaatc gtggctttca ctttagatga gaagttcaac atgcctgttt tgtggtcgta
     1801 agtcatgccg cccgcctgac cgtgcgatgc accatattgg aaactgacag gcgtatcggt
     1861 ttgggcatat tgagattcgg tatcgacgtg cagcttttcg gcttcaactt tacccgcctg
     1921 ccgtttgccg tcggcggttt tggtcagcac aacgttgttt ttaaaaagaa cctgtttgtt
     1981 ttcggtatgg taaacggctt cgtcgctgcc gacttcgtac aacaacctgc cttcttggaa
     2041 gaacacgaga tgcggcgaat caaaatggat gtcgctgctt tcgggaaact gtttcgcgcc
     2101 tttcgcgctc aaatgttctt ttaagtatcc ctgttcgtca aaccgcctgc catccaatcc
     2161 gtccattgtg tattgcggtt cgtcgggatt gagcctgact tcttcaatct cgacttcgct
     2221 gatgcgtccc aaccatgccg acaggctgcc caaggcaacc gccaatatca atgggaacgc
     2281 aattccgtac cgccatctta ttttcatttg atgtactcgt tcaaagccgc gcccaaagtc
     2341 ccttgcgcct gcataatcag gtcgcacact tcgcgcaccg cgcccgcacc gccggggcgt
     2401 ttggcaatat aggcggcgtg ttgcagcgta aaccaatgcg cgtcggggac ggcaaccggc
     2461 aatccgcaac gcaccatcac cggcaaatcg accacgtcgt cgccgacaaa ggcacactcg
     2521 gcttcttcca cgccgacctg agcgcgcagc tcttcatacg cggcgcgttt gtccgaaatg
     2581 cctttgaagt agtaatttat gcccaactgt ttgacgcgga tgccgacgga gggcgcgtcc
     2641 cgacctgtga taatcgcagt ctgcacgccg cttgcctgaa gcattttcag accgtgtccg
     2701 tccagtgtgt gaaacgattt gatttcttcg ccgttatcgc ggataaagat gcgcccgtcg
     2761 gtcaaaacgc cgtccacatc caggatcagc agtttgattt tggcggcgcg cgcctgtaat
     2821 tcgggagaaa ttgcctgcat gggatttcct tgttttcaga cggcatatct taccacaaat
     2881 gccgtctgaa acggctgcaa cgccttatac aatccgcgcc gccaaaaggt cgtgcatatt
     2941 cagcgcaccg atcagcacgc cgtctgcatc ggtaaccaga agcccgttca catggtttgc
     3001 ctgcatgact ttcagggctt cggtggcgag gcgttcggcg gcgatggttt tagggtgtgt
     3061 atgcatgact tcgtctatcg aaagaccggt aaaattgtcg cattcttgaa acaggcggcg
     3121 caaatcgccg tcggtgaata cgcctttcag acggccttgc ccgtccgtta ccgccagcat
     3181 ccccagccct ttttcactca tgctgacgat ggcttctttc aagggcgtgc cgagtcggac
     3241 ggcaggcagg ccgccgcctt tgtgcataat gtcggcaacg cgcaaaagta ggcgtttgcc
     3301 gaggctgccg gcaggatggc tcaaggcgaa atcgtcgggc gtgaacgcgc gtgcgcgcag
     3361 caggacgacc gccaacgcat cgcccaaagc catgacggcg gtggtgctgg tggtcggggc
     3421 aagccccagc gggcaggctt ctttggaaac cgacgccgtg atgtggatgt cggcatggcg
     3481 cgccatggtt gaatcggggc gggcggtgat gcagacaagc gtgatgtctt tgcgtttgag
     3541 cgcggggatg atggcggcga tttcgtcgct ttcgccggaa ttggaaatcg cgacgaccac
     3601 gtcgttgtcc acaatcatgc ccaaatcgcc gtgtgccgct tccgcagggt ggacgaaaaa
     3661 cgcgggcgtg ccggtcgagg ccatggttgc cgccattttg cgcccgatat gtcccgactt
     3721 gcccatgccc gtgataacaa ccctgccctt gcagtgcaac aacgcgtctg ccgcaaggac
     3781 gaagttttcg tccaattccg ctgcaatttc gcgcaagcct tccgcttcgg tgtgcaacac
     3841 ttcgcgcgcc cagtcgagat attttccgtt ttctgccatt gccatccgcc tttgctgtaa
     3901 caaaactacc caaaatttcc gaatcggggt agcataagca ttcaaacccc gccatccatc
     3961 caaaggaatc agaaatgact attttatcgg acgttaaagc attaggacaa caaatctggc
     4021 tggacaacct ttcccgctcg ctcgtgcaaa gcggcgaatt ggcgcaaatg ctgaaacaag
     4081 gcgtgtgcgg cgtaacttcc aatcccgcca tcttccaaaa agccttcgcc ggcgacgcgc
     4141 tttacgccga tgaaatcgcc gccctcaagc agcaaaacct cagccccaaa caacgctacg
     4201 aaaccatggc ggttgccgat gtgcgtgccg cctgcggcgt ttgccttgcc gaacacgaat
     4261 ccaccggcgg caaaaccggt ttcgtcagcc tcgaagtttc gcccgaattg tccaaagacg
     4321 cgcaaggcac ggtagaagaa gcgcgccgcc tctacgccgc catcgggtgc aaaaacgcga
     4381 tgattaaagt gcctgccacc gacgcaggca tcgatgcgct cgaaatcctc gtttcagacg
     4441 gcatcagcgt aaacctcacg ctgctgttct cacgcgccca aaccctcaaa gcctacgccg
     4501 cctacgcgcg cggcattgcc aaacgcttgg cagccggaca aagcgttgcc catatccacg
     4561 tcgtcgccag cttcttcatc tcccgtgtgg acggcgcgct ggacacaacg ctgcccgacc
     4621 acctcaaagg caaaatcgcc atcgcccttg ccaaagccgc ctatcaagat tgggaacaat
     4681 atttcaccac ccccgaattt gccgcactgg aagcccaagg cgcaaaccgc gtgcagcttt
     4741 tatgggcatc taccggcgtg aaaaacccag cctatcccga cacgctctac gttgacaacc
     4801 tgatcggcgc gcacaccgtc aacaccgttc ccgatgccac gctcaaagcc tttatcgacc
     4861 acggcacagc caaagccacg ctgaccgaag gcgtagaaga agcacaagcg cagcttgccg
     4921 aaaccgccgc gctcggcata gacgtagaaa ccctcgccaa ccgcttgcag gaagacggtt
     4981 tgaaacaatt tgaagaagcg tttgaaaaac tgctcgcacc gttggtttaa acttttcatc
     5041 cccgatgccg tctgaaaggc tttcagacgg catcgccctt ttgaccggac acagtgcggc
     5101 atatcaagga ttcgccctaa aaatattaat caacaagaag ttaatgcacg acattaccca
     5161 ctaacacaaa aggaaataga atcatggcaa aagcactcga aatcatttca cccaatgaaa
     5221 tttattcaga tctgattttt aaggatccgg tacctcccca tactatatat agagaattga
     5281 tgaaactggt tagtagaaat gcaagtaatg agagaatcgc agatagagcc ttcgattttt
     5341 tctcgtccgg ccttatggat ggttcagcta ccgaagagca atataatgcc ctatatgatt
     5401 taaccttgct tgaagagccc gggatggaac tgaataaaga tgagataatg gctttgatta
     5461 atagtcttaa ataaaggggc tgtaccagat atgtacacag gacgttttgc ccccagcccg
     5521 accgggctgc tccacatcgg ctcgctgctg accgccgtcg cttcctatgc cgatgcacgc
     5581 tcaaacggcg gcaaatggct ggtccgcatg gaagacctcg atccgccgcg cgaaatgccg
     5641 ggggcggcaa gccatatcct gcacacgctt gaggcattcg gattcgagtg ggacggagaa
     5701 gtcgcctatc agagccgccg ttacgccctg tatgaagaaa cactatgccg cctgaaaacc
     5761 gccggactgg tctatccctg ccattgcagc cgcaaagact ggcagaccgg ggcaaggcgg
     5821 ggcgcagacg ggttcgtcta taacggacgc tgccgcaatc cgcagcaacg ccctgcactg
     5881 caaggcaaac agccggcgtg gcgcatccgc gtccccgacc gcgacatcgg cttttcagac
     5941 ggcatcgtcg gcggttacgc ccaaaacctc gcccgcgaca tcggcgattt cgtcctgctt
     6001 cgtgcagacg gttactgggc ataccaactc gccgtcgttg ccgacgatgc cgaacagggc
     6061 gttacccaca tcgtccgcgg acaagacctg cttgtttcta cgccgcgcca aatctatttg
     6121 cagcagtgtt tggacgttcc gacaccgcaa tatgcccacc tgccgctgct gaccaacgca
     6181 caagggcaga aatggtcgaa acagacgctc gcacccgcat tggatttaaa ccgccgcgaa
     6241 caactcctcc gccaagtgtt ccgttacctc aacctgcccg aagcaccgga agccgaccgc
     6301 cctgccgaac tgctcgactg ggcggtggca cactgggata tgggcaaagt gccgaaacac
     6361 gccattaccg ccccctaaac accgcccgac aaacgcacaa atgccgtctg aaaccttcag
     6421 acggcatttc atacacacag ccccgcccta ttcgcgcata tttgcccgtt cgacttcttt
     6481 ccacgcttcg agaatcaggc cgccgtcgtt gtctttcaag agcgttgcat cggaaagcat
     6541 acgccgccaa gtgcgggcat ttttcagacc gtgcatcagc ccgaggctgt ggcggacgat
     6601 gtggcgcaag attgtgccgc gtccggcttg gatttgggct tgactgtatg tgtagagacg
     6661 ctgcaccaaa tcggcgtatt caatcgggct gcgggtatcg ccgtaaaaca gcctgtccca
     6721 ttcgcgcatc accatcgggt tgtggtacgc ctcgcgcccg accatcacgc cgtcaacgtg
     6781 ttgcaggtgt tgcgcgattt cctcattggt cgtgatgccg ccgttgatga tgatttccag
     6841 cccgggaaac tcttgcttga ggcggtaaac ataatcgtat ttcaagggcg gaacgtcgcg
     6901 gttttctttg ggtgaaagac cgtccagcca cgcgttacgt gcgtggacga taaaggtttt
     6961 gcaggcggtt ttgtcgcgca gcgtgccgac gaaatcggca acggtttggt attcggtctg
     7021 cctgtccaca ccgatgcggt gtttgacggt aacgggaatc ttgaccgcat cctgcatggc
     7081 gttgaggcag tcggcaacca gcccgacttc gttcatcaga cacgcgccga acgcgccttt
     7141 ctggacgcgc ggactggggc agccgcagtt gaggttgacc tcgttgtagc cgtattcttc
     7201 ggcggctttg gcggctttcg ccaaatcgga cgggtcgctg ccgcccagtt gcagggcgac
     7261 gggctgctcg ccttcgttaa acatcaaaaa gcggtctttg tcgccgtaaa caatcgcgcc
     7321 ggcgttgacc atttcgctgt acagccaagt attgcgggta atctggcgcg ccatataacg
     7381 gtagtgcctg tccgtccagt ccaacatcgg ggcgacggac aggcggcggg gaggaagggt
     7441 ttgcgtgttg tcgttcattg tcgatatttc accattgcgg attcaatttc aatccggaac
     7501 aaccttcatt tttggggaaa tccgcgtcat gaaagagtcc agcagtatgg ttaccggccc
     7561 gtcgttgcag agcgacacct gcatatgcgt gcggaaacgc cctgtttcga catgaattcc
     7621 gtgtccgcgc aacagttccg ccgttcgcag gtaaagctgc tgcgcctgtt ctgcaggtgc
     7681 ggcttgcgaa aacgaaggcc gccgcccgct tgtcgcgtcg gcataaagcg taaactgcga
     7741 caccagcagc accgcgccgc cgacatcttt caaagacagg ttcagcttgc ccgcttcgtc
     7801 ttcaaacacg cgcaaatggg cgattttgtc ggcgatatag cgcgcatctt tttctgtgtc
     7861 actatgcgtt acgccgagca gcacgacgaa tccgccgtcg attttgccac aggtttccgt
     7921 gccgttttcg gacacgacat ccacctttgc acctaccgtt ttctgtatga ccgcacgcat
     7981 aagccgtcct ccttacctga acgtgcaatg ccgtctgaaa aggcttcaga cggcatcggt
     8041 attggaaatg ccattacggt ttgacaccgt tttcttccaa aatggcatcg attttcaagc
     8101 gggctttttc ctgtctcaaa ccttgttcca actggtttct gaccaactcg aaaggctgcg
     8161 cgtcggggtt tttcccgacc tcgctgagtt tgaacagata atagcgttcg cccaatttga
     8221 ccggatcgcg ggtaacgtcg ccccgattca tcgcggcaaa ctgcgaagcc agcggctcgg
     8281 gaagctgctg cgccataatg aaaccgtcaa aagcctgctc gtcgttcgga taacgcttca
     8341 tcagcccttc aaaagacagc cctttgagca ggagctgctg cgcctgacgc gcctcctctt
     8401 cggttgcgaa gctgacctgc tgcaatttga tcatgcggat ttgccgctca taaaactgac
     8461 gcagtgcgct ttcggaaacc gtttccgaac gttccagaaa acggacgtac tcctcggcat
     8521 aaaaagacgc ttcggcgatt ttaaagcggt tttggacatc cttatcctta tccaaacctt
     8581 ccttcaatgc cctgtttttc aaaacttcca aagtttgcag ccgacggacg gcatcgtttc
     8641 ggattgcctg cccgtccggt ttttgggact gctccgcatg ccggtctgcc tgctgcatga
     8701 tctgcgccac cagcgtatcc accaaagccg ggtcgatttc gggtgctttg gctgccgcaa
     8761 aacctgccaa cattgcagca ataactgcgg cagcggtttt tttctgtttc atggtattcc
     8821 ctgtcctgcg cggcggcaaa acgcctgtct gaacgtcttg ccgccatatc ccgttttcag
     8881 aattattttg caggtttgat gtttgccttg cccaacagtg caccgacggc acggtcaatc
     8941 cgttccgcct gaaggttgcc ggcaatctgt cctttcattt catcaaaaga aggcactttt
     9001 acctcgcggc tgtcgttgac ataataaacg ccgtagaaat cgccgttttt cagcggcgtt
     9061 gccgtaaatt cgcctttttt caagtcctta attgcctgat aaagcggcgg aacaccctgt
     9121 tccaaatctt tcagcggcac atatccgacc ggcgcaccgg tctgtttggt acggtcgttg
     9181 agggaatatt gtttcaagac ggcatcgaaa ccttttttcg ccttcaagtc ggcaaccgct
     9241 ttttttgcat tttcttcctt gtcggtcagg atttcgccca actggacttc ctgcgtacct
     9301 ttgtaaaaac cgctgatatt gtcatatgcg gcttttattt cctgctcgga aaccggttgg
     9361 gttttggcga tatgcagcgc gtatgcctcg ccgttcaagc catattttac cgcctgccaa
     9421 acggttttga aggacggttt cttgtcgtcg cccgactttt tcgcttcggc acgcaatttg
     9481 gcaagcgcat ttttaaactc tgccgaccgg tcgagtttca ggcgtttcac ttcctgtgcg
     9541 accacggtgt tgaccacttc gttttccagc agggattggc gcagttgcgg cgtgtcttcg
     9601 gcacggctgt tttccgcacg gaatgcggca acctgcgcat cgatgacgga actgtcgatt
     9661 ttctgaccgt tgacggttgc cagcgtttgg gcaaacaggc tgccggaaca ggcaagcagt
     9721 gcaacggaag tcaggatttt tgctttcata atcttctctc tttaaatttt aaattgaaat
     9781 gttcgggcag acttcattca gtccgccgta tggaaatact cgtcaggggt agccgcccgg
     9841 atgccgagcg cgtgaatcat gccgcctgaa aacaaatctt tgagcagcga tttgaccgtt
     9901 ttctggcggt tcaggcggct tacgccttca aaacggccgc taacgaccaa aacggcataa
     9961 tgtccgccgc cggtattgcc cgcgtgtcct ttgtgcagat ggctctcatc gccgatttcc
    10021 aacaccagcg gatcgagcgt ctgcaggcgt tcgcggatca aatcgacggc cggcattatt
    10081 tgaacaccgc tttaaacggc ttgatcagca cttcgctgta cacgcctgca tgaacatagg
    10141 gatcgtcttc cgcccacgcc tctgccgcat ccaaagactc gaactgcgcc acaatcaaac
    10201 tgcccgaaac gcggttggag tcctccggca aaggattcgg gcctgccgtc aacagccggc
    10261 cttccgactt cagcgtctcc agccgtttga ggtgttcggg acgtgccgcc atacgcgctt
    10321 catacacatt ctccccgtct gttgccagca acataaaata ttccacagtc aatcctcctt
    10381 tttcagacag gtactcagat aaataccctg aataataaag aaaacaagca tcagtgcagt
    10441 cgagccgaac attttatagt tgacccattg cgactcgaac cgggtaaaca caaaccagtt
    10501 ggcgataccc ataaaaatca ggaaaccgac ccacatatac gtcaatttcg cccatacggc
    10561 atccggaagc tgaatctccc tgccgatact cgccttcaag ccgtttttac cggcgaggtg
    10621 gctgccccac aggaacagcg cgcccagcca aaacaaaacg ctcggcttcc acataatgaa
    10681 gcggctgtcg cccaaaacaa tggttgcgcc gccgaatacg acaatcagca ccagtccgac
    10741 ccactgcatc gtatccagct ttttatattt ccaatacaga aaagccgcct gaaccacacc
    10801 ggcaaccaag gcaaccgccg ttgcggtaat catgtttttg gtaacggtat aagtggcgaa
    10861 aaacaggatg acggaaaaaa ggtcgctgac aaatttcata tccaaatgag aaagcaaatc
    10921 aaataaacgc taatcataca ggcagaaccc tgtttttgca cctgcaaaac cgacaaattt
    10981 tatttcggac gatgcaaata tgcacagatg tttttgaaaa aagatgaaga tatgacataa
    11041 tttgtaaaat tggctttaaa atacagcttc ggccgggacc tctgcctatc cgcaccctat
    11101 cgtccgtatt gccgatgcct gatgacgaaa tttacagact gtacgcggtc aaaccgtatt
    11161 cagccgccaa cccacagggg atacatcttg aaaaacaaca gacaaatcaa actgattgcc
    11221 gcctccgtcg cacttgccgc atcctttcag gcacatgcgg gactgggcgg actgaatatc
    11281 cggtccaacc ttgacgaacc cttttccggc agcattaccg taaccggcga agaagccaaa
    11341 gccctgctag gcggcggcag cgttaccgtt tccgaaaaag gcctgaccgc caaagtccac
    11401 aagttgggcg acaaagccgt cattgccgtt tcttccgcac aggcagtccg cgatcccgtc
    11461 ctggtgttcc gcatcggtgc aggcgcgcag gtacgcgaat acaccgccat cctcgatcct
    11521 gtcggctact cgcccaaaac caaatctgca ctttcagacg gcaagacaca ccgcaaaacc
    11581 gctccgacag cagagtccca agaaaatcaa aacgccaaag ccctccgcaa aaccgataaa
    11641 aaagacagcg cgaacgcagc cgtcaaaccg gcgcataacg gcaaaaccca taccgtccgc
    11701 aaaggcgaaa cgcttaaaca gattgccgcc gccatccgtc cgaaacacct gacgctcgaa
    11761 caggttgccg atgcgctgct gaaggcaaac ccaaatgttt ccgcacacgg cagactgcgt
    11821 gcgggcagcg tgcttcacat tccgaatctg aacaggatca aagcggaaca acccaaaccg
    11881 caaacggcga aacccaaagc cgaaaccgca tccatgccgt ccgaaccgtc caaacaggca
    11941 acggtagaga aaccggttga aaaacctgaa gcaaaagttg ccgcgcccga agcaaaagcg
    12001 gaaaaaccgg ccgttcgacc cgaacctgta cccgctgcaa atactgccgc atcggaaacc
    12061 gctgccgaat ccgcccccca agaagccgcc gcttctgcca tcgacacgcc gaccgacgaa
    12121 accggtaacg ccgtttccga acctgtcgaa caggtttctg ccgaagaaga aaccgaaagc
    12181 ggactgtttg acggtctgtt cggcggttcg tacaccttgc tgcttgccgg cggaggcgcg
    12241 gcattaatcg ccctgctgct gcttttgcgc cttgcccaat ccaaacgcgc gcgccgtacc
    12301 gaagaatccg tccctgagga agagcctgac cttgacgacg cggcagacga cggcatagaa
    12361 atcacctttg ccgaagtcga aactccggca acgcccgaac ccgctccgaa aaacgatgta
    12421 aacgacacac ttgccttaga tggggaatct gaagaagagt tatcggcaaa acaaacgttc
    12481 gatgtcgaaa ccgatacgcc ttccaaccgc atcgacttgg atttcgacag cctggcagcc
    12541 gcgcaaaacg gcattttatc cggcgcactt acgcaggatg aagaaaccca aaaacgcgcg
    12601 gatgccgatt ggaacgccat cgaatccaca gacagcgtgt acgagcccga gaccttcaac
    12661 ccgtacaacc ctgtcgaaat cgtcatcgac acgcccgaac cggaatctgt cgcccaaact
    12721 gccgaaaaca aaccggaaac cgtcgatacc gatttctccg acaacctgcc ctcaaacaac
    12781 catatcggca cagaagaaac agcttccgca aaacctgcct caccctccgg actggcaggc
    12841 ttcctgaagg cttcctcgcc cgaaaccatc ttggaaaaaa cagttgccga agtccaaaca
    12901 ccggaagagt tgcacgattt cctgaaagtg tacgaaaccg atgccgcaga cgatttgtcc
    12961 gcattgcttc aacctgccga agcactgtcc gttgaggaaa atataacgga aaccgttgcc
    13021 gaaacacccg acttcaacgc caccgcagac gatttgtccg cattacttca accttctgaa
    13081 gtacctgccg ttgaggaaaa tgcagcggaa accgttgccg atgatttgtc cgcactgttg
    13141 caacctgctg aagcaccggc cgttgaggaa aatgtaacgg aaaccgttgc cgaaacaccc
    13201 gatttcaacg ccaccgcaga cgatttgtcc gcattacttc aacctgctga agtacctgcc
    13261 gttgaggaaa atgcagcgga aatcactttg gaaacgcctg attccaacac ctctgaggca
    13321 gacgctttgc ccgacttcct gaaagacggc gaggaggaaa cggtagattg gagcatctac
    13381 ctctcggaag aaaatatccc aaataatgca gataccagtt tcccttcgga atctgtaggt
    13441 tctgacgcgc cttccgaagc gaaatacgac cttgccgaaa tgtatctcga aatcggcgac
    13501 cgcgatgccg ctgccgagac agtgcagaaa ttgctggaag aagcggaagg cgacgtactc
    13561 aaacgtgccc aagcattggc gcaggaattg ggtatttgat tcccaactgc cctttcgcag
    13621 atcaaggatg ccgtttcaga cggcatcttt ttttgcctta tcggtgtaac ggataaagtt
    13681 tgaaccggca caggctcaaa cagcaggtcg acggcaacaa aatgccgtct gaaaccccta
    13741 aaggcttcag acggcattgg cggcggcggt atcaggcagt ttgataggca accgaatcgt
    13801 caccgctttt cttttgaatg aattcgattt tgtatccgtc ggggtcttcg acgaaggcta
    13861 tcacggttgt gccgtgtttc atcgggccgg cttcgcggac gacgtttccg ccctgccgct
    13921 tcacacgttc gcaggcttcg taggcatcat ccacttcaac cgcgatgtgt ccgtaggcgt
    13981 tgcccaagtc gtatcgttcc gtatcccagt tgtgcgtcag ttccaaaacc gtgctgtcgg
    14041 tttcatcgcc gtaaccgacg aaggcaaggg taaatctgcc ttcgggataa tcttttcggc
    14101 ggagcagttt catacccaaa acgttttggt agaaatcgag ggatttttcg agattaccca
    14161 cgcggagcat agtatggagt aagcgcattt tttgtgttcc tttcggtggt ggttaaactt
    14221 cgattttatt cggggtaaac gtctgccatt tgttgcaggc ggggcagtgc cagaaaaaga
    14281 cttgggattt gaagtggcag ttgcggcaac ggtacatcac gctgcgctgt agctgccgtc
    14341 cgataaccga acgcatcatg tcggcatcgg ctttccaagc cggatccaaa tcgctgagtt
    14401 tcaaaccaag caggcggtac acgccgttga ggtcgggctt gcggcggaca agctcgacgg
    14461 cggtttgcgc ggcttctttc tcgcacttaa gcagcaggga tttctcgtac acgacattga
    14521 tcaggtcaag ttcgggaaac gtctgcatat atcctgtcag acggttcaag ccttcttcag
    14581 gttttccctg cgcggcatag gcttcgtaaa gcttctcgcc gaccatgctc aagtatgcat
    14641 ggttttgctg ctcgatggcg gcataggctt cgacggcggc agggaaattg ccttgtcggt
    14701 gttcgatgtc gcccaaaatc atgttggcac gggtgcattt tttgttggct tcgagtgcct
    14761 tgccgacatt gaaacgcgcg acatcgaaat tggacttgaa cagcgcggct tgggcaagtt
    14821 cgcaataaaa ctgggcgatt tcaaactgat aggtctgatc gtcatggctg agcagccggg
    14881 cggtttcaac cgctttttcc caatccctgt cctgttggta gatattgagc aggtgctgtc
    14941 tggcttcacg cgccatttta ccgtcttgca gccccaaaaa aatctgttcg gcacgatcga
    15001 ccaaccccgc actttggtag ttttgcgcca attcaaacag gacgcgcgcg cgcttttcgc
    15061 cgaccgtatc gggagaatcg agcattgtcc ggtgtatgtt gatggctttg tcgttttcgc
    15121 cacgctgacg gtaaagcttg cctagggtga ggtttaggtc gtatgactga ggctgctgat
    15181 caatgacctc tgccaattcc ctggcggcac gtccgctgtt gcggtcaacc aaggcatcca
    15241 gacttttata aaatcccgac ggtatgcttt ttgcctgctt taatacagtc ttcatatcca
    15301 cacgggcggc aaaccagccc atcgcgaaga aaacgggcaa aaggataatc ggcagcagga
    15361 taatccacaa ttcattgtcc atatcggctt tctcaaggct gtttggcaga ttcgggcgca
    15421 ttttgcgccg gtggtgcggt cagctctttc cccgtcaaac gcgcattttt ctttacttcg
    15481 gcacgcaacc tgccgttctc gccacgtaac gacaacaacc gtccgaacaa ggcaaacatt
    15541 ccgaacacga tgccgacgac aaacgcgccg aacaatacga caatcagcgg caaatcgact
    15601 ttctgtccgg gcaggtagga gaaggtaacg gcatccgtat taatgacggc aagcagcagg
    15661 aagagcagca ggataatgat tttgatgacg gtatagataa gtttcatgtt tgctccgtaa
    15721 ataaaaacgc cgcccggaca gcttcgcact ctgaaccaag attgcgctag tttaaacgat
    15781 ttgcacggtt tcggatagga tgcggcagcg tgttcggacg acatacggag tatgcgattg
    15841 ccgacaattt taccaaatac accgttcctt tccatttgaa aaataacgga ttggacaccg
    15901 catcgacaga aaaacccgcc gcgcacttgt caaaaccctg tttgcaggcg tatctttaca
    15961 atcttcaaat tcaaaccgtt cattgaaaca tatcagaata agaaaggctt tacatcatga
    16021 gcagacccgt acccgccgta ttcggcagcg tttttcacag tcaaatgccc gtcctcgcct
    16081 accgcgaagg caaatggcag ccgaccgaat ggcaatcttc ccaagacctc tccctcgcac
    16141 cgggtgcgca cgccctgcac tacagcagcg aatgtttcga gggactgaaa gccttccgtc
    16201 aggcagacgg caaaatcgta ctgttccgtc cgactgccaa catcgcgcgt atgcggcaaa
    16261 gtgcggacat tttgcacctg ccgcgccccg aaacccaagc ctatctcgac gcgctaatcg
    16321 aattggtcaa acgcgccgcc gatgaaattc ccgatgcgcc tgccgccctg tacctgcgtc
    16381 cgaccttaat cggtaccgat cccgtcatcg gcaaggccgg ttctccttcc gaaaccgccc
    16441 tgctgtatat tttggcttcc cccgtcggcg actatttcaa agtcggctcg cccgtcaaaa
    16501 ttttagtgga aaccgaacac atccgctgcg ccccgcatat gggccgcgtc aaatgcggcg
    16561 gcaactacgc ttccgccatg cactgggtgc tgaaggcgaa agccgaatac ggcgcaaacc
    16621 aagtcctctt ctgcccgaac ggcgacgtgc aggaaaccgg cgcgtccaac tttatcctga
    16681 ttaacggcga tgaaatcatt accaaaccgc tgaccgacga atttttgcac ggcgtaaccc
    16741 gcgattccgt actgacggtt gccaaagatt tgggctatac cgtcagcgaa cgcaatttca
    16801 cggttgacga actcaaagct gcggtggaaa acggtgcgga ggcgattctg accggtacgg
    16861 cagccgtcat ctcgcccgtt acttccttcg tcatcggcgg caaagaaatc gaagtgaaaa
    16921 gccaagaacg cggctatgcc atccgtaagg cgattaccga catccagtat ggtttggcgg
    16981 aagacaaata cggctggctg gttgaagtgt gctgatgctt taaataaaaa aatgccgtct
    17041 gaaacccgtt tggcgtttca gacggcattt tcgcgttcgg accatttccg ctgcacctgc
    17101 agcaagtcgg gcatttccct agaaatacgc ttcagacggc aaaccgccgc ccgaaaccga
    17161 tacgcggtac ggacggcgca cggatttgaa aacggcggat tatccctcgg tgctcaaggc
    17221 attaatgctg taaccgccgt caacgtaagt gatttcgccg gtaatgccgg acgacaggtc
    17281 ggacagcagg aaggcggcgg tattgccgac ttcttcaatg gtaacgttgc ggcgcagcgg
    17341 attgtgggcg gcgacgtgtc ccaaaagttt gccgaaatcg gcgataccgg aggcggcaag
    17401 cgttttaatc gggccggcgg aaatgccgtt gcagcggatg ccttctttgc ccagacaggc
    17461 ggcggtaaaa cggatgcccg cctcaaggct ggcttttgcc atacccatca cgttgtaatt
    17521 tggaatcgcg cgcaccgcgc ccaagtagct cagggcaacg atggcggagt ttctgccgcg
    17581 catcatcgga cgggcggctt ttgccaatgc gggcaggctg tatgcggaaa tttcgtgtgc
    17641 ggtgttgaac gcttcgcggc tgatgctgtc gaggaagtcg ccgctcaagg cttctttcgg
    17701 cgcgaagccg atggaatgca ccaaaccgtc caagccgtcc caatgtttgc ccaagtcggc
    17761 gaacacttgg ttgatttcgt cgtcgctggc gacatcgcag cggaatacga gttcggaacc
    17821 caattccgcc gccattttgc ggacgcgctc ttccagtttg tccacaacgt aggtaaacgc
    17881 cagttccgcg ccttgttcgc ggcaggcttt ggcgatgcca taagcgatgg aacgctcgga
    17941 aatcatgccg gtaatcagaa tttttttgcc ttgcagaaaa cccattttgt atccttcaaa
    18001 tagtgttcgg ttcattctaa accgttgatt atagcaaatt gtccctgttt ctgtgttttc
    18061 acgttgcagc atgcaaacgg caatgccgtc cgaagcggat ttcagacggc atcggacgtt
    18121 tcaaatacgg tttaaggcat cagatgccgc gcaacaattc gttcacgctg gttttcgcac
    18181 gggtttgcgc gtccacgcgt ttgacgatga cggcgcagta aaggctgtgg ctgccgtctt
    18241 tggaaggcat actgccggac acgacgaccg aaccggccgg tacgcggcct tggtagattt
    18301 cgccggtggt gcggtcgaag attttggtgg attgaccgat gaacacgccc atagaaatca
    18361 cgctgccttc ttcgacaatc acgccctcaa cgatttcgga acgcgcaccg atgaagcaat
    18421 tgtcttcaat aatggttggg ctggcttgca ggggttcgag tacgccgccg atgccgacac
    18481 cgccgctcaa gtggacgttt ttgccgattt gcgcgcaaga gccgacggtc gcccaagtat
    18541 cgaccatcgc accttcgtca acgtatgcgc cgatgttgac gtaagacggc atcagcacga
    18601 catttttcgc cacaaagctg ccgcgtcggg caaccgcacc cggaacggcg cggaagcctg
    18661 cgtttttgaa ctcgtcttca gaccagtcgg caaacttggt cggcactttg tcgaagtatt
    18721 tgttcacacc gtcgttgagg atttcgttgt cttggatgcg gaaggacagc aacacggctt
    18781 ttttcgccca ttcgttaact ttccattcgc ccacgcccaa gcgttcggcg acgcgcagtt
    18841 tgccggaatc gagttggcgg atggtttcca acacggcttc tttaacttcg ggagtaacgg
    18901 tggtcggatt aatgtccgcg cggttttcaa aggcggtttc gataatgttt tgcaaagaca
    18961 taatgtttcc ttatgtgaga tgtttcgtgg gacgcttgcc ggtattttca agcagtatgt
    19021 tcatttgaaa tgaatgcgct attgtgccac gcaaacgcat attcgtcagc aatacgcggg
    19081 cggttgccga acattggcgt ttcggaatcg ggcgggcggc agtaccttta tgccgcaccg
    19141 ccgcctttca gacggcattc gcggtaaaac gccatcagcc cttcggtcga ggcatcgtgt
    19201 acggacgtgc cgccttccag ttcgccgatg atggtttttg ccaactgttt gccgtattcc
    19261 accccccact gatcgaaggg gttgacgttc catatcgcgc cttggacgaa ggttttgtgt
    19321 tcgtaagccg ccatcagcat acccaaattg tagggcgtga ggcggtcgag caggatgctg
    19381 ttgctggggc ggttgccagg gaactctttg tgcggcgcga ggcgttcgcg ttccgcttcg
    19441 ggcaaatctg ccagttcggc gcgtgcttcg tccaaggttt tgcccttcat cagggcttcc
    19501 gcttgggcaa aggcgttggc aacggtaaaa cggctgcgtc cgtcctccac gccctgcgcc
    19561 gtcatcggga cgataaagtc gcagggaatc aggcgcgtgc cttgatggag cagttggaaa
    19621 taggcgtgct ggcagttgac cccttcaccg ccgaacacga tgccgcccgt tttgcacacg
    19681 gcgggactgc cgtctgaagc gcggcttttg cccaaactct ccatatcgag ctggttcagc
    19741 cacaccggca gcaggcgcag gttgtggctg tacggaacgg cggtctgccc gtccgcgtgt
    19801 tggaaattgt tataccacac ggcaatcagt gccatcagaa cgggaatgtt gcggcgcggc
    19861 ggcgtgtgga aaaaatggct gtccatcgcg tgcgcccccg ccaacaactc gcggaaacgc
    19921 gccccgccga ccgcaaccat cacgggcaaa ccgacgggcg accagacgga atagcgtccg
    19981 cccacccagt cgtacatcgc aaacacgcgt tccgccgcga taccaaaagc cgcagctgcc
    20041 gcagtgtcgg cagacaccgc gcaaaaatgg cacgccgttt cggattccga gaaccccgca
    20101 ccgcgatacc acgccttgac tgcctgtgca ttgagcaggg tttccggtgt tttgaaggac
    20161 ttgctggcaa cgcaaaacac tgtcgtttcg gggttcagac ggcataaaac cgcatccagg
    20221 caggcaggat cggcgttggc ggcaaaatgg acggtgatat gccgtctgaa cggctcaagt
    20281 gcctgcacgc acattgccgg cccgaggtcg gatccgccta tgccgatgtg gacaaaatcc
    20341 gtaatccgtt ttccggttgt cccctgatac gaaccgtcgt ccaaactgtg tgcaaactcc
    20401 aacgcacgat ttaactcgcg gcggatttcg ggcaacacgt ccctgccgtc cgcataaacg
    20461 gcatccgcac cgtcgggtag gcgcaaagcc gtatgcagcg cggcacgccc ctcgctgccg
    20521 ttgactttcg cacccgtccg caaagcacgc attttccctt ccaaatccgc cgtctccgca
    20581 agacggcaga gcagttgcag cgtatcttcg cccaaacggt ttttgctgta atcgaacaac
    20641 atcccgtcca aacgctcatg catacgctca aaacggtcgg gttcgcaggc aaagcggtcg
    20701 cgcaaaagga catgacgcgt atcctgataa tggcgttcga gcgcatacca tgcacgggta
    20761 aaagcattca tctgttttcc ttgatttttc agaaccggat taaaatgtag cagaatgtag
    20821 tttaacaaac ggcagcggct ttggcgaatc tccggaacac cgcccgccgc gtccaatagc
    20881 accttatttc catatggcga aaatatagtg aattaacaaa aatcaggaca aggcggcgag
    20941 ccgcaaacag tacaaatagt acggaaccga ttcacttggt gcttcagcac cttagagaat
    21001 cgttctctct tgagctaagg cgagccaacg ctgtaccggt ttttgttaat tcactatacc
    21061 ctccggccgg catttgaccc gcaacaatat cctgcaagat ttattgtgta cgcataaatg
    21121 ccggacagcc gcctaaataa ggtataatcg catccgattc tgtcccgttt gccgcccgca
    21181 ggcgggatgt cggcggtttt catcttaccg ggaacacgcc ggtactgttt tttaacgatg
    21241 tttcttacat tttattccaa ttactttacg gggctagaat atggctaaaa acggaggatt
    21301 ttctttgttc gcaaagaaag aaaaacgctt tatctttgaa ggcaggcatt ccgcctccga
    21361 caaactggtc aacggcgaag tatccgcgtt taccgaagaa gaggcgcgca aaaaactggc
    21421 aaaacgcggc atccgcccgt tgcagattac ccgtgtgaaa acaagctcca agcgcaaaat
    21481 cacacaagaa gacatcaccg ttttcacccg ccagctgtcc acgatgatta aagcgggcct
    21541 gccgctgatg caggcatttg aaatcgtggc gcgcggacac ggcaacccgt ctatgacgga
    21601 aatgctgatg gaaatccgag gcgaagtgga acagggcagc tcgttgagcc gcgcattctc
    21661 aaaccaccca aaatatttcg accgcttcta ctgcaatctg gttgcggcgg gcgaaacggg
    21721 cggcgtattg gaaagcctgc tggacaaatt ggcaatttac aaagaaaaaa cccaggccat
    21781 ccgcaaaaag gtaaaaaccg cactgaccta tccggtatcc gtcatcgccg tcgccatcgg
    21841 tttggtattc gtgatgatga ttttcgtact gcccgccttt aaagaagttt acgccaatat
    21901 gggcgcggag cttcccgcac tgacccaaac agtgatggat atgtccgact ttttcgtctc
    21961 atacggctgg atggtgctga tcgcactggg ctttgccata tacggcttcc ttaaattgaa
    22021 ggcgcgttcg attaaaatcc aacggcgtat ggatgccata ctgctgcgta tgccgatttt
    22081 cggagacatt gtccgcaaag ggacgattgc ccgctggggc aggacgacgg cgacgctgat
    22141 tgcggcaggc gtgcctttgg tcgatgtatt ggactccact gccggcgcgg cgggcaattt
    22201 aatctatgaa gaagccaccc gggaaatccg tacgcgcgtc atccaaggtt tgtctatgac
    22261 ttcggggatg cgtgcgacgg aactgttccc caatatgatg ttgcagatgt cttccatcgg
    22321 cgaggaatcg ggttctttgg acgatatgct caacaaagcc gccgaatttt acgaagacga
    22381 ggtggacaat gcggtcggca ggctgtccgc tatgatggag ccgatcatta tcgtgatttt
    22441 aggcttggtc atcggcacgc ttctggtcgc catgtatctg ccgctgttta atttgggcaa
    22501 cgtggtcgcc tgatttgccg cacagatccg gcgcggattc gctctgcgcc ggtttgtttt
    22561 tgttttgaat acattgagaa caaaatatgt ctgatttgtc tgtattgtcg ccgtttgccg
    22621 tgcctttggc agcggtgttc gggctgctgg tcggcagttt cttaaacgtc gtcatttacc
    22681 gcgtgccggt catgatggaa cgcggctgga cggtatttgc caaagaatat ttaaacctgc
    22741 cgctgaccga agaggaaagc cgtaccttca acctgatgaa accggattcc tgctgtccca
    22801 aatgccgcgt gccgatacgc gcgtggcaga acatcccgat tgtcagttac ctgctcctgc
    22861 gcggcaaatg cgcctcctgt caaaccaaaa tcagcatacg ttatccctta atcgagctgc
    22921 tgaccggcgt attgttcggg ctggtcgcct ggcaatacgg ctggtcttgg attacgctgg
    22981 gcggattggt actgaccgcg tttctgattt ccctgacctt tatcgatgcg gacacccaat
    23041 acctgcccga ctcgatgaca ctgcccttga tttggctggg gctgatattt aatttggacg
    23101 gcggcttcgt gcctttgcag tctgccgttt taggtgcggt tgccggctat ggttcgatat
    23161 ggcttttatg cgcggtatat aaactgatta aaggcgaaat cggtatgggc aacggagatt
    23221 tcaaactgat tgccgcattg ggcgcgtggc tcggcatatc cgcattgccc gtgctgattt
    23281 ttgtttcctc gctgatcggt ttggtcgcgg caatcgttat gcgcgtcgcc aaggggcagc
    23341 attttgcctt cggccccgca ctgacagttt cgggctggat aatttttacg gcaaacgatt
    23401 ccgtatggcg ggcggtcaac tggtggctga cccatccggt gctgtaagat gacggtatgg
    23461 gtcggactga ccggcggaat cggcagcggc aaatcggcag ccgcgcaatg ttttgccgat
    23521 ttgggcgtgc cgcgcatcga tgcggacgcg gcggcgcact cgctgacggc ttcagacggc
    23581 atcgccctgc cggaaatcag gcggctgttc ggcgacaccg tttttgacac acagggtttg
    23641 ttgcggcgcg acatattgcg taaagaagtc tttgcctccc catcgcgaaa agccttgctc
    23701 gaatccgtga tgttgccgct gattttctca gaaatcaaaa aacagcaaga aacctttacc
    23761 gatgcggttt acggcattgt cgaaattccg ctgctgacgg aaaagcgtca atttgtcagc
    23821 ctgatacggc gtgtcctgac cataagcgca cctttggaaa aacgtatcgg cagggtgatg
    23881 gcccgcagcg ggctgacgcg cggcgaggtg gcggacatca tcagccatca ggcatccgaa
    23941 tccgaacgcc tgctgcttgc agacgatgtg ctgctcaatg acggcagcct caaaagcctg
    24001 tgtgagaaaa caatgcgcct gcacgcgttt tattcaggga ttttcgcctc aaaaccaaca
    24061 caaggaaaac acaatgactg aatcgcggca aacacgcctt caagtcaaat gtccgacctg
    24121 tcaaacggca gtagtatgga aaccggaaaa cgcattccgc cccttctgtt cgcaacgctg
    24181 caaactgatc gacttgggcg gatgggcaga cgggaaatat acggtttcca gccaaacgga
    24241 aagtttgccg gaaatatccg aacccgacat ggcataccgc tgaccgcccc gccttcccgg
    24301 caaacaccct gaaagtcaaa tgccgtctga aacaaacacg cttcagacgg cattttcatt
    24361 ctcaaaccta atcgttggta tttgccgtta cctcttccaa tgaagtaatg ccctgcataa
    24421 ctttcaaaat accggcccgg cgcaaatcca ccataccctc cttataggca acgtccaaaa
    24481 tatccacttc cgtaccgttg ttcataatca cacgctgcat ttcttcgctg atgggcataa
    24541 cctcatacac gcccgcacgc cccttataac cctgcccccg gcaacggtcg caaccgacgg
    24601 cgcggtaaag tttccaatct tttgcaaggt cctcatcggt gaagccgact tccttcaaag
    24661 cagaggcaga cgggcgttcc acttcctgtt tgcagctcga acacagcctg cgtaaaagac
    24721 gctgcgccat aatcaggctg accgaactgg caatattaaa cggcgcgaca cccatattca
    24781 gcatacgcga caacgtcgcc ggcgcattat tggtgtgcag ggtggaaaac accatatgcc
    24841 ctgtttgtgc cgccttaatc gcaatatcgg cagtttccaa atcacgaatc tcaccgacca
    24901 taatgatgtc cgggtcctga cgcaggaaag acttcaaagc agcggcaaaa gtcaggccct
    24961 gcttatcatt gacgttaacc tgattgatgc ccggcaggtt aatctcggca gggtcttccg
    25021 ccgttgcaat atttaccgac tccgtattca aaatattcaa acaggtatag agcgacaccg
    25081 tcttacccga acccgtcgga ccggttacca gcaccatccc gtagggacgg tgaatcgctt
    25141 ccaacaacaa ttttttctga aacggctcaa aaccgagctg gtcgatgttc aaagacgcgg
    25201 catcggaatt caaaatccgc atcacgacct tttcgccaaa cagcgtcggc aatgtgctga
    25261 cacggaaatc gacaggcttg ccgccctttt gaaaggtcag ctgcatcctg ccgtcctgcg
    25321 gtatccgttt ttcggaaatg tccaaacgcg acattacctt aatccgggaa gcaagctgcc
    25381 cccttaccgc aatgggcggc tgaaccacct cgcggagctg cccgtccaca cggaaacgga
    25441 tacgggcatt gtgttcgtaa aactcgaaat ggatgtccga tgccccgctg cgcaaggcat
    25501 ccgacaaagt cttatggata aacctcggaa cagggccatc ttctgcctcc tcgttgtcga
    25561 tatacagggt gtggctttcc tcttcctcct gcccaagctc ctgaagcagc gatgtcgaac
    25621 gcgaacccac ccaatcgagc aaacccgcca actggtcatc ctcgacaatg accaactcaa
    25681 cctcaatccc tgcggcagaa acggttttct gaatttgcgg catctgtgtc ggatcggaaa
    25741 ccgcaaaaaa tactttgtcg ccccgacgga aaaccggcac acagtggaac tccaccatct
    25801 gctcctccgt caacaccccc atcagcaccc tgtggcgcgg ataatgacgc aaatcaagaa
    25861 tcgaataact gaacaccctc gcaatcaatg ccgcaagcga cttgggcgaa atgacaccgt
    25921 ctgaaaacag catcggcaac acttccttac ccgcctgcga ctcattgtag taatgctcgg
    25981 cctgctcaac agtaaccacc tggttttgaa ccagaatcct cagcaaacct acgctcatac
    26041 gaccttatcc ccaaatttat tcattgttat acctgtacag cttttatagt ggattaacaa
    26101 aaaccagtac ggcgttgcct cgccttagct caaagagaac gattctctaa ggtgctgaag
    26161 caccaagtga atcggttccg tactatttgt actgtctgcg gcttcgtcgc cttgtcctga
    26221 tttttgttaa tccactataa aaggatattg aaggaaaaaa acatgactac ttaccgtatc
    26281 gcacccagca ttttatcggc agattttgca cggcttggcg aagaggtgga aagcgtcatt
    26341 gcggcaggtg cagatctgat ccattttgac gtgatggaca accattatgt gccgaacctg
    26401 accttcggcc ctatggtttg cgcggcgttg aagccttatg caagcgtgcc gatcgatgtg
    26461 catctgatgg tcgaacccgt tgacgacctg attcagtcgt ttgccaaagc aggagcatca
    26521 atcatcacgt tccatcccga agcgagccgc catatcgacc gcagcttgag cctgattcgg
    26581 gacatgggct gtcaggcggg gctggtgttg aatccggcaa cgcccgtata tctgttggaa
    26641 aacgtattgg acaggctgga tatggttttg ctgatgtcgg tcaaccccgg attcggcgga
    26701 caaagcttca tcccgcacac ccttgaaaaa atccgccggg tgcgggcgat gctggatcgg
    26761 tacgaagcac aaagcgggcg gcacatcgcc atcgaagtgg acggcggcat caaaaccgac
    26821 aatattgccg ccgttgcccg agctggtgcg gatacctttg ttgccggttc tgcgattttc
    26881 ggcaaaccag actataaggc ggtgattgat gcgatgaggg cggaactgga aaaaagcggc
    26941 aggctgaacc ttgcgccaat gattgaaata gaaatgccgt ctgaaaatta gctctgtttc
    27001 agacggcatt gcgttatttt tcgacgggca gcccgaaatg caggtaggcg cgttcggtcg
    27061 ccatcctgcc gcgcggggtg cgttgcagga agccttgttg gataaggtag ggttcgataa
    27121 cgtcttcgat ggtgtctgtt gattcgccga tggcggcggc aacattgtcc aaaccgaccg
    27181 ggccgccgcc gaatttgtgc aaaacggctt cgaggaattt cctgtccatc acgtccagcc
    27241 cctgcacgtc cacgtccagc atacttaaag cggcatcggc gatgccgccg tcgattgtgc
    27301 cgttgttttt cacgtcggcg aaatcgcgca cgcggcgcaa caggcggttg gcgatgcgcg
    27361 gcgtaccgcg gctgcgtttg gcgatttctt ccgcgccttc ttcggacata tcgagttgca
    27421 ggagttgtgc cgaacggctg acgatggtgg caaggtcgcg gttttcgtaa aactcgaggc
    27481 gggagacgat gccgaagcgg tcgcgcaacg gattggtcag cataccggcg cgggtggtcg
    27541 cgccgacaag cgtgaagggc ggcaggtcga ttttaacgga acgggcggcg ggcccttcgc
    27601 ctatcataat gtcgagccgg tagtcttcaa gcgcggggta gaggatttct tcgacaacag
    27661 ggctgaggcg gtggatttcg tcgataaaca atacgtcgtg cggatcaagg ttggtcaaaa
    27721 gggcggcgag atcgccggcg cgttcgagga cggggccgct ggtttggcgc aaatttacgc
    27781 ccaattcttt ggcgatgatg tgcgccagtg tggttttacc cagtccgggc gggccgaaga
    27841 gcaaaacgtg gtcgagtgct tcgccgcgtt ttttggcggc ttggatgaaa atggcgagct
    27901 gttctttggc tttatgctgc ccgatatagt cgtccagcgt tttggggcgg agggcgcgtt
    27961 cgagcagttc ttcctgtgcg gaggcggttt gggcggcaac aatgcgttgc ggttgagcgg
    28021 cagtcaggtt gtcggtttgc agcatagtgt tccctttgtc gggtatgccg tctgaacggt
    28081 cggcggcgtt tcagacggca ttgaaaagat aacggtcaaa agcgttttac ccgcgcgttt
    28141 cgcgccaaac gagatagtcg cgcaggggcg gcataggcgg gttgatgcag tgtgggcaga
    28201 tgcctgtggt gtcttcgtcg tcgctgtcga tgtgataggc gttggggtcg aagcggactt
    28261 gctgcatcac cgcctgcgcc aacgcctgcg cctgaacaac gtcgaaattg aatttttcga
    28321 ggatttcgtt caataggcgg atttcgccac cgctaaattc cgcactgtgt ttgaggatga
    28381 ggcgttgata atcttcgttg ttgattttag gcaataaatc ggttttcagg gtcatgattt
    28441 tatgtcgggg gcggaatggc tgaagcgtga attatagcgg atatggcggc ggctgttgca
    28501 aagcttggat tgggtatcgt cctcaaaact ttatagtgga ttaacaaaaa ccagtacagc
    28561 gttgcctcgc cttgccgtac tatctgtact gtctgcggct tcgtcgcctt gtcctgattt
    28621 ttgttaatcc actataaaag tggctgcatt ggacgtttta atgtttttct gttttgtctt
    28681 gcgccgctcg aaacgctttt tgcaatgggg cgatttgtgc cagccgcgcc cggtcgattt
    28741 gttcggcgat aaggtgcgct tttccctgcg agcggcattc ggcggcgatt ttgcccgaat
    28801 ccgcctgatt ggcggcttcg agtaaggcga gccagtgcgc gcgttgcggg tagggcgtgt
    28861 gttcgcggtt cagacggcct tgcgtgtcgg caatgcagac gttcaatgcc gtctgaaagc
    28921 gttcggggcg tctgaaagcg tcggtttttt tcaaaacgtt cagaatggtt tggcttttaa
    28981 gctgtccgac ttggtggaaa ataatgtgcc aacggcagac aagttcggca agctcggcgc
    29041 aatgtttcgg cgcacgcagc cgctgattga cttcgcgcac gggttcgaca ccggcgaggt
    29101 cgtgtccgtg gtggcgcggc aggatgtcgg acggtgtttt ggctttgccc aagtcgtgca
    29161 gcagggcggc atagcgttcg ggcaggctca aacccatatc ggcggcgcgt tgcagcgtca
    29221 tcagggtatg gatgccgctg tcgatttcgg gatggtagtc ggcgcgttgc ggcacgccga
    29281 agagggcatt gacttcgggc agcaagactt tgagcgcgcc gcattcgcgc aacacttcaa
    29341 tcattttgcg cggatttttt tccatcaaac ctttcgcaaa ctcctgccag acgcgttcgg
    29401 caaccaatgc gtccgcttcg ccgttttcca ccatctgccg catcagcttt atggtttctt
    29461 cggcgatttc aaacttgtaa cgcgcggcaa agcgggcagt acgcaggatg cggacggggt
    29521 cttcggcgaa ggccggggaa acgtggcgca aaatgcctgc cgccaaatcc cgttgtccgc
    29581 cgaaagggtc gataatcttg ccgtccgcat cttgcgccat cgcgttgatg gtcaggtcgc
    29641 ggcgcatcaa atcctgctcc agcgtaacgt ctttgtcggt gtggaaactg aagccggcgt
    29701 aacctttggc ggttttgcgc tcggtgcggg cgagggcgta ttcttcgtgt gtttcgggat
    29761 ggagaaacac gggaaagtct ttgccgactg gctggaagcc ttgcgccagc atggtttgtg
    29821 cgtctgcgcc gacgaccacc caatcgcggt ctttgacggg caagcccaaa agataatcgc
    29881 ggacggcgcc gccgacgagg taagtctgca tatgcttcct attttaaagt tatcaacaat
    29941 gccgtctgaa gcggcttcag acggcattgt ttcaaccgga gggtattttg tgcgcttatg
    30001 ctacgccttt tttctccaag taactttcgt aatcgcccaa gtagtgttca tatccgcctt
    30061 taccgtccaa ttcgatgatt tgggtagcca atgaagatac aaactgacgg tcatgcgaga
    30121 cgaaaatcag cgtgccgttg tatttttcca gcgccatgtt caaggattcg atgctttcca
    30181 tgtccatgtg gttggtcggt tcatccatga ctaagacatt gggtttcaac agcaacagtt
    30241 tgccgtaaag catacggcct ttttcaccac cggagagaac cttcactttt ttcacgacat
    30301 cgttactgcc gaagagcaaa cgccccaaag tgccgcggat gacttgttcg tcgtcgcctt
    30361 cctgccccca ttggcgcatc cattcgctca aatccatatc gacgtcgaag tcgttttcat
    30421 ggtcttgcgg atagtagccg acactggctt tttccgccca tttgatgctg ccttcgtccg
    30481 gtaacaggcc gtctgaatat tcggggttgt acgcgccggc caagagtttc agcagggtgg
    30541 atttgcccgc gccgttcggg ccgatgatgg cgaggcgttg tcccgcttca aggatgaagt
    30601 tcaggttttt aaacaactgg gtttcaaagc gtttcgccag tttttcaact tccacagcct
    30661 gacggtgcag cttggctttt tcatcggctt caaaacggat atacgggttt tgacgggtgg
    30721 aaggtttgac ttcgaccatc tccgatttga ttttgtcggc ctgtttcaga cggctggttg
    30781 cctgacgggc tttggatttg ttggcagaga agcgtgcgac gaactcttgc agctcttgca
    30841 gtttctcttt ggctttggcg ttgtctttca gggcgcgctc acgcgattgg gcggaagcga
    30901 gcatgtagtc gtcgtagttg ccaggataga tggtgatggt gttgtagtcc aaatccgcca
    30961 tgtgggtgca gacttcgttc aaaaagtggc ggtcgtgcga gatgatgatc atggtggagt
    31021 cgtattggtt caacacgcct tccagccagc ggatggtgtt gatgtccaag ttattggtcg
    31081 gttcgtcaag caacagcaca tccggcttgg agaacagggc ttgcgccagc aatacgcgca
    31141 gtttgaagcc cggggcgact tccgccattt tcgcattgtg caaatcttcg gaaatgccca
    31201 cgccgctcaa cagttcggcg gcacgcgctt cggcggtgta gccgtcgtat tcggcgaact
    31261 tggcttccag ttcggcggct ttcatgtagt cgtcttcggt ggcttcggga ttggcgtaaa
    31321 tcgcatcacg ttcggtcatc gccgcccaca tttcggtatg ccccatcatc accacgtcca
    31381 gcacgcgcat gtcttcgtag gcaaactggt cttggcgcaa tttacccaaa cgcacgccgt
    31441 tttcaattgc gacttcaccg gcggtctgtt ccaaatcgcc gccgaggatt ttcatgaagg
    31501 tggatttgcc tgagccgttg gcgccgatca aaccgtagcg gctgccttcg ccgaatttga
    31561 cggatacgtt ttcaaatagc ggcttcgcgc cgaactgcat ggtgatgccg ttggtagaaa
    31621 tcatgattgg taaagccttt attgaacaag agattaaatt tttcgaattt tcggattgta
    31681 acataaccgc cccgccgtct gaaacagacg ggcaaatttt cagacactta tagtaaaata
    31741 tccgttttat tatttcagac aaaaggtttc caaatgatag tccttcacgg catcccaaat
    31801 tgcgatacgg tcaaaaaagc caaaaaccga cttgccggat acggcttgga gtttgagttt
    31861 cgggatttca aaaaacagat gccgtctgaa gcggaaatct gctcgtggct ggaacaagtg
    31921 cctttggaaa ccctgctcaa caaacgcggg acaagctggc gcaaactcga tgccgaaaca
    31981 cagcaaaaag ccctgtcctc gacagcggag gccgtcaaac tgatgtccga aatgccgagc
    32041 ctgatcaagc gtcccgtatt ggagtgcggc ggcaaggttt acgccggctt cagcgaagaa
    32101 acctacgacg gcatcttcaa ccggcaagcc ccgtgcagac agggataaaa accgttacaa
    32161 tacccgactt gaatttccca ttctatatcc cgatttaaaa tatgttccat tccatcgaaa
    32221 aatacagaac gcccgcccaa gtccttttgg gcctgattgc attaaccttc gtcggcttcg
    32281 gggtcagcac ggtatcccat ccgggtgccg actacatcgt ccaagtgggc gacgaaaaaa
    32341 tcagcgacca ctccatcaac aacgccatac agaacgaaca ggcggacggc ggcggccctt
    32401 cgcgcgacgc ggtgttccaa tccctgctgc aacgcgccta cctgaaacag ggcgcgaagc
    32461 tgttaggcat ttcggtttct tccgaacaaa tcaagcaaat tatcgtggac gatcccaatt
    32521 tccacgacgc aaacggcaaa ttcgaccacg cgcttttaaa ccgctacctt tcccaacgcc
    32581 atatgtctga agaccagttt gtcgaagaaa tccgcgatca gtttgccttg cagaatttgg
    32641 taaacctcgt ccaaaacggc gtattggtcg gcgacgcgca ggcggaacag ctgatcaggc
    32701 tgacgcaggt caaccgcacc atccgttcgc acactttcaa ccccgacgag ttcatcgccc
    32761 aagtcaaagt gtctgaagcc gatttgcaga aattttataa tgcgaacaaa aaagactatc
    32821 tgctgccgca ggcggtcaaa ttggaatatg tcgccttgaa tctgaaggat tttgcagaca
    32881 agcaaaccgt cagtgaaacg gaagtgaaaa atgcgtttga agagcgcgtg gcgcgtttgc
    32941 cggcaaatga agccaaactt tctttcgagc aggaaaaagc cgccgtcgaa aacgaattga
    33001 aaatgaaaaa ggcggttgcc gacttcaata aggcaaaaga aaagctgagc gatgacgcgt
    33061 tcaaccatcc cgcttcgctt gccgaagccg ccaaaaacag cagtttgaaa gtcgaaaccc
    33121 aagaaacttg gctgagcagg caggacgcgc aaatgtccgg actgcctgaa aacctgatca
    33181 atgccatatt cagcgacgac gtattgaaga aaaaacacaa ttccgaagtg ttgtctatca
    33241 ataatgaaat cgcgtgggtc gtccgcgcca aagaagtccg cgaagagaaa accctgccgt
    33301 ttgccgaagc caaagatgcg gtgcgtcagg cttatatccg tgccgaagcc gccaaacttg
    33361 ccgaaaacaa ggcaaaagac gtgcttaccc aactgaacgg cggcaaggca gttgatgtga
    33421 aatggtcgga agtgtccgtt ttgggcgcgc agcaggcaag gcagtccatg ccgcccgagg
    33481 cttatgcgga actgctgaaa gcaaaaccga caaacggcaa acccgcctac gtcaggctga
    33541 ccggtctgcc ggcacccgtg attgtcgaag tacaggctat aaccccgccg gatgatatcg
    33601 ccgcacagct tccgcttgca aaacaggctt tggcgcagca gcagtctgcc aataccttcg
    33661 acttgttgat acgttatttc aacggcaaaa tcaaacagac caaaggagcg caatcggtcg
    33721 acaacggcgg cggtcagtaa ttgacacttt tgttgacaaa ataacggtcg gaatattccg
    33781 gccgttttcc catacggcgg aatatgatga gccacaaaaa acaagatgcc ttccaaggat
    33841 tgatcgacgc gctgaaggtt ttacccaacg tcgggccgaa atcggcacag cggatagcgt
    33901 atcatttgct ccaacacaag cgcaaagagg ctgaaaaact ggtggatgcc ttgcagacgg
    33961 cattgaagca ggttcaccat tgcgcgatgt gcaacacgtt ttgcgaaggc ggattgtgcg
    34021 atatttgtgc cgatgaaaca cgcgacgggc ggcggctgat ggtggtgcat atgcctgccg
    34081 acgtgtcgaa tatggaagtg gcaaactgcc acgacgggct gtatttcgtc ctgatggggc
    34141 aaatcaatac ggcattggga atggacgtat ccgccatcgc attggacagg ctggcgcaac
    34201 ggctgggcgg cggggaagtc gaagaaatca ttattgcaac cgcttttacc gcagaaggca
    34261 atgcgacggc gtatgtcctg tccgagtttt ttaaaaacct gccttacaaa gtcagcaggc
    34321 tgtcgcaggg catccccttg ggcggcgaat tggaatatgt cgatgcggga acgctggcgc
    34381 aggcggtgta cgaacgccgc ctgattaaag aaggcggggc ataacgccgc caatgcaaaa
    34441 tgccgtctga agccttcaga cggcattttt ccgggcggtt tacttgcagt ttagcccttg
    34501 aatctgcaat gcgcctccgt tgccgacttt gaacacgcac tgcgtcgcgc tgctgccgga
    34561 cacggtaatg ctgccgctgc cgccgttcag gctgataggt tccttaacac ccataccgac
    34621 tgccgttgcc gccagctttt gcgcgtcggc ttcggaataa ggcgtgttgt tggcatcgat
    34681 tttgatttct ttggcgtagg cagccgcagc ggcggataag gcgatggcgc acaaagcaaa
    34741 agcagttcgg atattcattg ttttcctcaa gaaacggttt ttctgaagga aaggataggg
    34801 cagtttgacg cgttgtgcaa gttttccgcc cgctctgccg ccccgtcccc cgcactcggg
    34861 cgttcggacg ctgcctgggt tttacggtac aataaacttt tgccgccgcc cccaaaccgc
    34921 cgtccggggc ggcacgtttg cagacatttt taaggtagcg ttatgttttc tctagaggct
    34981 tggataggct tgaggtatct cagggcgaaa aagcgcaacg gctttatgtc gtttatcacg
    35041 atggtttcga ttgccggaat cgccttgggc gtaaccgcgc tgattgtcgt cttgtcggtt
    35101 atgaacggct ttcagaaaga aatacgcggg cagctcctga atgtcgcgcc gcacgccgaa
    35161 atcggctata tcgacaatac ggatacggat tggcgcaacc tgcttcgatt taccgaaaac
    35221 cgcaaaggta ttttggctgc cgcgccctat gtttccaatc aggcattgct ggccaatgcg
    35281 ggcgaaatca ggggcgtgca gatgcgcggc attttgccgt ctgaagagcg caaagtggtg
    35341 gaatacggcg acaaaatgcc ggcaggcaaa tttgaagacc tgattccggg cgagtttgac
    35401 attatcctcg gtgtcggctt ggcggaggct ttgggggcgg aagtcggcaa taaagttacc
    35461 gtcatcacgc cggagggcaa tgttacgccc gccggagtcg taccgaggtt gaaacagttt
    35521 accgtggtcg gtctggttaa gacgggtgtt tacgaagtgg acaactcctt ggcgatgacg
    35581 catatccaag acgcgcgcgt actgtaccgc ttggataagg aagttgcggg gctgcggctg
    35641 aaactcgccg acccgcaaaa cgcccccgcc ttgacggcaa agctgattcc ggaggcgcaa
    35701 agggatacgg tttgggtgcg cgattggacg ttcagcaatc gaagctattt tgaggcggtc
    35761 gagttggaaa aacggatgat gttcatcatc ctgacgctga ttatcgccgt ggcggcgttc
    35821 aaccttgtct cttccttggt gatggcggtt acggaaaagc aggcggacat tgcgatttta
    35881 cggactttgg gtctttcccc tgccggcgtg atgaagattt ttatggtgca gggcgcgttt
    35941 tcaggctttt tcggcacgct ggcgggtgtg gtctgcggcg tgcttttggg ttggaacgtc
    36001 ggcagagtcg tggcgttttt tgaaaacctg ctcggtgtcc accttatcaa ttcgcaggtt
    36061 tattttatcg actacctgcc cagcgatgtc gatatgggcg acgttgccct gattgcctgc
    36121 atttctttgg gactgtcttt cgtggcgacg ctctacccga gctggcgcgc gtcaaaaacc
    36181 caaccggcgg aggctttgcg ttatgagtga gttgattttg aaatgcgaag gcgtgggcaa
    36241 acgctaccgt gacggcggtt tggacgttcg ggtgctgcac ggcttggatt tggaaatcct
    36301 cgcgggggaa agtaccggca tcatcggttc ttcgggcagc ggcaaatcga cgctgctgca
    36361 tattttgggc gggctggata tgccgtctga aggcagggtg ctgctgatgg gcgaggattt
    36421 gcgtacatta agccagcgac aactgggcat cctgcgcaac cgccatctcg gtttcgtgta
    36481 ccagttccac catcttctgc ctgaattttc ggcactggaa aacgtgatga tgccgcttct
    36541 gatcggcaag aaaaaacggg aagaggcggc agaaacggca atggcgatgc tggaaaaggt
    36601 cggattgaag caccgttcgg cgcaccgcgc gggcgaactg tccggcggtg agcggcagcg
    36661 tgccgccatt gcacgcgcct tggttacgca acccaaatgc ctgcttgccg acgaaccgac
    36721 cggcaatctc gatcgtgcga acgccaggaa tgttttggat atgatgctgg aactgaaaac
    36781 agaattggga acggggctgg tggtcgtaac gcacgacgac gaactcgccg gccgcttcga
    36841 gcgcgtgatg gtcatgaaag acggcagcct gcaccccaaa cagggcgcaa acgcctaaac
    36901 agccgaaaca acaccgcgcc gtctgaagcc ccacgccttc agacggcatt tggataagga
    36961 atacaatgga acggcagaca gatgaatttg cccaagcggc ggcaagggcg gcaatctggt
    37021 ttttggcacg ctatgcgggt tcaggcagcg aagtgcttgc aaactgcacc gaacgcctgt
    37081 ttcaggcatt gcaaaacggt cattcgttta tccgtttgag cggtggcgag gctgacgcgc
    37141 tgtcggcact cgcacccgtg gtcggaacat ccgccgcgcc tttgattttg gaaggcagaa
    37201 ggctgttttt gggcaggatg tggcagttgg aatacgattt ggctgccgag ataaaacgct
    37261 tggcggcagc cggcacgtcc gcccccgacg cggcaggcgc gcggcaaaac ctcgcaaaat
    37321 ggtttcaagg cacgggcagc gaagggcagc gcgatgccgc cgccttggca ctgttgcagt
    37381 cttttatggt gattaccggc gggccaggaa cgggcaaaac gacaacggtt gccaaactgc
    37441 tggcgctgat ttgcggtgaa gacgaaaatc ttcccaacat cgcgcttgcc gcaccgacag
    37501 gcaaagcggc ggcacatatg gcgcgcgcgc tgcaccgtgc aatcaacggt tttgacgcgc
    37561 cggaggccat ccgccgccat ttgctcaaac tggaagggca aaccgtccac cgactgctga
    37621 agctgcgccc gcccaaaatg caggcggcgt tcaaccctgt ttacccgctg ccgttggacg
    37681 tattggttat cgatgaagcc tccatgttgg ataccgcatt gatgttgcaa cttttaaaag
    37741 cggtcaaaac cggcgcgcgc gtgattctgc tgggggatga aaaccagctc ccgtccgtcg
    37801 gaatcggggc ggtgctgtcc gttttgtcgc acaaaaccgt tttggacgga gaaacgcacc
    37861 aaaggctggc cggcttcctt ccggaacacg gtttcagcgt cagcgcaaat ccgcccgtgt
    37921 tggcgcaaaa caccgcccat ctgtcgttca gccaccgctt cggcgacaac agtggcatcg
    37981 gctgccttgc ccgtgccgcc gtatcgggcg atgagggggc gtgggcattg tttgaccggt
    38041 ttccggacga actggaacat tcggaatgca gtccgaacgc tcgagtcgaa aggttgtacc
    38101 gggcgcacaa agcctattgg caggcggtaa aagacggcaa tatcgaagcc gcatacgcag
    38161 gcatctcgga tatcgtggtc ctggcagctt ggcggcagga tgcggaagac ttcaacgaag
    38221 cctattgcag ccatgtacgc cgcaaaatga acataccgga acatcaggcc tatttcgccg
    38281 gagaaccgat tatgatcaga cagaacgact acgcgcttga actgttcaac ggcgacatcg
    38341 gattgattat ggaagatgtc ggacggcagg gcagccttgc cgcctatttt gccgatgcgg
    38401 acggatttaa aaaggtagcg gtaagctgcc tgcccgattt cgaacccgca ttcgccatga
    38461 ccgtccacaa aagccaaggt tcggaatatc gggaagtctg gctgctgccg ccttccgccg
    38521 caccttcgga cgaaggggac gatgcattgt ccggattgag taaggagctg ttatataccg
    38581 ccattacccg cgcgagggag aagttcgtat tcttcggcgg agaagaaacc ttccggcaag
    38641 ctgccgccac tgtcaaaacg cgtcagacgg cattgggcag tatgctcgag cgggtatttt
    38701 cacaagaata atccgcccga atgccgcgcc gccgcccctt atgccttttt caaacggtat
    38761 aggaaagtgg tttcccgggt tcgcgcaaaa gcaagcggat cgctcggatt cgcggctttt
    38821 ttgtgcttcg gcttggtttt catcatatcg gcaacacgca aacccgcccg gataaatgcc
    38881 ttttccaaaa aatcggcagg gcgcagcccc aaatgctctg caaggtcgga aataatcagg
    38941 cggatttctc cgtcgggatt cagatgtttc ggcgcatccc gcaaaaacgc agccagcatc
    39001 gcagattcgg ggtcgtataa cgcggattcg acggcggaag tcggcttggc gggaagccag
    39061 ggtggattgc agacaatcag atcggcaaac ccttcgggaa acagatcggt ttcccgtatc
    39121 tcaacctgtt tttcaaagcc caaacgggca atattggcac gggcgcaggc gacggctttc
    39181 ggattggtat ccgtgccgat gacggaagga atgccctgtt tcgccaaaat ggcggcaagc
    39241 acgcccgagc ccgtcccgat atcgaatgcc gtctgaaaac ccgttgacgg cgcatgggcg
    39301 agcaggtcga ggtattcgcc gcgcaacggc gagaatacgc cgaaaggaac gtgtatgctg
    39361 ccgcccagct gcggaacggc aacccctttc ttatgccact cgtgcgcacc cataaacccc
    39421 agcagcagat tgagcggcag gaaaaacggt ttgccgtccg cctctccgta cacgtcgagc
    39481 agggcggcgc gtatatcggg cgcgcgtttg ttgtccaaca caaaaccggg gcggatttca
    39541 acggcaagca tattcagaat acggctctgc tgcgcctgct tcatacggtg ggcatggaaa
    39601 agggcggcga tatccgcatc ggaacggacg gcggcaggtt tgcgagccct cttcttcatt
    39661 gcagaaagca cctgtttggc attgtggaaa tcgccctgcc agacagttgc aatattttga
    39721 taggcagcct tcaaaatgcc gtctgcaccg ctttcgcgga cataatgcca acctttgggc
    39781 ggcttttgca cactttcgtt gcgccattcg gccccgttat cgggaaaaat aaaagaagac
    39841 atgggatacc tgcgtcatgt tttgaaaata gggcggcaga accgtaaacc atacggatgg
    39901 tacagcaagg agcggcaaca cagaacagtt ttttgttccc gccttgtctt tccaagccca
    39961 tgcagtctga agccggaatg tttcagacgg catcgcatca aactccataa ataaaccaca
    40021 tatgcttgaa ataatacctt caaccccaat gtacgcgaaa atcggcaatc tgtcagacac
    40081 aagagagtac ctatgacaca aaaagaaaag cattttgagg aatatgccgc cttggcaacc
    40141 cttcctttgc gggatgtcgt cgtttacccg catatggttc tgccgctgtt tgtcggcagg
    40201 ccgaaatcca tcgccgcact ggaaaacgcc attacccgcg aggaaccggt tttcctattg
    40261 gcacaaaccg atgcggcgct agaagaaccg gttgccgccg acctgtatca gaccggtacc
    40321 gtcgcacaag tcttacaggt attgaaactg ccggacggca cggtaaaagt attggtcgaa
    40381 ggtctgtatc gcggacgtgt tctgaccatc gaagacacgg gcggtctgtt cgtttcccat
    40441 atagaggcgg tcgtggaaga agacacgggc ggcaataccg acctcgaagc cgtgcgccgc
    40501 accctgttgg cgcagtttga acaatacgcc aaactcaata aaaaaatccc cgccgaaatt
    40561 atcggcagca tcaacggcat tgccgaaaac agccggctaa ccgatacggt cgcagcgcat
    40621 ttgcagttga aactggcgca acgccaacag attttggaaa ttcccgaaat cggcaaacgg
    40681 atggaattcc tgctggcaca gctggaatcc gaactcgaca ttatgcaggc cgaaaaacgc
    40741 atacgcggac gcgtcaaacg ccaaatggaa aaatcccagc gcgaatatta tctgaacgaa
    40801 cagattaaag cgatacacaa agaattgggc gaagaagacg aaaacggcga actggatgcc
    40861 ttggaagcag gcatcaaaaa ggcggggatg agcaaagaag cggaagaaaa atgcctgtcc
    40921 gaactgaaaa agctcaaaat gatgccgccg atgtctgccg aatccaccgt cgtacgcaac
    40981 tacatcgaca ccctgctcga actgccgtgg aagaaaaaat cccgcgtcag caaagacatc
    41041 gccaaagccg gattggtgct ggataccgac cactacggcc tggaaaaagt caaagaacgg
    41101 attttggaat acctcgccgt ccaaaaacgt atggacaaac tcaaaggccc gattctgtgc
    41161 ctggtcggcc ctccaggcgt gggcaaaacc tctttgggcg aatccatcgc caaagcaacg
    41221 gggcggaaat atgtccgcat ggctttgggc ggcgtgcgcg acgaaagcga aatccgggga
    41281 caccgccgca cctatatcgg ctccatgccc ggtaagattt tgcagaatat ggcaaaagcc
    41341 ggcgtaaaaa acccattgtt cctgctcgac gaaatcgaca aattgggtag cgacttccgg
    41401 ggcgatcccg ccagcgcgtt gctcgaagtg cttgatcccg agcaaaacaa caagttcgcc
    41461 gatcattatg ccgaagtgga ttacgatttg agcgatgtga tgtttattgc gacttcaaac
    41521 agcctgaata tcccgacccc gctgctcgac cgtatggaaa tcatccgtct gtccggctac
    41581 accgaagacg aaaaaatcaa tatcgcgatg cagtacctcg tgccgaagca aatgaagcgc
    41641 aacggcgtga aagaaggcga attgctcgtc gaagaaagcg cggtgcgcga tattatccgt
    41701 tactacaccc gcgaggcggg cgtgcgttcg ctcgaccgcg agattgccaa aatctgccgc
    41761 aaggtggtga tgcagattac cttggacgaa gataagaaga ggttgtctga aaccaagaaa
    41821 accagcaaag ccaaacctaa agcggttaaa gtaaatgaga aaaatctgca cgactatttg
    41881 ggtgtgcgcc gcttcgatta cggcgttgcc gaaagcgaaa accgtatcgg acaagtaacc
    41941 ggtctggcgt ggacagaagt cggcggcgaa ttgctgaccg tcgaagccgc agcattgccg
    42001 ggtaagggcg tgattcagtg caccggccag ttgggcgatg tgatgaagga atccgtgtct
    42061 gcagcgtggt cggttgtccg ctcccgcgcg gaatcagtgg gcttggcttc tgatttttac
    42121 gagaaaaaag acatccatgt ccatgttccc gaaggtgcaa cgccgaagga cggtccgagt
    42181 gcgggcattg ccatgacttt ggcgatggtg tctgcatttt ccaaaatccc ggtacgcgcc
    42241 gatgtagcga tgacgggcga aattaccctg cgcggcgaag tcctgccgat tggcggtctg
    42301 aaggaaaaac tgttggctgc gcttcgcggc ggcatcaaac acgttttaat tccaaaagac
    42361 aacttcaaag acttggaaga aatccctgaa aacgtgaaaa ccggcctgac catccatccg
    42421 gtcaaatgga tagacgaggt attggctctg ggtttggaaa gccagcctga gccttgggca
    42481 gaaccttctg gtgcggaagc ggtggcggaa tccgcttcaa aaccaaaacc ccgcagcagg
    42541 gcaaccaaac attgaaacgc aggaaatgtg ttgtaaaaat gcggtttcgt cctgaaagcc
    42601 tgtcaaatag ggtgattccg tattttttgc ttgacacggc aatttcagaa ttgctataaa
    42661 gcgaaagttg ctcaagcagt acaaaccccg agtattcggg catttcatca ttttttaaga
    42721 caggaaggga ctgattgtga acaagtctga attgatcgaa gcgattgctc aagaagccga
    42781 catttccaaa gccgccgcac aaaaagcttt ggatgccact accaatgcag taaccaccgc
    42841 cctgaaacaa ggcgacaccg ttactttggt cggtttcggt actttctacg tgggcgaacg
    42901 tgcggaacgc caaggccgca accccaaaac cggcgagcct ctgaccattg ccgccgccaa
    42961 aacgcctaaa ttccgtgcag gtaaagcatt gaaagacgca ctgtaagccg ttttttatga
    43021 aaaaagccga ttctttaaag aatcggcttt tttatcggtc cacattattc tgatttcaaa
    43081 tcggcaacac actgcttgtc tcgcgtttca aaggcatttg cgccgccgag caggtcaagc
    43141 tgttcttgtg cgccgagttt gccgaaggaa ctaatctgtt tctcgctcaa tctgtccaaa
    43201 ggctgctccc acatacattt gcagtagtcg acggtaaggc gggtattgtt tgaatctaaa
    43261 ccgcgggccc gcaaatcgtt ttgccatttt tcggcaaacg gaatattctt cacgcaagac
    43321 tcgacaattt tctgttttgc ctgcggtttg gacatcgcgc attgggagag cagggcggtt
    43381 gaagcgagca acgccaaaat gacccatgcc caaatgcgga tggtgcggat tttggctttt
    43441 gcttttttgc gcgcggcaac ctgctcttcc gtcggcattt cgtgtttcgg ctcagtcatg
    43501 caggctttcc atgcggatca tggtaatcgg tttttccacg caatccagtg cttcgatggc
    43561 tgcgattgcc gacttgatgt gtttttcgac cgtgctgtgg gtcagaatca cgatttcggc
    43621 agtggtctga tcaatcacgc ctttttgaat cagtgcttcg atggacacgt tttcttgtgc
    43681 caacagcgcg gcgatttgcc ccagcgtgcc cggttcgtct ttggcttgga cgcgcaggta
    43741 gtagctgctg gtaatttcgt ccataggcag gatggtttgc gcttggactt gcgcgggttg
    43801 gaacgccaga tgcggtacgc ggtgggcggt atcggcttca accaggcggg cgatgtcgat
    43861 gatatcggca accacggcgg aagcggtcgg caatgcgccc gcgcccgcgc cgtaatataa
    43921 ggtttcgcca accatatcgg cgttgacgcg cacggcgttc atcacgccgt tgacgtttgc
    43981 caagaggcgg ctttcgggaa tcagggtagg gtggacgcgc agctcgatgc ctttgccggt
    44041 tttgcgggta atgcccaaca gtttgatgcg atagccaagt tcttcggcgt atttgatgtc
    44101 gcggctgtcg agtttgctga tgccttcgag gtagcaggcg gaaaagttca tcggcgtgcc
    44161 gaatgccagt gcgctcatga tggtgatttt atggcccgca tcgttgcctt cgatgtcgaa
    44221 ggtcggatcg gcttcggcat aacccaatgc ctgcgcttct ttcagtacat cggcaaacgc
    44281 gctgcctttt tcgcgcattt cggagaggat gaagttgctg gtgccgttaa taatgccggc
    44341 gatggattta atcctgtttg ccgccaaacc ttcgcgcagg gctttgatga ttgggatacc
    44401 gcccgctact gccgcttcaa attgcaccat gacatttttt tcttccgcca gcgggaagat
    44461 ttcgttgccg tattcggcga gcagtttttt gttggcggta acgatgtgtt tgccgttttc
    44521 aatggctttc aacaccgcat ctttggcaat gcccgtgccg ccgaacaatt cgacgacgac
    44581 atcgacgtct ttacgcgcga ccagttcgaa cggatctttg acaaaggctg cggacgggca
    44641 gatttggcgg gctttttctt cgctcaagtc gcatacggca ctgatgcgca cttcgcgccc
    44701 caagcggcgg gaaatttcct ccgcgttgtc ccgcaacacg gcagccgtac cgccgccgac
    44761 cgtacccaaa cctaaaagac cgatgtttac tggcttcatt gtgtctcctt gtaagccgac
    44821 tgaaatgtaa atattgaaag acgaaaatat ccgctgccga tataattgtg ccgcactttg
    44881 aatcaaatgc cgtctgaaat cggcaggcgg gtcagatgaa atctgccaat cctacatgaa
    44941 ttcgcctgat tttgcacccc tttcggtgta gatgatgcgg caacggggta aaaaaatgtt
    45001 gtttgaagaa aatccgatag acggacagtt tgcggaatat gaatgcggtg cgggcggaat
    45061 ccggctggcg gggcaaagtt tccataaacc cgtgcttgta cataaggatt cggtctgcct
    45121 gtcgcaatgc cgaaccttgt ccgatctgac tccggaaaac ctgttgtccg acatcaaacc
    45181 tgttgactat ctggaaatat tgattatcgg gacgggcgcg gctcaggagt ttatccatcc
    45241 caaaatcatg gcggattttt ctcgaatcgg aatcggcgtg gaatgtatga ataccgattc
    45301 ggcattcagg acattggttt tcctgcactc ggaagggcgc agggcttggg cttggcttca
    45361 gccgtaaatt tcccgtttca gacggcatcg gcactgactt tcaggtaaaa tacgggcttt
    45421 tcccgcccga cgatgtttcc gttatgattg aaatcaaaaa cctcaccctg caacgcggtt
    45481 tgaaagtcct gctcgacaaa gccaacgcta ccgtcaatcc cggtcagcgc gtcggtttga
    45541 tcggcaaaaa cgggacgggc aaatcgagcc tgtttgcctt aatcaagggt gaaatcactc
    45601 aggacggcgg cgatgtctcg attccgaaaa actggcggct cgcttccgtt tcccaagaaa
    45661 cgcccgattt ggatatttcc gctttagatt acgttttgca gggcgatgcc gagttacaga
    45721 cccttcagac ggcattgagg caggcggaag cgcaaaacga cggtatgaaa caggcggaat
    45781 atcatgccaa attggaagaa atcgacgctt ataccgcgcc ggcccgcgcg gcaaaattgt
    45841 tgaacgggct gggtttttcg caagaagaac acagccgccc cgtcaaatcc ttttccggcg
    45901 gctggcgtat gcgcttgaat cttgcgcaag ccctgatttg ccgcgccgat ttgctgcttt
    45961 tggacgaacc gaccaaccac ttggatttgg aaaccgtctt gtggctggaa aaccaccttg
    46021 cctctttacc ctgcacgcaa atcatcattt cccacgaccg cgatttcctc aatgcggcaa
    46081 ccacccaaac catcgaattg tcccagcaaa agctcacgca atacggcggc aattacgatt
    46141 tttaccaaaa cgaacgcgcg cagcgtctcg cgcagcaaca agccgcctat gtcaaacagc
    46201 aggcgcaaat caaacatctg caatccttta tcgaccgctt caaagccaaa gccaccaaag
    46261 ccgttcaggc gcaaagccgc atgaaggctt tggcaaagct cgaacgcatc gctcccgcgc
    46321 atttggacag cgagttttcc tttgagtttt acaatcccga gcatctgccc aatcctttgc
    46381 tgaagctgga acacgcagat ttgggttacg aaggcaaaac tgttttgcac gacattaccc
    46441 tgtcgctgga aagcggcgcg cgctatggtt tattgggtgt caacggcagc ggtaaatcta
    46501 catttatcaa agccttggcg ggcaaaatcg atttgctctc tggcagcatc gtccgttccg
    46561 aaaaactcaa tatcggctat tttgcccaac accaactcga taccatccgc gccgaccaaa
    46621 accctgtttg gcatattcag cagctttctc ccgaagtacg cgaacaagaa atccgaaatt
    46681 tcctcggcgg cttcaatttt gttggcgata tggcgttaca gaaaaccgaa cctttttccg
    46741 gcggagaaaa agcccgcctt gcccttgcca tgattatctg gcaaaagccg aacctgttgc
    46801 tgcttgacga accgaccaac catttggact tggatatgcg ccacgcctta acgctcgcgt
    46861 tgcaaagttt ccaaggcgcc ttaatcatcg tatcgcacga ccgcagcctg cttgaagcga
    46921 ctaccgacag cttcctcctg atcgacaaag gccgtctgaa gaacttcgac ggcgatttga
    46981 acgattaccg ccaatggcgt ttggcacagg aaaacgccgc cgccgcaccc gcagcatccg
    47041 cacaaagcca aagccgcaaa gacaccaagc gcatcgaagc gcaaatccgt caggaaaaag
    47101 cccgacgcgg caagccgata cagcagaaaa tagaccgtgc cgaaaaagaa atggcgcagc
    47161 tttccgaaat tcagacggca tgtgaagcat ttttagcaca agaagacgct taccttgaag
    47221 caaacaaaga aaaattgcaa aataccttat cccagctggc aaaagtcaaa acacaacttg
    47281 cccaaatcga agaggtttgg ctggcttgtc aagaagaatt ggaacggatt gaaactgaaa
    47341 tcgagaaaca gtttgccgag cgataaagaa gcgcgggcag ggtgcttatc tttgcctgcc
    47401 aataacggta taattcgggc gttattaccg ccttttaccg gtataaacat cagacttttt
    47461 gccgccttgg gtctcctgtc cctttccggc gcggcggcgc aagcctccgt ataccattgc
    47521 aactcaaatg gcaaaagcgt atatacatca gccccagcag gatcgtgcgc cgatgcggat
    47581 ttacctaaaa tcagcagcca tcagggaggc ggataccgcc tgaaaattaa aaaactcagt
    47641 taagaagcca aaatacacat agaaagtaaa aagaaaaaca aaaaacctgc cgggaaaaag
    47701 aacaagcagg ctgccaaagc cccgaaagaa aatcaaaagc aaacaaccga aaagaaaagc
    47761 ccgtaaaacg ccaagaaagc attataaaaa ataccaaaaa atcaaataat tatccgagca
    47821 tcaagcacat tatgaaatca aaactcccct taatcctaat caacttttcc ctgatttcaa
    47881 gcccattggg tgcgaatgcg gccaaaatct acacctgcac aatcaacgga gaaaccgttt
    47941 acaccaccaa gccgtccaaa agctgccact caaccgattt gcccccaatc ggcaactaca
    48001 gcagcgaacg ctatatcccg ccccaaacgc ccgaaccggt atcatcaccg tcaaacggcg
    48061 gacaggttgt caaatataaa gccccggtca aaacagtatc caagccggca aaatccaata
    48121 cgccgccgcc gcaacaagca ccctcaaaca acagcagacg ctccattctc gaagcagaat
    48181 tgagcaacga acgcaaagcc ctgactgaag cccaaaaaat gttatcacaa gcacgtctgg
    48241 caaagggcgg caacatcaac catcaagaaa taaatgcatt acaaagcaat gtattggaca
    48301 ggcagcaaaa tattcaagcc ctgcaaaggg aactggggcg tatgtaaagc cgtgttttca
    48361 aatcgaccgt tccaaggatt tgacagaaga aatgatgaaa aagcagcggc atatcctgtg
    48421 tgtcggctgc ctgtatatta tattgaaggt caacgtattt cccaataccg gctggatgga
    48481 agcgtcgaaa gggatgcagg gcatgtcgtt cagtaccttc ggatacgcgg atgctccggg
    48541 ctatacattc agccgcattg gccatacttt aattttccta cttggaaaga ccacagggac
    48601 acgtacaact gtttccgata gttcgcataa tgtatattat gttaaattat atatttgtgc
    48661 aaataactcc aaggcattaa gctgttgttt gatgctttgc cagtttggga gaaagttgtc
    48721 catatgcgcc ataaaacggg cgttgcgatg gcgttcgagc aaatgggtca gttcgtggac
    48781 gacgacgtat taagcggtgc ggacacccga accgcgatcc cctaaatgtc ttggtgggaa
    48841 tttaggggat tttggggaat tttgcaaagg tctcaaaacc cgctcgcctt atagcctgtc
    48901 tgtgccgcca tttcagcctc caaaacccat attttcaagg tgggcattga ctttgctttg
    48961 ccacttttcc acttctcggg caagctcggc catcgggctg cggtagcggt cttccagcgt
    49021 gttcaagcgg ctgataagct gctgaatact gttttccaag cgattttcga ttcgactttg
    49081 taaatcggca agccatttgt cttgaacggc aagctgcttg atttcggctt cggaaagtcg
    49141 gccgaattgt ttgaatacgg caaggttcag ggcttcgatt tgggttttga ctgcgtcttt
    49201 cgcggctttt tcctgcgtca tcagtgtttg ggtggtttgt aaaacagccc gttcgccttc
    49261 ttctatgccg ctttcttcca atgcggtttt cagaagtttg gcggaaagtt tgccttttgc
    49321 atccaatacg tcgttcagcg caccctcttc gccgccgtgt tcttctatgt ggttttccaa
    49381 ttcttggctt aggcgttcca gctcgctttg tttttcttcc agcttggcga tgccgtctga
    49441 aaagtagcgg cgggcaacca gctcgggggc gatgacttcg ctgcggtatt ttttgctgat
    49501 gcgcttggtt ttggctttgc cttttttgtc ggtttcggtt tcctcaaaga cgacggtcag
    49561 gttcgcggct tcatcgcttt ctttggtgat ttcggccagg tttttaaccg ccttccagcc
    49621 atcttgggcg atgagataaa catcgtcttg cagggtttcc gcccagtagt ccgtcaggat
    49681 ttggtagaaa tcgtattctt caatcaggct gccgggtttg aacgcgtcca gcaggctttc
    49741 gctccatttc cggataagcc tgcccggttg gatggcggca aggtcgtttt gagtgtgcca
    49801 cgcggcaaac tttgccaggt gtccggcttt gaaggcggcg taatcggggt gcgccaatat
    49861 atgggctttg atttggctgc tttcgatttt atagtggatt aaatttgggg ctgtactaga
    49921 ttagccctaa attccacacc aatcccgcag gattttaagc tgttgagagt gggaaagatt
    49981 tgcaatcgat tccgttgtat agtggtaaag tggccatcgt gttcggcaaa caactcgttt
    50041 ttcatacggc ctaaaacttg ccaataggct tccaatgcgt ccatatcgtg cgcaggtatg
    50101 ccgccataaa gatagatagg cggcgagatt ttgcaggtct tcgacttctc cgctgtcgat
    50161 atagcgaggc agattaaggt tgtaatcttg tgctgcgatt tcgcttaaat gcaccatacg
    50221 gctgtaacga ggtttgtgaa agtgtcgatg attttgtgaa tgtcttgctc acgcagacgg
    50281 tttttgttgc cgtctttaat gaagccgcgc gatgcgtcaa tcataaacac gctgccgccg
    50341 ctgataactt ggtttgttcc ctcttcggca aattgggcgg tttgggcgtg ttctttgtcg
    50401 atgacgatga tgcaggcagg aatgcccgtg ccgtaaaaca ggttggcagg cagcccgata
    50461 atgcctttaa taaggtcaag gttaagcaat tccgtgcgaa tacgcgcttc ggcattgccg
    50521 cgaaacagca caccgtgcgg aagaataatc gcacctttgc cgcttggttt caggcttttg
    50581 agcagatgca gcaaaaaggc gtaatcgccg tttttttcgg gcgggataag gcggattggc
    50641 aacggcaaaa tcgaaggtct taagcccgtc gttttcatca cggaaagacg aatcggacaa
    50701 ggtgttcccg gtgttgattt cggcggtttc gttgttgtgc aaaatcatat tcatacgggc
    50761 aagggacgcg gttgccacat ctttttcctg accgtaaagg ctgatttggc tgccggcttg
    50821 ggcggcggct ttgagcaaca gcgaacccga gccgcaggtc gggtcataaa cgctggtgct
    50881 ggacggcaat ctgcgctgat tccgataatc ttcgccataa tgcgggagac ttcggcaggc
    50941 gtgtaaaact gccctttgga tttgcctgac tcggtcgcaa aatggcgcat caggtattcg
    51001 taggcatcac ctaacaaatc gtcgtcttcg gcttggttgg aagaaaggtt gagcttttta
    51061 aaaatgccga caagcctgct caaacggtcg atcatctcct tacctttacc cagtttgtct
    51121 tcgtcgttga agtcggtaac gtcgatcacg ccttttaagt cgttggcttc ggcaatttgg
    51181 gcgataatct tattcaggcg gtcgccgatg tcggcggtgt ttttgagttt gacgatgtcg
    51241 tcaaaagtcg taccggcgtg cagctcaatc gcgattttaa cacgccggcg gcaacggcta
    51301 tatcggcatt catagcttcc agtttatcgg ttcgataccg tgttgactca aatagctgtt
    51361 tgcctgtgaa aaatggcggc agccgaaaaa accgcgatat gccgacagag gagacggatg
    51421 cggtgcggtc aatatcaaat gattttgact gtctatcagc ctcccttttt gttgtgcata
    51481 cccaccccac aacatgaaga caaggtgctt gcggtgcgcc gcaagctgcc tgatgacggt
    51541 atcggtaaag cgttcccagc ctaaaagggc gtgcgaatgc gcctgtcctg cacgcaccgt
    51601 caaaaccgtg ttcagaagca atacgccctg ctccgcccaa gccgtcaggc agccgtgatc
    51661 gggaatggaa aaaccgttga tgtcggtttc caactctttg tagatattga gtaaagacgg
    51721 cggtatgcgg acaccctgcc tgacggaaaa tgccaaaccg tgcgcctgcc ctgccccgtg
    51781 atacgggtct tgtccgagaa tgacgacttt gactcggtca aacgctgtca ggcggaatgc
    51841 gttgaacaca tcctccgccg gcggatagat gatttgcccc gacaaacgtt cctgcctgac
    51901 tgcatttaaa atttcctgaa aatacggttg ccgtttttcg ttgcccagtg catcgtgcca
    51961 agtatccata tctgccctat cctttcaaat tcggctatac tgctgatatc gcgtgatttt
    52021 gtcaaacgac gcgctttgtg gggaaatgta tgactgtatg gtttgttgcc gctgttgccg
    52081 tcttaatcat cgaattattg acgggaacgg tttatctttt ggttgtcagc gcggctttgg
    52141 cgggttcggg cattgcttac gggctgaccg gcagcacgcc tgccgccgtc ttgaccgccg
    52201 ctctgctttc cgcgctgggt atttggttcg tacacgccaa gaccgccgtg ggaaaagttg
    52261 aaacggattc atatcaggat ttggatgccg ggcaatatgc cgaaatcctc cggcacgcag
    52321 gcggcaaccg ttacgaagtt ttttatcgcg gtacgcactg gcaggcgcaa aatacggggc
    52381 aggatgtgtt tgaaccggga acgcgcgccc tcattgtccg caaggaaggc aaccttctta
    52441 ttatcacaca cccttaacac tcggaggaat tatggaattt ttcattatct tgttggtagc
    52501 cgtcgccgtt ttcggtttca aatcctttgt tgtcatccca caacaggaag tccacgttgt
    52561 cgaaaggctt ggacgtttcc atcgcgcctt gacggccggt ttgaatattt tgattccctt
    52621 tatcgaccgc gtcgcctacc gtcattcgct gaaagaaatc cctttagacg tacccagcca
    52681 ggtctgcatc acgcgcgaca acacccagct gacggttgac ggcatcatct atttccaagt
    52741 aaccgatccc aaactcgcct catacggttc gagcaactac attatggcga ttacccagct
    52801 tgcccaaacg acgctgcgtt ccgttatcgg gcgtatggag ttggacaaaa cgtttgaaga
    52861 acgcgacgaa atcaacagca ccgtcgtttc cgccctcgat gaagccgccg gagcttgggg
    52921 tgtgaaagtt ctccgttacg aaatcaagga tttggttccg ccgcaagaaa tccttcgctc
    52981 aatgcaggcg caaattactg ccgaacgcga aaaacgcgcc cgtatcgccg aatccgaagg
    53041 ccgtaaaatc gaacaaatca accttgccag tggtcagcgc gaagccgaaa tccaacaatc
    53101 cgaaggcgag gcccaggccg cggtcaatgc gtcaaatgcc gagaaaatcg cccgcatcaa
    53161 ccgcgccaaa ggcgaagcgg aatccctgcg ccttgttgcc gaagccaatg ccgaagccat
    53221 ccgtcaaatt gccgccgccc ttcaaaccca aggcggcgcg gatgcggtca atctgaagat
    53281 tgcggaacaa tacgtcgctg cgttcaacaa tcttgccaaa gaaagcaata cgctgattat
    53341 gcccgccaat gttgccgaca tcggcagcct gatttctgcc ggtatgaaaa ttatcgacag
    53401 cagcaaaacc gccaaataag ccgtgatgaa aatgccgtct gaagctctgt tttcggggtt
    53461 cagacggcat ttttatttaa acccgggcaa ggttgtattc cgcttcaaat tatagtggat
    53521 taacaaaaac cagtacggcg ttgcctcgcc ttgccgtact atctgtactg tctgcggctt
    53581 cgtcgccttg tcctgatttt tgttaatcca ctatatttaa acccgggcag ggttgtatcc
    53641 cgcttcaaat atgtttcgga accgcctacc tgccccggta aaaactgccg gcaaaatatt
    53701 tctgcacgcc ctcgcgaagc aagaccaagg ttacggcggc caaaggcaat cctgccaaca
    53761 ttccgacgaa acccatcagc tgtccgaacg ccatcaggga aaagataacc caaaacggcg
    53821 acagcccgat acggtctccc acgattttcg gcgtaatgaa aaaactttcg agaaactgtc
    53881 ctacggcaaa aaccgcccaa accgatagga tgccgttcca cgaaccgaac tggagcaagg
    53941 cggcgacggt tgccagcagc agtcctgtaa acgcgcccaa atagggaaca aaaaccaaaa
    54001 taccggcaac cataccgatt gcaaaccccg aatccagccc gaccagcacc aaccccaagc
    54061 cgtaaaccaa acccataatc agcatcacca gaagctgccc gcgcaaaaat tcgcccaata
    54121 cctcgttcaa attacccgta atgcgcgtat aagcaccggc aaaacgcctc ggaaccagtt
    54181 tggcgatgcc gcacgaccac cgctgccaat ccagcaggaa ataataaagc agcaagggca
    54241 gcagcagtag gttgccgata ctgctgacaa tattgccgcc ctgcctcatc aaaacgggaa
    54301 accacgcctt aagcgcgttg ctcaactcgc ccgtatgcgc ctgaagccac gcaataatag
    54361 atgcctgatc gatttccata tatccgccga ttgtattttt caaccacggc agcagcgtgt
    54421 tctgcataaa actgatcaat tggggtaggc gcgatgccaa attattgaac tgcccgacca
    54481 gcatagggac aataatcaac aataatgcca acaacaaaat caaggaaaac accatcacag
    54541 acatcgaagc ggatgcacgg ttcaaaccct ttttctgcaa ccattcgacc aaagggtcca
    54601 acacatacgc cagcaccgcc gcaaccgcaa acggagtcaa agtatcgccg agcgcgaaaa
    54661 tcagccaaac caaggcggca aacgccgcac cggcacccat ccacggcttg atgccccacc
    54721 ctttcctccg atacataaaa accacccttc taaaaataat attgcgcgcc agtatagcag
    54781 aaccgccgcg ccgtcaaaaa agcctccgcc ttcccgatag cctgttatcg cggtttaggc
    54841 taaaataacg cacatccgat gccgtctgaa aggcaaaccc gccttcagac ggcataccgt
    54901 acacaacaag gcagcacatc atgaccgaac aagaaaacaa aacatccctc atcgaatttc
    54961 cctgcacctt cccattaaaa gtaatggggg cggttcatcc cgagttcgag caggcggtat
    55021 tggacaccgt ccgcctccac gcccccgaca cgcaggcgca ccacatcacc acgcgtccga
    55081 gcagcaaagg caactatacc ggcgccaccg ttcaggtaaa ggttgaaaac caagaacaat
    55141 tggacaacat ctaccgcgcg ctgacttcgc acgaactggt caaagtggta ctttgagatg
    55201 aaaatcatac acaaaggttt ggtcgaatat ctgccgactt ttgaagcgat gaaaaccttt
    55261 aatgccggac ggaatgctga caccgaagac gaactgtggg tcgtcgaaca cccgcccgtg
    55321 ttcacacaag gactggtggg aaaacccgaa cacctgctga ttcgcgacga cattcccgtc
    55381 gtccaaatcg accggggcgg gcagattacc tatcacgggc ccgggcaatt ggtcgtttat
    55441 acgatgattg atttcaaacg gcgcaaaacc agcgtccgca acatcgtttc cgcgcttgaa
    55501 aacagcatca tcgccacatt ggcagaatac ggcatcgaag cggcggcaga ccccaaacgc
    55561 cccggcgttt atgtcggaga acgcaaaatc gcctcactgg ggctgcgtat caaaaacggc
    55621 tccgtctatc acgggcttgc gctcaacgtc aatatggatt taagcccgtt tacccacatc
    55681 aacccctgcg gctacgccgg tatggaaatg acgcaaatcg cggattttgt ccaaccctgc
    55741 cccacgccgg acgaagtcgc cgccaaactt accgcacacc ttgaaacaca attcacaccg
    55801 aaagcagaca acaatgagtg aaatcaaaac cgacgacccc aaacgcggca tcaaactcag
    55861 aggcgcggac aaaaccgccc gcatccccat caaagtcgtc ccccttcagg aaaaattaaa
    55921 aaagcccgaa tggatacgcg ccaaacttcc atcgcgcaaa ttctttgaaa tcaaagacat
    55981 tttgcgcgaa caaaaaatgc acaccgtttg cgaggaagcc tcctgcccca acatcggcga
    56041 atgcttcagc aaaggcacgg cgaccttcat gattatgggc gacatctgca cccgccgctg
    56101 cccgttctgc gacgtgggac acggccgccc gaatatgctc gaccccgacg aaccgaaaaa
    56161 cctcgccgaa tccgtcaaag ccatgaacct gcgttacgtc gtcatcacct ccgtcgaccg
    56221 cgacgacctg cgcgacggcg gcgcacagca tttcgccgac tgcatcaaag ccatccgcga
    56281 aaccagcccg aacaccaaaa tcgaaatcct cgtccccgac ttccgaggac gcttggacat
    56341 cgcactcaaa atccttgccg aaaccccgcc cgacgtgatg aaccacaacc tagaaaccca
    56401 tccgagcctg tacagaaaag cccgtcccgg tgccaattat caacattctt tagacttatt
    56461 aaaacgttat aaagaaatga tgccgcacat cccgaccaaa tccggcatca tggtcggctt
    56521 gggcgaaaca gacgaagacg tgcgtgaaat tatgcgcgat atgcgggcgc acaatatcga
    56581 aatgattacc atcggacagt acctccagcc ttcagacgga cacctgcccg tcctgcgcta
    56641 cgttacgccc gagcagttca aaatctttga aaaagaagca tacgaactgg gcttcagcaa
    56701 tgccgccatc ggcgcgatgg tacgttccag ctaccacgcc gacgaacagg ctaccgaagc
    56761 cttacgcgaa agccacggcg gttgcgggca tcattaaacc caaaataccg ttccgaagta
    56821 aaaaataatt tcctacgctg ctgtctgccg cgttgtttaa tcagctttaa ttgtctatgc
    56881 cgtctgaaag cccctcagac ggcataattt attcccaaaa tccgataatc tcaaaagaat
    56941 ctgtcggtta atgagaacga ttcattataa attttgataa aaaaccgtac cgtatttgct
    57001 tttagctatg gttaacaagt gtaaatgttc tttatggata atatggatta ttagttttaa
    57061 cagcacaaaa aaccgataaa aaacagcata ctgatttgga aggcatcggg gaatacgccc
    57121 tatttctttt gataattgtt tgtattttaa atagaaaatt tgtcatgccg acagcttttg
    57181 catacaatgc acgcattccg aacagtgcta catccactgt ttaactacac gaaacccaaa
    57241 ttaagaaaag agaaatatta tgcaaggcaa tcaagcagtt ttagattaca tgaacgaatt
    57301 gctgtctggc gagctggcgg cacgcgacca atactttatc cactcccgcc tctactccga
    57361 atggggctac accaaacttt ttgaacgtct caaccacgag atggaagaag aaaccacaca
    57421 cgccgaagac ttcatccgcc gcatcctgat gctgggcggc acgccgaaaa tggcacgcgc
    57481 cgaactgaat atcggcacgg acgtggtttc ctgcctcaaa gccgacctgc aaaccgaata
    57541 tgaagtacgt gatgcgttga aaaaaggcat caaactgtgc gaagaggctc aagactatgt
    57601 tacgcgcgac ctgatggttg cccaactgaa agataccgaa gaagaccacg cccactggct
    57661 ggaacagcag cttcgcctga tcgagttaat tggcgaaggc aactactacc aaagccaact
    57721 gtaatccgta ttcggaataa aaggagtccg tatgaaaggc gaccgtctgg ttatccgcga
    57781 gctaaacaaa aacttaggct tgctgctggt aaccatcaac caatatttcc ttcacgcccg
    57841 tattttgaaa aactggggct ttgaagaact gggcgaacat ttcttcaaac agtccatcgt
    57901 tgaaatgaaa gctgccgacg atttgatcga gcgcattctg ttcctcgaag gtctgccgaa
    57961 cctgcaagaa ctgggcaagc ttctgattgg cgagtccacc gaagaaatca tcgcctgcga
    58021 tttgaccaaa gaacaggaaa aacacgaagc cctgcttgcc gccatcgcca cagcagaagc
    58081 gcaacaggat tacgtcagcc gtgatttgtt ggaaaaacaa aaagacacca acgaagaaca
    58141 catcgactgg cttgaaaccc agcaggaact gatcggcaaa attggtttgc cgaactacct
    58201 gcaaacagcg gcgcaagagg actaaaacac aaaccactgc caaatatagc agtcccctgc
    58261 atcatcagac ggcatatccg tataaacggg tatgccgttt ttctttgccg gtttgcgaat
    58321 caaatctaaa ttgatttgaa tcaatactcg ataacggttt ttgtttgata ataccgatat
    58381 gaaatctaga ttgcttgttt gctgtttccc aatctgtctt gattttacct ctttcctctt
    58441 gatgtgtgtg tgtttgggtg tggctgccgc cacccctttt ttttggcttt tatgtgaagt
    58501 aaaatccgta acagcaaatg cttaacttta accatttatc tggaagcaaa tgatgggcaa
    58561 caaattgacc ccgcctgcca aactgcctga cgaacaggat ttgcgggcgg tattggcata
    58621 caatatgcgg cttttccgcg tgaacaaggg ttggtcgcaa gaagaattgg cgcggcaatg
    58681 cggtttggac aggacttatg tgtcggcagt cgagcgcaaa cgctggaaca tcgccctgtc
    58741 gaatatcgaa aaaatggcgg cggctttggg cgtggcggcg tatcagttgc tgctgccgcc
    58801 gcaggaacgg ttgaagctga tgaccaattc cgccgatacc cgacaaatgc cgtctgaaag
    58861 cggtatttga ccgccgaacc atccacctcc cttttcccgc caatcgaaag aataaaaatg
    58921 cctgcaaacc tgtcttcagc actggaaacc ttcaaacggc agcgcgatgc cgccgaagcg
    58981 cattatttga aagccaaccg cgtgtcggta tttttcaggg aatatacggc ggcagtcgaa
    59041 accttactgg cggcattgtg ggtagaacat tttcaaaaca gcgcgttatg cctgatggcg
    59101 gtgggcggct tcgggcgcgg cgaactgtat ccctgttcgg atgtggattt ggcggttgtc
    59161 tcccctgccc cgctttcaga cggcattcag gaacagattg cccggtttgt tcaaaccctg
    59221 tgggactgca aactgatgcc gtctgtaaaa agcggcagcg ttgatgaact atgtgaaagc
    59281 gtgcgcaatg atattacggg ggacacagcg tttttagagg ctaggttttt gtttggcaac
    59341 cgccaaacgg tggataaact ggcggaaaaa atgaacgcgc agcgcaatgt ggcggcgttt
    59401 gtcgaggcaa aactggtgga gatggaacac cgccacgcca aatcgcaagg ttcgggggca
    59461 gtattggagc cgaatatcaa aagctgtccg ggcggtctgc gcgacatcca caccctgctt
    59521 tggatagcga aggcgcaagg cttggcgacc gacctgcccg acctgctcaa acagcggatt
    59581 ttgacgcgtg ccgaagccgg tatgctttcg cacggctacc gccgcctcgc ccacatccgc
    59641 atccatctgc atttaaacgc caatcgcgcc gaagaccgcc tgctgttcga tttgcagccg
    59701 caagtcgccg aaagcatggg ttatgaaggc ttgaacctcc gccgccaaag cgaagaactg
    59761 atgcgcgtgt tttaccgcgc gattaaaacc gtcaaacaac tgggcggcat cctcacgcct
    59821 atgctgcaaa gccgcgtttc ctccaccccg ttgcgcgtta ccctgcggat tgacgacgac
    59881 tacatccaag tcaacaacca aatcgccgcg cggcacaccg atattttttt cagacggccc
    59941 gaacacattt tcaaaatcgt cgaaatcatg cagcagcgca acgacattac cgcgctcgaa
    60001 ccgcaaaccc tgcgcgcctg gtggggcgcg acgcgcaaaa tcaaccgcag cttctaccaa
    60061 aatcccgaaa accgccgccg cttcgccggt tttttccgca acggcaacgg gctgacccag
    60121 accctgcgct ttctcaacct ctacggcgtg ttgggccgct acctgcccgc gtgggaaaaa
    60181 atcatcggcc tgctccaaca cgacctgttc cacatctatc ccgtggacga ccacatcctc
    60241 accgtcgtcc gcaacgtccg ccgccttgcc ttggatatgc acagccacga gctgccctac
    60301 gcctctgcac tgatgcagtc ctttgaaaaa caagacatcc tctaccttgc cgcctttttc
    60361 catgacatcg ccaaaggacg cggcggcgac catgccatac aaggcatcgc agacgcgcgc
    60421 caatttgccg ctgaccactt cctgaccgga gaagaaagcg acctgctcgc ttggctggtc
    60481 gaaaaccacc tgctgatgtc tgccgtcgcc caaaaagaag acatccaaga ccccgacgta
    60541 ctcgatgctt tctgcaaacg cgtccaaacc cacgaacgcc tcagcgcgct ctaccttctg
    60601 accatttccg acatacgcgg taccaatccc aagctgtgga acgcatggcg cgccagcctg
    60661 ctggaaagcc tcttccatgc cgccggacgc taccttacag gcaacggcgg caacccgcac
    60721 accctcttcg gccgccgccg gcaggaagcc gccgacttac tcacccgcgc cgccgtcccc
    60781 gaaaaacagc agaaaaaact atggaacgcg ctcggttccg cctacttcgc ccgccaccag
    60841 tcccgcgaaa tcctgtggca cgccgccaac ctcgtacacg attttgaaac ccccatcgtc
    60901 cgcagccgca tcctgcccca aagcgacagc ttccaagtga tggtctttat gcccaacggc
    60961 ccgcgcctgt tcgcccgcct ctgccgcatc ttcagccgcc acggcttcga cattctcgcc
    61021 gcccgcgcct tcatcaccga acacgactac atcctcgaca ccttcatcgt gcaaatcccc
    61081 tcgcagcacg ctcccgaaga ctaccccgac attcaaagcg cgctcgaagc cgaactcaac
    61141 agctttatcc acggacacac cgttgccgaa atctccagcc atagccgccg catcagccgc
    61201 cgcagccgct atatgccgat cgcgccaagc atcaccatca cccccgaaga agactacccc
    61261 gattggtact ccgtcgaaat caccgccgtc aaccgcccct tcctgctcgc cgatatggcg
    61321 gaagtctttt tcgcccacaa cgtcagcctg cgctatgcca aaatctccac actggatgaa
    61381 cgcgccgaag acagttttac cgtttttagc ctagacctga aaaacccaaa aatccagtcc
    61441 tcattgaagc agacgctgct ggaacaatta tcataacgcc cgccttcaga cggcattccg
    61501 ccgccacgcc gtatgccgtc tgaaagcggg ggatattgta aataatttat taatataagg
    61561 atttatatga atattattat ggactcaaca agaaaatttg ggattttatg ggaagaaaac
    61621 tctgaatgta atggttttat ttatggaaaa attcagataa taataggaga gaatatatat
    61681 cctaagatat gcccatatgg atattttacg ctaaatgcag tttttaatag tttgaagtca
    61741 tcctttgaag agaagtatta tgcaggtgga aacaatggtt tagattttgg agagcaacta
    61801 tttgatatag ataaatataa ttctctggaa ttatgcaata tattttctat tgatactaca
    61861 tatatgagtg gagggggtaa ttgtgaaata gattgtttag tattagaaat gggatattct
    61921 ggtgaggaag agagactttt ttatagtttt gacaatggga aaaactttaa agaaatcagg
    61981 tataagaaag gtacagttga atctgttatt tttcaattga atctataata tatggggctg
    62041 taactagatt agcagatatg ttaccctcga aatattaaga taatatactg aaaattaaag
    62101 gaaaaaataa ataaagaact actccgtttt tttgtgctgg aagttaccgc ccgatatagg
    62161 gcttcaataa ctgagccact taccaaaaat tagaaaaaag cttttcctga aattgaaaga
    62221 acgggagcaa cagtggtcgg caaaggaaaa ccgggctatt caaaggggac caaaattaaa
    62281 cctgataaac tgtcaagccg ccggtaacgt gctataatgc cgtgcatctt gcacaaactg
    62341 aaagaccgag cattatgcgt atcgtagaaa aagcctatac tttcgacgat gttttgttgg
    62401 ttcccgcaca ttcgaccgtg ctgccgcgag acgttaaact tcaaaccaag ctcacccgcg
    62461 aaatcacact caacctcccc ctgctttccg ctgcgatgga cactgttacc gaggcgcgcc
    62521 tcgccatttc gatggcacag gaaggcggca tcggcatcat ccataaaaac atgccgcccg
    62581 aaatgcaggc gcgcgccgtt tccaaagtga aacgccacga aagcggcgtg gtcaaagacc
    62641 ccgtaaccgt tgcaccgacg acgctcatcc gcgaagtctt ggaaatgcgt gcgcagcgca
    62701 aacgcaaaat gtccggcctg cccgtcgttg aaaacggcaa agtcgtcggc atcgtaacca
    62761 accgcgacct gcgttttgaa aaccgcgtcg atttgcccgt ttccgccatt atgaccccgc
    62821 gcgaacgttt ggttaccgtc cccgaaggca caagcataga cgaagcgcgc gaactgatgc
    62881 acacgcacaa agtcgagcgc gttttggttc tgaacgaaaa agacgaactc aaaggtctga
    62941 ttaccgttaa agatatttta aaaaccaccg agtttcccaa cgccaacaaa gactccgaag
    63001 gccgtctgcg cgtcggtgcg gcagtcggca ccggcggcga taccgaagag cgcgtcaaag
    63061 ccttggtcga agccggcgtg gacgtgattg tcgtcgatac tgcccacggg cacagccaag
    63121 gcgtgattga ccgcgtgaaa tgggtgaaag aaacctatcc gcacatccaa gtcatcggcg
    63181 gcaacatcgc cactgccaaa gccgcattgg atttggtcgc cgccggtgcg gatgccgtca
    63241 aagtcggtat cggcccggga tcgatttgca ccacccgtat cgtggcaggc gtgggcgtgc
    63301 cgcaactgac cgccatccac aacgttgccg aagccctcaa aggcacaggc gttcccctga
    63361 ttgccgacgg cggcatccgc ttctccggcg acatcgccaa agccctcgcc gcaggcgcgt
    63421 acagcgtcat gctcggcggt atgtttgccg gcacggaaga agcgccgggc gaaatcgaac
    63481 tctatcaagg ccgctcgtac aaatcctatc gcggtatggg ttcattgggc gcgatgagcc
    63541 aaggttctgc cgaccgctac ttccaagaca aaaccgacag caccgacaaa tacgtccccg
    63601 aaggcatcga aggccgcgtt ccttacaaag gcccgattgt gaacatcatc caccagctga
    63661 ccggcggtct gcgttccagt atgggttact tgggttgcgc caatattgcc gaaatgcacg
    63721 aaaaagccga atttgtggaa atcacttccg caggtatgag cgaatcgcac gttcacgacg
    63781 ttcaaatcac taaagaagca ccgaactacc accgctgatt tgaacagcct tttcaaggca
    63841 aaatgccgtc tgaaacctga ttttcgggtt tcagacggca ttttttgtcc gttcaaggca
    63901 agccgcacgg gctgattgcg cggacgggca aagccattcg gacggacacg ccgaaagaat
    63961 gaaaatgccg tctgaacgcc gtttgcgccc cgtctgccga ataccgccgg cctttaaaac
    64021 ggcggtggaa ataaacgcaa tct
//
LOCUS       DBBZXW010000003        52554 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.003, whole genome shotgun sequence.
ACCESSION   DBBZXW010000003 DBBZXW010000000
VERSION     DBBZXW010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 52554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 52554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..52554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.003"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="ACJJD2_000167"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="ACJJD2_000167"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7578796.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAPAAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAK
                     SRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAATTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1909..2346)
                     /locus_tag="ACJJD2_000168"
     CDS             complement(1909..2346)
                     /locus_tag="ACJJD2_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578797.1"
                     /translation="MGNFLYRGISCQQDEQNNGQLKPKGNKAEVAIRYDGKFKYDGKA
                     THGPSVKNAVYAHQIETGLYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQ
                     YSIFEYEVEHPENPNEKEVTIRAEDCGCIPEEVIIAKELIEIN"
     gene            complement(2440..4038)
                     /gene="aceF"
                     /locus_tag="ACJJD2_000169"
     CDS             complement(2440..4038)
                     /gene="aceF"
                     /locus_tag="ACJJD2_000169"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HGG7578798.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGASAAEAAPAVAAEAQPAPAAAPV
                     AAGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGV
                     VKAVFLKVGDKVSEGSAIIEVETAGSVAAAPAQAAQAAAPAPTAAAAPAAAPAPSAPA
                     AAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGA
                     AKPAAAGASLGSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTV
                     HEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLML
                     KNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACF
                     TISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVI
                     DGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(4188..6851)
                     /gene="aceE"
                     /locus_tag="ACJJD2_000170"
     CDS             complement(4188..6851)
                     /gene="aceE"
                     /locus_tag="ACJJD2_000170"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HGG7578799.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7545..9257
                     /locus_tag="ACJJD2_000171"
     CDS             7545..9257
                     /locus_tag="ACJJD2_000171"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HGG7578800.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANVELAPTLPLKGERTAAQAELVKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASSAAIVEQFGANGG
                     SLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQVMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     SLNG"
     gene            9320..9976
                     /locus_tag="ACJJD2_000172"
     CDS             9320..9976
                     /locus_tag="ACJJD2_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HGG7578801.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGMGEGEDILGCVAGYGVGLDLTA
                     RDIQCHLKAQGLPWLKAKGFRHSACVSDFAAADRIGNPEKVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9986..10441)
                     /gene="ruvX"
                     /locus_tag="ACJJD2_000173"
     CDS             complement(9986..10441)
                     /gene="ruvX"
                     /locus_tag="ACJJD2_000173"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HGG7578802.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSHKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(10434..10982)
                     /locus_tag="ACJJD2_000174"
     CDS             complement(10434..10982)
                     /locus_tag="ACJJD2_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HGG7578803.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10984..11544)
                     /locus_tag="ACJJD2_000175"
     CDS             complement(10984..11544)
                     /locus_tag="ACJJD2_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HGG7578804.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11872..13677
                     /locus_tag="ACJJD2_000176"
     CDS             11872..13677
                     /locus_tag="ACJJD2_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG7578805.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSVRKGHEGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13797..15281
                     /locus_tag="ACJJD2_000177"
     CDS             13797..15281
                     /locus_tag="ACJJD2_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HGG7578806.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELLKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
     gene            15610..17637
                     /gene="uvrB"
                     /locus_tag="ACJJD2_000178"
     CDS             15610..17637
                     /gene="uvrB"
                     /locus_tag="ACJJD2_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HGG7578807.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIADLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDTIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKESLLFGAE"
     gene            17673..18557
                     /locus_tag="ACJJD2_000179"
     CDS             17673..18557
                     /locus_tag="ACJJD2_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578808.1"
                     /translation="MTSIILELQSLAANPNSDVEELVSKTLMVARKLKINELTEWCNN
                     ELQGYSSKNLPKYRIFYGELKAFNPYRGDVPFMLPDELRERVTRVEYTSSISEIRNLL
                     KTKNNNFIRILSSKEKQFLMNLQDTPFPLEPKIIIYPINLMNIQSKVRQLILAWALRL
                     EEEGILGDGIQFTKSKQEKAMSNQFNIQNMQGFIGDIFGGNVQQNIQDGIHIEKENFN
                     KLANFLAKNGIPSAELEDLRNALIEDGQPTDKKFGSKVSAWIGNIITKASTGAIDVSV
                     GTIAGILTNAISKYYGLM"
     gene            18784..19275
                     /locus_tag="ACJJD2_000180"
     CDS             18784..19275
                     /locus_tag="ACJJD2_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7578809.1"
                     /translation="MKYRRFYRNGGTYFFTVVANKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGKLRLWQKRFWEH
                     TIRDEADFACHFDYLHFNPVKHGYVGQISDWRFSTFHRYVKQGIYPHNWGGGNADFSI
                     EYD"
     gene            19347..19508
                     /locus_tag="ACJJD2_000181"
     CDS             19347..19508
                     /locus_tag="ACJJD2_000181"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578810.1"
                     /translation="MRWLNLKNSTSVHNTQGIRTKEAVEQGLRGNNRPEKGIGNRWNY
                     DGFIKELAK"
     gene            19558..19842
                     /locus_tag="ACJJD2_000182"
     CDS             19558..19842
                     /locus_tag="ACJJD2_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578811.1"
                     /translation="MKVITITLFTSCILSGCYGLEYGMSGGIPHDDWARGSHVSQAKA
                     DAAWKECSDKYMRNGGSGLVEQCMNDKGLIRLSEIRRRQKRAETQRAVIK"
     gene            complement(19967..20683)
                     /gene="trmB"
                     /locus_tag="ACJJD2_000183"
     CDS             complement(19967..20683)
                     /gene="trmB"
                     /locus_tag="ACJJD2_000183"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HGG7578812.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTSAQQRAIDTLWG
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(20805..22208)
                     /locus_tag="ACJJD2_000184"
     CDS             complement(20805..22208)
                     /locus_tag="ACJJD2_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7578813.1"
                     /translation="MNNPDLLYHQALERLSQEQYDFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPHQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGARPETLIPLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTTAKNNNPHGQYLLAQYCQYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDEAVYRFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAAAAERHP
                     EGLRILGDICRYSLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPNQYGGIK
                     DSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDNEKACRYLQEAINSGH
                     EQKSFLQELLQQWQNAV"
     gene            complement(22327..24213)
                     /gene="uvrC"
                     /locus_tag="ACJJD2_000185"
     CDS             complement(22327..24213)
                     /gene="uvrC"
                     /locus_tag="ACJJD2_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HGG7578814.1"
                     /translation="MPSETVFQVIDMNKETRFPEHFDIPLFLKNLPNLPGVYRFFNES
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSESEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCSAPCVGHISEEDYHDSVREASTFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPMPDALKEALESEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLMRRYGKMQEAEANGETVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVVAASKEDLEQVEGISKALAETIY
                     EHLH"
     gene            complement(24277..26439)
                     /locus_tag="ACJJD2_000186"
     CDS             complement(24277..26439)
                     /locus_tag="ACJJD2_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG7578815.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLTIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRNGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMD
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYCVPDSGFDEDDLYRI
                     AAAVEQNATHPLARAIVSAAQTRSLEIPAAQNAQTVVGAGIAAEVEDVGLVKAGKAEF
                     AELTLPEFSDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALLVSQATLKNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            26578..27528
                     /gene="trxB"
                     /locus_tag="ACJJD2_000187"
     CDS             26578..27528
                     /gene="trxB"
                     /locus_tag="ACJJD2_000187"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HGG7578816.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            27684..28052
                     /gene="rpsF"
                     /locus_tag="ACJJD2_000188"
     CDS             27684..28052
                     /gene="rpsF"
                     /locus_tag="ACJJD2_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HGG7578817.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAAAQ"
     gene            28053..28355
                     /gene="priB"
                     /locus_tag="ACJJD2_000189"
     CDS             28053..28355
                     /gene="priB"
                     /locus_tag="ACJJD2_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HGG7578818.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            28362..28592
                     /gene="rpsR"
                     /locus_tag="ACJJD2_000190"
     CDS             28362..28592
                     /gene="rpsR"
                     /locus_tag="ACJJD2_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HGG7578819.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            28609..29061
                     /gene="rplI"
                     /locus_tag="ACJJD2_000191"
     CDS             28609..29061
                     /gene="rplI"
                     /locus_tag="ACJJD2_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HGG7578820.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADAQARQEKLDGQTITVAQKAGVDGRLFGSVTNADIAAAI
                     VATGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            complement(29254..30060)
                     /locus_tag="ACJJD2_000192"
     CDS             complement(29254..30060)
                     /locus_tag="ACJJD2_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7578821.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(30061..30807)
                     /gene="pssA"
                     /locus_tag="ACJJD2_000193"
     CDS             complement(30061..30807)
                     /gene="pssA"
                     /locus_tag="ACJJD2_000193"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HGG7578822.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(30881..31285)
                     /locus_tag="ACJJD2_000194"
     CDS             complement(30881..31285)
                     /locus_tag="ACJJD2_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578823.1"
                     /translation="MANRFQQRKSAYRRLSGKPLFSDGIAANLCGGRKTLSYNLSRFK
                     ISIRSEMQKISFNLLKPANSPKIGKRRPGLNGAPHIPMPSPRYLPASPEMPGNNIHPA
                     KIRNNTPGGRQSQTAPQSIRHQKNKPPPRASS"
     gene            31391..31873
                     /locus_tag="ACJJD2_000195"
     CDS             31391..31873
                     /locus_tag="ACJJD2_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HGG7578824.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFSELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGALR
                     VDNAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(31925..33136)
                     /locus_tag="ACJJD2_000196"
     CDS             complement(31925..33136)
                     /locus_tag="ACJJD2_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HGG7578825.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSIGEWGLPSTMFGLFAAGFMYFVFAVLIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            33359..35797
                     /locus_tag="ACJJD2_000197"
     CDS             33359..35797
                     /locus_tag="ACJJD2_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG7578826.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDEPEPLEKLPLIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            36005..37315
                     /gene="tig"
                     /locus_tag="ACJJD2_000198"
     CDS             36005..37315
                     /gene="tig"
                     /locus_tag="ACJJD2_000198"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HGG7578827.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQ
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAMFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            37411..38025
                     /gene="clpP"
                     /locus_tag="ACJJD2_000199"
     CDS             37411..38025
                     /gene="clpP"
                     /locus_tag="ACJJD2_000199"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HGG7578828.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(38082..39347)
                     /gene="ispG"
                     /locus_tag="ACJJD2_000200"
                     /gene_synonym="gcpE"
     CDS             complement(38082..39347)
                     /gene="ispG"
                     /locus_tag="ACJJD2_000200"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HGG7578829.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLAFSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(39363..40124)
                     /gene="pilW"
                     /locus_tag="ACJJD2_000201"
     CDS             complement(39363..40124)
                     /gene="pilW"
                     /locus_tag="ACJJD2_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HGG7578830.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(40127..41221)
                     /gene="rlmN"
                     /locus_tag="ACJJD2_000202"
     CDS             complement(40127..41221)
                     /gene="rlmN"
                     /locus_tag="ACJJD2_000202"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HGG7578831.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(41365..41790)
                     /gene="ndk"
                     /locus_tag="ACJJD2_000203"
     CDS             complement(41365..41790)
                     /gene="ndk"
                     /locus_tag="ACJJD2_000203"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HGG7578832.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(41849..43000)
                     /gene="zapE"
                     /locus_tag="ACJJD2_000204"
     CDS             complement(41849..43000)
                     /gene="zapE"
                     /locus_tag="ACJJD2_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HGG7578833.1"
                     /translation="MSSRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHRRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
     gene            complement(43175..43284)
                     /locus_tag="ACJJD2_000205"
                     /pseudo
     CDS             complement(43175..43284)
                     /locus_tag="ACJJD2_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(43391..44218)
                     /gene="fghA"
                     /locus_tag="ACJJD2_000206"
     CDS             complement(43391..44218)
                     /gene="fghA"
                     /locus_tag="ACJJD2_000206"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HGG7578834.1"
                     /translation="MKLIEQHQIFGGLQQVWAHYAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWVTNYQMYDYILNELPSLIEEKFPTNGKRSIMGHSMGGHGALVLALRNRE
                     RYQSVSAFSPILSPSLVPWGEKAFSAYLGKNREKWQQYDADSLIRQGCKVQGMRIDQG
                     LEDEFLPTQLRTQDFIETCRAANQPADVRFHKGYDHSYYFIAGFIGEHIAYHAAFLK"
     gene            complement(44227..45336)
                     /locus_tag="ACJJD2_000207"
     CDS             complement(44227..45336)
                     /locus_tag="ACJJD2_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HGG7578835.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPAKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFDLMHEGKSIRAVIHY"
     gene            45484..45891
                     /locus_tag="ACJJD2_000208"
     CDS             45484..45891
                     /locus_tag="ACJJD2_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HGG7578836.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            complement(46242..46556)
                     /locus_tag="ACJJD2_000209"
     CDS             complement(46242..46556)
                     /locus_tag="ACJJD2_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HGG7578837.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(46567..48252)
                     /gene="rpsA"
                     /locus_tag="ACJJD2_000210"
     CDS             complement(46567..48252)
                     /gene="rpsA"
                     /locus_tag="ACJJD2_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HGG7578838.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            complement(48408..49064)
                     /gene="cmk"
                     /locus_tag="ACJJD2_000211"
     CDS             complement(48408..49064)
                     /gene="cmk"
                     /locus_tag="ACJJD2_000211"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HGG7578839.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            complement(49308..50623)
                     /locus_tag="ACJJD2_000212"
                     /pseudo
     CDS             complement(49308..50623)
                     /locus_tag="ACJJD2_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519747.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            complement(51149..51841)
                     /locus_tag="ACJJD2_000213"
     CDS             complement(51149..51841)
                     /locus_tag="ACJJD2_000213"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HGG7578840.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPAGETLCETLKNGVLLHD
                     ENETVYAADAVLESPSALLLTITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
     gene            complement(51909..>52554)
                     /locus_tag="ACJJD2_000214"
     CDS             complement(51909..>52554)
                     /locus_tag="ACJJD2_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7578841.1"
                     /translation="EPALATAAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELM
                     QLVARNNLRRQAEETISAVIGTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAAD
                     GEAEISPLHASIHRVVEGDTLFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAA
                     PAQTRIEKVSYTARKGDTFKSIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
BASE COUNT        12741 a        12780 c        14080 g        12953 t
ORIGIN      
        1 ccggaaaaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgccgc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacgacc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggaggctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcagcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gttgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac gttggtacgc atttgtttgt ccacttcgat gaagccgcga tcggttacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttcg gtgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttca ccaagtcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgaggccgat aatgccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggttacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagtgg
     1141 ctgcctgttc gtacgcgtcg ccggcagtca gcgacacttc caagtggtgc gggtctaaga
     1201 attgcccgtc gccttggata acgtccactt tacggctttt cgccatacct gccaaaccgc
     1261 ccgtgaggcg ggaaactacg ccgtctttgt aggcgcgaag catatcgatg tcgagttccg
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacaa ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaagttt
     1441 tgtaacgttc gacgatggcg actttcaagc cttcatcggc agcggcaaat gcagcggagt
     1501 aaccgccggg accgccaccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagca ggagcagcag ctttaggggc ttcttgcgcc ggggcggcag
     1621 caggtgcttc agctttggga gcggctgccg tgccttcagc ttcaacgacg acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccagggt aatcagggta tcgtcaacgg
     1801 cgatggtgtc tcctacgttc acttcaactg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaaagcca ttatattgac ctttcaactt agttaatttc
     1921 tatcaactct ttagcaataa tcacttcttc aggaatacag ccacaatctt cagctctgat
     1981 tgttacttcc ttctcatttg ggttttctgg atgttcaacc tcatattcaa aaatagaata
     2041 ttgaccaaac aaatccctat ttaaaacata tatatagcca ttttcgatgc cggaacttgt
     2101 tgcaaatttc ttggcaattt ccttgtctgt tgtcgtagat atataacatc cgtcatatag
     2161 acctgtttca atttgatggg cgtaaactgc attcttcaca cttggaccat gtgtagcttt
     2221 accatcatat ttaaacttac catcataacg aattgcaact tcagctttat tacctttagg
     2281 ttttaactgt ccattatttt gctcatcttg ttggcaacta atgcctctat ataagaaatt
     2341 tcccataagt tattaattta aaggttgaat ttaacaccat tactcatcaa tctcaagcaa
     2401 tccaaacatt atcagactgc ttgagaggga tgttttattt tataaggtaa tgcggcggaa
     2461 gtctttcaac agcttcgcca agaatacggt gaagcgcata ccggccgcac cgtcgatgac
     2521 gcggtggtcg aaggacaggc tcaacgggca catcaggcgc ggggcaaact ctttgccgtt
     2581 ccaaaccggt ttgatttggg atttgcacac gcccaagatg gcgacttcgg gagcgttcac
     2641 aatcggcgtg aagcctgtgc cgccgatgcc gcccaagctg gaaatggtaa agcatgcgcc
     2701 ttgcatttct tgtggtttga gcttgccttc gcgggctttt ttggacaatt ctgtcagctc
     2761 ttggctgatt tgtttcaagc ctttttgatc cacgtctttg atgacgggaa caaccaagcc
     2821 gttcggcgta tcggctgcga aaccgatgtt gaagtagttt ttcagcatca ggttgtcgcc
     2881 gtccagagaa gcgttgaatt cggggaaggc tttcagcgcg gaaacggagg ctttgatgat
     2941 gaacgccaga ggagacagtt tcacgccttc gcgttcccat tctttgttca gttgtttgcg
     3001 gaattcttcc agctcggtca tatctgcttc ttcgtgtacg gtaacgtggg gaatcaccac
     3061 ccagttgcga gacaggtttt gaccggagat tttcttaatg cgggacaatt ctttaacttc
     3121 gacattgccg aatttggaga agtccacttt aggccacggc agcaagtcca gaccgctgcc
     3181 caaagatgcg ccggctgcgg caggttttgc cgcgccaccc tgcattacgg atttcacaaa
     3241 ggctttgatg tcgtcgccca cgatacggcc tttcaagccg gtacctttga cttggcccaa
     3301 atccacgccc aattcgcgcg ccagtttgcg tgcggaaggg ccggcgtgtg ctttggcgaa
     3361 agcggcctcg tcgattttgg cagcggcagg tgcagaaggt gcaggcgcgg cggcgggtgc
     3421 ggcggcagca gtcggagccg gtgcggcagc ttgagcggct tgagcaggag ctgctgcgac
     3481 agagccggcg gtttccactt cgataatggc agagccttcg gacactttgt cgccgacttt
     3541 taagaatacg gctttaacga cgccggcagc ggtacaaggt acgtccattg tcgctttgtc
     3601 ggtttccaaa gtaatcagcg tgtcgtcttc ggcaacggtg tcgcccactt tgatttcaac
     3661 ggcgattaca tccacatcgg tatgaccgcc gatatcggga acggctactt gaacggttgc
     3721 accgcctgcg gcaacgggtg cggcggcagg tgcaggttgt gcttcagcgg caacagccgg
     3781 agcggcttcg gcggcggagg caccggtttc aacggtcaaa attacgccgc cttcggagat
     3841 tttgtcgccg actttgactt ttacttcttt cacgacaccg gcagcatcgg caggcacatc
     3901 catcgtggct ttgtcggttt ccagtgtaat cagggtgtcg tcaacggcga tggtgtcgcc
     3961 cgctttaact tctacggcga tgatgtcgac gttttcgtga ccgccgatat cggggacttt
     4021 gatttctacg atactcattt gagttccttt aatcttgttc agttggatgc cgtctgaaag
     4081 ctgcttcagg cggcatcggt acggtttgtc tgctcaaacc attcgggcat tcggttttca
     4141 gacggcctga tgtcggaatg gggcaaacag gccgtctgaa acatcaatca gcgtttccag
     4201 ctaggagctg aatcggcttt gatgccgtat ttctcaatgg cttgttgaac ggtttctttg
     4261 ctgactttgc cttgttccgc caatgcggcc aatgcggcca cggcaacgtt gtagcgatcc
     4321 acttcaaaga agcggcgcag gttggcgcgg ctgtcggagc ggccgaagcc gtcagtaccc
     4381 aagacgtggt agtcgttcgg gatgtaggcg cggatacggt cagcatagct gcggatatag
     4441 tcggtagcgg caataaccgg accgtcatga ccttgcaatt tggaagtaac gaaaggtact
     4501 ttttcggctt ccagcggatg caggcggttg aagcgttcta cctcgacagc gtcgcggtgc
     4561 agcaggttga aggatgggca agaccaaatg tctgcttcca cgccgaagtc ggctttcagc
     4621 agttcggcac cggcaatcac ttcttgcaaa atcgtaccgg aacccatcag ttggactttc
     4681 ttgtcgcctt tgccgccggc tttcagcagg tacatacctt tcaagatgtc ttgttccgca
     4741 ccttcgggca tatccggatg ggtgtagttc tcgttcatca gggtgatgta gtagaacacg
     4801 tcttcattat tggcatacat acggcgcaga ccgtcttgta cgatgacggc gacttcgtat
     4861 tggaaagtcg ggtcataaga tacgcagttc ggaatcaggt cggcctggat gtggctgtgg
     4921 ccgtcttcgt gttgcaggcc ttcgccgttc agcgtcgtac ggccggcagt accgcccagc
     4981 aggaagccgc gcgcgtgcat atcgcccgcc gcccaagcca agtcgccgat acgttggaaa
     5041 ccgaacatag aatagtaaat gtagaacgga atcatggcga agttgctgtt ggcgtagctg
     5101 gttgcagccg caatccagtc ggccatcgcg cccggttcgt taataccttc ttgcaagatt
     5161 tgaccgtcaa cggattcttt atagaacatc agttggtctt tgtcttgagg ggtatattgc
     5221 tgacctttcg gattccaaat accgtattgg cggaacatac cttccatgcc gaaagtacgg
     5281 ctttcgtcgg gaacgatagg tacgacgcgt ttgccgattt ttttgtcttt cagcaaagtg
     5341 gacaggatgc ggacgaatgc catcgtggtc gagaactcgc gttcaccgct ggatttgagt
     5401 tgtgcgtcga atgctgacag ctcgggcact tccaatactt cctgcgtcgg tttgcgttgc
     5461 ggcaggtagc cgcccaaagc atcgcggcgt gcgtgcaggt atttgtattc ttccgtatcg
     5521 ggggcaaaag tcaggtaagg cagatcgccg ctttcgattt gttcgtcggt aaccggaatg
     5581 tcaaagcggt cgcggaattg tttcagggac gctttgtcca tttttttggc ttggtgggca
     5641 acgttctgac cttcgccgga tgcgcccata ccgtaacctt taatggtttt cgccaagatg
     5701 acggtaggtt tgccgtcggc atggttcgct gcgcggtcgt aggcgttgta cactttttgc
     5761 gggtcgtggc cgccgcggtt caatgcccag agttgctcat cggtcatatc ggcaaccaat
     5821 gctttcagtt cgggcgtatt gaagaagtgt tcgcgcacat acgcgccgtc tttggatttg
     5881 taagtttggt agtcgccgtc caaacattct tccatacgtt ggcgcaggat accgtctttg
     5941 tctttcgcca agaggcggtc ccagcggcgg ccccaaatga ctttgacgac attccagccg
     6001 gcgccggcaa agttgccttc caattcttgg atgattttgc cgttgccgcg taccggaccg
     6061 tccaagcgtt gcagattgca gttgatgacg aaaatcaggt tgtccaagcc ttcgcgtgca
     6121 gccagtgcga ttgcaccttg agattcgggt tcgtccattt cgccgtcgcc gcagaaacac
     6181 catactttac ggcctttggt ttttgccaaa ccacgcgatt ccaagtattt caggaaacgc
     6241 gcctgataaa tcgccatgat gggccccaag cccatggata cggtcgggaa ctgccaaaag
     6301 tcgggcaaga ggtgggggtg cggataggaa ggcagaccgt gtccgtccac ttcttggcgg
     6361 aagttgttca gctggtcttc ggtcagacgg ccctcgacga atgcgcgtgc atagatgccc
     6421 ggggcgacgt gaccttggaa gaagaccaaa tcgccttctt cgccttcgcc tttggctttc
     6481 caaaagtggt tgaaaccgac ttcgtacatg gtggcggcag attggaaaga tgcgatgtgc
     6541 ccacccagtt ccaaatcttt cttgccggcg cgcaatacga tggcggcggc gttccagcgc
     6601 acgaatgcgc ggatgcggtg ttcgatgttt tggtcgcccg gaatgccttt ttcgttttca
     6661 accgaaacgg tattcaaata cggggtggtc gtgccgtgtg gcatacgtac gcccttgtcg
     6721 cggcagtatt tgaccaggtt ttccaagagg tattgcgcgc gttcgccgcc ttcatattcg
     6781 aggacggagc ttaacgcgtc cagccactct tgggtttcga tagggtcaac atcgtgtaat
     6841 tgggtggaca tagtatctat cctttatgtt gagtgtttaa tcggcaggga gggtgtagcc
     6901 aaccccttta ttttcgtttg tgaaaaataa taagcaaaaa cgaaaatttc taaatcaaac
     6961 cgaaaaaaat aatttaagtt taatgttttc aaaaaattat aaaagttttg gaaacaaggg
     7021 aaaacttgaa aaaaatgttc gatctgctcc acacgaaatc ctatcagcaa tcgggtctgc
     7081 tggcaaataa ccatgcctgt aaaagcaggt tttatactga agttggcgtt tggtaaggtc
     7141 aagtcttttt gatttcgaaa tattctgttt gattttggcg atattttttc ggaattgtgg
     7201 tatatcgaat cattatgtct ctgtcggcaa ttttcctatt gtagaaaatc tatacacaag
     7261 ctttgtggat aaccgtgttg ataagccacg gcttgtgtta aaaaagtctt acgcaacaaa
     7321 tgtacgctta ttttgattaa aaaataggca catttaaatc tataaaaatc atgtgcttat
     7381 gttcaatatg atgtttctgg tcatgttttt gccgtctgtt atgggatttg tcccgcgctt
     7441 ggggcagggg gtgaattttg gaggttggtg caaaacctgc ttttttcgcg ttacaatctg
     7501 cacccgattt acttttgaat ttgcctgttt ggaaaaatac ttttatgaaa gccagccaat
     7561 tctttatctc tactttaaaa gaagcccctg ccgaagccgc gcttgccagc cacaagctga
     7621 tgattcgcgc cggtctgatt aaagccaacg cgtccggcct ttatacttgg atgccgatgg
     7681 ggctgcgcgt gttacgcaaa gtcgaaaacg tcgtgcgcga ggaaatggcg cgcgcgggca
     7741 gcgtggagct gctgatgccg gtggtgcagc ctgccgagct gtggcaggaa tccggccgct
     7801 gggaatttta cggtaaagaa ctgctgcgcc tgaaagaccg ccacgaccgc gatttctgca
     7861 tgggaccgac ctgcgaggaa gtcatcgccg acatcgtgcg taaagagatc aacagctaca
     7921 aacaactgcc gaaaaacttt taccacatcc aaaccaaatt ccgtgacgaa gtgcgcccgc
     7981 gcttcggtgt gatgcgtgcg cgcgagtttg tcatgaaaga tgcttattcc ttccatgccg
     8041 actacgcctc gcttcagacg acctatgatg ccatgtatga cgcttactgc cgcatcttca
     8101 cccgtctggg cttggcattc cgccccgtcg ccgcagatac cggcagcatc ggcggtaccg
     8161 gctctcacga gtttcaagtg ttggcggaaa gcggcgaaga tgtgattgca tacagcgaca
     8221 cttccgatta cgccgccaat gtcgagctgg caccgacctt gccgcttaaa ggcgaacgca
     8281 ccgctgctca ggcagaactc gtcaaagtac atacaccaaa cgtcaaaacc attgagtctt
     8341 tggttgaatt cctgaatatt ccggttgaac aaaccctcaa atccatcgtg gttgaaggcg
     8401 aaaatgaagg cgaaatcgtt ttattgctgt tgcgcggcga ccatgagttc aacgacatca
     8461 aggcagaaaa actggcgggc gtgaaatcgc cattgacgat ggcaagttct gccgcgattg
     8521 tcgaacagtt cggcgcaaac ggcggctcgc tgggtccggt cggctttgca ggtaaagttt
     8581 atgccgattt cgccactgaa aaaggcgcgg actgggtcat cggtgcgaac gaagacggct
     8641 accactatac cggcttcaac ttcgggcgcg atgccgccga gcctgaattc gtcgatttgc
     8701 gtaatgtggt cgaaggcgac gaaagccccg acgggcaagg ccgtctgaaa ctggcgcgcg
     8761 gcatcgaagt cggacacgtt ttccaattgc gcgacaaata cacccaagcc atgaacgtaa
     8821 gcttccttga caacaacggc aaatcgcaag ttatggaaat gggctgctac ggcatcggca
     8881 tcacccgcgt cgttgccgcc gccatcgagc agaataacga cgaaaaaggc atcatctgga
     8941 ccaaagcaat ggcgccgttt gaagtcgtta tcgtgccgat gaactacaaa aaatcagaca
     9001 ccgtacgcga agccgccgac aaaatctatg ccgaattgct ggcggcaggc gcagacgtcc
     9061 tcctcgacga ccgcgacgaa cgcgcaggcg tgttgctgaa cgattccgag ctgttgggta
     9121 ttccgcaccg catcgtcatc ggcgaccgcg ctttgaaaga aggcaatgtc gaatacgccg
     9181 aacgccgcaa caacgaagcg caggcagttg caatcggaga aattgttgcg cgtgtaacag
     9241 cttcattaaa tgggtaagct tggtcaaatg ccgtctgaaa ataatttcag acggcatttt
     9301 tatttgggga gaaaatgaag tggcttcagt atttttagaa ggagaagcag tcgaggtcgg
     9361 caatattttc tgtatcggca ggaactatgc cgcacatatt gaagagttaa aaaacgaaat
     9421 accttccgaa cctgtggtgt ttatgaagcc gtcaggcagc attttgaata gcggcggtac
     9481 aatcttgctg cccgagttta gtagggatgt gcagtttgag tgcgaactcg tgctgctggt
     9541 cggtaaggat tcagacggca tgggagaggg tgaagatatt ttgggatgtg tggcggggta
     9601 cggcgtgggt ttggatttga ccgcgcgaga catccaatgc catctgaagg cgcaggggct
     9661 gccctggctg aaggcaaaag ggttcaggca ttccgcgtgc gtgtcggatt ttgcggcggc
     9721 agacagaatc ggcaatcccg agaaggtgtt gttttcatta aaacaaaacg gcgtattgaa
     9781 acagcgcggg gataccggtt tgatgattta cccgattcgg gaaattttac acaaactggc
     9841 ggcagattac ggtttgggga aaggggattt ggtgtttacc ggaacgcctt ccggcgtggg
     9901 cgcaatcggt gcgggggaca atttggcatt ggagctggac ggcttggtgc gcgcctcttt
     9961 cacggtaggg tgttaaccgc gccgcttaac cctcacgccc gttgaaacat tccgccggac
    10021 cgccctcgaa aaaaccgtgc aagatggctt gcgccgccac ttggtcgagc accgatttgc
    10081 gttttttgcc gaagacctgt gcttccgaaa gcaggctttc ggcatagacg gacgacagcc
    10141 gttcgtcaac ccaatagacg gggagattga acctgccgtt cagcctgcgt ccgaacttgt
    10201 gcgacaggtg cgtcatttca tgtttcgtgc cgtcggtatg cacgggcagt ccgacgacaa
    10261 aataacgcgg ctgccattct tgaaccagct tggcgattgc cgcgaacttt tcatcgttgc
    10321 tgccgccggt aacggtgctc aaaggatggg atagccctaa ttccgcgtct ccttgtgcca
    10381 cgccgatacg cgcttcgccg aagtcgaatg ccagtgccgt tccttttgga attttatgca
    10441 tggccggctc ccgaaaacag ggcgagcggg tcgatgccga gtttggcgaa tgcggcggcg
    10501 taacggtgtt cgtaggggat gtcgaacagg atgtgttcgt cggcgggaac agtcagccac
    10561 gcattgtcgg caagttcgcg ttcgagctgg ccttttcccc agcttgaata gcctatgctg
    10621 atcaaggctt tgtcaaccgc accttcgcgt gaaatatttt caatcacgtc tcgggaagaa
    10681 gttagcgcga tattgtctga aacgccgata ctgctttgcc agttgccgat cggggtatgc
    10741 acgacataac ctcgctcgac ttgcaccggc ccgcccatca tcacgctgtc gtgctgcatc
    10801 cgcatgggga tgtttttgcc ggtggcggaa aaaatcatgt ccatcgtaat cggagagggt
    10861 ttgttgatgg cgatgccgag tgcgccgtct tcatcgtgtt tgcagatata gacgaccgat
    10921 tgtgaaaaaa acgcgtcttc catatcgggc atggcgacga gaaagtggtt ggagaggttc
    10981 atatcagcgt ttgtcgggat tttctatcgg gttggaaatc atgcaggcgc cggcaagcag
    11041 gttgccggaa gtatcggctt gcaccccatc ggtttgcggt atgccgccgc cgaaacagga
    11101 aaccgcgctt aaggaatttt tcggcgagcc ttggatgatt ttatcgctgt acaccaaata
    11161 ggcgaaggtt ttgcgtttgg ggtcgtaata acggacaatc tgccggctct tgaacgcgaa
    11221 gctcgcaccg tgtttgaaaa cttctttcgg tttgcgcacg gcggtttcgt caaaagaaat
    11281 cgaagatgcc gtctgaacgc acgaaaccga tgcgtcggac gcgtcctctt ccaaattgac
    11341 catttccttc aagccgcctt tttttgcata cgaaatataa caggcaaccc cttgaacgtc
    11401 gggatcgtcg aatccttcca cttcgatacg gtcgtttttg cccagtatgt tgaaaacggt
    11461 acttgcccgt ccgattttat cggtttcgcc gctgccgcag gcagtcagca ggacggcggc
    11521 agacagcagt agcagtctgt tcatcaaaat ttccttatcg gttgaatccc cgttttccgt
    11581 gaaggcggca gggcttgctt tgtttggagg ggcgcacgtt cccaaaatcg ggcaacatac
    11641 ggtatgcggc ttaatgtgct accctgtgtg tcggaacaca atatccgttg cggcattgaa
    11701 aatatgatgc acaatataag gctgtttgag ccgattgcaa gtatccgcgc aaagaaggcg
    11761 caagattggg caaacggcat tttcagacgg cataactgac agtataatcc aaacgtccgg
    11821 ctgctttcgt gcagccttca gtattatcca actttttccg aaggtcgaac catgcgctac
    11881 aaaccccttc tgcttgccct gatgctcgtt ttttccacgc ccgccgttgc cgcccacgac
    11941 gcggcacaca accgttccgc cgaagtgaaa aaacagacga agaacaaaaa agaacagccc
    12001 gaagcggcgg aaggcaaaaa agaaaaaggc aaaaatggcg cagtgaaaga taaaaaaaca
    12061 ggcggcaaag aggcggcaaa agagggcaaa gagtccaaaa aaaccgccaa aaaccgcaaa
    12121 gaagcagaga aggaggcgac atccaggcag tctgtgcgca aaggacacga aggggataag
    12181 aaatcgaagg cggaacacaa aaaggcacat ggcaagcccg tgtccggatc caaagaaaaa
    12241 aacgcaaaaa cacagcctga aaacaagcaa ggcaaaaaag aggcaaaagg acagggcaat
    12301 ccgcgcaagg gcggcaaggc ggaaaaagac actgtttctg caaataaaaa agtccgttcc
    12361 gacaagaacg gcaaagcagt gaaacaggac aaaaaataca gggaagagaa aaatgccaaa
    12421 accgattccg acgaattgaa agccgccgtt gccgctgcca ccaatgatgt cgaaaacaaa
    12481 aaagccctgc tcaaacaaag cgaaggaatg ctgcttcatg tcagcaattc cctcaaacag
    12541 cttcaggaag agcgtatccg ccaagaacgt atccgccaag agcgtatccg tcaggcgcgc
    12601 ggcaaccttg cttccgtcaa ccgcaaacag cgcgaggctt gggacaagtt ccaaaaactc
    12661 aataccgagc tgaaccgttt gaaaacggaa gtcgccgcta cgaaagcgca gatttcccgt
    12721 ttcgtatcgg ggaactataa aaacagccag ccgaatgcgg ttgccctgtt cctgaaaaac
    12781 gccgaaccgg gtcagaaaaa ccgctttttg cgttatacgc gttatgtaaa cgcctccaat
    12841 cgggaagttg tcaaggattt ggaaaaacag cagaaggctt tggcggtaca agagcagaaa
    12901 atcaacaatg agcttgcccg tttgaagaaa attcaggcaa acgtgcaatc cctgctgaaa
    12961 aaacagggtg taaccgatgc ggcggaacag acggaaagcc gcagacagaa tgccaaaatc
    13021 gccaaagatg cccgaaaact gctggaacag aaagggaacg agcagcagct gaacaagctc
    13081 ttgagcaatt tggagaagaa aaaggccgaa caccgcattc aggatgcgga agcaaaaaga
    13141 aaattggctg aagccagact ggcggcagcc gaaaaagcca gaaaagaagc ggcgcagcag
    13201 aaggctgaag cacgacgtgc ggaaatgtcc aacctgaccg ccgaagacag gaacatccaa
    13261 gcgccttcgg ttatgggtat cggcagtgcc gacggtttca gccgcatgca gggacgtttg
    13321 aaaaaaccgg ttgacggtgt gccgaccgga cttttcgggc agaaccggag cggcggcgat
    13381 gtttggaaag gcgtgttcta ttccactgca ccggcaacgg ttgaaagcat tgcgccggga
    13441 acggtaagct atgcggacga gttggacggc tacggcaaag tggtcgtggt cgatcacggc
    13501 gagaactaca tcagcatcta tgccggtttg agcgaaattt ccgtcggcaa gggttatatg
    13561 gtcgcggcag gaagcaaaat cggctcgagc gggtcgctgc cggacgggga agaggggctt
    13621 tacctgcaaa tacgttatca aggtcaggta ttgaaccctt cgagctggat acgttgatcg
    13681 gattgccgaa acggtaggct ttatgcaaat cgtgccgata tggtgcgctg ttccgtgaag
    13741 tttgccgtac ctgtattttc cggtttttgg aaatcaagag agaaagttaa agaagaatgt
    13801 cgaaacctgt ttttaagaaa atcgcacttt atactttggg tgcaatcagc ggcgtggccg
    13861 tcagtctggc ggtgcagggt tttgccgccg agaaggacag gcgggataac gaagtcctgc
    13921 cggtgcaatc catccgcaca atggcggagg tttacggtca aatcaaggca aactactatc
    13981 aggacaaacc cgatgccgat ttgtttgaag gtgcgatgaa gggtatggtg gccggtttgg
    14041 atccgcattc cgaatatatg gataaaaaag gttatgccga gataaaggag tccaccagcg
    14101 gcgaatttgg cggcttgggg atggaaatcg ggcaggaaga cggatttgtc aaagtggttt
    14161 cgccgattga ggacacgcct gcggaacggg cgggggtgaa aagcggcgat ttcattgtga
    14221 aaatcgataa tgtttcgaca cgcggcatga cggtcagcga agcggtgaag aaaatgcggg
    14281 gcaagccggg tacgaagatt actttgacgc tgtcgcgcaa aaatgccgac aagccgatag
    14341 tcgtcaacct gacccgtgcc attattaaag tgaaaagcgt ccgccatcac ctgatcgaac
    14401 ccgattacgg ctatatccgc gtgtcgcagt tccaagagcg gacggtcgaa agcgtcaata
    14461 ccgccgcaaa agagctgcta aaggaaaata aaggaaaacc gctcaagggg ctggtgttgg
    14521 atttgcgcga cgaccccggc gggcttttga ctggcgcggt cggcgtgtcg gcggcatttc
    14581 tgccgtctga agcagtcgtc gtcagcacca agggacgcga cggcaaagac cgcatggtac
    14641 tgaaagccat tcctgaagat tatgtgtacg ggatgggcgg cgattcgttg gcgggcattc
    14701 ctgccgagtt gaaaaccata ccgatgacgg tattggtcaa ttccggttcg gcttccgcgt
    14761 cggagattgt cgcaggtgca ttgcaggatc ataaacgcgc ggtcatcgtc ggtacgcaga
    14821 gcttcggcaa aggttcggtt cagactttga ttcctttgtc caacggcagc gcggtcaagc
    14881 tgacaacggc actgtattat acgccgaacg accgttctat tcaggcgcag gggattgttc
    14941 ccgatgtcga agtaaaagat aaggaacgca tttttgaaag ccgcgaggcg gatttggtcg
    15001 gacacatcgg caatcctttg ggcggcgagg atgtgaacag tgaaaccctt gccgtgccgc
    15061 ttgaaaaaga tgcggataag cccgctgtaa aagaaaaagg taaaaagaaa aaggacgagg
    15121 atttgtcttc aaggcggatt cccaaccctg ccaaagacga ccagttgcgg aaagctttgg
    15181 atttagtcaa gtcgcccgag cagtggcaga agtctttggg gctggcggcg aaaaagccgg
    15241 tttcaaataa agataagaaa gataaaaaag ataagaagta ggttttgacg atgccgtctg
    15301 aaaggatttc agacggcata ttatgtttga aaggacaggt tatgagcgat tttttaccgg
    15361 aatttgaacc gtgcggcatt tatagtggat taacaaaaat caggacaagg cgacgaagcc
    15421 gcagacagta caaatagtac ggcaaggcga ggcaacgccg tactggtttt tgttaatcca
    15481 ctatacttgg gtagcgattg ggtttcagac ggcatacatt caggatttca ccgccttatg
    15541 ccgtctgaaa gacgtttccg acccatccct actacacgct ttgtccgcaa acgcatcaca
    15601 ggcaagatta tggaagtcat tcgatacccc gattccccct tcaaactcca ccaacccttc
    15661 ccgcccgcag gcgaccagcc taccgctatt gccgacttgc tcgaagggct ttcagacggc
    15721 cttgcctacc aaaccctgct cggcgtaacc ggttcgggca aaacctacac catggcgaac
    15781 gtcatcgccc aaagcggccg acccgccatc atcatggcgc acaacaaaac ccttgccgcc
    15841 cagctttatg ccgaaatgcg cgagtttttc cctgaaaacg cggtggaata tttcgtctcc
    15901 tactacgact attaccaacc cgaagcctat gtgccaagcc gcgatttgtt catcgaaaaa
    15961 gacagtgcga tcaacgaaca cattgaacaa atgcgccttt ctgccaccaa aaacctgatg
    16021 acgcgcgatg acgtgattat cgttgccact gtgtccgcca tttacggtat cggcgacccg
    16081 actgagtatc aacaaatggt gttgtccgtc aaagaaggcg acaccatcga gcagcgcgac
    16141 atcatcgcca cgctcgtttc catgcagtac gaacgcggcg atttggattt caaacgcggc
    16201 agcttccgcg tgcgcggcga cgtgattgac gtgtaccccg ccgaaagctc cgaaaacgcc
    16261 ttgcgtatca gcctgtttga cgacgaaatc gaccgcctcg atatgtttga cccgctttca
    16321 ggcagcctgc accaacgcgt cggccgctac accgtcttcc cgtccagcca ctacgttacc
    16381 ccgcgcgaca ccgtattgcg cgcctgcgag tccatcaaag aagaattgcg cgaacgcatt
    16441 gatttcttta ccaaagaaaa ccgtcccgtc gagcaacaac gcatcgaaca gcgcacccgt
    16501 ttcgacctcg aaatgctcta cgaaatgggc ttctgcaaag gtatcgaaaa ctactcccgt
    16561 cacttctccg gcaaaaaaga aggcgaaccg ccgcccacgc tgatggacta cctgcccgac
    16621 aacgccatca tgttcatcga cgaaagccac gttaccgtca cacaaatcgg cggcatgtac
    16681 aaaggcgacg catcgcgcaa gcaaaacctc gtcgattacg gcttccgcct accttccgcc
    16741 cgcgacaacc gcccgctcaa attccacgaa tttgaaaaag tcatgccgca aaccgtcttc
    16801 gtttccgcca cccccgccaa atacgaagaa gaacacgccg gacaagtggt cgaacaagtc
    16861 gtccgcccca cagggctggt cgaccctcaa atcatcatcc gccccgtcgc cacccaagtt
    16921 gatgacttaa tgagcgaaat caacgaccgc atccaaaaag gcgaacgcgt actcgttacc
    16981 acccttacca aacgcatggc ggagcaactc accgactatt acagcgaact cggcatcaaa
    17041 gtgcgctacc tgcacagcga catcgacacc gtagagcgcg ttgaaattat tagagattta
    17101 cggctcggat tgtttgacgt actcgtcggc atcaatctct tgcgcgaagg cctcgacatc
    17161 ccagaagtct ccctcgtcgc catcctcgac gcagacaaag aaggcttcct gcgctcccac
    17221 cgcagcctga ttcaaaccat aggccgcgct gcgcgcaacg tgaacggcgt cgcgattctg
    17281 tacgccgaca aaatcaccga ctctatgaaa gccgccatcg acgaaaccga acgccgccgt
    17341 gaaaaacaaa ttaaattcaa cgaagaacac ggcatcgtgc cgcaacagat taaaaaacag
    17401 gtcaaagaca tcattgacgg cgtgtaccac gaagaagaca gcggcaaagg ccgtagacaa
    17461 ggcaaaaaca aagttaaagt cggcgaaatt cacaacgaag aagacacgat taaagaaatc
    17521 gccaaactcg aaaaagccat gcaacaggcg gctagggatt tgcagtttga agaagcggct
    17581 gttcttcgtg ataggatacg gaatattaaa gagagtttgt tgtttggggc ggaataattt
    17641 tattattttt atttaacatg gagattaatt aaatgacttc tattatttta gaactccaaa
    17701 gcctagctgc caatccaaat agtgatgtag aagagttagt gagtaaaaca ttaatggttg
    17761 caagaaaatt aaaaattaat gaattaactg aatggtgtaa taatgaatta caaggttatt
    17821 catcaaaaaa tttaccaaaa tatagaatat tttatggaga gttaaaagct tttaaccctt
    17881 atcgtggcga tgttccattt atgcttcccg atgaattgag agaacgagta acaagagttg
    17941 aatatacctc atcaattagc gaaataagaa acttactaaa aacaaaaaat aataatttta
    18001 tacgaattct atctagtaaa gaaaaacagt ttttaatgaa tttacaagat actccatttc
    18061 cacttgaacc taaaataatt atttatccaa ttaacttaat gaatattcaa tcaaaagtaa
    18121 gacaactaat tttagcttgg gcattacgac tggaagagga aggtatttta ggagacggta
    18181 tccaatttac aaaatcaaaa caggagaaag caatgtcaaa ccaattcaat attcagaata
    18241 tgcaagggtt tattggggat atttttggcg gtaatgttca gcaaaatatt caagacggta
    18301 ttcatattga aaaagaaaat ttcaataaac tggctaactt tttagcaaaa aacgggattc
    18361 catctgccga attagaagat ttacgaaatg cactgataga agatggtcag cccacagata
    18421 aaaaattcgg ctcaaaagta agtgcatgga ttggcaatat tattacaaag gcttctaccg
    18481 gtgcaattga tgtttcagta ggtactattg caggaatatt aactaatgcg atttcaaaat
    18541 attatggctt aatgtaagca aatgcaatat gtgcggctcc accacacacg ccgtccccaa
    18601 ccgcccaaaa ccgcgtgcct gcctgcggct taccccctac cacccaacca acacagcaag
    18661 cgtaggttgg atacttgtat ccgacaaaac ctttaacatt cccatcattg caatccattg
    18721 tagcaatgcc caaaatgtcg gattcgagaa tccgacctac aaaatcattc cgagcataat
    18781 actatgaaat accgtcgttt ttaccgcaat ggcggcactt acttttttac ggttgtagcc
    18841 aataaacggc agaagatttt gaccgatgat gcggtgcgtt tggctttacg gcaggcggta
    18901 atggcggtgc gcgaacggta tccgtttgaa attttggcat gggtgttgat gcccgaccat
    18961 ctgcatacca tatggcggct gccggacaat gattctgctt attcggaacg ctggcggcag
    19021 atcaagcggc acagccaata tttaatcggc ggcaaactca ggctttggca aaaacgcttt
    19081 tgggaacata ctatccgcga tgaggccgat tttgcctgcc attttgatta tctgcatttc
    19141 aatccggtca aacatggcta tgtaggacaa atttccgatt ggcggttttc tacgtttcac
    19201 cgttatgtca aacagggtat ttatccgcat aattggggtg gcggcaatgc ggacttttct
    19261 attgaatacg attaaagtaa tgtcggattc aagaatccga cctacggaaa actaaagatt
    19321 ttatacgggc tacggcttgc tggcttatgc gttggcttaa tttgaaaaac agcacatcgg
    19381 ttcataatac acaaggtatt agaacaaaag aagcagttga acagggattg cgtggtaata
    19441 atagacctga aaaaggaata ggtaatagat ggaattatga tggatttata aaggaattag
    19501 cgaagtaaca ggtattctaa atatttctga taaatataaa gaacaaggag taaaaaaatg
    19561 aaagtaatca ctattacatt gtttactagc tgcatactat ctggatgcta tgggcttgaa
    19621 tatggaatga gtggcggcat tcctcatgat gactgggcaa gaggtagcca tgttagtcaa
    19681 gccaaagcag atgctgcgtg gaaagaatgt tctgacaaat atatgagaaa tggtggttca
    19741 ggattagtag aacaatgtat gaatgataaa ggattaatac gtttatctga aatacgtcgt
    19801 aggcaaaaga gagcagaaac acaaagagca gtaattaagt aacaataatg aaatactact
    19861 gttcccgaac aaagcggcat ttacgcaggt gatgacggct atattttgaa aaatgccgtc
    19921 tgtaagcaaa cgtgcttcag acggcatttt tttatccggc ggtctgttat ccgatccgtt
    19981 tgaataccaa gtcccaaacg ccgtgtccga ggcgtttgcc gcgcgcttcg aatttggttt
    20041 cggggcggta gtccggggtg ggggcgtagt ctgccgccgt attttgcagg ctgtcgaagc
    20101 tgctgaggac ttcaagcatc tgctgcgcat attcttccca gtctgtcgcc aagtggatat
    20161 agccgccggt tttgagtttg ggcagcagtt tggcgatgaa gggggcttgt atcagacggc
    20221 gtttgtggtg gcgttttttg tgccacgggt cggggaagaa tatgtggatg ccgtcgagcg
    20281 agccgtcttg cagcatattt tcgacaactt ctacggcatc gtgccgcatc acgcggatgt
    20341 tttccaaatg gttttcttct atgagtttga gcagattgcc tacgccggga ccgtgtacgt
    20401 cgatggcaag aaagtcggtt tcgggcagcc tgcgggcgat ttctgcggtt gccgtcccca
    20461 taccgaagcc tatttcgagg attttgggtc ggctgcttcc gaaacgggca tcaagatcgg
    20521 ccggtgttgc ttggtagtcg atgccgaagc tgccccataa ggtatcgatg gcgcgttgct
    20581 gcgcggaggt catgtggctt tggcggagga cgaaactgcg gatgctgcgg gggtgttcgg
    20641 cttgccagtt gttttgtgtt tggttttcgg cggtgtctgt cataatgctt tcgtgcgctt
    20701 gtgcaatcag gatgccgtct gaatgtgaaa tgcctgttcg gacggcggga aaggaaaggg
    20761 gcgattatac ctgtttcgtt tcggcagggt aggtgtaacg ctgttcagac ggcattttgc
    20821 cactgttgca acagttcttg cagaaagctt ttttgttcgt gtccgctgtt tatggcttct
    20881 tgcaggtagc ggcaggcttt ttcgttgtcc ggcccgacac cgtgtccgct gtaatggatg
    20941 caggcgaggt tgtagaacgc catactgtct ttttttgcgg cggctttttc aaaccatttg
    21001 cgtgcttcat tgtagtcggc ggtcataccc tgtccgaagt aatacatgct gcccagattg
    21061 gtttgggctt tgctgtggcc gagttctgcg gcttctgtgt agagtttgag tgcggctgca
    21121 tattcgggcg cgcattgtaa tccgtaatgc agggcttggg ctttttgata aagccgttct
    21181 gccctttgcc gcctgatggc ggaatcttta atgccgccgt attggttagg atggtttaac
    21241 gcgctgtcgg atatgagttt ctgataggcg gaaaggctgc cggcttcggc tgcctgccga
    21301 taataatgcc gggctttttc cgtatcgggg gctatgccca aactgtagcg gcagatgtcg
    21361 cccagtatcc gcaaaccttc gggatggcgt tcggcggcgg ctgcttcggc atgatgcagg
    21421 gcaagtttgt ggtttctttc cagatgcttg ccttgtaggt agatgtcggc aagtgcggca
    21481 tgggcatcgg ggtcattttc ctgtgccgcc tgttggaacc ggtaaacggc ttcatcggga
    21541 gccgtaggta ggatgagttc ggcaagcggg gtgtaggcgg gaatgtatcc ttgttgtgcg
    21601 gcggcgcgca aatgattgat agcttgggtc gtgtcggttg gtgtaccttg tccgaaacgg
    21661 tattgaaggc cgagctgcca ttgtgccgcc gccaagcctt gtgctgcagc ctcgcggtag
    21721 agaaggtgtg ccgtttcaaa atccggtggc gtaccgtact ggcagtattg ggcaagcaga
    21781 tattgtccgt gggggttgtt gttttttgcg gtcgtttttg cccatttcag ggcttcttca
    21841 aaatgtcggg acgcatacag aaggtacatc aggcggactt gtgcttcggg cagtccttcc
    21901 tctgccaacg gtctgtaaag cggtatcagg gtttccgggc gcgcgccttc caattcttgg
    21961 atatatgcca gattgtaacg cgcgtaggga tgcccctgtt cggcggcgat gcggagcatt
    22021 tccatacctt gttcgcggtc ttggtgcggg ctgtccgcgt ccatcaggtg ttttgctaac
    22081 tcgaatgcgg cggcgggatg acctgccgag gccgcttctg tcagcaggcg gcggacttcg
    22141 gtaaagtcat attgttcttg agacaggcgt tctaaggctt gatgatagag taagtcggga
    22201 ttgttcatat cagatcgttt tccgttttgt caaatcatcg ttattcgtta tgaagttagg
    22261 tttatatcgg cacgcctgcc tactgtatca tattttttac agacggattt tgtctttgaa
    22321 agcatgctaa tgcagatgct cgtaaatggt ttccgccaat gccttgctga tgccttcgac
    22381 ttgttccaaa tcttctttgc tggcggcaac gacaccgcgc aggccgccga agcgggtgag
    22441 cagggcctgg cggcgtttgc tgcctacgcc ggggatgtcg cttaaggagg aggtaacgcg
    22501 tgctttgtcg cgttttttgc ggtggcctgt aatggcaaag cggtgtgatt cgtcgcgcac
    22561 ggtttgcaat agatgcaagg ccgggctgtt gggcggcagg cggaagactt cgccggtaaa
    22621 aggcagtatg agttcttcca taccggcttt gcgctcaggg cctttggcga tgccgaccaa
    22681 gggaatgtgc agaccgagtt cttcccatac ggatacggcg acgccgattt gtcctttgcc
    22741 gccgtcaatc aatacgacat ccggccattt gacggtctcg ccgttggctt cggcttcctg
    22801 cattttgccg taacggcgca tcaatacttc gcgcatggcg gcgtagtcgt cgccgggctt
    22861 ggcggtcgtg atgttgtagc ggcggtattg cgaaggctgg atgttttgct catcgtacac
    22921 gacgcaggac gcaatagtgg cctcgccttg tgtgtggctg atgtcgaaac attcgaggcg
    22981 gttgaggccg tctgaatcca taccgaggat tttggcgagt tcgtcgatac ggtgttgctg
    23041 gctgctttgt tgcaggcggc gttgggcaat tgccatttgt gcgttttgct ccgccatttt
    23101 caaccagact ttgcgttcgc ctatggtttt ggtaacgaac tgcatttgtt tgccgtgttc
    23161 gctctctagg gcttctttca atgcgtcggg catggggaag ttgctgatga tgatgtcggg
    23221 tttgcttttg cccagatagt gttgggcgac gaaggcttcg gcgtagtctt gtccgtttgg
    23281 ttcgggatcg tttttggtgt cagggaaaaa acttttatcg ccgacgtgcc gtccgccgcg
    23341 gatgctgacc cagtgtacgc agacgatgcc gtctgaaacc gccagcgcga gcaggtcgat
    23401 atcgttggga ttgttcggat ttttactgtc gataaactga ttactctgca tgatgccgag
    23461 tgcttggatt tggtcgcggt agcgggcggc ttcttcaaac tgcaaattcg cggcggcggt
    23521 ctgcattttg tgttgcaggg tgcgggtcag ttcgtcggtc ttgccgttga gaaaagtcga
    23581 ggcctcgcgc acgctgtcgt ggtagtcttc ttcgctgata tggccgacac agggtgcgct
    23641 gcagcgtttg atttgataca gcaggcaagg gcggtcgcgg tgttcgaaca cgctgtcttc
    23701 gcaggtgcgc agcatgaaga ctttttgcag gacttggatg ctgtcgcgca cggcgttgct
    23761 gttaggatat gggccgaaat attgattagg ctttttcagc gtgccgcggt aatacgccat
    23821 ttgcggatat tgatggccgc tgagcatcaa ataaggatag cttttgtcat cgcggaaaag
    23881 aatattgtat ttgggcgaca gggctttgat gaagttgttt tcgagaatca gggcttcgga
    23941 ttcggagcgg gtgatggtgg tttcgatgtg gtgaacctgt ttcaccatca atgcgatgcg
    24001 cggggaatgg tcgtttttct ggaaatagcc ggacacgcgc cgcttgaggt tgacggcttt
    24061 gccgacgtat aagacgttgc cgctttcgtt gaaaaaacgg tatacgcctg gcaggttggg
    24121 caggtttttg aggaaaagtg ggatgtcgaa gtgttccgga aaacgggttt ctttattcat
    24181 atcaattact tgaaaaacgg tttcagacgg catattacca tatcgctgga gacagcctta
    24241 tccgttcgga caaggctgca gggcggttac atgctgctaa tcgattttta cccgtttcag
    24301 gcgcaaggca ttgctcaaca cggaaaccga gcttgccgcc attgccgcgc cagcgatgac
    24361 gggatttaaa aagccaagcg cggcgagagg aatgcccaag atattgtaga agaaggcgaa
    24421 aaacaggttt tgcttgatgt ttttcaaagt ggcttgcgac accagcagag catcggcgag
    24481 ttggttgacc gaatgctgca tcagcgtggc ggatgcggta tgttcggcaa cgtccgctcc
    24541 gcctttcatg gcgaagctga cgttagcggc ggcaagcgcg ggcgcgtcgt tgatgccgtc
    24601 gccgaccatc gccacggttt tgccggcggc tttgagtttt tgcacttcgg cagctttatc
    24661 gcgcggactc atgttgccga aggcgtgtgc gatgcccagt tgtttggcga cgtattcgac
    24721 cgtgccttgg ttgtcgccgc tcataatata gacatcgata ttgtgttttt tcagacggcc
    24781 tatggcttcg gcggtatcgg ctttcaacgc gtcggcaagt gcgaatgcgc cgatgggttt
    24841 gttatcgacc gagactgcaa caatgcttgc aatgtcccaa acgccgtctg aaaactcggg
    24901 caaggtaagt tcggcaaatt cggctttgcc tgctttcacc aaacccacgt cttccacttc
    24961 ggcggcaatg cctgcgccga caacggtttg agcgttttgt gcggcaggga tttccaagct
    25021 gcgcgtttgg gcggcggaaa cgatggcacg ggcaagcgga tgagtggcgt tttgttcgac
    25081 ggcagcggcg atgcggtaca aatcgtcttc gtcaaagccg ctgtcgggaa cacaataaac
    25141 ggcggcaacc tgcggcctgc cttcggtcag cgtgccagtt ttgtccaaca caacggcatc
    25201 gacgtgggcg gcttcttcca ttgccgctgc gtctttaaac caaatgccgt gtttcactgc
    25261 tttatccatg ccgaccataa tcgcggcggg tgtagccaga ccgagcgcac acgggcaggc
    25321 aatcaccaaa acggcgacgg cgtgcatcag cgcaaccgtc caatcgccct taatcagcca
    25381 agtaacaata aaagtcaaca acgcaatgcc cacgacggca ggcacgaata ccgcagccgc
    25441 tttatcggct acgcgcgcaa tcggtgcttt actgccttgt gcttcagaga gcgcgttcat
    25501 catgtcgccg agctgggttt ggctgccgag ctgcgtggcg cggtacacca cactgccttc
    25561 ggtcattaac gcgcccgcca acactttgcc gcccgccttt ttttcttcag gattggattc
    25621 gccggtaaga tggctctcgt ccgcccaacc gctgccgctt tcaatgatgc cgtctgcggc
    25681 aatgcgttcg ccgtggttgg cgcggataag gtcgccgatt tgcacttggt cgatgggaag
    25741 ctgtttccat tcgccgttgc gttgcacgtt gacttgggtt ggtgtaagtt tcaaaagcag
    25801 gcccaagctg ttcaggctgg attttttggt acggtgttcc aaaaatttgc ccagcgacac
    25861 aaaaccgatc accatcacgc ctgcttcaaa atacacatgc gccatgccgt gtgccgcatg
    25921 cggactgaaa aataacatat agacggaata cagataaatc gataccgtgc cgatggtaac
    25981 gagcacgtcc atattcgcca atccaccttt aatactcgcc cacgcgcttt tgtaaaacgg
    26041 gattgtcagc caaagctgca ccacactcgc caatgcgaac tgccacaacg gcggaatcat
    26101 ccaatcgtgt ctgccgatca tcatccccgc catgccgata aggaacggga cgttgatggt
    26161 gaacagcagc cacagccgcc agccgatatg gtgttctgct tcgggttgcg gcaatgtatc
    26221 ttccgttttt tccttcgcgc cgtaaccggt tttctcaatg attttggcaa tgtcggctac
    26281 tgaggttttg ctgtcgtcaa acactacctg cgcctcctcg ctggcgaagt tcactcccgc
    26341 cgattcgaca aaatcttttt tgttcaacac tttttcaata cgcgaagcac atgcctgaca
    26401 ggtcatgcct tcgatttgga aacggatttt ttgttgcata agcgtgattc ctgctttgat
    26461 attcagacgg cagtcaaggt tgcgggatgc cgtctgaacg cccgtatggt cgaaatttct
    26521 caaacgcgcc gataattcga gtagaatccg aaaacttgac acagcaaagg aaaaacaatg
    26581 tcccaacacc gcaaactgat tattttgggt tccggccccg ccggatacac cgccgctgtc
    26641 tatgccgcgc gcgccaattt aaaccccgtc attattacag gtatcgcgca aggcgggcaa
    26701 ctgatgacca ccaccgaagt ggacaactgg cctgccgatg ccgacggcgt gcaagggccg
    26761 gaattgatgg cgcggtttct cgcccacgcc gaacgtttcg gaacggaaat catttttgac
    26821 caaatcaacg ccgtcgatct gcaaaaacgc ccgtttacac tcaaaggcga tatgggcgag
    26881 tacacttgcg atgccctgat tgtcgcaaca ggcgcgtccg ccaaatacct tggtttgccg
    26941 agtgaggaag cgtttgcagg gaaaggcgtt tccgcttgtg ccacctgcga cggtttcttc
    27001 tacaaaaacc aagatgttgc cgtagttggc ggcggcaata cggcagttga agaggcactc
    27061 taccttgcca atatcgccaa aaccgttacc ctgatccacc gccgcagcga gttccgtgcc
    27121 gaaaaaatca tgatcgacaa actgatgaaa cgcgtggaag agggcaaaat catcctcaag
    27181 ctggaaagca acctgcaaga agtactgggc gacgatcggg gcgtaaacgg cgcattatta
    27241 aaaaacaacg acggttctga gcaacaaatt gccgtcagcg gcatttttat cgccatcggg
    27301 cacaagccga ataccgatat tttcaaaggt cagttggaaa tggacgaagc tggttacctg
    27361 aaaaccaaag gcggcacggc ggacaatgtc ggcgcaacca atatcgaagg cgtatgggcg
    27421 gcgggcgacg taaaagacca tacctaccgt caggcgatta ccagcgcggc ttccggctgt
    27481 caggcggctt tggacgcgga acgctggctg ggcagccaaa acatttgaat gccgtctgaa
    27541 accgaaattt tcggcggaat gcaaattttt cgcaccaaat ccttgattcc gtcggcaaac
    27601 cccaatataa tgcctgctct ttgaaccttg ccttctgctt tcgcatggca gaaggctgtt
    27661 tttaccatcc ataaggagat aacatgcgtc attacgagat cgtgtttatc gttcatcctg
    27721 atcaaagcga gcaagtgcct gctatggttg aacgttacaa aaccatgatt gccgaagcaa
    27781 acggtaagat tcaccgtttg gaagattggg gtcgccgcca actggcttac ccgattaaca
    27841 aaatccataa agcccattac gttttgatga acatcgaaac cactcccgaa gtggttgaag
    27901 agttggaaac cgcattccgt ttcaatgatg cggtattgcg ccatctaacc atcaaaacca
    27961 aacacgccgt taccgaagca tcccctatgt tgggtggtga aaaggctaag aacctgctga
    28021 gcggtgcgtc tgaagaagcg gctgcccaat aattgggatt caataatctt gtttcgcttg
    28081 ccgcgttgat tgaaaaggtt ttccctattc gatatacgcc tgccggaatc tctgtcttag
    28141 atattatttt aaagcatgaa tcatggcagg aggaaaacgg gcagcaatgc cttgtccaat
    28201 tggaaattcc ggcacggatt ttaggcaggc aggcggaaga gtggcagtat cggcaaggtg
    28261 tatatgttca cgtcgaaggt tttttagctc aaaaaagcag acgttccctt atgccgatgc
    28321 tcaggataca aaatattcaa gaatataaag gttaaacgac aatggctcgt caatcattca
    28381 aacgtagaaa attctgccgt ttcacggctg aaaaaatcca agaagtcgat tacaaacaag
    28441 ttgatttgct gaaagacttt atctctgaaa acggtaaaat cattcctgca cgcatcacag
    28501 gaacgaaggc attctaccaa cgccaattgg ctgttgccgt aaaacgcgca cgcttcctgg
    28561 ctctgctgcc ttacaccgac caacacaaat aattttggag attgaatcat gcaaattatt
    28621 ctgttagaaa aaatcggcgg tttgggcaac ttgggcgaca tcgtaaccgt taaaaacggc
    28681 tatgcccgca acttcttgat tcctgctggt aaggcaaaac gtgctactga agcaaacatg
    28741 aaagagtttg aagcacgccg tgccgaattg gaagccaaac aggccgaaat tttggcagat
    28801 gcccaagccc gtcaggaaaa attggatggc caaaccatta ccgttgcaca aaaagccggt
    28861 gtggacggtc gtctgtttgg ttccgttacc aatgctgata ttgcggctgc aatcgttgcg
    28921 actggcatcg aagccgtgaa agcaaatgta cgtctgccga acggtcctct gaaagccgtt
    28981 ggcgagtacg aagtggaagt ggctttgcac actgatgccg ttgctaaaat taccgttgcc
    29041 gtcgttgccg caaccgagta attgaaatta tcagatgccg tctgaaaccc tgccgattgt
    29101 cggaatgtgg tttcagacgg tatttgtttt gttttccgta tattctgcaa aggtctcggt
    29161 caggttgtct gtccttttgt cggaacagga gactgggcag ctttgtcctg attaattact
    29221 tgtgcaaacg gtaaaaaggt tttttcgtgt gttttaaagc aggttgtaca gcatttttcc
    29281 ggcaatcaaa agcaacataa tgccgaagga ttttttgagt ttggcagaag aaagtttgtg
    29341 ggcggttttg acaccgagcg gggcaaaggc aatggttgcc gcgctgagga cggcgacggc
    29401 gggcaggtaa aggaagccca gtgacccttc gggcaatcct gcaatattca ggccgttgag
    29461 cagatacgat attgcgccgg agagtgcaat cggccaggca aggccggatg atgtgccgat
    29521 ggctttatgg gcggggaagc cgcagtggat taagaagggg acggaaagtg aaccgccgcc
    29581 tatgccgacc cagctcgaca ttgtgccgaa cagtgtggaa accgcagtca gtccgggcag
    29641 tccgggcagc gggcgggatg ccgtctgagg gtcggtatgc agtgttttga atgcgacggc
    29701 ggttaaaaac aggatgaaga aaatttgaag cccgaacgct gggatatatt ttgcggagag
    29761 tgcgccagcg aatacgccga ataccatacc cggcatcatc gtaaatacgg ttttccagtc
    29821 gaccgcctgt tttttgtgct gccccagcat actggaaaag gcggtgaaga ccatgacggc
    29881 gaaggatgtg ccgacggcga ggtgttgcgc gtaaggatgt tgtgccaaac cctgcaaatc
    29941 aagcacccat aaaacgacag ggacaatcag cgtgccgccg cctacgccga acaggccggc
    30001 aataaaacct gccgcactgc ctacggcaag caggattaag ataatgtccc aatgccacat
    30061 ttaatccgcc tttctgtatt ttttccagaa tcggcgtgcc gccataatgt agccggacag
    30121 gctgtatccg agaaagaaca ggaagaggac gagcgacggt tcccaagtga ccagaagcag
    30181 cagtaagacg gcaagcagca ttccgacaaa ggggacttgt ctgcggatgt tgatttcttt
    30241 aaaactccaa aaagggattt ggacaatcat cgacaggccg gcaaacagtg tgatgcccaa
    30301 tgcccaccag tggacggcgg ggaatttttc gacgctgtgg ttgacccaaa tcagcccgac
    30361 aatcagcgcg gcggcagtcg gactgggcac gccgataaac cagcgtttgt ccaccttgcc
    30421 gatgagcgtg ttgaacagcg caaggcgcag ggcggcgcag gcgcagtaga tgaaggcgac
    30481 ggaataaccg attttgccga actgccaaag ctgccatttg taggcaatca gagcgggagc
    30541 aacgccgaag ctgaccatat cggcaaggct gtcgagctgc tccccgaacg cgctttggct
    30601 gttggtcagc cgcgccacgc gcccgtccat accgtccagc aacatagaga tgaataccgc
    30661 gatggcggcg gtttcataac gtccgtgcat ggattgggtg attgcgtaaa atgcggaaaa
    30721 cagcgcggcg atggtaaagg agttgggcag caggtagata ctgttttgac gcagggagcg
    30781 ttgcggggtg ttggtcgggg tttccatagc tgaagtgtct cacggacgtg gagaatcgat
    30841 aggggattat aacccaaacc attatcgaac aatacgccct ttaggatgaa gccctcggag
    30901 gcggtttgtt tttctgatgg cggatgcttt gcggggcggt ttgactctgc ctgccaccgg
    30961 gtgtgttgtt tcggattttt gccggatgga tattgttgcc gggcatttct gggcttgccg
    31021 gaaggtatcg gggggagggc atcggaatat gcggcgcacc gttcaaaccg gggcggcgtt
    31081 tccctatttt cggggagttt gcaggcttca acaaattgaa agatattttt tgcatttccg
    31141 accgtatgct gattttgaaa cgggataaat tataggacaa ggtttttcgc ccgccgcaaa
    31201 ggttggccgc aatgccgtct gaaaacaacg gcttgccgct aaggcggcgg tatgcggatt
    31261 tgcgctgctg aaatcggttt gccatacccg gcggtgcaat ctgcggggag ggataagccg
    31321 ataaggcggg acttatcctg ttttttgttt ataatgcaac agaatttgga cgaaccgtcg
    31381 ggaatttatc atgatgaaaa agatactggc cgtatcggca ctatgcctga tgactgcggc
    31441 ggcacgggct gccgatactt acggctatct cgccgtttgg cagaatccgc agaatgcgga
    31501 cgatgttttg caggttaaaa ccacaaaaga agattcgacg aaaagcgaag cgttttccga
    31561 gttggaagcc ttctgcaaag gtcaggacac gcttgcgggc attgctgaag acgagccgac
    31621 cggatgccgg tcggtcgtgt cgctgaacaa tacctgtgtc gcgctggcat acccgaaagc
    31681 cttgggcgcg ctgcgtgtcg acaacgccgt cgtgattact tctccgcgtt ttacgagcgt
    31741 tcatcaggtc gcactcaacc agtgcatcaa aaaatacggc gtacagggac aatgcggctt
    31801 ggaaacagtg tattgcacat cttcttctta ttacggcgga actgtgcgct ctttgattca
    31861 aaatctcaaa taaaacggaa aatgccgtct gaaagatgtt cagacggcat ttctatatcg
    31921 acggtcagga ttctttcgga tcgggcagca ggctgttcaa cataatggca agtacggcgc
    31981 acaagcccac gccggcaaag ctgaagctgc ccaatttgag cgtcatgccg ccgatgcccg
    32041 tggtcagtac cgagctgacg atgaccaggt ttttcggcag catcaaatcg actttggcat
    32101 caatcagcgt tttcacgccc aaagaagcaa tcgtgccgaa cagcagcagc ataatgccgc
    32161 ccattactgg catcggaatg gaagccaaaa acgcattgaa tttgccgaaa aacgccatgc
    32221 agacggcaaa aaccgccgcc caagtcatga tgacggggtt gctgtttttg gtaatcatca
    32281 ccgcacccgt tacttcgccg taggtcgtaa ccggcgggcc gccgatcaga cccgcaacgc
    32341 acacgcccaa accgtcgcct gcaagggttt tgtccaagcc cgggtctttc gtatagtctt
    32401 tccccgtcac attgccgatt gccatgatgc cgccgatgtg ttcgatggcg ggggcgacgg
    32461 caacgggcag cataaacagt gccgcctgcc agttgacctg aggcgtttca aaatggggaa
    32521 cggcgaacca gggcgcgtgt gcaatgcttg ccgtgtccac cagtcccatc agcagtgcca
    32581 aaacataacc cgaagcgaca ccgatcaaga taggaatcag cttcatcatc ctgctgccga
    32641 aaaccgatac gatggcggta acggcaaagg taaagccgga aagaatcagt gaatcggtat
    32701 agtcgatgac ctgtttgccg tccgcctgac ccattgccat gctgcttgcc gccacggcaa
    32761 cagacagacc gatgaccatg atgacggggc cgatgacgac cggcggcagc agtttgtgta
    32821 ccgccgccag tccgcgccaa cgaattagca cggcaaacac aaaatacata aagccggcgg
    32881 caaacagtcc gaacatggtg gaaggcagcc cccattctcc gatggagtag ataatcggtg
    32941 cgataaaggc aaacgaagaa ccgagaaaaa tcggcacttt acgtttggtt gtaatttgga
    33001 acagcagcgt tcccaagcct gcgcccaaaa gcgcaagagc cggattcaga ccggtcagca
    33061 ggggaaccag caccattgcg ccgaatgcca caaataaaat ctgtgcaccg gaaacggcaa
    33121 gtttcagttg gttcatacca tcttctttca atcggttcaa acggcacgga ttatactggt
    33181 ttgccgaggg tctgcgtaaa aatacatacg tcgggcaaca gatatgccgt ctgaaaggca
    33241 atgtctgtct gttgcaggat gaaagcagga gaaatggagt ataatccgac actttccata
    33301 ttcaatccgc aagccgtccg gcttccttat ttcagacggc attttccggt aatacggcat
    33361 gacagaaaaa tcccataaaa aaacagcaaa aggcagggcg ggaagcccgt ccccaacgtc
    33421 cgcacgcaac aagaaagccg acaacggcgc acggggcaat aaagtttccg agcggctcaa
    33481 ggcggtcaaa gagttgcaga aaaccgaaac caaaaaggcg cgtcccgaac atgtcgtcaa
    33541 ccttatcggc gacgcactgt ggctgatggg tttggcggca accctgtatt tggcgatttc
    33601 cctgatcagt ttcgatatgg gcgatccgtc ttggtcgcac agttcgccgg ttgtggaaga
    33661 tgtcgccaat tggggcggac tgttcggcgc gtatgttgcc gatgtcggct attatctttt
    33721 cggctggtcg ttctggtggt ggatagcggc tgcctgcgtc gtgctgtata aaaatttccg
    33781 cctgcacgca aaacagacgg aaaacgaggc atacaaccac aaaatcgctg ccgccgcgct
    33841 gtttgtcctg acggtcttca gccccgtctt ggagtatttt gtgctgggcg gaaaatatgc
    33901 cgactccctg cctgtcggag caggcggtat ggtcggcata cgcgtcggcg cagtgtttgc
    33961 gtggctgctg gggaaatcgg gcagcctgct gattatcttg gttgttctgc tgttgtcgtt
    34021 gtccctactg gtgcagattt catggctgga atttttgaac ggtgcaggca gggcggttca
    34081 aaaccgcctg agtgccttat ccggcaaggt catggcttta ggaaaacgcc ggccgaatac
    34141 caaaacagac ggtgtcgata cccaaaatac acggcgcatg gtaaaagaag ccaagaatat
    34201 tacggccaaa cccgttgcct tgcccgaagg cagcagcagc aaccgcaaat ccgtcgcggt
    34261 ttccgtcgcg ccgccgccca aaattcaggt ttctctgttt gaagatgacg aacctcggca
    34321 ggcgggcgaa taccacaagc ctacattgaa cctattgcgg attcccgaca gcgagcccgt
    34381 cagcatcaat cccgccgaat tggagcgcac tgccgaacta atcgaatcca agctggcaga
    34441 attcggcatc ggcgtacaag tcgtatccgc cacatccggc cccgtcatca cgcgctacga
    34501 aatcgaaccc gcgcaaggtg tcaaaggcag ccaaattgtt gccttgtcga aagatttggc
    34561 acgctctatg tcgctgcaat ccgtgcgtat cgtcgaaacc atcgccggga aaaacacgat
    34621 gggcatcgag ttgcccaacg acaaacgcca agacgtgatg ttgagcgaaa tcttgtcctc
    34681 gcccgtgttt gccgaagcca aatccaagct gaccgtcgcg ctgggcaaag acattgccgg
    34741 tacccccgtt gtcggcgact tggcgaaaat gccgcacctt ttggtcgccg gtatgactgg
    34801 ttcgggcaag tccgtcggcg tgaacggcat gattatgtct atgcttttca aagctacgcc
    34861 cgacgaagtc cgcttcatta tgatagaccc gaaaatgctc gagttgagca tttacgacgg
    34921 cattccgcac ctgctctgtc ccgtcgtgac cgatatgcgc gaagcagggc aggcgttgaa
    34981 ctggtgcgtc gccgaaatgg aaaaacgcta ccgcctgctt tcccacgccg gtgtacgcaa
    35041 tctggaaggc ttcaaccaaa aagtcgaagc cgcaaaagcg gcaggcaagc ctttgcttaa
    35101 tccgttcagc ctgaaccccg acgagcccga gccgctggaa aaactgccgt tgattgtggt
    35161 cgttatcgac gaacttgccg acctgatgat gaccgaacgc aaagccgtcg aacagcaaat
    35221 cgcccgtctc gcccaaaaag cgcgcgccgc cggtatccat atgattgtcg cgacccaacg
    35281 tcccagtgtc gatgtcgtta ccggcctgat taaagccaac atcccgacgc gtatggcgtt
    35341 taccgtgcaa agcaaaatcg acagccgtac catcctcgac caaatgggcg cggacgaact
    35401 gctcaaatat ggcgattcgc tgttccttca gcccggcagt gccgaaccga cccgcctgca
    35461 aggcgcgttt gtttcagacg acgaagtaca tcaagtcgtc aactacgtca aatcgcaagc
    35521 cccagccgac tatattgaag gtctgctcag cggcgaggcc gcgctggaaa ctgccaatat
    35581 cgttaatccg aatgcagaca gcgacgaatt gttcgatcag gcagtcgcct atgttttgga
    35641 aagcaaaaaa acctccattt cgtctttgca gcggcagttg cgtatcggct ataaccgcgc
    35701 ggcaaacctg atggaggcac tggaaaatgc gggtgtcgtt tctcccaccg acctcaacgg
    35761 cagccgtaaa attttggcgc acaaggacca tttgtagccc gtattgcaaa atgccgtctg
    35821 aacggcggaa ttggcgtttc agacggcata ttatgtttca ggcgaaacat tgtgatatac
    35881 ttgccagcta aaatttcccc tttgcggcaa tgcggttcaa atatcgtacc gttgcgctgt
    35941 ttgcttcccc atgtagggaa gaaagtttat cattttatca acacaacaaa tttaagggct
    36001 tatgatgagc gtaactgttg aaactttaga aaatctggaa cgcaaagtag tgttgtccct
    36061 gccttggtcc gaaatcaacg cagaaaccga taaaaaactg aaacaaactc aacgccgtgc
    36121 aaaaatcgac ggtttccgtc cgggtaaagc acctttaaaa atgattgccc aaatgtacgg
    36181 tgcgagcgca caaaacgacg tgatcaacga gctggtgcaa cgccgcttct acgatgttgc
    36241 cgttgcccaa gagttgaaag tggcaggctt cccccgtttt gaaggcgttg aagaacaaga
    36301 cgataaagag tctttcaaag ttgccgccat ttttgaagtg ttccccgaag tcgttatcgg
    36361 cgatttgtct gcacaagaag ttgaaaaagt aaccgcttcc gtcggtgatg ccgaagtgga
    36421 ccaaaccgta gaaatcctgc gcaaacaacg tacccgcttc aaccatgtcg aacgcgaagc
    36481 tcaaaacggc gaccgcgtca tcattgactt tgaaggcaaa atcgacggcg aaccttttgc
    36541 aggcggcgca tccaaaaact acgccttcgt attgggcgca agtcaaatgc tgcctgaatt
    36601 tgaagccggc gtagtcggca tgaaggctgg cgaaagtaaa gacgttaccg tcaatttccc
    36661 tgaagactac cacggtaaag acgttgccgg taaaactgcc atgttcacca ttacgctgaa
    36721 caacgtttcc gaagcgactc tgcctgaagt cgatgcagat tttgcaaaag ccttgggtat
    36781 tgcggatggc gacgttgcca aaatgcgcga agaagtgaag aaaaacgtaa gccgcgaagt
    36841 ggaacgccgc gtaaacgaac aaaccaaaga atccgtaatg aacgcgctgc tcaaagccgt
    36901 agagctgaaa gcacctgttg ctttggtaaa tgaagaagcc gcacgcttgg caaacgaaat
    36961 gaaacaaaat tttgttaacc aaggtatggc tgatgctgcc aacttggatc tgcctttgga
    37021 tatgtttaaa gaacaagccg aacgccgcgt gtctttgggt ctgattttgg ccaaactggt
    37081 tgatgaaaac aaactggaac cgactgagga gcaaatcaaa gccgttgtcg ccaacttcgc
    37141 agaaagctac gaagatcctc aagaagtaat cgactggtac tacgcagagc cttcccgcct
    37201 gcaagccccg acttctttgg cgatagaaag caacgtcgtt gatttcgttt tgggtaaagc
    37261 caaagtaaac gaaaaagctt tgtcttttga cgaagtgatg ggcgcgcaag cctgattatc
    37321 ctgaaaatgc cgtcttaggg cagtttttga aagcaccgaa gccgctttta aagcccgctt
    37381 tggtgctttt acatcatgaa aggagacgaa atgtcttttg ataactatct tgtccctacc
    37441 gttatcgagc agagcggtcg cggtgagcgt gcattcgata tctattctcg gcttttgaaa
    37501 gagcgcatcg tattcttggt cggcccggta accgacgagt ccgccaatct ggtggttgcc
    37561 caactgttgt ttttggaaag tgagaatccg gataaggata ttttcttcta tattaactcg
    37621 ccaggcggtt cggtaacggc cggtatgtcg atttacgaca ccatgaattt tatcaagccc
    37681 gatgtatcga ctttgtgctt ggggcaggca gcaagtatgg gcgcgttctt attgtcggca
    37741 ggcgaaaaag gcaaacgttt cgccctgccc aacagccgga ttatgattca ccagccttta
    37801 atcagcggcg gcttgggcgg tcaggcatcc gatattgaaa ttcacgcacg cgaactgttg
    37861 aaaatcaaag aaaaactcaa ccgcctgatg gcgaaacatt gcggccgcga tttggcagat
    37921 ttggagcgcg acaccgaccg tgataatttc atgtccgccg aagaggctaa agaatatggt
    37981 ctgattgatc aaatcttgga gaaccgtgct tctttacagt tttaataaga aatctgagag
    38041 aaacaaatgc cgtctgaaaa cagttcagga cggcatttgt cttataggga ctgtataggg
    38101 atgattttgt tctggttgcg tttggagccg ttttcaccat agttggtttt gacatattcc
    38161 tctacaatag ctaggaattc agttgcaata ttatcacctt tcagtgtgac tttgcgctcc
    38221 ccgtccacat aaaccggcgc gacgggtgtt tcccccgtac cgggcaggct gatgccgatg
    38281 tcggccaatt tgctttctcc gggcccattg acaacgcagc ccattacggc aacgttcagg
    38341 gattcaaccc cgggataaag ggtacgccat atagacattt tttggcgcag gtaattttga
    38401 acatcttgtg ccagctcttg aaatacggta ctggtggtac gcccgcagcc ggggcaggcg
    38461 gtaaccatcg gcgtaaacga acgcaatccc atagtctgta aaatctcttg cccgacgacg
    38521 acctcctgag tacgcgggct gccaggttcc ggagtcagtg aaatgcggat ggtgtcgccg
    38581 attccttctt gaagcaagac ggataatgcc gccgttgatg cgacaatgcc tttgctgccc
    38641 ataccggctt cggtcaaacc caaatgcagc ggataggcgc aacggctgcc cagttcgcgg
    38701 taaacctgaa tcaaatcctg aaccgcgctg actttgcacg acaggatgat tttgtcttcg
    38761 ggcagtccca atagaacggc tttttcggca gattccaaag cggagacaat cagtgcttcc
    38821 ttcgtcactt cttcgggcgg tttcggcgcg gaaaaagcga ggttggcatc catcatacgt
    38881 ttggcgaggc tttgatccaa agaaccccag tttacgccga tgcggacggc tttatcgttt
    38941 tcagcagcag tccgaatcat aaaggcaaat ttttcatcgc cttttacgcc tttgccgaca
    39001 ttgccgggat tgatgcggta tttggacaat gctttgccgc attcgggaaa ttccgccaac
    39061 aggcgttcgc cgttgaagtg gaaatcgccg ataagcggtg tggcatagcc catatcgtcc
    39121 aagcggcggc ggatttcggc aactttggac gcggcttcgg ggctgttgac ggtaatacgc
    39181 accatttcgg atccggcatc gctcaattcc ttaatctgca atgcggtggc ttttgcatcg
    39241 gcagtgtcgg tgttggtcat agattggata acgacgggtg cttctgaacc gacggtaata
    39301 tgatcgatgc ggacttgatg cgtcttgcgg cgttggagtg tgttcatatg gtttgaatct
    39361 gtttattgac cggtgaggac ggtttgcaat tcttccgagt aggggaaatt cgcctgcaat
    39421 tgtgcttcat attcgtatgc cgcctgtgcg ttgccgaggg ctttggcaat tttccagcct
    39481 agcagcaaat catcggcctg aaggacttct accctgcttt ggtatttttt aaagtagtaa
    39541 tcggcatcgc ccaactgccc ggccagcatt ttggtgcgcg ccagttcttt aaatgcgggt
    39601 gggaactgcg gctgggcggc gagggaacgt ttcaaatagg cttccgccaa tccgaattgc
    39661 ccctgttttg cgctgcatat gcctttattc aggttggcaa tataaggggt cgggtaggtg
    39721 gggtcggcca gggctttgtc gaaatatgcc atagattcgg cagggcggtt gagcctgccg
    39781 cacaggaacc agccgtagtt gttgttgatt tcggcactgt cgggtttgat ggagagggct
    39841 tgccggaaac tttcctgcgc cttgtcgtta actttcaggt attgatagat ttcggcacgg
    39901 accagccagg caagctcgtt tttagggtct gatttcaagg cgtcttcaat acttgccgtc
    39961 gcctgacggt agtcctgacc gcgcatatat tccattgcca actgggtttt gatattggaa
    40021 acctgattgg ctttttctgc ccgcgagggg cggtaggaag tgctgcacgc gcccaaggca
    40081 aggacaagta ataaagagat tcgtttggat ggcttaaaag gcataattac ccctgttgtc
    40141 cgattaaaat ctgctgccat ttttgttggc ggcgcgtttt atcctgaacc tgccccgcca
    40201 actgtccgca ggcggcatcg atgtcgtcgc cgcgcgtttt tcgtacggta acgacaaatc
    40261 ctgcctgctg caaaatatcg cggaacacac ggatgttctc attgctggag cgttcgtatc
    40321 cggagtttgg gaagggattg aacggaatca gattgaactt gcagggaaca tctgtgacca
    40381 gttcgatcag ttcgcgcgca tgttgcgcct tatcgtttat tccgtccaac atgacgtatt
    40441 cgaaagtgat gaaatccctg ggtgctttga ccagatagcg ttggcatgcg gccatcaatt
    40501 ctttcaaggg atattttttg ttcaacggta cgatttggtt gcggacttcg tcattggaag
    40561 cgtggaggga aaccgccaaa gccaccggca tgacatcgcg caacctgtcc atttggggaa
    40621 ccatacccga agtggaaacg gttacgcggc ggcggctcaa accgtagccg tggtcgtcca
    40681 gcatgatgct taaggcggta acgacattgt cgaagttcgc catcggctcg cccatgccca
    40741 tcatgacgac gttggaaata acgcgctcgt ttttcggtgt aacgcccatc gctttgtttg
    40801 cccaccacaa ttgcccgatg atttcggcag cagtcaaatt gcggttgaag ccctgccgac
    40861 cggtcgaaca aaatgtacat tccaaagcgc agccgacttg tgaggaaatg cagagcgtgc
    40921 cgcgatccga ttcggggatg aagacggttt ccaccccgtt gcccgtaccg acatccaaaa
    40981 gccattttcg agtgccgtct gaagattttt gagacatcat cagcttggga atttcgatgc
    41041 ctgcctgttc gttcagttta tggcgcaacg attttgccaa atcggtcatt tcgtcaaaat
    41101 tttgcgcgcc ggattggtgc atccaacgca taacctgttt ggcacggaaa ggtttttcgc
    41161 ccatatcggc aaaatgtcgg gtcagccctt ggaggtcgta gttgagcaga ttggttttca
    41221 tgtatttgtg tttttcttaa attaaggctt caaataaaaa attgcagggc aggcaagttt
    41281 gatttgaagc cttttgcaac agagttttca gacggcatgg atatatttta tgccgtctga
    41341 agaggagttg tgcggtgtat tgtatcaacg ggggcagatt tcggtttggc tgaaaaagta
    41401 ggcaatttcc aaagcggcat tttccggagt gtccgagccg tgtacggcat tgatgctgac
    41461 cgaagtggca aagtccgcgc gtatcgtgcc ttcggcggct tcggaaggat tagttgcacc
    41521 catcagttcg cggtttttca gaacggcgtt ttcaccctct aatacctgaa tcataaccgg
    41581 accgccggtc ataaattcaa ccaatccggc gtagaagggg cggtctttat gaaccgcata
    41641 aaattcttgc gcctctttga gggtaagctg cttcattttg gcggcaacga ttttcagacc
    41701 gttctcctca aagcggctgt atattttgcc gataacgttt ttgccgacgg catcgggttt
    41761 gatgatggag atggtacgtt caatcgccat gctatatcct tatttttact taagaagaat
    41821 caaatcggta ttctatcaaa aaaataactt atccgcctga agccttggga gatagggtca
    41881 ggtgcggctg ttccaaataa acttcggact gcatttcgac catccggctg gcggtgcggg
    41941 taaattcttc ggcaaaatcg ccttctgtat agatatggtt gacatctacc gcgccggtgg
    42001 cacacagttt gacacggaaa tcgtagagta cgtcaatcag ccaagtcagc cgccgtgcct
    42061 ccgccttttc ttgcggtgag agttgttcca aacctgaaat aaaaaccatt tcataatgtt
    42121 cggccaaata caggtagtcg gactgtgagc gggggccgaa gcacagtgcg cggaaatcaa
    42181 accatatggc acggccggac tcggctttgt ggggaatctc ccgaccgtgg atggtgctga
    42241 tgccggggtt caaatcggta atgcctgtca tttctttgaa cagttttgcc agttttgcct
    42301 cattttcttc attggcaggc gtaaagaaaa tctcggcggg gcggagggta cgcagtcggt
    42361 agtcttcacc gccgtcaaca tttaagacgg tcaggctgga ctcgatgagc gcgattgtgg
    42421 gaagaaaact gctccggttt tgaccttgcg ggtagagttc ggaaggcgcg tagtttgaag
    42481 tcgccaccaa aacaacgccc tcgttaagca ggttttccag cagacggcct aaaatcattg
    42541 catccgcaat atcgctgaca tgaaattcgt caaaacacaa tacgcgggtt tctttggcaa
    42601 tctcggcggc aacggatttc aacgggttgc tttcgctttt cagggttttc agccgccggt
    42661 ggatttctgc cataaaggca tgaaagtgga cgcggcgttt gcggcggtaa gggaggcagc
    42721 cgaaaaaagc gtccatcaga aagcttttgc cgcgtccgac cccgccatag aaataaagcc
    42781 ctttggggac ttgcggggaa cgcaaactcc tgcctaaaaa acggtttctt ttgcgtttga
    42841 acatcatcaa ttcggtccaa agccgatcga ggtgttcgat ggcggcagcc tgcgcgtcgt
    42901 cgcggatgaa gttgggcagt tgtgaggcag cctgatacca ggtcagcggg ctgtggtttt
    42961 caaacggcgg ggctttaaaa agttggtctc tactactcat atttaacctt tttatacttc
    43021 ttgcggctaa gaaagaaaat gcttactgtc ggtattataa atgatttcct tcaaacttgg
    43081 cattttccgt ggaaaagaat aatgacgcgc acaagggggt atgagcaaag gcggcgtttc
    43141 aatatggtgc agatatgagc tcaaatgcct tttatagtag attaaattta aaccagtaca
    43201 gcgttgcctc gccttgccgt actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat
    43261 ttttgttaat ccactataat ccgtagagtc ggcttcttcc ggctcagacg gcatacgttt
    43321 atgccggcac ttcttaccgc cctcgtgccg gctatcccaa aactgctttg aacactgaac
    43381 gctctttggc ttacttcaaa aatgccgcgt gataggcaat atgctcgcca ataaaaccgg
    43441 cgatgaagta atagctgtga tcatagcctt tgtggaagcg cacatcggcc ggttggtttg
    43501 ccgcacgaca ggtttcgata aaatcttggg tacgcaattg tgtcggcaaa aactcatctt
    43561 ccaagccctg atcaatgcgc ataccttgca ccttacagcc ttgtcggatg agcgagtcgg
    43621 catcatattg ctgccatttt tcgcgattct ttcccaaata ggcagaaaag gctttttctc
    43681 cccaaggcac gaggcttggc gataaaatag gcgaaaaggc agaaacactt tgataacgtt
    43741 cccggtttcg cagtgccaat accaatgcgc catgtccgcc cattgaatgt cccataatgg
    43801 aacgtttgcc gttggtagga aatttttcct caatcagact aggcaactca ttcaaaatat
    43861 aatcatacat ttgataattc gtcacccaag gctgctcggt cgcattcaga taaaagcccg
    43921 caccctgccc taaatcgtaa gccgcatcgt tcggcacttg ctctccgcga gggctggtat
    43981 cgggggcaac cacaatcact tgatgttctg ccgcataacg ctgaaaacct gatttggtaa
    44041 tgaaattttg ttccgtacaa gtcaagccgg aaagccaata aatcacacca agcggtcgat
    44101 tctccggatt atttggcaaa tagacggcaa atttcatttc gcactgcagc gtttgggcat
    44161 aatgcgccca aacttgctgc aaaccgccaa aaatttgatg ttgctcaatc agtttcatcg
    44221 cgtaccttag taatgaataa cagcgcggat cgatttacct tcatgcatta aatcaaaggc
    44281 ttcattgatt tgatcgagcg tcattgtgtg ggtcacaaac ggttctaact cgatgtcgcc
    44341 tttcattgaa tcttccacca ttttcggaag ctcggagcgg cctttcacgc cgccaaatgc
    44401 agtgcctttc caaacacggc cggttaccaa ctggaacgga cgagtggaaa tttcttggcc
    44461 agcacccgct acgccgatga taatggattg tccccaacca cggtgtgcgc tttctaatgc
    44521 ctgacgcatt acatttacat tgccgataca ttcaaaggtg tggtcgatgc cccatttgtt
    44581 gatgtctaac aacacatctt tgatcggttt atcgtaatcg ttcgggttca aacaatcggt
    44641 tgcaccaaac tgttttgcca actcgaattt tgcgggattg gtatcaatgg cgataatacg
    44701 gccggctttg gcttgacgcg caccttgcac caccgccaaa ccaatcgcgc ctaagccaaa
    44761 cacggcaaca gagtcgcctt cttgcacttt tgccgtatta tgtaccgcac caatacctgt
    44821 ggtaacgccg cagccgagca aacatacttg ttcatggttg gcttcagggt tgattttcgc
    44881 cagtgaaact tcggcaacaa cggagtattc actgaaagtc gaacagccca tatagtgata
    44941 gattggctga ccttgataag aaaaacgcgt cgtgccgtcc ggcattaagc ctttaccttg
    45001 tgtatcacgc actgagacgc acaagttggt tttacctgaa caacaaaact cacattcgcc
    45061 acattcggcg gtgtaaagcg gaatcacgtg atcacccggt tttacgcttg acacaccttc
    45121 gcccacagca acgaccacac ccgcaccttc gtgtccaagc accacaggga atacgccttc
    45181 aggatcgctt cctgataacg taaacgcatc agtatggcac acgccagtgt gggtattgcg
    45241 gattaacacc tcgcctttac gcggcatttc tacgtcgatt tccacaattt gtaagggttg
    45301 gttaggggcg aatgccaccg ccgcacgaga tttgatggtt gaatcggttt gtttcatttc
    45361 cattgtcttt cctcttaatt cattgacaaa gttgccttac ctgagcaaca tagcaacagt
    45421 ttacacttta gagttaactc taaggcaagt gttttttact gtttttgttt agaaggaggg
    45481 aaaatgactt ataccactgc caaagccgcc gaaaaaatag gcatctccgc ccacacccta
    45541 cgtttttacg acaaagaagg cttgttgcct aatatcggac gtgatgaata cggtaaccgc
    45601 tgttttaccg ataacgattt gcaatggttg ggcttattgc aatgcttgaa aaatacggga
    45661 atgagcttaa aagacatcaa acgctttgcg gaatgtaccg tcattggcga cgataccatt
    45721 gaagaacgcc tttccttgtt tgaaaatcaa atagaaaatg tgaagtgtca aattgccgaa
    45781 ttaaaacgct atttagattt gcttgaatac aaattggcgt tttaccaaaa agcgaaagca
    45841 ttaggttcgg taaaagccgt aaatttgccg caaattcctg aaacggctta gttttagtgc
    45901 aataagcagg atttttgtcc tgttcgtaat agaaatcaaa aatttgttgt ttaaaaagcg
    45961 gattgtaagc aatgatatag tggattaaca aaaatcagga caaggcgacg aagccgcaga
    46021 cagtgtaaat agtacggaac cgattcactt ggtgcttcag caccttagag aattgttctc
    46081 tttgagctaa ggcgaggcaa cgccgtactg gtttttgtta atccactata aaaaaatcca
    46141 cgctctaatc cgttgcttgc ttggctcaag gtattgaagc agcggatgaa gttaaaccac
    46201 agaaaaaacg ccgcgtaaca gcggcgtttt gatgctaagg tttaattggc attttctttt
    46261 aaagccaagt cgacccgctc gcgcaattct ttaccgggct tgaagtgggg tacatgtttt
    46321 tcaggtactt ccacacgctc gccggttttg ggattgcgac cgatgcgggc aggacgatgg
    46381 ttcaaatcga agctgccgaa accgcggatt tcgatgcgtt gacctcgggc aagcgatcta
    46441 gtcatggtgt caaccaagac ttttacgctg tactctacgt cttttgccag aagatgcgtg
    46501 ccgtttttgg cggcaaacac ttctgccaaa cgaaccatta actcagactt tgtcatgtct
    46561 gcaaccttat tcttgttcgc cggagagttt ggctttcagc aggtcgccca agctggtggt
    46621 gccggcattc gcattggcgg cggcattgac ggagttcagt gcttcgcggc tttctttggc
    46681 atctttggct ttaacggaaa gtttgatgct gcggtttttg cggtcaacgg taacgatgac
    46741 ggcttcaact tcgtcgcctt ctttcagttt ggtggtcaaa tcttcaacgc ggtcggctgc
    46801 aaattcggaa gcaggcaggt agccttctac ttcgtcagac agggcgataa cagcaccttt
    46861 ggcgtcaaca gatttcacgg aacctttaac caaagaacct ttgtcgttca cgctgatgaa
    46921 gttgccgaac ggatcgcctt ccagttgttt gatacccaag gagatgcgtt ctttttccac
    46981 gtcgattgcc aatacgacgg cttcgacttc ttcgcctttt ttgtatttgc gtacggcttc
    47041 ttcgccggat tcggtccagg acaggtcgga caggtgaacc aaaccgtcga tgccgccggg
    47101 caggccgacg aatacgccga aatcggtaat ggatttaacc gcgccggaga ttttgtcgcc
    47161 tttgttgtgg ttggcggcaa attcttccca aggattggct tggcattgtt tcatacccaa
    47221 agagatacgg cggcggcctt cgtcgatttc caaaatcatg acttcgactt cgtcgcccag
    47281 ttgtacgact ttgctcgggt gtacgttttt gttggtccag tccatttcgg agacgtgtac
    47341 caaaccttcg atgccttgtt cgatttcgac gaatgcgccg tagtcggtca ggttggatac
    47401 tttgccgaac aggcgggtgc cttgaggata acggcgggtc agaccgctcc aaggatcttc
    47461 gcccagttgt ttcataccca aggaaacgcg ttgtttttct tggtcgaatt tcaatacttt
    47521 ggcttcaact tcctgaccga cttccaagac ttcactcggg tgtttcacgc gccgccatgc
    47581 caaatcggtg atgtgcaaca gaccgtcgat gccgcccaag tcaacgaatg caccgtaatc
    47641 ggtaatgttt ttaacgatgc ctttgatgac ggagccttct tgcaggtttt ccagcagggc
    47701 tttgcgttct tcacccaaag tggcttccag aacggcgcgg cgggaaacaa cgacgttgtt
    47761 gcgttttttg tccagtttga tcactttgaa ttcgatctct ttgccttcga agtgagaagt
    47821 gtcttttaca ggacgtacgt cgaccaaaga acccggcagg aatgcgcgga tgctgctaat
    47881 cataacggtc aggccgcctt tgacttttcc gttgatgatg ccggacagga tgtcgccgtt
    47941 ttccatggct tcttccaggg caatccaatc ggcagcgcgt ttggcttttt cgcgggacag
    48001 tttggtttcg ccgaagccgt tttcgacgga ttcgatggta acggtaacga agtcgccgac
    48061 tttaacttca atttcgcctt gagcgttttt gaattcagct acatcaatca gggattctga
    48121 tttcagacct gcgtttacgg taacgaagtt ttggtcgatt gccactactt cagcggtaat
    48181 cacctcaccc gggttcattt cttgcagggt aaagctttct tccaacagct gagcaaaatt
    48241 ttccatagac atatataact cttttcggta caccgccaag gggtgcgggg tgggttggtg
    48301 ggtgtctgcc gtccttggca gggcagacgg gtaaataagg tttcagacgg catatggggg
    48361 atttttatgc cgtctgaaac ataatgcggg cgattatacc tgaaaattta aactttacga
    48421 taccaatcaa gcactttttt tacagtttct tctatagtca ggcggctcgt atccaaaagc
    48481 agggcatcgg gttgttgttt caggggggca accttgcggt ttcggtctgc ctcgtctctg
    48541 gcttcgatgt cggacaggat gcgctcgaat gccaaacctt cgcaggggat gccgatttgt
    48601 ttggcgcggc gttcggcacg gattttggat tctgccgtca ggaagatttt aagttcggct
    48661 tgggggaaga cgaccgatcc ggtgtcccgt ccgtcggcga ccagtccttt ttcggtcaga
    48721 aaatcgcgtt ggcgttgcag cagggcggcg cggactttag gcaactgtgc gactgcggat
    48781 gcgcccatgc cgatggcttc tgtccggatg ccgtctgaaa cgtcttcgcc gccgagcagg
    48841 atgcggctgc ctgaaaatac ggcgggcagt ttttttgcca gttcggaaac gttttcttca
    48901 tcgtgccatc ccacgccttg tttttgtgca tatagggcgg tcaggcggta gagtgcgccg
    48961 gtatcgagat aatcgtatcc caatgcggcg gcaacgcggg cggcaaccgt gcctttgccc
    49021 gatgcgcccg ggccgtcgat ggcgatgact ttttgtctgt tcataagggg gattcctgat
    49081 ggtttggggt atgggttttg ccgtctgaag gatgtgtttc ccgttggggc ggattctacc
    49141 tgttttaaag gacgattgtc taagcagacg gaacgccgcc tgcccgaaaa catccgacag
    49201 aagccggcaa gccggttcgg attccggcgt tgcgggtatt gtggcgggca tcaaggcaat
    49261 gctgtctgaa agaggtatga ccttcagacg gcatcgattg ctgcagatta gaacaggttg
    49321 ctgacgaaaa tcagcagaat caccagcggc acaagatatt tcacataagc aaaccaaata
    49381 ttgaccgtcg tatggttgcc tttataaagc aattcgtcct tcgcttcgtc cttcatcaca
    49441 aaaccggcaa acagcgcgga accgagcgcg gtcagcataa acaagatgtt gccgctgatg
    49501 tagtcgaagg catcgaaaat atttttgccg aacacggaaa cgtctttcca cggaccatag
    49561 ctcagaatgg acgggatgtt gccgaaaatg aagatggcag ccaatacaat cgtaatcgcg
    49621 gcggtacggc ggattttggt tttttcctga atggtcgtaa tcaacacttc ataaatggtc
    49681 agcgaagttg tcaacgcggc aatcaggagc agcgagaaga aaatgacggc gaacacagat
    49741 cctgcccaca tatgcgagaa cacaatcggc aaactttgga ataccaaagt cgggccggaa
    49801 tcgggggcaa cgccgaagct gaagagcgac gggaaaatca taaagcccgc aagtatggcg
    49861 atgatggtat tggtaattgc cgtgataact gccgtctgaa ccagattttc gtttttatcc
    49921 aaatagctgg acaaggtaat catcacgccg aaacccaggc tcagggcaaa aaatacctgc
    49981 cccaaaacga agacgaacag ttcggcggta atcttgctga aatcaggttt cagatagaaa
    50041 gcaacccctt ccattgcgcc cggaagggta acgttgcgga cgaccatcgc gattaggaac
    50101 aaaaacagca gcggcatcag ctattttgcc gctttttcaa tgccgccgat aacgcctttg
    50161 accaaaatcc attggttcac ggcgacaaaa agcagcgtat aaaacgcaat ttcccaaggg
    50221 ctgtttcaat gtgttcggca aagaagcctt ttgtaaccac accgtcgatg gggctggaaa
    50281 tattcaaatt tcctccaata atattaacga tatagctgat tacccagccg ccgagtgcca
    50341 tgtaataagc catgatgccg aacgcgccga gcagccccat ccagccgacc agtttccaaa
    50401 ttttagcaat gggtttgccg ttcatcggac cgccgaacgc atccagcgcg ttcacgcctt
    50461 tgcgccgtcc gatgacgttt tccaccaaaa tcatcgggat gccgataacg agcatggcga
    50521 tacagaataa aaacacatac gcgccgccgc cgttttcacc gaccaaatac gggaaacgcc
    50581 acgtcgcgcc gaagccgaca gtcgcgccgg caacagtcag gatataggtt aatcggctgg
    50641 atcaggtttg acgattggta tttgaagggg aagacatatt gaaaccgtgt ccgattgaga
    50701 taaagcggaa attctacacg cgttttttaa caggaattga ctgattgttt ttcaactgtc
    50761 tagtgatttt ccatgtaaaa ggcatatatt tcagtgagta tttctgatga gtataacccg
    50821 atgaggaaga atcggagttt ataaatagat taatttgtta ttcttctaca tcggtgtatg
    50881 gaaatgaaat tttgttaatc acattaatga tagcatttta ataatgatga aagagaggga
    50941 atttgaaata aaaaaccatc tatacaaggg gagaagtata gatggcaaaa cacattacgg
    51001 ggaaaacgtc ttactcataa gcctgcttga acaggcgtta ctcagacaaa tggattatat
    51061 cgtaaattga ttttttgcgt taaattgggt taaaccatat atttaatgag tatgtggatg
    51121 aatataaatg gaattcttgg atgttatttt agaatttcgg acaatcgata aatttccatt
    51181 cgccgggttt caggttttct gtttccaaat gtgcgaatcg ccggcgatga aggtgttgca
    51241 cgcggttgcc tgcggcggcg accatacgtt tgacttggtg gtattttccc tcggtaatgg
    51301 tcaggagcaa tgcggacggg ctttccaata cggcatcggc ggcgtaaacc gtttcgtttt
    51361 cgtcgtggag caggacaccg tttttcaggg tttcgcaaag cgtttcgccg gcagggtgct
    51421 tgagtgtaac ttcgtatagc ttgggaattt ttctgctcgg cgaagtcagg ttgtggttca
    51481 gtttgccgtc gttggtaatc agcaatacgc cggtcgtatc tgcatccagc ctgccgaccg
    51541 cctgcatatc gatgttccgc atattgtcgg ggaacaggct gaatacgctg cggtagtgct
    51601 tgggtttgtg cgaagtttcg taatcttcag gcttgttgag catgatgtag aaatagggtt
    51661 cgggaacgac ggttactgct tccccgtcaa tatccaacgt ttcgacggat gaggaatcga
    51721 tgtctgcatc ggtgtcgtcc atgcaggttc cgttgatgaa aacataaccg ccggcaatca
    51781 gccattggca ctgcttgcgg cttcctatgc cttgatattg caggtatttg ataagtttca
    51841 tgatggtatg ggaaatgtgg gatgaaaaag acaggactga gaaagtcctg tcatgtgccg
    51901 tatccgaatc agcttccaat cagtttgacc ctctgtcccg gattgatggt gttcaggttg
    51961 ggattgagcc ggcggatgtc gtcgatatgg atattgaagc gcgcggcgat acttttgaag
    52021 gtgtcgcctt tgcgcgcggt gtaggatact ttttcaatac gggtttgggc aggggctgcc
    52081 tgcgccaggc ggagtacctg tcctttttgg atggtgttgc ctttgatgtt gttggcgaca
    52141 atcaggtcgg ctacgctgac gttgtagcgt ttggcaatgt tgaacagggt gtcgccttct
    52201 acaacgcggt ggatgctggc atggagcggg gagatttcgg cttcgccgtc ggcagctttg
    52261 gctacgcgcg tttccaaacg tgcccggcgt ttgccgtcgg cggcaacggt atgttgcgga
    52321 gatgaggaaa tgttgtgttc ggcaactgtg tcaggcgtgc cgatgacggc ggagatggtt
    52381 tcttcagcct gtcggcgcag gttgtttcgg gcaacaagct gcatgagttc gtctgccgcc
    52441 tgcatgtcgt tttgggggat gatctgcgcg agtgttgcgg tttgggtttc agacggcatg
    52501 gcggtctgtt tttcggtttg aggttgcgct gcggctgtcg caagggcagg ttcg
//
LOCUS       DBBZXW010000004        45727 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.004, whole genome shotgun sequence.
ACCESSION   DBBZXW010000004 DBBZXW010000000
VERSION     DBBZXW010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 45727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.004"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(354..776)
                     /locus_tag="ACJJD2_000215"
     CDS             complement(354..776)
                     /locus_tag="ACJJD2_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HGG7578842.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGKAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(894..1565)
                     /locus_tag="ACJJD2_000216"
     CDS             complement(894..1565)
                     /locus_tag="ACJJD2_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HGG7578843.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QSAKP"
     gene            complement(1581..2207)
                     /gene="purN"
                     /locus_tag="ACJJD2_000217"
     CDS             complement(1581..2207)
                     /gene="purN"
                     /locus_tag="ACJJD2_000217"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HGG7578844.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AGQGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSVLPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2314..3132)
                     /locus_tag="ACJJD2_000218"
     CDS             complement(2314..3132)
                     /locus_tag="ACJJD2_000218"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7578845.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3391..3831)
                     /locus_tag="ACJJD2_000219"
     CDS             complement(3391..3831)
                     /locus_tag="ACJJD2_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HGG7578846.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3894..5300)
                     /locus_tag="ACJJD2_000220"
     CDS             complement(3894..5300)
                     /locus_tag="ACJJD2_000220"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HGG7578847.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5470..6585
                     /gene="lptF"
                     /locus_tag="ACJJD2_000221"
     CDS             5470..6585
                     /gene="lptF"
                     /locus_tag="ACJJD2_000221"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HGG7578848.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6582..7652
                     /gene="lptG"
                     /locus_tag="ACJJD2_000222"
     CDS             6582..7652
                     /gene="lptG"
                     /locus_tag="ACJJD2_000222"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HGG7578849.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELIPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7952..10537
                     /gene="acnB"
                     /locus_tag="ACJJD2_000223"
     CDS             7952..10537
                     /gene="acnB"
                     /locus_tag="ACJJD2_000223"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HGG7578850.1"
                     /translation="MLEAYRKAAAERAALGIPALPLTAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10679..11674
                     /locus_tag="ACJJD2_000224"
     CDS             10679..11674
                     /locus_tag="ACJJD2_000224"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HGG7578851.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(11897..12910)
                     /gene="ilvC"
                     /locus_tag="ACJJD2_000225"
     CDS             complement(11897..12910)
                     /gene="ilvC"
                     /locus_tag="ACJJD2_000225"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HGG7578852.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRTDLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(12990..13283)
                     /locus_tag="ACJJD2_000226"
     CDS             complement(12990..13283)
                     /locus_tag="ACJJD2_000226"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HGG7578853.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            complement(13350..13841)
                     /gene="ilvN"
                     /locus_tag="ACJJD2_000227"
     CDS             complement(13350..13841)
                     /gene="ilvN"
                     /locus_tag="ACJJD2_000227"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HGG7578854.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            complement(13852..15579)
                     /gene="ilvB"
                     /locus_tag="ACJJD2_000228"
     CDS             complement(13852..15579)
                     /gene="ilvB"
                     /locus_tag="ACJJD2_000228"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HGG7578855.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
     gene            complement(16338..16422)
                     /locus_tag="ACJJD2_000229"
     tRNA            complement(16338..16422)
                     /locus_tag="ACJJD2_000229"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16386..16388),aa:Leu,seq:caa)
     gene            16699..17352
                     /locus_tag="ACJJD2_000230"
     CDS             16699..17352
                     /locus_tag="ACJJD2_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HGG7578856.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            17431..18084
                     /gene="hisG"
                     /locus_tag="ACJJD2_000231"
     CDS             17431..18084
                     /gene="hisG"
                     /locus_tag="ACJJD2_000231"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HGG7578857.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            18188..19087
                     /locus_tag="ACJJD2_000232"
     CDS             18188..19087
                     /locus_tag="ACJJD2_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HGG7578858.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            19084..20373
                     /gene="hisD"
                     /locus_tag="ACJJD2_000233"
     CDS             19084..20373
                     /gene="hisD"
                     /locus_tag="ACJJD2_000233"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HGG7578859.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            20419..21516
                     /gene="hisC"
                     /locus_tag="ACJJD2_000234"
     CDS             20419..21516
                     /gene="hisC"
                     /locus_tag="ACJJD2_000234"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HGG7578860.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            21513..22430
                     /gene="hisB"
                     /locus_tag="ACJJD2_000235"
     CDS             21513..22430
                     /gene="hisB"
                     /locus_tag="ACJJD2_000235"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HGG7578861.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            22525..23394
                     /locus_tag="ACJJD2_000236"
     CDS             22525..23394
                     /locus_tag="ACJJD2_000236"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HGG7578862.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            23481..24347
                     /locus_tag="ACJJD2_000237"
     CDS             23481..24347
                     /locus_tag="ACJJD2_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HGG7578863.1"
                     /translation="MWKMLKHIAQTHRKRLIGTFSLVGLENLLMLVYPVFGGRAINAV
                     IAGGVWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAV
                     TARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLP
                     RFAAISENLYFRLKNSLECDNHFIRKGDRRQLDRHYGLVARLRVLISNREAFGYLCVG
                     AAMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQR
                     IEWSERNIKAGT"
     gene            complement(24398..25450)
                     /gene="sohB"
                     /locus_tag="ACJJD2_000238"
     CDS             complement(24398..25450)
                     /gene="sohB"
                     /locus_tag="ACJJD2_000238"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HGG7578864.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(25554..25643)
                     /locus_tag="ACJJD2_000239"
     tRNA            complement(25554..25643)
                     /locus_tag="ACJJD2_000239"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25607..25609),aa:Leu,seq:taa)
     gene            complement(25746..25819)
                     /locus_tag="ACJJD2_000240"
     tRNA            complement(25746..25819)
                     /locus_tag="ACJJD2_000240"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25785..25787),aa:Cys,seq:gca)
     gene            complement(25846..25921)
                     /locus_tag="ACJJD2_000241"
     tRNA            complement(25846..25921)
                     /locus_tag="ACJJD2_000241"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25886..25888),aa:Gly,seq:gcc)
     gene            complement(25943..26018)
                     /locus_tag="ACJJD2_000242"
     tRNA            complement(25943..26018)
                     /locus_tag="ACJJD2_000242"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25983..25985),aa:Gly,seq:gcc)
     gene            complement(26042..26117)
                     /locus_tag="ACJJD2_000243"
     tRNA            complement(26042..26117)
                     /locus_tag="ACJJD2_000243"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26082..26084),aa:Gly,seq:gcc)
     gene            complement(26143..26218)
                     /locus_tag="ACJJD2_000244"
     tRNA            complement(26143..26218)
                     /locus_tag="ACJJD2_000244"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26183..26185),aa:Gly,seq:gcc)
     gene            complement(26298..26861)
                     /gene="pgsA"
                     /locus_tag="ACJJD2_000245"
     CDS             complement(26298..26861)
                     /gene="pgsA"
                     /locus_tag="ACJJD2_000245"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HGG7578865.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            complement(26967..27390)
                     /locus_tag="ACJJD2_000246"
                     /pseudo
     CDS             complement(26967..27390)
                     /locus_tag="ACJJD2_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(27430..27540)
                     /locus_tag="ACJJD2_000247"
                     /pseudo
     CDS             complement(27430..27540)
                     /locus_tag="ACJJD2_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(27673..28008)
                     /locus_tag="ACJJD2_000248"
     CDS             complement(27673..28008)
                     /locus_tag="ACJJD2_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HGG7578866.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            28137..29042
                     /locus_tag="ACJJD2_000249"
     CDS             28137..29042
                     /locus_tag="ACJJD2_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HGG7578867.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGNGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     MVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(29104..29592)
                     /locus_tag="ACJJD2_000250"
     CDS             complement(29104..29592)
                     /locus_tag="ACJJD2_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HGG7578868.1"
                     /translation="MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            29739..30641
                     /locus_tag="ACJJD2_000251"
     CDS             29739..30641
                     /locus_tag="ACJJD2_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7578869.1"
                     /translation="MDTAKKDILGSGWMLVAAVCFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(30682..31812)
                     /locus_tag="ACJJD2_000252"
     CDS             complement(30682..31812)
                     /locus_tag="ACJJD2_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7578870.1"
                     /translation="MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            32017..34986
                     /gene="alaS"
                     /locus_tag="ACJJD2_000253"
                     /pseudo
     CDS             32017..34986
                     /gene="alaS"
                     /locus_tag="ACJJD2_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343549.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
     gene            complement(35074..36096)
                     /locus_tag="ACJJD2_000254"
     CDS             complement(35074..36096)
                     /locus_tag="ACJJD2_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HGG7578871.1"
                     /translation="MLTKKEFEKFLDEVCTVLRQEAKNAPFKSQDIFENRVRALCIAK
                     IPAYADIVINPEPVPQIFPDVPIGEYGVEVKFTLKDTWRSVANSIQEKNKADGVQHIY
                     VIFGKMGGIPDVKWQLYEDSVIHVRTSHVPRFEVEIESDRPSLFEGFGISYAEFADLD
                     MHEKMEYIRKYARNRLKEGERLWWIEDIDAVDSHDLPLEVRLYTSLPQEEKIRLRAEA
                     ALVSPRIVCSGRAKHKYDNAVLYLITYRGVLCHQARDLFSAGSVANSAEDYRGGNYVE
                     KSLKLIEHEIEKAALEMDDALIVEYWGESVPTEKRLEYWIKMLDDLADGWIPSESLFN
                     GRYKAK"
     gene            complement(36150..37301)
                     /locus_tag="ACJJD2_000255"
     CDS             complement(36150..37301)
                     /locus_tag="ACJJD2_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7578872.1"
                     /translation="MTEFARKNWNKLAGDAIKAKMHEHGIGFIQLSELFLEQGESETA
                     NAICNKVNRGTFSHAFYLKCMELMTKQEKQEDREKKYKIISLFSGCGGMDLGFLGGFE
                     FLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGDIWQHLDEIPTSADIIIGGF
                     PCQDISINGKGAGISGSRSGLYKAMLSAVERVRPKIFVAENVKGLLMKHHRKDLETVL
                     SDFRNLGYQVDYYLLNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQA
                     IGDLVDKVEDEIANHIWSRAEKSPDQGSRKLDAERAGYTIRAECHGNIQWHYELPRRI
                     SMREAARIQSFPDNFIFQAKLRATERQIGNAVPPVLGWHIAAAVSKALK"
     gene            37924..38154
                     /locus_tag="ACJJD2_000256"
     CDS             37924..38154
                     /locus_tag="ACJJD2_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578873.1"
                     /translation="MFKTLKSIWQGLTQKGKIFPYQLAFTLLIPLRNWALSPQQITQR
                     LHFVPHHRICCGAGYFSCVGCASAHRFLIFAC"
     gene            38395..39339
                     /gene="tehA"
                     /locus_tag="ACJJD2_000257"
     CDS             38395..39339
                     /gene="tehA"
                     /locus_tag="ACJJD2_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HGG7578874.1"
                     /translation="MSASKKFPIPLSYFSIALGLFALGLSWRYGASVGLLPALAAESL
                     LAVASVVWLLLVAAYLIKMFAYRNDFLSDLRDLVQCCFISAIPITAMLEGLALKPYQA
                     GAAAVLIYVGVAGQLAFSMYRAAGLWRGLHSLEATTPIIYLPTVATNFVSASSLAALG
                     HHDYAALFFGAGMFSWLSLEASILGRLRTAAPVGTAARGVVGIQLAPAFVGCGAYFAV
                     GGKVDGFALALIGYGCLQLLFLLRLTRWFWEGGFTMSFWGFSFGFAAMAGCGLHLAAS
                     GILSGLGLTLATAGSAGVALLLVGTLHRIATGRFLVRG"
     gene            complement(39413..40096)
                     /locus_tag="ACJJD2_000258"
     CDS             complement(39413..40096)
                     /locus_tag="ACJJD2_000258"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HGG7578875.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVIPDGENLKVTLDRVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVLEKFYL"
     gene            40394..42697
                     /gene="parC"
                     /locus_tag="ACJJD2_000259"
     CDS             40394..42697
                     /gene="parC"
                     /locus_tag="ACJJD2_000259"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HGG7578876.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNSAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            42718..44309
                     /locus_tag="ACJJD2_000260"
                     /pseudo
     CDS             42718..44309
                     /locus_tag="ACJJD2_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237220.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
     gene            44302..44769
                     /locus_tag="ACJJD2_000261"
     CDS             44302..44769
                     /locus_tag="ACJJD2_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004518841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7578877.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQADKRLGISFRSMRYRMERLNIG"
     gene            44873..45625
                     /locus_tag="ACJJD2_000262"
     CDS             44873..45625
                     /locus_tag="ACJJD2_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7578878.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLTEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAKPTVWDATAGLGRDSFVLA
                     SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEAVLLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYEADKG"
BASE COUNT        11100 a        12612 c        11261 g        10754 t
ORIGIN      
        1 aaggcgaggc aacgccgtac tggtttttgt taatccacta taattcaata aattaatata
       61 tggcttaaaa taacgggatg cccgcctccc gtcctcctgc agaagcgggc gggtatcatt
      121 ttaaaacgcg gcatttaaaa tttgaccgaa aattgttgac aatccggaat caagtctgca
      181 caataccccg acaagtccaa gtattataaa ggctgaataa agaggaaaca gcaggcagat
      241 atattcggga ggtgcagtcc gaatatatct gcttttttat gcgcctccgg attgcctgcc
      301 gcacctttcc cttcagacgg catcagccgt ttccccataa tgccgcccga tgcctattta
      361 tctgccccgg caatttcaaa actgtgggta atctttgccg ctttgcccaa cataatcgaa
      421 gccgaacagt atttttcggc agacatctga acggcgcgct caatggccga ttctttcaaa
      481 tcatgcccga atactttgaa atggatgtgg atttcggtaa acacgcgcgg cgcatcgtcc
      541 gcccgtttcg ccgtaaccgt cgcacggcag tcagtcactt tctgacgctg tttttcggca
      601 atcatcacca catcgatgct cgaacagccc gccacgccca acagcagcat ttccaaaggg
      661 ctgggcccgc gcttagcctt accttctgcc gccgacccct ccataacgac gctgtgcccg
      721 ccttccgttg ttccgacaaa gcacattccg tctatccatt ttgatgtaac ctgcatggtg
      781 tcattcctga aaatagcgtt aaaaccgctt tgcatatggc gttattgtaa acaatttcaa
      841 gcggcttatg cagaaatatg gacaaaacgg caaaaaaacg cctgaaaatc gatttacggt
      901 ttggcggact ggccattgat ctgcaccgat ttgagtttca gcgtataggt tttgccgtcg
      961 tcggtatagc cgatttgtgc cggaatattg ttcagggacg gtgcgaagaa atacattacc
     1021 gtatcgtcgc cgcgccgcac ccgatatttg acgacttcgg tttccacgcc gcctatgctg
     1081 tattttcctg tacccgcctt attcaaaccg ccgacggaat aaagtttttt gccgttggtg
     1141 attttcagcc ccggggggag tttcgcgtca tttgccgcca actgccaggc aagcgtgaac
     1201 aaatccatag ccttggggct ttgctcggtt ttgctctcgc ccgctttgcc gtaggttacg
     1261 ctgccgtcgg cgaatttggc ttccgcatac agtttgcccc tgcgtatgtc tctatagtag
     1321 gtagggtgca gggtattgcc gacaaccgta ccgccggact cgaaacggat attgtatagc
     1381 ggcactttaa tcgtcgaaac gattttgtaa gcattgccgc tgcgttcaaa tgtcatcgtg
     1441 gcgggaatgc cgtagctgcc ggaatagtgc agcacggcgg attggggcag ccctgccgca
     1501 tacgcgcacg gcagggcggc ggacaaaatg gcggcggaaa atatattttt aaaagtcttc
     1561 atcatttgct cccgcccggt ttacgccgtc aggaaacggg cggcatcggc gttttccgaa
     1621 tttctgacgc ggtttccctc gataatcagg cggccggcgg caaaatcggc aacggctttc
     1681 ggatagagtt tgtgttcgac agccaaaacc cgggcggcaa catcgtctgc cgtatcgccg
     1741 tcgagtatcg gcacaatccc ttgcgataca atcgggccgc aatccagttc ggcagtaacg
     1801 aaatggatgg tgcagccggc aacgcggcag cccgcctcca aagcgcgttc gtgcgtatga
     1861 agtccggtaa acgagggcag gacggacggg tgaatgttca tcagcctgcc ttcgtaatgg
     1921 gcgcaaaact caggggtcag aatccgcata aaacctgcca aaaccaccaa gtcgggttga
     1981 tatgcgtcga ttttttccat catggcggta tcgaaggcaa gtcgtgattc aaagttttta
     2041 tgattcaggc tgtcggtcgg aataccctga ccggccgccc attgcaaacc ggcagccgtt
     2101 tcgctgttgc tcaacacggc ggcaatacgg acgttgggaa tggcggcatt gacgattgcc
     2161 tgcatattgc tgccgcgtcc ggaaatcagg atgacgatgt ttttcataat ggtgcgcttt
     2221 tgaaagggat gccatctgaa ccgctgtttg gtggtttcag acggcatttg ccgtaaaaat
     2281 gcccgaaaac ctgtttcggg catggattcg gacttaattt acttttttga tgtcgacttg
     2341 agccggctgc ttggcgggcg cgttttcggg tgcgccgatt ttgaccagtt tcacatcaaa
     2401 taccaaagtg gcgttcggac cgattttgtc gcccgcaccc tgttcgcggt aggcaaggtt
     2461 ggacgggatg tagaacgtgg cttcgccgcc ttctttcaga agctgtacgc cttcggtcca
     2521 acccggaatc acttggctca aagggaaggt gaccgggccg ccgttggctt tgctgctgtc
     2581 gaataccgta ccgtcaatca ggcggccttc gtattccacg gtaacgatgt cgtctttggt
     2641 cggctgtttg ccttcaccct gtttggtgat tttgtattgc aggccggaag cagtggtctt
     2701 cacgccgtct ttggcggcat tttctttcag aaaggcttcg cctttttctt tattggcctt
     2761 cgcgtccgcc ttgtgttttt ctacggcttt agcctgttgt tcctgaagga atttcatcat
     2821 gacttcctga gcctgctctt cggtcatttt gatttctttg ccgtcataca ctgcctgcat
     2881 ggcttcggta aagactttca aatcgatttc cgcgccctgt tccttcattt gcttcaggga
     2941 gcgtccgatg tccacgccca tcgcatagct tgcctgctgc atcgtgctgc cgatcgaaga
     3001 ggtgtcgccc tgcgcggaag aagcggcggc aggttcggat gcagatgcgg gggcggcttc
     3061 ttttttgccg caggcggaaa gtgccaaagc ggcggaaagg gtcagtgcgc tgattttgaa
     3121 aatggtgttc atgatggatc ttcgctgtcg ataaggtcgg aaaaacggga ttatagccga
     3181 gtttgaatgt ttcaacacac aggatgacac ataaagcgtc aatcgtgtgt tgccctgttt
     3241 tggaaaggat tgaaccttcc aaaataagtt ttgattctac cgccccgagg gacagatgtc
     3301 caagtggcgg ggttcaaccg ataaggaaat tttaatcaaa tagaatcaag cctgtttaaa
     3361 ttttgtaaat gcggcatttc agacggcatt ttatgccttg ccctccatgc cgtgatgttc
     3421 gatggcaaaa ccgcttcggc ggtaggcggt aaagcgttcg cgcgcgtcgg cgagatcttc
     3481 caagctgttg ccgacgattt ccaaaacgcg cgcgggcaag accggagcgg tgttccaaaa
     3541 accgtcggac aggttcaaaa cagtcatgcc ttcgggaatt cggggcggat tgccgccgca
     3601 agcaagcagg acggatgttt cagacggcat ggcttcttcc atttcccaaa tttcgtgcgg
     3661 aataaaactc tcggcctcgt attgccaaag cattttgtcc aattcctgaa gctgcccgaa
     3721 cgaatcggac cacaccagta tcctgccgcc gtcccgaatc gcacgggcaa tcaggcggca
     3781 ggtgaaaatc ggaacttggg caacgtgcgt gtaaaaggtg gctttcggca tattgtttga
     3841 gcatttggca ggacgatgcc gtctgaaagg cttcagacgg cattgtggca aaattaaaga
     3901 ttccgcagat agttcagcag caagggaacg ggacggccag tcgcaccttt ttccgctccg
     3961 gatttccacg ccgtacccgc gatgtcaagg tgcgcccacg ggtagccttc ggtgaagtaa
     4021 gacaggaatg ttgcggcggt aatcgtgccc gcgccgggcg tgccgatgtt tggaatgtcg
     4081 gcaaagttgg atttgagttg gtctttgtag gtctcaaaga gcggcagttg ccatgctttg
     4141 tcgtccacgt tgtaggaagc ggcaagcagg ctgtcgatca aatcctgatt gttgcccatc
     4201 acgccgctga catcgtgccc caaggcaaca atacacgcgc cggtcagggt ggcgacgtcg
     4261 atgacggctt tgggtttgaa ctgctcggcg taagtgagcg cgtcgcacaa aatcagacgg
     4321 ccttcggcat cggtgttcaa cacttcgatg gtcagacctt tcatactttt cacgacatcg
     4381 cccggtttgt ttgccgcgcc ggaaggcata ttttcacaag tggcgacgac ggcaatcagg
     4441 ttaatcggca gttgcagttt gacggcggcg cagaaggtgc tgatgacggt tgccgcgccg
     4501 cacatatcaa acttcatttc gtccatgttc aggccgggct tgagggagat gccgccggtg
     4561 tcgaaggtaa tgcctttgcc gaccaatacc acaggcgcgg cttctttgtc ggctgcaccg
     4621 aaatagctca gttcgaccaa atagggggct tccgcgctgc ctttggcgac cgaccaaaac
     4681 gaacccatgt tttctttgat gtagtctttt tcgatgattt tggcgtgcgc gcccagtttt
     4741 tcggcttcgg ctttggcggt gcgcgctaaa aattcgggcg tgcattcgtt gggcgcggcg
     4801 ttgcccaagt cgcggcagag gctttgtccg taaacttgcg cttcggcgac gcgcaaggct
     4861 tctttaacga cggcttcgtg tgcgctgtgg aacacggcgg tttcaaattt ggcgggcttg
     4921 gcttcttttt tgtagcggtc gaaacggtag gcggcgttgc cgaacgcaat cgcaaacgct
     4981 tcggctacgg cggcggcttg cgcttcatcg aaggcatgga tgtccacatt gaccgtttcc
     5041 tgattttgcg cccatttggc ggcttcggcg gcggccttgt tcaatgcggc gcggccggtg
     5101 cttttcagac agcatacggc aacagcctgc aaaccgttgc ctgtcgggat ttttgtgtcg
     5161 gcaaaatttt gaccttcttc aagcgaagac aaaagggcaa gggcggtcgg atggtttaat
     5221 tgcgcctctt cggtgcagac aaataactgt gcgcctgcct gctgttcctg caagatttcg
     5281 gtttttgtgc taaattccac gtttattctc ctgattgaga cggttgtcgg tagttttcgg
     5341 acggcctttc gctcaaaaga ccgtctgaag acggctggca cgattgtacc ccatttgaag
     5401 caccgtctga aaccttgcgc ggacaatccg cctgcgccga accgcttacc gccccctgac
     5461 cgcgattcta tgatttatca aagaaacctc atcaaagaac tctcttttac cgccgtcggc
     5521 attttcgtcg tcctcttggc ggtattggtc tccacgcagg caatcaacct gctcggccgt
     5581 gccgccgacg ggcgtgtcgc catcgatgcc gtgttggcat tggtcggctt ctgggtcatc
     5641 ggtatgacgc cgcttttgct ggtgttgacc gcatttatca gtacgttgac cgtgttgacc
     5701 cgctactggc gcgacagcga aatgtcggtc tggctatcct gcggattggc attgaaacaa
     5761 tggatacgcc cggtgatgca gtttgccgtg ccgtttgccg ttttggttgc cgtcatgcag
     5821 ctttgggtga taccgtgggc agagctacgc agccgcgaat acgctgaaat cctgaagcag
     5881 aagcaggaat tgtctttggt ggaggcaggc gggttcaaca gtttgggcaa gcgcaacggc
     5941 agggtttatt ttgtcgaaac cttcgatacc gaatccggca tcatgaaaaa cctgttcctg
     6001 cgcgaacagg acaaaaacgg cggcgacaac atcatcttcg ccaaagaagg taacttctcg
     6061 ctgaacgaca acaaacgcac gctcgaattg cgccacggct accgttacag cggcacgccc
     6121 ggacgcgccg actacaatca ggtttccttc caaaaactca acctgattat cagcaccacg
     6181 ccaaaactca tcgaccccgt ttcccaccgc cgtaccattc cgaccgccca actgattggc
     6241 agcagcaacc cgcaacatca ggcggaattg atgtggcgca tctcgctgac cgtcagcgtc
     6301 ctcctactct gcctgcttgc cgtgccgctt tcctatttca acccgcgcag cggacatacc
     6361 tacaatatct tgattgccat cggtttgttt ttaatttacc aaaacgggct gaccctgctt
     6421 tttgaagccg tggaagacgg caaaatccat ttttggctcg gactgctgcc tatgcacatc
     6481 atcatgttcg tcatcgcaat cgtacttctg cgcgtccgca gcatgcccag ccagcccttc
     6541 tggcaggcgg ttggcaaaag tctgacattg aaaggcggaa aatgaacctg atttcacgtt
     6601 acatcatccg tcaaatggcg gttatggcgg tttacgcgct ccttgccttc ctcgctttgt
     6661 acagcttttt tgaaatcctg tacgaaaccg gcaacctcgg caaaggcagt tacggcatat
     6721 gggaaatgct gggctacacc gccctcaaaa tgcccgcccg cgcctacgaa ctgattcccc
     6781 tcgccgtcct tatcggcgga ctggtctccc tcagccagct tgccgccggc agcgaactga
     6841 ccgtcatcaa agccagcggc atgagcacca aaaagctgct gttgattctg tcgcagttcg
     6901 gttttatttt tgctattgcc accgtcgcgc tcggcgaatg ggttgcgccc acactgagcc
     6961 aaaaagccga aaacatcaaa gccgccgcca tcaacggcaa aatcagcacc ggcaataccg
     7021 gcctttggct gaaagaaaaa aacagcatta tcaatgtgcg cgaaatgttg cccgaccata
     7081 cgcttttggg catcaaaatt tgggcgcgca acgataaaaa cgaattggca gaggcagtgg
     7141 aagccgattc cgccgttttg aacagcgacg gcagttggca gttgaaaaac atccgccgca
     7201 gcacgcttgg cgaagacaaa gtcgaggtct ctattgcggc tgaagaaaac tggccgattt
     7261 ccgtcaaacg caacctgatg gacgtattgc tcgtcaaacc cgaccaaatg tccgtcggcg
     7321 aactgaccac ctacatccgc cacctccaaa acaacagcca aaacacccga atctacgcca
     7381 tcgcatggtg gcgcaaattg gtttaccccg ccgcagcctg ggtgatggcg ctcgtcgcct
     7441 ttgcctttac cccgcaaacc acccgccacg gcaatatggg cttaaaactc ttcggcggca
     7501 tctgtctcgg attgctgttc caccttgccg gacggctctt cgggtttacc agccaactct
     7561 acggcatccc gcccttcctc gccggcgcac tacctaccat agccttcgcc ttgctcgccg
     7621 tttggctgat acgcaaacag gaaaaacgtt gaaccaatgc cgtctgcccc ccttcggacg
     7681 gcattggttt gtattatcat attcccgtag acagatagcc gttccctatt atagtggatt
     7741 aacaaaaacc agtacggcgt tgcctcgcct tgccgtacta ttgtactgtc tgcggcttcg
     7801 tcgccttgtc ctgatttaaa atacattacc tgtcataaca gttccatttt tgttaaaact
     7861 agtctatgat agcggtacaa atattgttta caatatttaa cgcaaatcat ttgcaacccg
     7921 acaaaagaaa aacagaaaaa ggaacaaaga gatgttagaa gcctatcgta aagccgccgc
     7981 cgagcgcgcc gcccttggta ttcccgccct tcctctgact gctcagcaaa ccgccgattt
     8041 ggttgagctg ctgaaaagcc cgcccgcagg cgaaggcgag ttcttggtcg aactgcttgc
     8101 ccaccgtgtt ccgcccggtg tggacgatgc cgccaaagtc aaagcctcat tcctggctgc
     8161 cgttgccgaa ggcagcgcgt ccagcccgct gatctccccc gaatatgcga ccgaactctt
     8221 aggtacgatg ctcggcggtt acaatatcca cgccttaatc gaactcttgg acgacgacaa
     8281 actcgcgccc attgccgcca aaggcttgaa acatacgctt ctgatgttcg attccttcca
     8341 cgacgttcag gaaaaagccg aaaaaggcaa caaatacgcg caagaagttt tgcaatcttg
     8401 ggcagatgcc gaatggttcg cctcacgcgc caaagttccc gaaaaaatca ccgttaccgt
     8461 tttcaaagtt gacggcgaaa ccaatacaga cgacctctcc cccgcgcccg acgcgtggag
     8521 tcgtcccgat attccgctgc acgcgctggc catgctgaaa aacccgcgcg acggcatcac
     8581 gcccgacaaa ccgggcgaag tcggtccgat taaattgttg gaagaactca aagccaaagg
     8641 ccatccggtt gcttacgtcg gcgacgtggt cggtactggt tcttcacgca aatccgcgac
     8701 caactccgtc atttggcata ccggcgaaga cattccgttc gtgccgaaca aacgcttcgg
     8761 cggcgtatgt ttgggcggca aaatcgcgcc gattttcttc aatacccaag aagattccgg
     8821 cgcgctgccg attgaagtcg atgtatctgc tctaaaaatg ggcgatgtcg tcgatatcct
     8881 gccttatgaa ggcaaaatcg tgaaaaacgg cgagactgtt gccgagtttg aattgaaatc
     8941 acaagtattg ctggacgaag tgcaagccgg cggccgtatc aacctgatta tcggtcgagg
     9001 tctgaccgcc aaagcgcgcg aagccctgaa actgcctgcc tctactgcat tccgcctgcc
     9061 gcaagcgcct gccgaaagca aagccggttt caccttggcg caaaaaatgg tcggccgcgc
     9121 ctgcggtctg cccgaaggac aaggcgtgcg cccgggtact tactgcgaac cgcgtatgac
     9181 gacggtcggc tcgcaagaca cgaccggccc gatgacccgc gacgagttga aagacttggc
     9241 ttgtttgggc ttctccgccg atatggtgat gcagtctttc tgccacaccg ccgcctatcc
     9301 gaaacctgtc gatgtaaaaa cccataaaga actgcccgcc tttatttcca cccgtggcgg
     9361 cgtgtcactg cgtccgggcg acggcgtcat ccactcgtgg ctcaaccgcc tgctgctgcc
     9421 cgataccgtc ggcaccggcg gcgacagcca tacccgtttc cccatcggta tttccttccc
     9481 cgccggctcc ggcttggttg cctttgccgc cgcaacgggc gtaatgccgc tcgatatgcc
     9541 cgagtctgta ttggtacgct tcagcggcaa gctgcaaccg ggcgtaaccc tgcgcgattt
     9601 ggtgaacgcc atcccgctgt acgcaatcaa acaaggtttg ctgaccgttg ccaaagccgg
     9661 taagaaaaac atcttctccg gccgcatcct cgaaatcgaa ggcctgcctg atttgaaagt
     9721 ggaacaagcc tttgaattga ccgacgcatc cgccgaacgc tccgccgccg gctgtaccgt
     9781 gaagctcaac aaagagccga ttatcgagta catgaaatcc aacgtcgtgt tgatgaaaaa
     9841 catgattgcc aacggctatc aagacccgcg cactttggaa cgccgcatca aagctatgga
     9901 aaaatggctg gcaaatcccg agttgctcga agcggataaa gatgccgaat acgccgccgt
     9961 gattgaaatc aacatggacg acatcaaaga gccgattatc gcctgcccga acgacccgga
    10021 cgacgtgtgc ttcatgtccg aacgctccgg caccaaaatc gacgaagtat tcatcggttc
    10081 gtgtatgacc aacatcggcc acttccgcgc cgcctccaaa cttttggaag gcaaggcaga
    10141 cacccccgtc cgcctgtgga ttgcgccgcc gaccaaaatg gacgcgaaac aattgtccga
    10201 cgaaggacac tacggcgtac tcggacgtgc cggcgcgcgt atggaaatgc cgggttgctc
    10261 cttatgtatg ggtaatcagg cgcaagtacg cgaaggtgcg accgttatgt ccacctccac
    10321 ccgcaacttc ccgaaccgtt tgggtaaaaa cacctttgtt tacctcggtt cggcggaatt
    10381 ggcagcgatt tgctccaaac tgggtaaaat cccgaccgtt gaagaatatc aagccaatat
    10441 cggcatcatc aacgaacagg gcgataaaat ctaccgctat atgaacttca acgaaatcga
    10501 cagctacaac gaagtagccg agaccgtgaa cgtttaatcc ccgtcatccg tatgaagtaa
    10561 gggattgacc gcaatgccgt ctgaacaacc ttcagacggc attgcaacat tccgctaacc
    10621 cttctttccg caaacgctgc aaatacggcg ttcacgcccc cacataaagg aaacgacagt
    10681 gaacctgaaa aaccgccatt ttctgaaact tttagacttc acgccggaag aaatcaccgc
    10741 ctacctcgac cttgccgccg aattgaaagc cgccaaaaaa gcagggcgcg agattcagcg
    10801 gatgaaaggg aaaaacatcg ccctgatttt tgaaaaaacc tctactcgga cgcgctgcgc
    10861 gtttgaagtc gccgcgcgcg atcaaggcgc gggagtgact tatttagagc cgtccgccag
    10921 ccaaatcggg cataaggaaa gcatcaaaga caccgcccgc gtgttgggca ggatgtacga
    10981 tgccatcgaa tatcgcggtt tcggtcagga agttgttgaa gaattggcga aatacgcggg
    11041 cgtacccgtg ttcaacgggc tgaccaacga gttccatccc acacaaatgc ttgccgacgc
    11101 actgactatg cgcgaacaca gcggcaaacc tttgaaccaa accgcgtttg cctacgtcgg
    11161 cgacgcgcgt tacaacatgg gcaattccct gctgatttta ggggcaaaat tggggatgga
    11221 cgtgcgtatc ggcgcaccgc aaagcctgtg gccgtctgaa ggcattattg ccgccgcaca
    11281 cgccgccgcc aaagaaaccg gcgcaaaaat taccctgacc gaaaacgcgc atgaagccgt
    11341 gaagaatgtt gattttattc ataccgatgt gtgggtcagc atgggcgagc cgaaagaagt
    11401 ctggcaggaa cgcatcgatt tgctgaaaga ttaccgcgtt acgcccgaac tgatggcggc
    11461 atcgggcaat ccgcaagtca aattcatgca ctgcctgccc gccttccaca accgcgaaac
    11521 caaagtcggc gaatggattt acgaaacctt cgggctgaac ggtgtggaag ttacagaaga
    11581 agtattcgaa agccccgcca gcatcgtgtt cgatcaggcg gaaaaccgta tgcacacgat
    11641 taaagcggta atggtcgcgg ctttgggcga ctgacagaac tgtgcctgtt taaattcatc
    11701 cgcaacacag ataccgtctg aacacgatgt tcagacggta tccatatata gtggattaaa
    11761 tttaaaccag tacggcgttg cctcgccttg ccgtactatt tgtactgtct gcggcttcgt
    11821 cgccttgtcc tgatttttgt taatccacta taaaaaactg cctacacgat gtgtaggcag
    11881 tcccgtttga aaacaatcag tttttgtctt ggtcaaccaa tttgttggca gtaatccaag
    11941 gcatcatggc acgcagttgt gcgccgactt tttcaacttg gtggtcggca ttcagacggc
    12001 ggcgggcagt catagacgca tagttgacat taccctcttg gataaacatt tttgcgtatt
    12061 cgccggtttg gatgcgtttc agggcattgc gcatggcttc tttgctggaa gcattgacca
    12121 cttcagggcc ggtaacgtat tcgccgtact ccgcattgtt ggaaatggag tagttcatat
    12181 tggcaatacc gccttcgaaa atcaggtcaa cgatcagttt catttcgtgc agacattcga
    12241 agtaagccat ttcaggcgcg taaccggctt cggtcagggt ttcaaaacct gctttgatca
    12301 actcgaccac gccaccgcac aatacggctt gttcgccgaa cagatcggtt tcggtttctt
    12361 cgcggaaagt ggtttcaatc acaccgcctt tggtgccgcc gttggcagcc gcataagaca
    12421 gggcgatgtc tttggccttg ccggaattgt cttggtaaac ggcaatcaga gaaggcacgc
    12481 cgccgccgcg tttgtattca ctgcgtacgg tatgacccgg acctttgggg gcaaccataa
    12541 tcacgtccaa gtcggtacgc ggaacgattt ggttgtagtg cacgttgaag ccgtgtgcaa
    12601 atgccagcgt tgcgccttct ttcaaattgg ctgtaacttc ggcgtgatag acggcaggca
    12661 tggtttcgtc aggcagcagc agcataacga catcggcttc tttggtcgct tcagcaacgg
    12721 ttttgacgac atgaccggct gcttcggctt ttttccaaga agaaccttgg cgcagaccaa
    12781 tcaccacgtt tacacccgaa tctttcaggt tggcggcatg ggcatgacct tgcgaaccgt
    12841 aaccgatgat ggcaacggtt ttgcctttga ttagggacag atcggcatct ttatcgtaat
    12901 agacttgcat ttgatttcct ttaaggtaaa tggttgtcga agccttaaaa tgttgagcgg
    12961 cttcggacgg gttaaacaga gtgtgccgct taatcggcaa cttcattcat caatacgatt
    13021 tccaacgctt cggttttgcc gtcgacggac tggacgaagg cttggaaatg cgcgctggcg
    13081 ttatgttcgt caatagctgc ttgagatttc caattttcca cgaaaacaaa acggttcggt
    13141 ttgccgattt cctgatggag atcgtagctg atgttgccct cttctgcacg gctggctttg
    13201 accagttctt taaactgtgc tgccagtgtt tctgtgtatt ccggtttgac ggtaaccagt
    13261 gcgacaattt taatgttcga cataaatctc tcctgccgtt cgtttttcag acgacattca
    13321 aataccgtgc cgtctgaaag gttacggcgt taaattttca aaatacgctc accgcgaccg
    13381 atgccggccg cgcctgtgcg tacggtttcc aaaatttggg cgcgtccgac cgtttccaaa
    13441 aaggaatcca gcttgtctgt cgagccggta atttcaatcg tatagctgcg gtcggttacg
    13501 tcgatgatgc tgccccggta gatttcggtc aagcgtaaaa attcgtcgcg gtctttgccg
    13561 gcggcacgga cttttaccaa catcagttcg cgttcgacaa aacggctttc gttcaaatcg
    13621 accactttaa tcacttcaat caatttattg agttgcttgg tgatttgttc gatgacctgc
    13681 tcgtcgccgt gggtaacgat ggtcatacgg gacagggttt tgtcttcggt cggcgcaacc
    13741 gccaaagaat cgatattgta atcgcgtgca gagaacaaac cgaccacgcg gctcatcgca
    13801 cctgattcgt tttcaatcag aacagataag atatgtcgca tttgcctctc cttacgcctt
    13861 ttcgtccgca cgcatatgcg gcggaagtac catttcgtcc aaacctttgc cgttaccgac
    13921 catgggcatc acattctgtt tctggtcggt caggaagtcg ataaacacca gcctgtcttt
    13981 ttggttcaat gcttccaaca acgcaccttc cacatcagac ttcttgtcca cgcggatgcc
    14041 gatatgaccg tatgcctcgg caagtttgac gaaatcgggc aaagaatcga aataagtttc
    14101 cgactctcgg ccgccgtaat atatttcctg ccactggcgt accataccga gataaccgtt
    14161 gttcagcgta atgacgttaa ccggaatccg atattggaaa caggtggaca gctcttggat
    14221 gttcatctgg atcgagccgt cgccggtaat acagaatacg tcttgatccg gggcggcaag
    14281 ttttgcacca atcgcataag gcagaccaac gcccatcgta cccaaaccgc cggagttgag
    14341 ccattggcgc ggacgttcga agggataata ttgagccgca aacatttgat gctgccctac
    14401 atccgatgtg atgattgccg aattgccggt aatctcggca agcttctgaa tcacatattg
    14461 tggcttgata atttcgctgc cgttgtcaaa ccacaagcaa tcgcgggaac gccattcctc
    14521 tatggttttc caccatttgc ccaaagcatc ttcagacggc acggactctt gtttttgcca
    14581 cagcgcaacc atctcggaca aaacgttttt cacgtcgccg acaatcggaa tgtccgcctt
    14641 cacgcgtttg gcgatgctgg aaggatcgac atcgatatgg ataaccttct tcgccttctc
    14701 gaaaaatttg gacggtacgg aaaccacacg gtcgtcaaaa cgcgcaccta cggcaagaac
    14761 gacatccgca ttctgcatgg caaggtttgc ctcgtaagta ccgtgcatac cgagcatacc
    14821 gaggaattgg cggtcgccgg aaggataagc gcccaagccc atcagcgtac ccgtgcacgg
    14881 agcacccgtc attcggacaa atcgggtcag ctcttcagaa gcattaccca acaccacgcc
    14941 gccgccaaaa tagacgaccg gacgtttggc agatgccaac atctgcacgg cctttttaat
    15001 ctgaccgata tgcccttgaa caaccggttg atacgaacgg ataaaaatgt cttcctgagg
    15061 atagctgaat ttcgccatcg cctgcgtaac atctttcggg acatcaacca ccacgggccc
    15121 cggtcggccg cttgcggcaa tttggaacgc ctttttaatg gtttccgcca actcattgat
    15181 gtccgtaacc aggaaattgt gtttgacgca cggacgggta atacccaccg tatcaacttc
    15241 ttggaacgca tccgtaccaa tcagggaatt gcctacctgc ccgctgatga ccaccatcgg
    15301 aatcgaatcc gtataggcag tagcaatacc ggtcagtgca ttggtaacgc ccgggccgga
    15361 tgtaaccaat gccacgccca ccttaccgct gacgcgcgca tacgcatctg ccgcgtgtac
    15421 tgccgcctgc tcgtgacggg tcagaatgtg cttgaattta ttgagttgga aaagggcatc
    15481 gtagatttcg ataaccgcac cgccgggata accgaaaacg tactcgacac cttcggcttt
    15541 gagactctgc actatgattt gcgcgcctga taactgcata acgacctctt ttatacggtt
    15601 tcaaaccaat agggacaaac cgctttgcca cagcacctgt aatgcaattc caccaagcag
    15661 cgatttaggg tacgcgcatt gggggaacac ggcaacagac ggattatcca atcaattgga
    15721 aaggaacaca gagtttgtga aaaagagtag aaacgataac gcaaaccgac agttcaatca
    15781 agaaaaatct ttcatctttt aatatttttt gaaagcagag aaattattga ttgattttaa
    15841 aagaataaaa tcaggagtac cttttttgaa agatggaaat tgttgacagt ttatgcagga
    15901 ggggcagatg tgaaaaaccc ttcttcgata tcaagaattg taaaatttac atggtttcat
    15961 cccaataaag actcgggata ttgattgaac ttgattttat ttttgatata tcaaaaatat
    16021 tcccaaccat acttcctgaa aatggctcat tgcaccggac tgtattggac ggcattgaca
    16081 gaaccaagag ggctaacaac gacttaatat attgattgta tagtggatta acaaaaatca
    16141 ggacaaggcg acgaagccgc agacagtaca aatagtacgg aaccgattca cttggtgctt
    16201 cagcacctta gagaatcgtt ctctttgagc taaggcgagg caacgccgta ctggtttaaa
    16261 tttaatccac tatatttagt tttatctatt tcattaaaca gcaatagaca aaaaaataac
    16321 cgctctaaaa gcggttgtgg tgcccagggt cggactcgaa ccgacacacc ttgcggcggg
    16381 ggattttgag tcccctgcgt ctaccaattt cgccacctgg gctggtgaag aagtcgtcat
    16441 tataatggct tttgaaattc tgtaaacctt ttttttgaaa ttattttatc tgtttttatt
    16501 ttatttttga ttttaaatag aatttttatt attttaatct tactgttctt tccgctccaa
    16561 agattctgta tgattcggca attcctgccg tgcaaacaac gtaaaaaaat actacattaa
    16621 atctgccaaa cgcgttaaga tggaaatatt caaattccgt acgaatcagg ttttgctatt
    16681 tattcttggg agattgtcat gttttccgta ccgcgttcct ttttgccggg cgttttcgta
    16741 cttgccgcgc ttgccgcctg caaacctcaa gacaacagtg cggcgcaagc cgcttcttca
    16801 agtgcatccg cgtcagctgc ggaaaatgcg gcaaagccgc aaacgcgcgg tacggatatg
    16861 cgtaaggaag acatcggcgg cgatttcacg ctgaccgacg gcgaaggcaa gcctttcagc
    16921 ctgagcgatt tgaaaggcaa ggtcgtgatt ctgtctttcg gctttacgca ctgtcccgat
    16981 gtctgcccga cagagctttt gacgtacagc gacacgttga agcagttggg cgggcaggct
    17041 aaggacgtga aagtggtgtt cgtcagcatc gatccggaac gcgacacgcc tgaaatcatc
    17101 ggcaagtatg ccaaacagtt caatccggac tttatcggtc tgacggcaac gggcgaccaa
    17161 aacctgccgg tcatcaagca gcaataccgc gtggtttctg ccaaagtcaa tcaaaaagac
    17221 gacagcgaaa actatttggt cgaccactct tccggtgcgt atctcatcga caaaaacggt
    17281 gaggttgcca ttttctcgcc ttacggaagc gagccggaaa cgattgctgc cgatgtaagg
    17341 actctgctct gataaaaccg tatgccgtct gcaccgtcgg cgcctattca gacggcatta
    17401 ttgtttcaac cgacaaagga catccacacc atgcaggata atgctttgac catcgcctta
    17461 tccaaggggc gcatttttga ggagacgctg ccgctgcttg ccgctgccgg cattgttccg
    17521 actgaagagc ctgaaaaatc gcgcaagctg attatcggga cgaaccatga aaacatccgc
    17581 cttgtcattg tccgcgcaac cgatgtgccg acttatgtcc gctacggcgc ggcggacttc
    17641 ggcattgcgg gcaaagacgt gctgatcgaa cacggcggca cggggcttta ccggcctttg
    17701 gatttggaga ttgccaagtg ccgcatgatg gttgctgtgc gtaaagggtt tgattacgaa
    17761 gcagcttcgc aacccggatg ccgtctgaag attgccacga agtatcctga aatcgcggca
    17821 tctcattttg ccggcaaggg tgtccatgtg gacattatca aactgtacgg ctcgatggaa
    17881 cttgcgccgc tggtcggctt gagcgatgcg attgtggact tggtttcgac gggcaacacc
    17941 ttgaaggcaa acggcttgga agcagtcgaa cacatcgtcg acatttccag ccgcctggtg
    18001 gtcaacaagg ctgctttgaa aacgaaatac gcgctgctgg agccgattat tcaggcgttc
    18061 ggcggcgcag tgaaggcgaa gtaagcatcc atttgaataa agatgcgttt tcagacgacc
    18121 ctatccgttc ccgccgacag gtcgtctgaa aatatcaccg gcagtaaact gtataggaga
    18181 agttaaaatg gttgcaaaaa taaaaaaatt ctcagattca accctttccg ttttgaataa
    18241 cggcgagcgt cggttttatg tctattgtct gaccgacctg aaaaaagaca aaatcctcta
    18301 catcggcaaa ggctgcggta atcgtatctt cgagcatgaa tgggttgcta gtcgttcaca
    18361 agacccagtc tccggcgaga ttatcgatcg gaaactcaaa gccatctcca aatgcaagaa
    18421 actcggtcgc tatatcatca gctatcatct gactgaagtc gaagcactcg ccgccgaatc
    18481 tgccttaatt cattttgtta aatctgtctt gggtaaaaaa ctcaaaaata aaattgccgg
    18541 gcatggtccg ggtggtatta gcgtagaaga actagatcgc cgctttggat tctcttctct
    18601 cccacttaac gagattaacc ccgacgggct gattctcgcc atcaaaatcc acaatgcttt
    18661 cgatttagat actgacgaag aattagacta ccttttcgac aaccaagacg atgccaacct
    18721 caaatcgcgt acgttgggca actgggttat cggtaaagat gttgcttcaa aagtgaaata
    18781 cgttatcggc gttcacaccg gtctgcaaaa cgctgttgtc agtgcatacg aagtggacgg
    18841 ttttgaaaca atggttgagg aaaccaaaaa cggtagaaaa caatcccgtt accgtttccg
    18901 cactacctct cgtagcgaag aggtattagc caaactcggt ctgcaacaaa aatgcctgcc
    18961 cgaattgaag tttggtagcg ggggagaaaa agcgtatatc agacccaaaa cagagacaga
    19021 aactgaacaa gagaatattc agacgacccc caatccaaaa ataaaaaagg aaaaaaccaa
    19081 atcatgaaaa aactcaacac ccaatcgccc gatttccaag ccggactcaa agccctgctg
    19141 gcttttgaaa ccgcgcaaaa ccccgaaacc gaacgcatcg tcgccgacat ttgcgccgac
    19201 gtgcaaaagc gcggcgatgc ggctttgatt gaatacacca acaaattcga tcagacaaac
    19261 gctaaaagca tcgatgattt aatactcacg caagccgatt tgaacgcggc gttcgagcgc
    19321 attccgaacg acgttcagac ggcattgcag accgccgccc gccgtgtcga aagctaccac
    19381 caacgccaaa aaatggaatc gtggagctac accgatgaag acggcacgct gttgggacaa
    19441 cagattaccc cgcttgaccg cgtcggcatt tacgtccccg gcggcaaggc ggcatatccg
    19501 agttccgtca tcatgaacgc catgcccgcc cacgtcgcag gcgtgaaaga aatcatcatg
    19561 gtcgtgccga caccgaaagg cgaacgcaac gacatcgtgc ttgccgccgc atacgtcgcc
    19621 ggcgtaacca aagtcttcac cgtcggcggc gcgcaggcgg ttgccgccct cgcctacggc
    19681 acggaaacca tcccccaagt cgataaaatc accggtccgg gcaacgcctt cgtcgccgcc
    19741 gccaaacgcc gcgtgttcgg cgtggtcggc atcgacatgg tggcggggcc gtctgaaatc
    19801 ctggtcatcg ccgacggcac gacacctgcc gattgggtgg cgatggattt gttcagccag
    19861 gccgaacacg acgaaattgc ccaagccatc ctcatcggca cgtcgcaagc gtatctcgac
    19921 gaagtagaag ccgctatgga ccgcctgatc gaaactatgc cgcgccgcga catcatcgaa
    19981 gcctcgctcg gcaacagggg cgcgatgata ctcgccaaag acttggacga agcctgcgaa
    20041 atcgccaact acatttcccc cgaacacttg gaactgtcag tcgaaaatcc gcaggaatgg
    20101 gcgaaaaaaa tccgccacgc cggtgcgatt ttcatgggac gctacaccgg cgaaagcctc
    20161 ggcgactact gcgccggtcc aaaccatgta ttgcccacca gccgaaccgc ccgcttttcc
    20221 tcgcctttgg ggacatatga tttccaaaaa cgctccagcc tgattcaggt ttcggaacag
    20281 ggcgcgcaaa aattaggcga aaccgccagc gtgctggcac acggcgaaag cctgaccgcc
    20341 cacgcccgcg cggcagagtt ccgtatgaaa taatgccgaa acggcgtaca ggcatattcc
    20401 aaccattaag gaaacacgat gaaatccgtc cgctccttca tccgcgacga catacaagct
    20461 atgtcggcat atcagattgc cgacgttccg cccggctttg ccaaactcga ttcgatggaa
    20521 agtcccgtcc acccttttgc cggacatgaa acgctgttgc aggaatggca ggcacggctt
    20581 gccgccgcgc ccatccatct ttaccccaat ccctccggca gcggtttaca ggaagcatta
    20641 cgttcggcgt tcgacattcc cgactgcgcc gacatcgcgc tgggcaacgg ctcggacgag
    20701 ctgatacagt tcatcacgat gctgaccgcc aaaccgggcg cggcaatgtt ggcagccgaa
    20761 cccagtttcg tcatgtaccg ccacaacgcc gcgctgtacg gcatggatta tgtcggcgtt
    20821 ccactgaacg gagatttcac cctcaacctg cccgccgtcc tcgaagccgt caggaagcac
    20881 cgccctgccc tgacctttat cgcctacccc aacaacccca ccggcgtatg tttcacgcgt
    20941 gccgaaatcg aagccgtcat cgaagcttca gacggcatcg tcgtcgtcga cgaagcctac
    21001 ggcgcattca acggcgacag cttcctgccg caggcgggca gcattcccaa cctcatcgtc
    21061 atgcgtaccg tcagcaaaat cggttttgcc ggactgcgta tcggctatgc ggcaggctgt
    21121 cccgaagtca tcggcgaact gcaaaaaatc ctgccgccct acaatatgaa ccaactgagc
    21181 ctgaccaccg ccaaactcgc cctgcaacac tacggcatca tctctgccaa catcgacagc
    21241 ctgaaaaacg aacgcgaacg gatgttcgcc gaattgggca aaatatgccg tctgaacacc
    21301 tttccaagtc aggcaaactt cattaccata cgcgtacccg atgccgattt gttgtttgac
    21361 acgctcaaac aaaaccgcat cttggttaaa aaactgcatg gcgcgcaccc gcttttggaa
    21421 cactgcctgc gcattaccgt aggcagcccc gcacaaaacg atgccgttct caacatcatt
    21481 cgccaacttt actgccaacc aacggatttc ctatgaattt gactaaaaca caacgccaac
    21541 tgcacaactt tctgaccctc gcccaagaag caggttcgct gtccaagctc gccaaactct
    21601 gcggctaccg tacccccgtc gcactctaca aactcaaaca acgccttgaa aagcaggcag
    21661 aagacccaga tgcacgcggc atccgtccca gcctgatggc aaaactcgaa aaacacaccg
    21721 gcaaacccaa aggctggctc gacagaaaac accgcgaacg cactgtcccc gaaaccgccg
    21781 cagaaagcac cggaactgcc gaaacccaaa ttgccgaaac cgcatctgct gccggctgcc
    21841 gcagcgttac cgtcaaccgc aatacctgcg aaacccaaat caccgtctcc atcaacctcg
    21901 acggcagcgg caaaagcagg ctggataccg gcgtaccctt cctcgaacac atgatcgatc
    21961 aaatcgcccg ccacggcatg attgacatcg acatcagctg caaaggcgac ctgcacatcg
    22021 acgaccacca caccgccgaa gacatcggca tcacactcgg acaagcaatc cggcaggcac
    22081 tcggcgacaa aaaaggcatc cgccgttacg gacattccta cgtcccgctc gacgaagccc
    22141 tcagccgcgt cgtcatcgac ctttccggcc gccccggact cgtgtacaac atcgaattta
    22201 cccgcgcact aatcggacgt ttcgatgtcg atttgtttga agaatttttc cacggcatcg
    22261 tcaaccacag tatgatgacc ctgcacatcg acaacctcag cggcaaaaac gcccaccatc
    22321 aggcggaaac cgtattcaaa gccttcgggc gcgccctgcg tatggcagtc gaacacgacc
    22381 cgcgcatggc aggacagacc ccctcgacca aaggcacgct gaccgcataa aaaaccatac
    22441 cgtctgaaac acccgcaggc ttttcagacg gtatcggaac agataagatt acactacact
    22501 acaaacagaa aaggagtaaa catcatgtcc gcaaacgaat acacacaaat cggctggata
    22561 ggcttagggc aaatgggtct gcctatggta acgcggctct tggacggcgg catcgaagtc
    22621 ggcgtataca accgctcgcc cgacaaaact gcccccatct ccgccaaagg cgcaaaagtt
    22681 tacggcaaca ccgccgaact cgtccgcgac tatcccgtca ttttcctgat ggtttccgac
    22741 tatgccgccg tgtgcgacat cctgaacgga gtccgcgacg gattggccgg caaaatcatc
    22801 gtcaacatga gcaccatctc cccgaccgaa aacctcgccg tcaaagcact tgtcgaagcc
    22861 gcaggcggac agtttgccga agcacccgtt tccggatcgg tcgggcccgc caccaacggc
    22921 acgctgctga ttctgttcgg cggcagcgaa gccgttttaa acccgctgca aaaaatattt
    22981 tccctcgtcg gcaaaaaaac cttccatttc ggcgatgtcg gcaaaggttc gggcgcgaaa
    23041 ctcgtcttga actcgctctt gggcattttc ggcgaagcgt acagcgaagc gatgctgatg
    23101 gcgcggcagt tcggcatcga taccgacacc atcgtcgaag ccatcggcgg ctcggcaatg
    23161 gactcgccca tgttccaaac caaaaaatcc ctgtgggcaa accgcgaatt cccacccgcc
    23221 ttcgccctca aacacgcctc caaagacctc aacctcgccg tcaaagagct tgaacaggca
    23281 ggcaacaccc tgcccgccgt cgaaaccgtt gctgccagct accgcaaagc agtcgaagcc
    23341 ggctacggcg aacaggacgt ttccggcgtt tacctgaaat tggcagaaca ctgattgcct
    23401 tttccaaaca caatgccgtc tgaacatatt tcagacggca tttttatcac cccacgctaa
    23461 ataaaaaata gggaacaaat atgtggaaaa tgttgaaaca catagcccaa acccaccgca
    23521 agcgattgat tggcacattt tccctggtcg gactggaaaa ccttttgatg ctggtgtatc
    23581 cggtgtttgg cggccgggcg atcaatgccg tgattgcggg gggggtgtgg caggcgttgc
    23641 tgtacgcttt ggttgtgctt ttgatgtggc tggtcggtgc ggcgcggcgg attgccgata
    23701 cgcgcacgtt tacgcggatt tataccgaaa tcgccgtgcc ggtcgtgttg gaacagcggc
    23761 agcgacaagt cccgcattcg gcggtaactg cgcgggttgc cctgtcgcgt gagtttgtca
    23821 gcttttttga agaacacctg ccgattgccg cgacatccgt cgtatccata ttcggcgcgt
    23881 gcatcatgct gctggtgctg gaattttggg tcggcgtgtc ggcggtgggc atacttgcgt
    23941 tgtttttatg gcttttgcca cgttttgccg ccatcagcga aaacctgtat ttccgcctga
    24001 agaacagctt ggaatgcgac aaccacttta tccgaaaagg agaccggcgg cagctggacc
    24061 gccattacgg actggttgcg cgcctgcgtg tgctgatttc caaccgcgaa gccttcggct
    24121 atctctgcgt cggcgcggcg atgggtattt tgttcggctt tgcttttgtg atgatgacgc
    24181 tcaaaggcta cagcagcgcg gggcatgtct attcggtcgg cacttatctg tggatgtttg
    24241 ccatgagttt ggacgacgtg ccgcgattgg tcgaacaata ttccaatttg aaagacatcg
    24301 gacaacggat agagtggtcg gaacggaaca tcaaagccgg aacttgaaaa atgccgtctg
    24361 aacacgcttc agacggcatt tccatccgtt cggcaaacta catcacatcc gcccgccggt
    24421 tgacaagttt ggcaaacaac ttttcaacag aagcttccgc ctgcaaacca atgcgctgga
    24481 tcaggctttg cttctcctga tatttcactt cgataacctg tttgttttca aacgctttca
    24541 acaacaaatc atcactggtc gaaatctcgt caatcaagtt caacgccaac gcctgccgac
    24601 cgaaccaatg ctcgcccgtt gccacttcct caatatccaa ttgagggcgg ttctcgctga
    24661 caaactgctt gaacaactga tgcgtttcct ccagttcctg tcggaatttc tgtttgccct
    24721 tttccgtatt ttcacccata aaagtaaccg tgcgcttaaa ttcgcccgcc gtcatcacat
    24781 ccacatcaat atcatgtttt ttcaacaggc ggtggatatt cggtacttcc gccaccacac
    24841 ccaccgaacc gacaatcgca aacggagcgg aaacaatttt atccgccaca cacgccatca
    24901 tataaccacc gctcgctgcc accttatcga cggcgacggt cagcggaata ttgcgttcgc
    24961 gcaaacgcct aagctgtgaa gccgccaaac cgtaaccgtg aaccacgccg cccggacttt
    25021 ccaatctaag cagaacctca tcttcaggct tggcaatcaa aagcaccgcc gtaatctcat
    25081 gacgcaagga ttctacggcg tgtgcataca aatcgccgtc aaaatccaac acaaaaaggc
    25141 gggatttttg cgtttcggaa gatttctccc caccctcctt caaacgcttt ttctctgctt
    25201 tggcttccgc cttttccttt ttcttttcct ctttttcctg atgttttgcc tcttccccgc
    25261 ttaaaaagaa tgcttcaaac gattgccgct gttttttata attttccgaa aaatccgtca
    25321 gtacgacact gccgctttcc gactgtttct tactctgtac gatagccaac acaatcagcg
    25381 caattgcgcc gaacacggta agcagttcga gcaggaaaat accgtaattc agtaaaattt
    25441 ctttccacat tgattggatt tcctcttgtt caggcatgaa catgtcaata ttgtccatca
    25501 ccgtccgaca gataaaaaaa taaccgcttg gagcggcatt gtcattttca gcttggtgcc
    25561 cggagccgga atcgaaccgg cacgggatgt ttagtcccga cggattttaa gtccgttgtg
    25621 tctacctatt tcaccacccg ggcatttgtg aaaggtggag gcgggggcgc ggattttaac
    25681 cggcctatat gaagattgca ctcctcatag cataaacact ctgccacccc gccatagtac
    25741 gataatggag gcgagagtcg gaatcgaacc ggcgtagacg gatttgcaat ccgctgcata
    25801 accactttgc tatctcgccc taaaactggc ttatctaaaa aaacttggag cgggaaacga
    25861 gtctcgaact cgcgacctca accttggcaa ggttgcgctc taccaactga gctattcccg
    25921 cgcgttcaaa catatcggtt tttggagcgg aaaacgagtc tcgaactcgc gacctcaacc
    25981 ttggcaaggt tgcgctctac caactgagct attcccgcgt tgatatgttt gaaataaaac
    26041 ttggagcgga aaacgagtct cgaactcgcg acctcaacct tggcaaggtt gcgctctacc
    26101 aactgagcta ttcccgcaat gattgtggga aaatgaaatt tttggagcgg gaaacgagtc
    26161 tcgaactcgc gacctcaacc ttggcaaggt tgcgctctac caactgagct attcccgccc
    26221 gatttcattc tccaacatcg aagagacgca attattatgg attctgtttt tgccgtcaag
    26281 ctatttttat gtttttttca ggcgatttct ttccacgcca ttttcagata atacagcatc
    26341 gaccagactg tcagcaaaga tgcgataaac atcaatacat tgccgataac aacaagatta
    26401 aatccgtaaa aatcgggaat attcagcagc agcaggaaaa ttgccagcat ttgcgcggcg
    26461 gttttaaact taccgacggt ggcgacggca acgctgttcc ttttgcccat ttgcgccatc
    26521 cattcgcgca atgcggaaat ggtaatttcc ctgccgataa tgatcatggc aaacaaaaca
    26581 taggtccggt cgagtttgac cagtaaaagt agcgatacgg caaccatcag cttgtcggcg
    26641 acgggatcga ggaaggcgcc gaaatcggaa gtctgtttcc acagtcttgc caaaaatccg
    26701 tcaaaccagt cggttaaggc ggcaacggca aaaatgacgg cggcggtgag attaatcgtt
    26761 tcctccgcga accacggaaa aggcaggtaa aaaagggctg tcatgacagg aatgagcaag
    26821 accctcaacc atgtgaggaa gatggggaga ttccaaggca tcggttttct ctgtgcagac
    26881 tgtaaagttg tgattataac ggttatcctc ataacccaaa acgtaaaatt gctgcatggg
    26941 cattcccccg ccccgccaat ctgttttcac attcttttca aacgcaggaa aatggcgggc
    27001 aataaaagca aaatacccag tttcaggctg aaaacggcag gttgtgccaa cacttcgaca
    27061 aggcggtctt ccgtgcgggc aaaatcttta ttgcttatag acactgccac tgttgcggta
    27121 ttccaacaga acgccgttta aaaaaccttt gccgacggtt tcgcttaaaa cggctctaac
    27181 ctgctccgcc ctgatggttc tgccgatatt gccttccgcg cacaaaccgt cgaacccata
    27241 gcaggaaagc cggtaatgct gcccgtctgc atccagtttg attgcccgtc cgctgcggtt
    27301 gggggcggta acggtcaatt ccgcatattc gaatgttttt tcttgttcgt gaaatgccgt
    27361 caggtaaggt gcaataaaaa cggcggacaa cagcagacag cttatggcgg caaaccatac
    27421 ccagcgataa tatagtggat taaatttaaa ccagtacagc gttgcctcgc cttgccgtac
    27481 tatttgtact gtctgcggct tcgtcgcctt gtcctgattt aaatttaatc cactatattt
    27541 cacgcttacc ccttgtttct caaatgccgt ctgaaaaaac ggctgcatat gttgtctaca
    27601 aaatatcggg aagcataaca gacaaaatgc cgtctgaaat attttcagac ggcatttctt
    27661 atccgaaacg gattattttt gcgtttcaac cgcttccaat gcacgcaggg cgtaagtgta
    27721 agcggcaccg gcattcaggg cgatggcggt tgccaatgcg cctgcgattt cgctgtcggt
    27781 cgcaccggct ttggcggcag cggcggcgtg aacgctgatg cagctctcac aacgtgtggt
    27841 aatggcaacg gcgatggcaa tcagttcgcg cgttttggca tcaagtgctt cggcggcggc
    27901 ggcctgttcc aatgcgccgt aggcctgcag cattttagga tgcgccttac ccagctcgcc
    27961 gaacgatttt ttaaccaatg cggtatgttc tttccaatct ttaaacattt tcttttcctt
    28021 tctcttgcgt ttaaccctga tacgcgcttg cgtatctgtt ttcgatgtgc gtattattgc
    28081 aattattcag ttgtgtttct cgtttaatca tctcatttta tggttcaaaa agatttatgg
    28141 acattctgga caaactggtc gatttcgccc aattgacggg cagtgtggat gtgcagtgcc
    28201 ttttgggcgg acaatggtcg gtacggcatg aaaccttgca acgcgaagga ctggtacaca
    28261 ttgttacatc gggcaacggc tatctctgca tcgacggcga aacttccccg cgtccggtca
    28321 gtacagggga tattgtattt ttcccgcgcg gcttgggtca tgtgttgagc cacgacggaa
    28381 aatgcggaga aagtttacaa ccggatatgc ggcagcacgg tgcgtttacg gtcaaacagt
    28441 gcggaaacgg acaggatatg agcctgtttt gcgcccgttt ccgctacgac acccacgccg
    28501 atttgatgaa cgggctgcct gaaaccgttt ttctgaacat tgcccatccg agtttacagt
    28561 atgtggtttc aatgctgcaa ctggaaagca aaaaaccttt gacggggacg gtttccatgg
    28621 tcaacgcatt gtcgtccgtc ctgctggtgc ttatcctgcg cgcctatctc gaacaggata
    28681 aggatgtcga actctcgggc gtattgaaag gttggcagga caaacgtttg ggacatttaa
    28741 tccaaaaggt gatagacaaa ccggaagacg aatggaatgt cgacaaaatg gtggcggctg
    28801 ccaatatgtc gcgcgcgcaa ctgatgcgcc gtttcaaaag ccgggtcgga ctcagcccgc
    28861 acgcctttgt gaaccatatc cgcctgcaaa aaggcgcgtt gctgctgaaa aaaaacccgg
    28921 attcggtttt gtcggtcgca ctgtcggtag gctttcagtc ggaaacgcac ttcggcaagg
    28981 cgttcaaacg gcaatatcac gtttcgccgg gtcaataccg gaaagaaggc gggcaaaaat
    29041 aaatcggggc ttcaaacgca aatgccgtct gaaaaggctt tcatacagca tttgcgtacc
    29101 gcgtcatttc aagggctgca tcttcatcac ttccatcaaa aagttggtaa atgcggggtt
    29161 gttgggtttg acatccatat ttttccaacg ctgctgccag ccgcgcaagg cattctggat
    29221 atacagcttg gactgttccg tattgattgc gccccgctgg ctgtctatcg ccgaacgcag
    29281 gtagatttca tacatactgt catcgacggc attgcgtccg accaggcgtt ttctgaagtt
    29341 gttcagatat tgcgccgcct gaaccttggt cattttaccg atacccacct gatagcccaa
    29401 gcgcgtcgct tcatcgctga ttttggcaac atccgtccaa tgcgaagagg caaggcggaa
    29461 accttttgca ggtgcttccg ttttgacggt attgatagga ttcacgggga tttccgtcaa
    29521 tgtgggcaca taaatagact ggcagccgga aagaactgcc gcaatggaaa gagggataag
    29581 gtattttttc atgcccccat tataatcaag tttgccttga gaaaacaaat tgttcggcaa
    29641 gaaaaataaa atttcggcat cagaagcagg caaaaacaca ttccacaagc cttgccgcaa
    29701 ggtttacaat ccgaccgtcc ttatcgcaac gaccgtttat ggataccgca aaaaaagaca
    29761 ttttaggatc gggctggatg ctggtggcgg cggtctgctt caccattatg aacgtattga
    29821 ttaaagaggc atcggcaaaa tttgccctcg gcagcggcga attggtcttt tggcgcatgc
    29881 tgttttcaac cgttgcgctc ggggctgccg ccgtattgcg tcgggacacc ttccgcacgc
    29941 cccattggaa aaaccactta aaccgcagta tggtcgggac gggggcgatg ctgctgctgt
    30001 tttacgcggt aacgcatctg cctttggcca ccggcgttac cctgagttac acctcgtcga
    30061 tttttttggc ggtattttcc ttcctgattt tgaaagaacg gatttccgtt tacacgcagg
    30121 cggtgctgct ccttggtttt gccggcgtgg tattgctgct taatccctcg ttccgcagcg
    30181 gtcaggaaac ggcggcactc gccgggctgg cgggcggcgc gatgtccggc tgggcgtatt
    30241 tgaaagtgcg cgaactgtct ttggcgggcg aacccggctg gcgcgtcgtg ttttaccttt
    30301 ccgtgacagg tgtggcgatg tcgtcggttt gggcgacgct gaccggctgg cacaccctgt
    30361 cctttccatc ggcagtttat ctgtcgtgca tcggcgtgtc cgcgctgatt gcccaactgt
    30421 cgatgacgcg cgcctacaaa gtcggcgaca aattcacggt tgcctcgctt tcctatatga
    30481 ccgtcgtttt ttccgccctg tctgccgcat tttttctggg cgaagagctt ttctggcagg
    30541 aaatactcgg tatgtgcatc atcatcctca gcggtatttt gagcagcatc cgccccactg
    30601 ccttcaaaca gcggctgcaa tccctgttcc gccaaagata aaaaatgccg tccgaacatc
    30661 cttcagacgg catatcgggc tttatttccc cgccttcaca tcctgccact ggcgcaccat
    30721 aaacttcaat gccgccggct ggataggcac catgataaag ctgtttttca aatcctcctc
    30781 ggttgggaaa atcgtattgt cgtttttaaa ttcgtcttcc atcagctcac gcgccggctt
    30841 gctcgaaggc gcataagtaa cgaaattgcc gtttttcgcc gacacttccg gatcgaggaa
    30901 gtcgttgatg tatttgtgcg cgttggcgac gtttttcgca tctttcggaa tcacgaaaga
    30961 atccacccaa atccccacgc cctctttggg catcatcacg cggatttttt ccttgccgcc
    31021 cgcttcttcg gcacggcgtt tggcgatgtt caaatcgccg ccgaaaccga ttgttacgca
    31081 ggtatcgccg cgcgccaaat catcgataaa gccggacgaa gtaaagcgtt tgatattggg
    31141 gcggtttttc ttgagtaggg cggttgcctc cctgatgtct tccgtattgc tgctgttcgg
    31201 gtttttaccc aaatagttca acaccatagg atagatttcc gccgcgctgt ccaaatagct
    31261 gatgccgcat tgcttgagtt tggacgtgta ttcggggtcg aacaccaaat cccactggtt
    31321 gtccggcagc ttgtccgtac ccaaagcctt tttcacgcgt tcggtattga tggcgaaggt
    31381 atttgtcccc caataaaacg gcacggcgta ttcgtggccg ggatcgaccc cgtccatcag
    31441 cctcatcatt tcagggttga ggtgtttata attgggaatc agcgacttat cgattttctg
    31501 atacgcacct gccttaatct gcctgcccac aaacgcattg gacggcgcga caatgtcgta
    31561 accggacttg cctgtcagca ccttgctttc cagcgtttca tcgctgtcgt acacatcata
    31621 agtaaccttg atgccgtttt tcttttcaaa atcggcaacg gtttccggat cgacatattc
    31681 cgaccagttg taaattttca atacgttttg gttttccgcc ggtgccggtt tttcggcagg
    31741 cggtttgtcc gaaccgccgc acgctgcaag cagcaaagca gtcaggacgg ccaggggcag
    31801 atgtttggtc attatcattc cttgcatatc gggttggaga aagcggccat tatagccgat
    31861 attggcaaca gggcttcaga cggcattcaa aatcccgcca cactcttccg aaaaccgccg
    31921 cttccatagc tagaaacagg gatttgcggt aagataccgc cgttcgtttt ccctgctttt
    31981 accatgacaa gacatttgag agacattgaa aaaattatga aaacctccga actgcgccaa
    32041 aaattcctaa aattttttga aaccaaaggc cacaccgtcg tccgctcttc cagcctcgtg
    32101 ccgcacgacg acccgaccct gctgtttacc aacgcgggca tgaaccagtt taaagacgta
    32161 ttcttaggtt tcgacaaacg cccgtacagc cgcgccacca ccgcgcaaaa atgcgtacgc
    32221 gcaggcggca agcacaacga cttggaaaac gtcggctaca ccgcccgcca ccacaccttc
    32281 tttgaaatga tgggcaactt ctccttcggc gactacttca aacgcgacgc catccatttc
    32341 gcttgggagt ttctgacttc ccccgaatgg ctcaacatcc ctaaagacaa actgttggcg
    32401 accgtttacg cagaagacga cgaagcctac aacatctggt tgaacgaaat cggtatgccg
    32461 tctgaacgca tcgtccgcat cggcgacaac aaaggcgcga aatacgcgtc tgataatttt
    32521 tggcaaatgg gcgacaccgg cccttgcggc ccctgctccg aaattttcta cgaccacggc
    32581 gaagaaattt ggggcggcat tcccggcagc cccgaagaag acggcgaccg ctggatcgaa
    32641 atttggaact gcgtatttat gcagttcaac cgcgacgaac aaggcaatat gaatccgctg
    32701 cccaagccgt ccgtcgatac cggcatgggt ttggagcgca tggcggcagt aatgcaacac
    32761 gtccacagca actacgaaat cgacttgttc caagacctgc tcaaagccgt tgcccgcgaa
    32821 accggcgcag ctttcagcat ggaagaacca agcctaaaag tcatcgccga ccacatccgc
    32881 tcctgctcat tcctgattgc agacggcgta ttgccttcca acgaaggccg cggctacgta
    32941 ttgcgccgca ttatccgccg cgccgtgcgc cacggttaca aactgggtca gaaacaagca
    33001 tttttctaca agctcgtgcc tgatttggtg aaagcgatgg gcgacgcgta tcccgagttg
    33061 aaagagaagc agacgcaaat tatggaagcc ctgcgcgcgg aagaaagccg cttcggcgaa
    33121 acgctggaaa aaggcatggg cttgttcaac caagtctata atgaattgaa attcaatcaa
    33181 atttttgatc ttctggcgaa agaatttaag gttacacctg ttgaagatat tgatcttgat
    33241 atgtttagta caagaaattt tgtaggaaga agtgctgaaa ttccttatat atcaaatcaa
    33301 caccctaacg tggattatcc cgctcctatg gggaacgtaa atgaaaaaat ttatgctatg
    33361 ccagtgagat taacagatgg aagaattggt attaatattt ttcctactga tgaaactgca
    33421 cgcctaatcc ttagcaatga ttggaatagt ttgcgcttct attctttttg taattcgttg
    33481 attacttatt atcaacagaa aggtcaatta gaaacattaa aattgaacgg cgaacacatc
    33541 ttcaaactct acgacaccta cggtttcccc tacgacctga ctgccgacat ctgccgcgaa
    33601 cgcaatatcg aactggacga agcaggcttc gagcgcgaaa tggaagccca acgcacacgc
    33661 gcacgcgccg cacaaagctt caaagccaac gcccaactgc cttacgacgg tcaagacacc
    33721 gagtttaaag gttatagcga acgccaaacc gaatccaaag tcctcgccct ctacaaagac
    33781 ggcgagcaag tcaacgaatt gaacgaaggc gacgaaggtg ccatcgttat cgactttacc
    33841 ccgttctatg cagaatccgg cggccaagtc ggcgacgtcg gctatatctt tgcaggcgaa
    33901 aaccgctttg aagtacgcga tacccaaaaa atcaaagcag ccgtattcgg ccaattcggc
    33961 gtacaaactt caggccgtct gaaagtcggc gacagcgtta ccgccaaagt ggacgacgaa
    34021 atccgcaatg ccaatatgcg caaccacagc gcgacccacc tgatgcacaa agccctgcgc
    34081 gacgtattgg gcggacacgt cgaacaaaaa ggctctttag ttaccgccga atccacccgt
    34141 ttcgacattt cccatcccca agcggtcact gccgaagaaa tcgccgaagt cgaacgccgc
    34201 gtcaacgaag ccgttttggc gaacgttgcc gtcaatgcag ccattatgag catggaagac
    34261 gcgcaaaaaa ccggcgcgat gatgctcttc ggcgaaaaat acggcgaaga agtgcgcgta
    34321 ctgcaaatgg gcggtttctc taccgaattg tgcggcggca cacacgtttc acgcaccggc
    34381 gacatcggcc tcttcaaaat catcagcgaa ggcggtattg ccgcaggcgt gcgccgtatc
    34441 gaagccatca ccggcctgaa cgcactcaaa tgggcgcaag agcaagagcg tttggtgaaa
    34501 gacattattg ccgaaaccaa agcccaaacc gaaaaagacg tactggcaaa aatccaagca
    34561 ggcgcggcac acgccaaagc attggaaaaa gaattggcac gcgccaaagc cgaactcgcc
    34621 gtccacgcag gcgccaaact cttggacgat gcaaaagact tgggcgcagc caaactcgtt
    34681 gccgcccaaa tcgaagccga cgcagccgcc ctgcgcgaaa tcgttaccga tttaaccggt
    34741 aaatccgaca acgccgtgat tcttttagcg gcagtaaacg acggcaaagt ctccctgtgc
    34801 gccggcgtat ccaaaccgtt gaccggcaaa gtgaaagcag gcgatctggt taaatttgca
    34861 gccgaacaag tcggcggcaa aggaggcggc agaccagatt tggcacaggc agggggcacg
    34921 gatgcaggca aattgcccgc cgtgttggat agcgtgaaag actgggtcgg cgcgaagctg
    34981 gcttgatgga gaaaggcagc ctgaaaggga ttcaggctgc cttttgtgtt aaagatgccg
    35041 tctgaaagat attttcagac ggcctctgtc agtttatttg gctttatacc taccattgaa
    35101 tagcgattca gaaggtatcc agccatctgc caaatcatcc aacatcttaa tccaatactc
    35161 taggcgtttt tctgtcggga cgctttctcc ccaatattcg acaattagag catcatccat
    35221 ttccaaagca gctttttcaa tttcatgctc aatcaatttt aaagattttt ctacatagtt
    35281 tccgccacgg tagtcttccg ccgagttggc aacgctgccc gcactgaata agtcccgcgc
    35341 ctgatgacaa agcacaccgc gataggtaat cagatacagg acggcattat cgtatttgtg
    35401 cttcgccctg cctgagcaga caatacgggg ggagactaat gctgcttcag ctcggaggcg
    35461 gattttttct tcctgcggca gggaagtgta aaggcgcact tccaaaggca gatcatggct
    35521 gtctactgcg tcaatgtctt ctatccacca taaccgctcg ccttctttca gcctgttacg
    35581 ggcatatttt cggatatatt ccattttttc atgcatatcc aaatcggcaa attcagcata
    35641 ggaaataccg aaaccctcaa acagagacgg tcgatcagat tctatttcta cctcaaagcg
    35701 cggaacatgc gatgtgcgga catgaattac gctatcttcg taaagttgcc atttcacatc
    35761 gggaatgccc cccatttttc cgaatatcac atagatatgc tgtacaccgt cagctttgtt
    35821 tttctcttgg atactgtttg ctacgcttcg ccaagtatct tttagcgtga atttgacttc
    35881 tacgccatat tcccctattg gaacatcggg gaaaatttgc ggcacaggtt caggattgat
    35941 aactatgtca gcataagcgg gaatttttgc aatgcacagc gcacgaactc tgttttcaaa
    36001 aatatcttgg gatttgaaag gtgcgttttt tgcctcttgc ctcaatacgg tgcaaacctc
    36061 gtctaaaaac ttctcaaact ccttttttgt cagcataatg cattaccact taaaaatata
    36121 aagtagtaat tttatcttat ttaacagggt tatttaagtg ccttactgac agcggcggcg
    36181 atgtgccacc ctaaaacagg agggacggcg ttgccaattt gccgttctgt ggcacgcaat
    36241 tttgcctgga aaataaaatt gtcgggaaac gattggatgc gcgccgcctc acgcatggag
    36301 atgcggcggg gtaattcgta atgccactgt atgtttccat ggcattctgc cctaatagtg
    36361 tagcccgccc tttcggcatc caattttcga ctaccttgat cggggctttt ttctgctcta
    36421 ctccaaatat ggttggcaat ttcgtcttct actttgtcga ccaaatcgcc tatagcctgt
    36481 ctggctgtta catagctgtt gctggtattt gttttttcaa tctgtatttc gggaatttca
    36541 ggtagccttc caacgataat aactcgctcc cgagtctgtg gaacaccgta atcggctgca
    36601 ttcagcaagt agtaatctac ctgataaccc aaattgcgaa aatctgaaag cactgtttcc
    36661 aaatctttcc gatgatgctt catcagtagc cctttgacat tttcagcaac aaatattttg
    36721 gggcgaacgc gttcaacagc agacaacatg gctttataca gcccgctgcg gctgcctgaa
    36781 atacctgcac ctttaccatt aatagaaata tcctgacaag gaaagccacc gataatgatg
    36841 tctgcgctag tgggtatttc atccaaatgc tgccaaatat caccatgtac aatgtgattt
    36901 cctaagttgt ggcggtaggt tctaacagcg tgttcgtcga tttcgttcgc ccaaataata
    36961 tcaaaatcat gtttgtcata agtacggttt aaaaactcaa agccccccag aaaacccaaa
    37021 tccattccgc cacaaccgct aaataaagaa ataattttat attttttttc gcggtcttct
    37081 tgcttttcct gtttggtcat taactccata catttaagat aaaaagcatg ggaaaaagta
    37141 cctctattta ctttgttaca aattgcattt gccgtttcac tttccccttg ctccaagaat
    37201 aattctgata attgtataaa gccaattcca tgctcatgca ttttggcttt tatggcatct
    37261 ccagctaact tgttccaatt ttttcgtgca aattcggtca tggttaatct ttcagtcatt
    37321 cataaatgac attattttag cgttttttat aatttaagcc aagatttaaa atctaccttt
    37381 aggtttacag gccgtctgaa aacaaaaatc tcgttttcag acggcctttt tccgctaaaa
    37441 tccccctacc gtccaacccg aaacaaggag aaccatcatg caagttccta cttccgccat
    37501 catcaacggc gaatttgccg acaaatacgg caaacgcggc agcaagccgt agccagcacc
    37561 cctgtcaacc gcgtgcgtgg ctagaccaca caccctacca ctgcgggcga cgcaaacctt
    37621 aagattgagg tgtagggtgt gtgcggtacg cacgcacgcg gtttttgtta ctaccgaatg
    37681 attccaaacc atgccgtaat ccagtcagca gcaaactcag cttgggtcat gtaccaacaa
    37741 aactcaatat caaaggccgt ctgaagaata attttcagac ggcttctctc tatcaaaagc
    37801 agcctgcaca ttcaaaaatc gaagtgcagg ctgctttttg tgatgattgg aaaaaacaca
    37861 cactattttt atactgtata ttgtgcaggt acaaagtaaa acgaattacc caaagaaatt
    37921 cccatgttta agacgctcaa aagcatttgg cagggactta cgcaaaaagg caaaatcttc
    37981 ccgtaccaac tggcattcac gctgctgatt cctttgcgta actgggcgct ttcaccgcaa
    38041 caaatcacgc aacggctgca ctttgttccg caccaccgaa tttgctgcgg ggcgggttat
    38101 ttcagttgcg taggatgtgc ttcagcccac cgtttcctca tttttgcttg ttaattggtg
    38161 ggctgaagcc cacactacgg ttaatacggt tactgattcg tttccccctg catccgaatc
    38221 acgccgcaca ccgcaaaaaa cgcgcgcccg atgcgcaacc gcttccgaca tttggcgcaa
    38281 tgagacaaaa cggcaatatg ccgatacgga tacgtcatcc tccgcctgcc tgttttttat
    38341 atcatactca attttatctg tgcgttacga cggcatgccg tctgaagggt gtttatgtct
    38401 gcatctaaga aatttccgat tcctttgagc tatttcagca tcgcgctggg cttgtttgcc
    38461 ttggggctgt cgtggcgtta cggcgcgtct gtcgggctgc tccccgcctt ggccgccgaa
    38521 tcgctgcttg cggtggcttc ggttgtctgg ctcttgctgg tggcggcata cctgatcaaa
    38581 atgtttgcgt accgaaacga ttttttgtct gatttgcgcg acttggtgca atgctgcttc
    38641 atcagcgcga ttccgattac cgctatgctg gagggactcg cgctgaagcc ctatcaggca
    38701 ggcgcggcgg cagtcctgat ttatgtcggc gttgccggac agttggcgtt ttcgatgtat
    38761 cgggcggccg gtctgtggcg cggcctgcat tccttggagg cgacgacgcc gattatttat
    38821 ctgcctacgg ttgcgacaaa ctttgtcagc gcgtcatctc tggccgcgtt ggggcatcat
    38881 gattatgcag ctttgttttt cggcgcgggt atgttttcct ggctgagctt ggaagcctcc
    38941 atcttgggca ggctgcgcac ggcggcaccg gtcggcacgg cggcgcgcgg cgtggtcggc
    39001 atccagcttg cgcccgcctt tgtcggctgc ggcgcgtatt ttgccgtcgg cggtaaagtc
    39061 gacggttttg cgttggcatt aatcggctac ggctgcctgc agcttttgtt cttgctgcgc
    39121 ctgacccgct ggttttggga aggcggtttt acgatgagct tttggggatt ttcattcggt
    39181 ttcgcggcaa tggcaggatg cggtctgcat ctggcggctt ctggcatatt gtcgggcttg
    39241 gggctgacgc ttgccaccgc cggatcggca ggcgtggcgc tgctgcttgt cggtacgctg
    39301 caccggatag cgacggggcg tttcttggta cgcggctgat gcgttttgcc gccttgtcaa
    39361 aaatgccgtc tgaacgccca agccttcaga cggcattttt tatttcaaac ccttacaggt
    39421 agaatttttc gaggactttc aggttgtcat ccaatttgta caccagcggc tgaccggtcg
    39481 ggatttccaa gcccatgatg tcttcgtcgg aaataccctc gatgtgtttt gccagcgcgc
    39541 gcagggagtt gccgtgcgcc gctaccaaga cgcgtttgcc gctcaaaatc gcgggggcga
    39601 tttggtcttc ccaaaacggc aatacgcgat ccagcgttac tttcaggttt tcgccgtcgg
    39661 ggataacatc ggcaggcaga tgggcatagc ggcggtcttt gtgtgcggaa aacgcgtcgt
    39721 ctttgtccaa aagcggcggc agagtgtcgt agctgcgccg ccagatgcgg acttgctcgt
    39781 cgccgtattg ttcggcggtt tgttttttgt ccaaaccttg cagttggccg tagtggcgtt
    39841 cgttcagccg ccacgttttg atttgcggta cgaacagttg gtcggattct tccaaaacga
    39901 tgttgcaggt cttaatcgcg cgggtcagga cggatgtgaa ggcgatgtcg aactcatagc
    39961 cgttttcttt cagtttttta ccggcggcgg cagcctcggc aagcccctgc tcgctcagct
    40021 tcacgtcgcg ccagcctgta aacaggtttt tcgcgttcca ttcgctttgt ccgtggcgga
    40081 taaataccag ttccatatcg tctccaatgt gtgaaagtag gaaagcctta tttataacat
    40141 attttcacat ttcccgtatt tgattcagat ttagacacgg tgcccactat ggtttgccgt
    40201 tttgatttac aataatgtcc tttgctttac attccgcata cacaatgttt caacacacag
    40261 gacgacacat aaagcaccgc cctatgtgtt gccctgattt ggaaggggtt gccccctccc
    40321 aaataaagtc tgattctacc gccccgaagg acagatgtcc aagtggcggg ggttcaaccg
    40381 aaaaggaaat acgataaata tgcaaccgca cgctccacat accgattcca atacgctgat
    40441 gctcggccga tacgccgaac gcgcctatct cgaatacgcc atgagcgtgg tcaaaggccg
    40501 cgcgctgcct gaagtttcag acggccaaaa gcccgttcag cggcgcattt tgtttgcgat
    40561 gcgcgatatg ggtttgacgg cgggagcgaa gccggtgaaa tcggcgcgcg tggtcggcga
    40621 gattttgggt aaataccacc cgcacggcga cagttccgcc tatgaggcga tggtgcggat
    40681 ggcgcaggat tttaccttgc gctatccctt aatcgacggc atcggcaact tcggttcgcg
    40741 tgacggcgac ggggcggcgg cgatgcgtta caccgaagcg cggctgacac cgattgcgga
    40801 attgctgttg tccgaaatca atcaggggac ggtggatttc gtgccgaact acgacggcgc
    40861 gtttgacgaa ccgctgcacc tgcccgcccg cctgcctatg gtcttgctca acggtgcgtc
    40921 aggcattgcg gtgggtatgg cgaccgaaat cccatcacac aatttgaatg aagtcacaca
    40981 ggcggcgatt gcactgttga agaagccgac gctggaaacc gccgacctga tgcaatacat
    41041 ccctgctccc gattttgccg gaggcggtca aatcatcacg ccggcggacg aattgcgccg
    41101 tatttacgaa accggcaagg gcagcgtgcg cgtgcgtgcg cgttacgaaa tcgagaagct
    41161 ggcgcgcgga caatggcgcg tcatcgtaac cgagctgccg ccgaacgcca attccgccaa
    41221 aatccttgct gaaatcgaag aacagaccaa cccgaaaccg aaagcaggca aaaagcagct
    41281 caaccaagac cagctcaata ctaaaaagct gatgctggat ttaatcgacc gcgtgcgcga
    41341 cgagtcggac ggcgaacatc ccgtgcgcct tgtatttgaa ccaaaatcca gccgcatcga
    41401 taccgatacc ttcatcaaca cgctgatggc gcaaacttcg ctggaaggca atgtgtccat
    41461 gaacttggtg atgatggggc tggacaaccg ccccgcgcag aaaaacctga aaacgatttt
    41521 gcaggaatgg ttggatttcc gcaccgttac cgtaacacgc cgtctgaaat tccgtttgaa
    41581 ccaagtggaa aaacggctgc acatcctcga aggccgtctg aaagtctttc tgcacatcga
    41641 cgaagtgatt aaagtcatcc gcgaatcaga tgacccgaaa gccgatttga tggcggcgtt
    41701 cgggctgacc gaaatccaag ccgaagacat tttggaaatc cgcctgcgcc agttggcacg
    41761 tttggaaggt ttcaaactcg aaaaagaatt gaacgaattg cgcgaagaac aaggccgtct
    41821 gaacatcctt ttgggcgatg aaaacgaaaa gcgcaagctg attatcaaag agatgcaggc
    41881 ggatatgaaa caatacggcg atgcacgccg cacgctggtg gaagaggccg gacgcgccgt
    41941 gctgacacaa accaccgccg acgaacccat cacactgatt ctgtcggaaa aaggctggat
    42001 acgcagccgt gccggacaca atctcgattt gagccaaacc gcgttcaaag aaggcgaccg
    42061 cctcaaacaa acccttgaag gcagaacggt tttacccgtc gtcatcctcg attcattggg
    42121 cagaacctat acactcgatg ccgccgaaat tcccggcgga cgcggcgacg gcgtgccggt
    42181 ttcatccttg atcgagttgc aaaacagcgc gaaacccgtt gcgatgttga caggattgcc
    42241 ggaacaacat tatttattat caagcagcgg cggctacggc ttcatcgcca agttggctga
    42301 tatggtcgga cgcgtaaaag cgggcaaagt ggtgatgacc acagacagtg gcgaaaccgt
    42361 cctgccgccg attgccgtct atgcctcctc gttcatcaac cccgactgca aaatcattgc
    42421 cgccaccagt caaaaccgcg ccctcgcctt ccccatcggc gaattgaaaa ttatggcgaa
    42481 aggcaaaggg ctgcaaatca tcggattaaa cgccggcgaa tcgctgacgc ataccgccgt
    42541 ttcttccgag ccggaaatcc tgattgaaag cgaaggcagg cgcggcgcgg cgcacaaaga
    42601 ccgcatcccc gtctccctgc ttgaggcaaa acgcggcaaa aaaggcaaac tattacccat
    42661 atcgggcagc ctgaaacagc tttcttcccc caaataaacc cgattccaca cataattatg
    42721 gtgatttcca acccccgcga acttgaaaaa ctcaaagacc ggattcccaa tctgatcaac
    42781 atcatccgcg tcgccatcgt ttttccgctg atgattatgc acatcctcgg gctggaaacc
    42841 ggcagccgtg cgaacctgca cgcttcgtgg acggcgtggg cgttttatgt ttggctcgcc
    42901 attgcctgct ggctgatttt cttttccatc atccatccgc attggcaatg gcagtcgctg
    42961 aaaatgccgc gtttcagcgc ggtggcggac atcacgatga tcggcgtgct gacctacctg
    43021 tttggcggca tcgattccgg cttcggcatc ctgatcctgc ccttcgtcgt ctgctcctgc
    43081 ctgctcagct acgggcgtta ccccctgctc tattccagct acgccgccat cctgctgata
    43141 ttcaacgcca ttgccgacgg cgatatcggc aaatacccgc tcatatcgga tgcccgaacc
    43201 gcctcggtaa ccttcatcct tgtcgccgcc tcctatcttt ccgccatctt cacctcactg
    43261 tcggtcagat acatcgacag cgccggccgg ctggcacgcg acaaccacct cgcctaccgg
    43321 cgcatcaaag gcttgagcca aaccgtactc aaccgcgttc aggaagcggt cgtcgtcatc
    43381 aacgtcgagc atcagaccat actgttcaat aaaaaggcaa aagacctgct acccatgctt
    43441 gaaatcggac agcatactgc cctgttcgac cctattaccg ttttatggga caaggcctct
    43501 tcgcgtactt tcgaacgcaa tatcgacacg cccggcctga acgccggcat ccgcgccgtt
    43561 ccggtcaaca aagggccgga caagctgctc atcctctaca tccgcccgca aagcgaaatt
    43621 caggcagaag ccctgtccgt caaacttgcc gcgctcggac aactgaccgc caacctcgcc
    43681 cacgaaatcc gcaacccgat gtccgccatc cgccacgcca acgacctgct gcgcgaaaat
    43741 atggaagcgg gggcggcaga tccgttcaac gccaaattgt gcaaaatcat cgacggcaac
    43801 gtctgccgta tcgacaaaat gctcgaagat atttcctcgc caacaagcgc aacaaaaccg
    43861 aacgcgaaac catcggcctg ataccgtttt gggaagaatt caaacaagag ttcctgctcg
    43921 gccatcccga tgccgccggc tgcatccgcc tagatatgca gggcaatcac ctgactgcct
    43981 atttcgatcc tgcccacctg cggcaaatta tgtggaacct cgccaacaac gcgtggcggc
    44041 acagcagcaa acgtaacggc tcgattgccg tcgtcgcccg tcctgcacaa aaaaacacca
    44101 tcagcatcct gtttgccgac gacggcggcg gcgttccgcc cgaagtgcag gaacacttgt
    44161 tcgaaccctt ttacaccaca gcaaaaaacg gaaccggctt gggactgtat gtcgcccgcg
    44221 aactggcaca cgccaatttc ggcgatttga cctacctgcc ggaagccaaa tgtttcgaac
    44281 tcacattacc ggaaaaaacc aatgactgaa ctgcaacatc ccgtcctcgt cgtcgatgac
    44341 gaaaccgaca ttctcgacct gatggaaatg accctgatga aaatgggctt gcgcgtccat
    44401 accgcgtcag gcgttgccga agccaaaaac aagctcgaca gccaacgcta ttcgctcgtc
    44461 ctgaccgata tgcgtatgcc ggacggctcg gggctagaag tcgtccaaca catcaacagc
    44521 cgcctgctcg atacgccggt tgccgtcatc accgccttcg gcaatgccga tcaggcacag
    44581 gaagccctgc gttgcggcgc gttcgacccc gataccatgc agatacagga ctatctcgac
    44641 caaatcgaac gcgacatcat cgaacaaacc ctcaaacaaa ccgaaggcaa ccgcacgcag
    44701 gccgacaaac gcttgggcat cagcttccgt tccatgcgct accgtatgga acgcctcaac
    44761 atcggctgac gacaaaacgg catccgcacc atctccgccc acccgaaaaa atgccgtctg
    44821 aaacggcacg ggaaagcggg ttcgccccac gcccgaacgg acacaaaaca ccatgaccga
    44881 catccttatt gacaacaccg ccaccgaaac cgtccgcacc ctgatacggg cattccccct
    44941 tgtgcccgtt tcccaaccgc ccgaacaagg cagctacctc cttaccgaac acgataccgt
    45001 cagcctcagg cttgtcgggg aaaaaagcag cgtcatcgtc gactttgcct cgggagccgc
    45061 acaataccgg cgcacaaaag gcggaggaga actcatcgcc aaagccgtca accataccgc
    45121 caaacccacc gtatgggatg caaccgcagg attggggcgc gacagcttcg tcctcgcctc
    45181 gctcggactg accgttaccg ccttcgagca gcatcccgcc gtcgcctgcc tgctttcaga
    45241 cggcatccgc cgcgccctcc tcaatcccga aacgcaagac accgccgcgc gcatcaacct
    45301 ccatttcggc aacgccgccg aacagatgcc cgcccttgtt caaacacaag gcaaacccga
    45361 catcgtctat ctcgacccca tgtatcccga acgccgcaaa agtgccgccg tcaaaaaaga
    45421 aatggcctac ttccaccggc tcgtcggcga ggcgcaagat gaggccgtcc tcctccatac
    45481 cgcacgccaa acggcaaaaa aacgcgtcgt cgtcaaacgc ccccgcctcg gcgaacacct
    45541 tgccggacaa gcccctgcct accaatacac aggcaaaagc acccgcttcg acgtttacct
    45601 gccctacgaa gcggacaagg gataacgccc ataaaacaag acaccgaaaa atttgccgtt
    45661 cttatgcaaa cgagaaaccg gtttttgcgt ttcgactgtt ttggataaat catcacacct
    45721 taaagtt
//
LOCUS       DBBZXW010000005        38231 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.005, whole genome shotgun sequence.
ACCESSION   DBBZXW010000005 DBBZXW010000000
VERSION     DBBZXW010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38231
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.005"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(175..867)
                     /locus_tag="ACJJD2_000263"
     CDS             complement(175..867)
                     /locus_tag="ACJJD2_000263"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HGG7578879.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(975..2168)
                     /locus_tag="ACJJD2_000264"
     CDS             complement(975..2168)
                     /locus_tag="ACJJD2_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG7578880.1"
                     /translation="MSNQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2297..3034)
                     /gene="pxpA"
                     /locus_tag="ACJJD2_000265"
     CDS             complement(2297..3034)
                     /gene="pxpA"
                     /locus_tag="ACJJD2_000265"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HGG7578881.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3021..3950)
                     /locus_tag="ACJJD2_000266"
     CDS             complement(3021..3950)
                     /locus_tag="ACJJD2_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HGG7578882.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3947..4594)
                     /gene="pxpB"
                     /locus_tag="ACJJD2_000267"
     CDS             complement(3947..4594)
                     /gene="pxpB"
                     /locus_tag="ACJJD2_000267"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HGG7578883.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4778..6985
                     /gene="uvrD"
                     /locus_tag="ACJJD2_000268"
     CDS             4778..6985
                     /gene="uvrD"
                     /locus_tag="ACJJD2_000268"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HGG7578884.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVDVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     NAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTIENLQTASNEQGITLWQAACNAGAK
                     ATKVAAFVRLIEALRNQVGQMPLPEIIVGILKDSGLTEHYKTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFEILPENISDDPAFPILAFLSNATLESGENQAGVGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7342..7881
                     /locus_tag="ACJJD2_000269"
     CDS             7342..7881
                     /locus_tag="ACJJD2_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7578885.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRECGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8071..8286)
                     /locus_tag="ACJJD2_000270"
     CDS             complement(8071..8286)
                     /locus_tag="ACJJD2_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578886.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8410..8769)
                     /locus_tag="ACJJD2_000271"
     CDS             complement(8410..8769)
                     /locus_tag="ACJJD2_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HGG7578887.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8822..9199
                     /locus_tag="ACJJD2_000272"
     CDS             8822..9199
                     /locus_tag="ACJJD2_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7578888.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWNRAKRHLRKFNGIPKAHFELYLKECEW
                     RFNNSEIKVQISILKQLVKSSLS"
     gene            9398..10018
                     /locus_tag="ACJJD2_000273"
     CDS             9398..10018
                     /locus_tag="ACJJD2_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HGG7578889.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            10041..11492
                     /locus_tag="ACJJD2_000274"
     CDS             10041..11492
                     /locus_tag="ACJJD2_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HGG7578890.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            11954..12310
                     /locus_tag="ACJJD2_000275"
     CDS             11954..12310
                     /locus_tag="ACJJD2_000275"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HGG7578891.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            12301..12783
                     /locus_tag="ACJJD2_000276"
     CDS             12301..12783
                     /locus_tag="ACJJD2_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HGG7578892.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            12796..13389
                     /locus_tag="ACJJD2_000277"
     CDS             12796..13389
                     /locus_tag="ACJJD2_000277"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HGG7578893.1"
                     /translation="MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            13379..14635
                     /gene="nuoD"
                     /locus_tag="ACJJD2_000278"
     CDS             13379..14635
                     /gene="nuoD"
                     /locus_tag="ACJJD2_000278"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HGG7578894.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYEGSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            14635..15108
                     /gene="nuoE"
                     /locus_tag="ACJJD2_000279"
     CDS             14635..15108
                     /gene="nuoE"
                     /locus_tag="ACJJD2_000279"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HGG7578895.1"
                     /translation="MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGISPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGISYGETTPDGKFTLVEGECMGACGDAPVMLLNNHKMCSFMTEEAIEKKLAELE"
     gene            15498..16799
                     /gene="nuoF"
                     /locus_tag="ACJJD2_000280"
     CDS             15498..16799
                     /gene="nuoF"
                     /locus_tag="ACJJD2_000280"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HGG7578896.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            16799..17236
                     /locus_tag="ACJJD2_000281"
     CDS             16799..17236
                     /locus_tag="ACJJD2_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578897.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            17526..19787
                     /gene="nuoG"
                     /locus_tag="ACJJD2_000282"
     CDS             17526..19787
                     /gene="nuoG"
                     /locus_tag="ACJJD2_000282"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HGG7578898.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGIKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLFQEAAHPDEWAGRLKNLSANAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQVANSVGADVLGVNSGESV
                     AEMANAPKQAVLLLNVEPEIDMVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLQGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQATVH
                     AAVPAARVNPNTLGRLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            19790..20866
                     /gene="nuoH"
                     /locus_tag="ACJJD2_000283"
     CDS             19790..20866
                     /gene="nuoH"
                     /locus_tag="ACJJD2_000283"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HGG7578899.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            20947..21426
                     /gene="nuoI"
                     /locus_tag="ACJJD2_000284"
     CDS             20947..21426
                     /gene="nuoI"
                     /locus_tag="ACJJD2_000284"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HGG7578900.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            21438..22109
                     /locus_tag="ACJJD2_000285"
     CDS             21438..22109
                     /locus_tag="ACJJD2_000285"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HGG7578901.1"
                     /translation="MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVYRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            22106..22411
                     /gene="nuoK"
                     /locus_tag="ACJJD2_000286"
     CDS             22106..22411
                     /gene="nuoK"
                     /locus_tag="ACJJD2_000286"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HGG7578902.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            22445..23020
                     /gene="fic"
                     /locus_tag="ACJJD2_000287"
     CDS             22445..23020
                     /gene="fic"
                     /locus_tag="ACJJD2_000287"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HGG7578903.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKIVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            23144..23485
                     /locus_tag="ACJJD2_000288"
     CDS             23144..23485
                     /locus_tag="ACJJD2_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578904.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVFPK"
     gene            23534..25570
                     /gene="nuoL"
                     /locus_tag="ACJJD2_000289"
     CDS             23534..25570
                     /gene="nuoL"
                     /locus_tag="ACJJD2_000289"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HGG7578905.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGDHHGEEHHSLGKNDNPHESPLVVTLPLILLAIPSVIIG
                     YVAIEPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVL
                     SAWLLYVKLPHLPAKIAQTFRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDT
                     AIIDNGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            25659..27155
                     /locus_tag="ACJJD2_000290"
     CDS             25659..27155
                     /locus_tag="ACJJD2_000290"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HGG7578906.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFAAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFTILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            27165..28610
                     /gene="nuoN"
                     /locus_tag="ACJJD2_000291"
     CDS             27165..28610
                     /gene="nuoN"
                     /locus_tag="ACJJD2_000291"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HGG7578907.1"
                     /translation="MNWSDLNLMPAMPEIVLLALLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALMFTLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPAAGGNNAAKF
                     LLSINALLLVLWGIMPQTVIDWCAKALENTL"
     gene            28722..29021
                     /locus_tag="ACJJD2_000292"
     CDS             28722..29021
                     /locus_tag="ACJJD2_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HGG7578908.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHMIELA
                     AGFALTAILAYILESRAGSVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(29130..30026)
                     /locus_tag="ACJJD2_000293"
     CDS             complement(29130..30026)
                     /locus_tag="ACJJD2_000293"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HGG7578909.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAV
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(30010..30273)
                     /locus_tag="ACJJD2_000294"
     CDS             complement(30010..30273)
                     /locus_tag="ACJJD2_000294"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HGG7578910.1"
                     /translation="MSKWRGFNRKGNTMKKNAPKSFEEALSRLESLTQAMQGEMPLED
                     ALAAYQEGNELVRYCQTKLAQVEQKLQVLDADGPKELNLESDE"
     gene            complement(30382..30471)
                     /locus_tag="ACJJD2_000295"
                     /pseudo
     CDS             complement(30382..30471)
                     /locus_tag="ACJJD2_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676973.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
     gene            complement(30495..31418)
                     /gene="rsgA"
                     /locus_tag="ACJJD2_000296"
     CDS             complement(30495..31418)
                     /gene="rsgA"
                     /locus_tag="ACJJD2_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HGG7578911.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            complement(31423..33279)
                     /locus_tag="ACJJD2_000297"
     CDS             complement(31423..33279)
                     /locus_tag="ACJJD2_000297"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7578912.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVAWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VNDGMATLSKPHTILDKPRALPLNVPQGAIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(33305..33442)
                     /locus_tag="ACJJD2_000298"
     CDS             complement(33305..33442)
                     /locus_tag="ACJJD2_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578913.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(33442..34026)
                     /gene="ruvA"
                     /locus_tag="ACJJD2_000299"
     CDS             complement(33442..34026)
                     /gene="ruvA"
                     /locus_tag="ACJJD2_000299"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HGG7578914.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            complement(34108..34434)
                     /locus_tag="ACJJD2_000300"
     CDS             complement(34108..34434)
                     /locus_tag="ACJJD2_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HGG7578915.1"
                     /translation="MNIKHLLLTSAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(34496..35215)
                     /locus_tag="ACJJD2_000301"
     CDS             complement(34496..35215)
                     /locus_tag="ACJJD2_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HGG7578916.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGQSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAVSSSGTNLSVEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            complement(35212..35334)
                     /locus_tag="ACJJD2_000302"
     CDS             complement(35212..35334)
                     /locus_tag="ACJJD2_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HGG7578917.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(35345..35809)
                     /gene="trmL"
                     /locus_tag="ACJJD2_000303"
     CDS             complement(35345..35809)
                     /gene="trmL"
                     /locus_tag="ACJJD2_000303"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HGG7578918.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(35874..36599)
                     /locus_tag="ACJJD2_000304"
     CDS             complement(35874..36599)
                     /locus_tag="ACJJD2_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HGG7578919.1"
                     /translation="MDFLSRWRRIADAPTIRRCVLCHGSSGVSDGICAGCRDDLAAYR
                     TDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIRTLKHLADLGM
                     VRPLANLMVQNPPDRLADECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGSERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            36598..37341
                     /gene="bioH"
                     /locus_tag="ACJJD2_000305"
     CDS             36598..37341
                     /gene="bioH"
                     /locus_tag="ACJJD2_000305"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HGG7578920.1"
                     /translation="MPDAVKKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTADEDYPEGLAAPALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGIIGRILPDLAR
                     CGTPSALQEALDAAERADARHLLDKIDVPVLLVFGSKDAITPPRMGEYLHRRLKGSRL
                     VVMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            37343..38131
                     /locus_tag="ACJJD2_000306"
     CDS             37343..38131
                     /locus_tag="ACJJD2_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7578921.1"
                     /translation="MNPQDKCWQVHRHLAEHADQRLTLVRNAPKHILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAVRKGGFWQRFTGKGVVQHCQSPTAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALETDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMSWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
BASE COUNT         8624 a         9821 c        10311 g         9475 t
ORIGIN      
        1 cctctttcag ttacagcagc ttgatccctt tcccttatcc aacgggggaa ggctaggata
       61 gggtggcttg caaatataca gaacaaggga caagagccac cctctctcca accctctccc
      121 tccgtacggg agggggtgga ttctcgcggg cgaagcccac gctacggtta gcctttaccc
      181 cagcacaaac aattcccgcc cgtgcgcctt cagccaactt ttagcattgt cggtatgcgg
      241 cgtcagcgtg ttcaccaaat gccaaaagcg cggactgtgg tcggggtggc ggaggtggca
      301 gagttcgtgg atgcagacat agtcggcgac gtattcgggc gtgccgatca gccgccagtt
      361 gaggcggatg ccggtgtgcg ggcggcatac gccccaaaag gttttggcgt tgctcaggtc
      421 tgtggcggtg ggcgtcagtc ctgtttcggc tgcgtgtttt tcaaggcggg gcagcaggta
      481 ttcgcgggcg cgttcgttca acaggcggcg caggtggtcg atttgtgcgg cggtttcttt
      541 tcggggaagc aggatttcag acgacgtgat acggatatgg ctttggctgt gggtatccag
      601 cttggtcttt attccccgat accaaatcca ctcgggtaag tttgggtggg aaacaggatg
      661 cacgggcgtt ttggcaagcg tgttccgcaa aatcgtttcg tttgccgcca gccagtttgc
      721 taacgcgtgg tcttgaaaaa agggtgggac gttgatgctg accgtctgca tattgacggg
      781 gcgcagaatc agatttttct tggcactgcg tttgagttcg atttcgatgc acaaaccgtc
      841 ggaaagagta taggtgaagc gtttcatagt tgtgaatggg tttcagaccg gatacatcgt
      901 ctgaaacagg aattttccat atcaggcggc aaacttcgga taatatacaa aatcaaacat
      961 ctgcgctaca aggttcagcc gaacaagccg ccgatatatt tgctgatggt gatggcgctg
     1021 agtactgcca tcaaaccgac cacaatcacg ccggaaacgg tgagccacag cgggtgtttg
     1081 tagtcgccga caattttggt tttgtaggcg gcaatcagaa tcagaccgag ggaaatcggt
     1141 aaaatcaggc cgtttaatgc gcctacgaac accagcacct gcgccggttt gccgatggtg
     1201 gaaaatacgg cggtggacac ggcgataaag gcaataatcc atttgttttt attgcgttcg
     1261 atagacgggc tgagaccgga gaagaacgac accgaagtat aagccgcacc aatcaccgaa
     1321 gtaatcgaag ccgcccaaat caccacgccg aaaatcagca ggccgatgta tcccgccgca
     1381 tattcaaacg gtgtggaagc agggttgtcg ggattgagct gtacgccttg gctgaccacg
     1441 cccaaaaccg ccaaaaacaa tacaatccgc ataatcgagg caatcaggat cgcccgcacc
     1501 gagctttggc tcacttccgg caacgccgat ttgcctttga tgcctgcgtc cagcagacgg
     1561 tgcgcaccgg cgaaggtgat gtagccgccg accgtgccgc ccaccagtgt aacaatcgcc
     1621 attgcatcga gtttttccgg cataaaggta tgcacggcgg catctgccag cggcggattc
     1681 gcctgccatg ccacataaac cgtcagcgca atcattacga aacccatcac ttgggcgaat
     1741 ttgtccatca ctttgcctgc ttctttaaac agaaacacac cgatggcaat cacgccgctg
     1801 atcacggcac cggtttccgg cgacagtccg gtcagcaggt tcagacccaa gcctgcgccg
     1861 ccgacgttgc caatattgaa cgccaaaccg cccatcacaa tcagcacagc caagaaatag
     1921 cctgcgccgg gcaagacctg attggcaata tcctgcgcct gtttttcgga aacggcgaca
     1981 atccgccaaa tattgagctg cgccccgatg tcgagcagaa tcgagagcag aatcacaaag
     2041 ccgaaacttg ccgccagtgc ttgggtgaag gtggcggttt gggtcagaaa gcccgggccg
     2101 atggcggaag tcgccatcag gaatgcagcg ccgattaagg catttctgcg gtttttttga
     2161 ttagacataa tcgcttatcc tctataaaat tggttgttgc tgtgtttggg cgaaacctgc
     2221 ggttttagct acgcagaaac tcgctttgct cgttttggcg aaacctgcgg ttttcagacg
     2281 gcctatgaac tgtttttcaa gcagaaactt tgatgcctgc cgccagtagt tcctgccgga
     2341 ttttttcggc aaacaccacg gcgtgcggcc cgtctccgtg cagacagatg ctgtcggctt
     2401 gcacggcaac caggctgccg tccactgctt tgacctgccc gtcccgcacc atctgcaata
     2461 cttgggcgat ggcttcttcg tcgctgtcca cctgcgcatc ggggcggctg cggggaacca
     2521 gcgtaccgtc gggcatatag cggcggtcgg cgaatacttc ggaaatcaca cccaagcctg
     2581 cggcttttcc ggcttccaag agcaggctgc cggaaagtgc catcaatttc aatttcgggt
     2641 cgaaatccgc cacaattcgg gcaacggtat ccgccagcgc acggtttttc gccgcttggt
     2701 tgtacattgc gccgtgcggt ttgacataag ccatttccaa accctgatca cggcacaagg
     2761 cctgcaatgc gcccaactgg taattcagac acgcccgcaa atcggcttcg gacagattca
     2821 tttcggtacg gccgaagttt tcccgatcgg gatagccggg gtgtgctccg atgcgcacgc
     2881 cgttttgttg ggcatacgcc aatgccgccc gaatatcggc aatgctgccg gcgtgttggg
     2941 cgcaggcgat gttggccgaa gtaatcagct gcaacaaggc ttcgtcgctg ccgcagcctt
     3001 cggcgagatc ggcgtttaaa tcaacctgct tcatgggtga ttctccgtat ttggttcaga
     3061 taggcttggt ttttgcgccg cagggcggtg gcttctttca agccgattat tttgaatttg
     3121 actttgctgc cgaagcgcac ctgtgccagc ctgcccaaat cggcggcggc aacggtagcg
     3181 attttcggat aaccgccggt ggtttgcgca tcggccagca ggataatcgg tttgccgccg
     3241 ggcggcacct gcacggttcc tgcctgaaca gcgtgggaca gcatttccaa aggttgcgac
     3301 agggtcagcg gctgtccgtc gaagcggtag cccatgcggt tgctatcgct ttgcagcgtc
     3361 cacgtttccc gttccagatt cagacgccct ttttcactga aagcggcata ttccgacgaa
     3421 ggaacaaggt ggacggtatc ggtaaacggt atcggggcaa tgccgacttt ggacaattcc
     3481 tgcgcacctt tgccgatggg gagataatcg cctttttgca gcattctgcc ctgatggccg
     3541 ccgaaaccgg ctttcaggtc ggtacttctc gaacccatca cttccggcac atcaaatccg
     3601 cccgccacgc acacatagcc gtacatgccc tgcacggcac gcaccatttt caaggtctgc
     3661 cctttgcggg cggtataacg ccaatacgaa tagaccggtt cgccgtccaa ttccgcctga
     3721 tacacggcac cggtgagaca aaacggcgta tcccgttcaa acaccagcat tatcccgccc
     3781 aaagcgattt cgattgcggc cgtgccttcg tcgttgccca ataaaatatt gcccgccgcc
     3841 aaagcaaccg tgtccatcgc accggcatga ccgatgccgt aacgccggtg tccgtagcgt
     3901 ccggtatcct gaatatgcgc cggtgcctgc actgccgaaa catgaatcat ggctcaatcc
     3961 tttctgcaac aaagcggact tggtcacccg ccgccagcag ggtcggcgga ttcaaatcgg
     4021 ctcggaacaa gggtaattcg gttctgccga taatctgcca gccgccgggc gaagcgaacg
     4081 gatacacacc ggtctgactg ccgccgatac cgaccgaacc ggcaggaacg gacgttctcg
     4141 gcacggcacg gcggggcgtg tgcaatgctt cgggcaagcc gcccagataa gggaaaccgg
     4201 gctggaagcc catcataaat acggtataag tttgcgccgt atggcggcgg acgatttcgg
     4261 aaataaccgt ctgatggaaa gcagcgactt ccgccaaatc cgggccgtat tcgccgccgt
     4321 agcagacggg aatttccacc agtttgccct gatggtctgt aacggcggtg tgttcccaca
     4381 catattgcaa ttcatcggca agcgtcgcca aatcggtatc gaaacgggta aacacggtca
     4441 gattgttcat gccgaccacc acttcctcaa tcctgtcgtg ctgcccgagc gcagcggcaa
     4501 acgcccacaa cttttgctgt ttgcccagtt cggaaggtgc attcagtcgg cagaccaaag
     4561 cggattcgct gattggtgtg atctctattc tcatttgttg ttcattttgg ttatgtttta
     4621 atgaatctat atgcaggggc ggcggtttgt caatatcttc tgtgctgcat catcaaaccg
     4681 tcgattggaa aagtgctgcc ctgccgctgc actttttcag acgaccttaa accgtttcta
     4741 ttaaaatagc gcattccact tttcagacgg catctctatg tttcccgacc aatccgcccc
     4801 caacctgctg caaggcttga atcccgaaca actttccgcc gtaacctggc cgccgcaatc
     4861 cgcccttgtg ctggcaggcg cgggcagcgg caaaacgcgc gtgctgacca cgcgtatcgc
     4921 atggcttttg caaaccggtc aggcaagcgt gcacagcatt atggcggtaa cgtttaccaa
     4981 caaagccgcc aaagaaatgc agacccgttt gggcgcgatg attcccgtcg acgtccgcgc
     5041 tatgtggctc ggcacgttcc acggcctctg ccaccgcttt ctacggctgc accaccgcga
     5101 tgccggtttg ccgtcttcct ttcaaatcct cgacggcggc gaccagcttt ccctcatcaa
     5161 acgcctgctc aaaagcctca acatcgccga agaaatcatc gcgccgcgtt cgctgcaagg
     5221 ctttatcaac gcgcaaaaag aatccggttt gcgcgcttcc gtcttgagtg cgcccgatcc
     5281 gcacacaagc cgcatgattg aatgctacgc cgaatacgac aaaatctgcc aacgcgaagg
     5341 cgtggtcgat tttgccgaac tcatgctccg cagctacgaa atgctgcaaa gcaacgaaat
     5401 cctgcgccag cattaccaaa accgcttcaa ccacattctc gtcgacgagt tccaagacac
     5461 caacaaactg caatacgcct ggctcaaact catggcgggc ggcaacgcgg cagtgtttgc
     5521 cgtcggcgac gacgaccaaa gcatctaccg cttccgtggc gcaaacgtcg gcaatatgac
     5581 cgcgctgatg gaagagttcc atatcaacgc gcccgtcaaa ctcgaacaaa actaccgctc
     5641 tgtcggcaac atccttgccg ccgccaatgc cgttatcgaa aacaacgacg aacgactcgg
     5701 caaaaacctg cgcaccgacg ccgaagcagg cgacaaaatt cgctactact ccgcctttac
     5761 cgacctcgaa gaagcccggt tcatcgtgga cgaaaccaaa gccctcgaac gcgaaggctg
     5821 ggatttggac gaaatcgccg tcctctatcg cagcaacgcc caatcccgcg ttatcgaaca
     5881 aagcctgttc cgcagcggca tcccttacaa aatctacggc ggcctgcgct tttatgaacg
     5941 ccaagaaatc aaacacgcgc tcgcctacct tcgcctcgcc gttaatcccg acgacgacaa
     6001 cgccctcttg cgcgtcatca acttcccgcc gcgcggcatc ggcgcacgca ccatcgaaaa
     6061 ccttcagacg gcctcaaacg aacaaggcat caccctttgg caggcagcct gcaacgccgg
     6121 cgcaaaagcc accaaagtcg ccgccttcgt ccgcctcatc gaagccctgc gcaaccaagt
     6181 cggacaaatg cccctgcccg aaatcatcgt cggcatcctc aaagacagcg gcctgaccga
     6241 acactacaaa acccaaaaag gtgacaacca agaccgcctc gacaacctcg acgaactcgt
     6301 caacgccgcc atcgagttca aacccgaaga cagcaacttt gaaatcctgc ctgaaaacat
     6361 ttcagacgat cccgccttcc ccatcctcgc tttcttgagc aacgccaccc tcgaatccgg
     6421 cgaaaaccaa gcaggcgtgg gcgaaaaagc cgtccaactc atgaccgtcc acgccgccaa
     6481 aggcttggaa ttcaacgccg tcttcctcac cggtatggaa gaaggccgtt tccccagcga
     6541 aatgagcctt gccgaacgcg gcggcctcga agaagaacgc cgcctcatgt acgtcgccat
     6601 cacccgcgcc cgcaaacgcc tctacatcac catggcgcaa caacgcatgc tgcacggaca
     6661 aacccaattc ggcatcgtct cccgcttcgt cgaagagatc ccacccgaag tattgcacta
     6721 cctgtccgtc aaaaagaccg cctacgacag ctacggcagc ccgcgccaaa ccgccgcatc
     6781 caaagacaaa atcatcgacg actacaaaca gccccaaacc tacgcaggtt tccgtatcgg
     6841 acaaaacgtc cgccacgcca aattcggcac cggcgtgatt atcgatgccg cagataaagg
     6901 cgaatccgcc cgactgacca tcaacttcgg caaacagggc gtgaaagagt tggataccaa
     6961 gtttgcgaaa ttggaagcga tgtaaatttg aaatgcaggc tggatactcg tatccgacaa
     7021 aaatatttga cgcgtctatc gtttccgaaa aaccgctgtt ggaaaatgtc ggattcgaga
     7081 atccgaccta tggcaaaaaa ctgtagcaag gacaaggcaa aaggccgtct gaatccggta
     7141 acaacaaatt ttgccgaaac ctccgccgtc attcccgcgc aggcgggaat ccagaccttt
     7201 cggcacggga acttatcgga taaaaggttt ctttagattc cacgttctag attcccgcct
     7261 gcgcgggaat gacggacggt aaaagccggg tatagatacc taacccttgt ttatagctga
     7321 aaatcaataa ggaagaacat tatgtcccaa gtttttaaag attttgattt gtcctccgta
     7381 tgggaatccg acagttgggc agatgaaaac tacaaagaag ccccgtttac ccctgaaatt
     7441 ttggctgccg tagaaagtga actgggctat aaattgccgc aaagttttat tgaattgatg
     7501 gcggtacaaa acggcggaat atttgtcaaa aactgttttc cgaccacaca gagaaattcg
     7561 tgggcgaaag atcatgtgca aatttgcgag gtatcgggca tcggctttga aaaagaaggg
     7621 agtttgtgcg gcgaaacagg gcaaaaactt tggatggaag aatgggaata tccgcccatc
     7681 ggcgtgtatt ttgccaacga cccgtcaggc ggtcatgcca tgtttgcctt ggactatcgg
     7741 gagtgtggaa aagacggcga gccgaaagtg gtgtttgtcg agcaagaatc ggattttgaa
     7801 atcgtcgaac ttgcccccga ttttgaaacc tttatccgca gcttgcggca tgaagatgag
     7861 tttattgacg aggaaatata aaacggcggt tgaaaaaccg gaatcatcaa gggaaaacgg
     7921 gcgaaataac ggataatcgc ttgaatccgt aaggaaaacg gtttggtgga acgcgccatc
     7981 caagaccttt gcaaagaaaa actgtctccg acagcattga cattattaac agaacttatc
     8041 aagtttggag ctatctcaaa tataattcgg ttatcctttt gtatccatta aatcatatgc
     8101 ttcaattaat tgttgttcta gctcttgtac caattttgaa ttgcgaattc ctgacacaat
     8161 ctcaaattct tctgcatcta tgcaaacacc tgcataaatt tcaataacaa gggaacgcaa
     8221 taattgaagc tcttctcttg ttaaagaaat aataatgtca tcacctgtgt aattgattat
     8281 attcataata attttatttt tgtttgtcaa agtaagtttt gcctaaggtt ggtctaaatg
     8341 cagttccacc atcttttgaa tttgggtctc tgattacaat tgctccagac ttatcatccc
     8401 aaattgctct tatgtgtttg gattgtaatc ttcgaattcc caagaaaaaa atcgtaataa
     8461 gtttgaaagt gtcaaatccc aagtttcttt tgagcaatat tctaatattt tatcaatttc
     8521 acttttaata atcttatgat caaactgttc taatattaat gcattagacc aaaaaaaacc
     8581 ttctttatta caatgatggg aaatccattt aggagaacaa atgcaaagtg aaaaaataga
     8641 tgagccttgt tctccttcga ttccgatatc caaatctatc catctatgga aattatctgg
     8701 aatttcgggg gtaaattttt caaaatcaat atcatataaa tttatgcttt ttaaatccaa
     8761 tttaatcatt agggctgtcc tagataaata gggaaattca aattaagtta gaattatccc
     8821 tatgagaaaa agtcgtctaa gccggtataa acaaaataaa ctcattgagc tatttgtcgc
     8881 aggtgtaact gcaagaacag caacagagcc tgacagcatt gtttatacgg attgttatcg
     8941 tagctatgat gtattagatg tgagcgaatt tagccatttc cgtatcaatc acagcacaca
     9001 ttttgctgaa cgacaaaacc atatcaatgg aattgagaat ttttggaacc gggcaaaacg
     9061 tcatttacgc aagtttaacg gcattcccaa agcgcatttt gagctgtatt taaaggagtg
     9121 cgaatggcgt tttaacaaca gtgagataaa agttcaaatt tccattttaa aacaattagt
     9181 aaaatcgagt ttatcttagt tgtccaggac agccccatta tttttataac accgtgaagc
     9241 cgcacagcag tttgaacagt gatacgccgt ttgcgggctt acgagtttat tttcccggcc
     9301 tgcagtttga gcaatacggt gatttcctac ggttaataca aatgtttaca cattgataca
     9361 tttcatttat agttccgcct atttgaaaat agaaaatatg aattcgaccg caagtaaaac
     9421 cctgaaagga ttgtcgctgg tgtttttcgc ctctggattc tgcgccctga tttaccaggt
     9481 cagctggcag aggcttctat tcagtcacat aggtatcgat ttgagttcga ttactgtcat
     9541 tatttctgta tttatggtcg gcttgggtgt aggtgcgtat ttcggtggac gcattgctga
     9601 ccgttttcct tcaagtatca tccccctgtt ttgcatcgct gaagtatcca tcggtctgtt
     9661 cggtttggta agcaggggtc tgatttccgg cttggggcat cttttagttg aggctgattt
     9721 gcccatcatc gctgctgcca atttcctctt attgctgctt cctaccttta tgatgggcgc
     9781 gaccttgccc ttgctgacct gtttttttaa ccggaaaata cataatgttg gcgagtctat
     9841 cggtacctta tattttttca acactttggg tgcggcactc ggatcgcttg ccgccgccga
     9901 atttttctac gtctttttta ccctctccca aaccattgcg ctgacagcct gctttaacct
     9961 tctgattgct gcttcagtat ggctgcgtta cagaaaggat ggatatagtg aacactaaac
    10021 cgaatactag tttgatttat atgctttctt tccttagcgg cttattgagc ttgggtatag
    10081 aagtcttgtg ggtaaggatg ttttcgttcg cagcacagtc cgtgcctcag gcattttcat
    10141 ttactcttgc ctgttttctg accggtatcg ccgtcggcgc gtattttggc aaacggattt
    10201 gccgcagccg ctttgttgat attcccttta tcgggcagtg cttcttgtgg gcgggtattg
    10261 ccgacttttt gattttgggt gctgcgtggt tgttgacggg tttttccggc ttcgtccacc
    10321 acgccggtat cttcattacc ctgtctgccg tcgtcagagg gttgattttc ccgctcgtac
    10381 accatgtggg tacggatggc aacaaatccg gacgacaggt ttccaatgtt tatttcgcca
    10441 acgttgccgg cagtgcattg ggtccggtcc ttatcggctt tgtgatactt gatttcttgt
    10501 ccacccaaca gatttacctg ctcatctgtt tgatttctgc tgctgtccct ttgttttgta
    10561 cactgttcca aaaaagtctc cgactgaatg cagtgtcggt agcagtttcc ctaatgttcg
    10621 gcatcctcat gttcctactg ccggattctg tctttcaaaa tattgctgac cgtccggata
    10681 ggctgattga aaacaaacac ggcattgttg cggtttacca tagagatggt gataaggttg
    10741 tttatggggc gaatgtatac gacggcgcat acaataccga tgtattcaat agtgtcaacg
    10801 gcatcgaacg tgcctatctg ctaccctccc tgaagtctgg catacgccgc attttcgtcg
    10861 ttggattgag tacaggttcg tgggcgcgcg tcttgtctgc cattccggaa atgcagtcga
    10921 tgattgttgc ggaaatcaat ccggcatacc gtagccttat cgcggacgag ccgcaaatcg
    10981 ccccgctttt gcaggacaaa cgtgttgaaa ttgtattgga tgacggtagg aaatggctgc
    11041 gtcgccatcc tgatgaaaaa ttcgacctga ttttgatgaa tacgacttgg tactggcgtg
    11101 cctattccac caacctgttg agtgcggaat ttttaaaaca ggtgcaaagc caccttaccc
    11161 cggatggtat tgtaatgttt aataccacgc acagcccgca tgcttttgct accgccgtac
    11221 acagtattcc ctatgcatac cgctatgggc atatggtagt cggctcggca accccggtag
    11281 ttttccctaa taaagaactg ctcaagcaac gtctctcccg gttgatttgg ccggaaagcg
    11341 gcaggcacgt atttgacagc agcaccgtgg atgctgcagc acaaaaggtt gtctctcgta
    11401 tgctgattca gatgacggaa ccttcggctg gggcggaagt cattaccgac gataatatga
    11461 ttgtagaata caaatacggc agagggattt aaccgtctta aagggtttca ggcaacgcag
    11521 gttttaggta acgtcctgct agttcaaaaa aaccgcatca cagcagtcgg gacaaaatgg
    11581 tttaaacatt ttgtcccgaa ttcttattcc tatatatagt ggattaacaa aaatcaggac
    11641 aaggcgacga agccgcagac agtacagata gtacggaacc gattcacttg gtgcttgagc
    11701 accttagaga atcgttctct ttgagctaag gcgaggcaac gccgtactgg tttttgttaa
    11761 tccactatac cacgaattac ggtgtaaaaa tttatatgac cttataaaat caaataagaa
    11821 tcgttatcat aacatgattg tatttattgg gtttttttgg gcgttttgcc gatatttacc
    11881 ttttaatggt ttttgaaatt cgctaaaata cgaaattatt gtagaaattt tgttaacgga
    11941 tttgggtgta accatgttgt ccgcttactt tcccgtcttt gtctttatcc tcgtcggcct
    12001 cgcggccggc gtactgttta tcctgctcgg cacgatttta ggcccgaaac gccactatgc
    12061 cgaaaaagac gcgccttacg aatgcggttt cgaagccttt gaaaatgcga ggatgaagtt
    12121 tgacgtgcgc tattacctcg tcgccatcct cttcatcctg tttgatttgg aggtcgcgtt
    12181 catgttgccg tgggcagttg tgttcaaaga tttgggcgcg tacggcttct ggtctatgtt
    12241 ggtgtttatc gtcgttctga cggtaggctt tgtttacgaa tggaaaaaag gtgcgctgga
    12301 atgggaatag aaggcgtttt gaaaaaaggt ttcatcacca ccagcgcgga tacggtgttg
    12361 aactatatgc gtaccggttc gttgtggccg gttactttcg gcttggcctg ctgcgccgtg
    12421 gaaatgatgc atgcgggtat ggcgcgttat gaccttgacc gtttcggtat cattttccgt
    12481 ccgtccccac gtcaggccga cctgatgatt gtggcaggta cgctgaccaa caaaatggcg
    12541 ccagccctgc gccgtgtata cgaccagctc gccgagccac gctgggtatt gtctatgggc
    12601 tcgtgtgcca acggcggcgg ctattatcac tattcttatt ccgttgtgcg cggtgccgac
    12661 cgcgtcgtgc cggtagacgt ttatgtgccg ggttgtccgc cgactgcgga agccctgatt
    12721 tacggcctga ttcagctcca acaaaaaatc aagcgcactt ccaccatcgc gcgtgacgag
    12781 taagaggagg aagatatggc aagcattcaa aacttatacg aaaccgtcag ccgcgttttg
    12841 ggcaatcagg caggcaaagt catttcagct ttgggcgaga ttaccgtcga gtgtctgccc
    12901 gaacactata tttcagtcat gaccgcattg cgcgatcatg aagagctgca tttcgagctt
    12961 ctggtcgatt tgtgcggtgt cgattacagc acttacaaaa acgaagtatg gcagggcaaa
    13021 cgctttgccg tcgtcagtca gttgctttcc gttaaaaaca atcaacgcat ccgcgtacgc
    13081 gtctgggttt cagacgacga cttccctgta gtcgaatccg tagtcgatat ttacaacagc
    13141 gcggattggt acgaacgcga agccttcgat atgtacggca tcatgttcaa caaccacccg
    13201 gacctacgcc gcatcctgac cgattacggt ttcgtcggac atccgttccg caaagacttc
    13261 ccgatttccg gctatgtgga aatgcgttac gacgaagagc aaaaacgcgt gatttaccaa
    13321 cctgttacca tcgagccgcg cgagatcacg ccgcgtatcg tccgtgagga gaactacggt
    13381 ggccaataaa ttaagaaact acaccatcaa cttcggcccg caacaccctg cggcgcacgg
    13441 cgtattgcgt atgattttgg agctggacgg cgaacaaatc gtccgtgccg acccgcatat
    13501 cggcctcctg caccgaggta ctgaaaaact ggctgaaacc aaaacctatc tgcaagccct
    13561 gccctatatg gatcgcttgg actatgtttc catgatggtc aacgagcagg cgtattgctt
    13621 ggcagtagaa aaacttgccg gtatcgatgt acctatccgc gcccaatata tccgcgtgat
    13681 gttcgccgaa gtaacgcgca tcctcaatca tttgatgggc atcggttcgc acgcattcga
    13741 cattggtgcg atgaccgcca tcctttatgc cttccgcgac cgcgaagagt tgatggactt
    13801 gtacgaagcc gtgtccggcg cacgtatgca cgcagcctac ttccgtcccg gcggcgttta
    13861 ccgcgacctg cccgacttca tgcccaaata cgagggcagc aaattccgca atgccaaagt
    13921 attgaagcag ctcaacgaat cccgcgaagg cacgatgctc gactttatcg atgccttctg
    13981 cgaacgtttc ccgaaaaaca tcgacacact cgaaaccctc ctgaccgaca accgtatttg
    14041 gaaacagcgt accgtcggca tcggcgtcgt ctcccccgaa cgtgccatgc aaaaaggctt
    14101 taccggcgtg atgttgcgcg gttcgggcgt ggaatgggac gtgcgtaaga cacagcctta
    14161 cgaagtgtac gacaaaatgg atttcgacat ccctgtcggc gtgaacggcg actgctacga
    14221 ccgctacctc tgccgtatgg aagaaatgcg tcaatccgta cgcatcatca aacaatgttc
    14281 cgagtggttg cgtgtcaatc cgggtccggt cattaccaca aaccacaaat ttgctccgcc
    14341 caaacgtacc gaaatgaaaa caggtatgga agacctgatt caccatttca aactctttac
    14401 cgagggtatg cacgttcccg agggcgagac ctacaccgct gtcgaacatc cgaaaggcga
    14461 gttcggcgtt tacatcattt cagacggcgc aaacaaaccc taccgcctga aaatccgcgc
    14521 acccggcttc gcccatctgc aaggcatgga cgaaatggca aaaggccaca tgctcgccga
    14581 cgtcgttgcc atcatcggta cgcaggacat cgtattcggg gaggttgacc gataatgtta
    14641 tccgcagaat ccttaaaaca aattgatatt gagttggcaa aatatcctgc cgaccaacgc
    14701 cgctctgcca ttatgggcgc attgcgtatt gcacaaaccg aaaaaggctg gctcgccccc
    14761 gaaaccatcg cctttgttgc agactatatc ggcatctcgc ctgcacaagc ctacgaagtc
    14821 gctaccttct acaatatgta cgaccttgag cctgtcggca aatacaaact gaccgtttgt
    14881 accaacctgc cctgcgccct gcgcggcggt atggcaaccg gcgaatacct caaacaaaaa
    14941 ctcggtatca gctacggcga aaccacgcct gacggcaaat ttacccttgt cgaaggcgaa
    15001 tgcatggggg cgtgcggcga tgctcctgtt atgttgttga ataatcataa aatgtgcagc
    15061 tttatgactg aagaggcgat tgagaagaaa ctggcggagt tggagtaggt cgtctgaaac
    15121 gacgatttaa acgtaggtcg gatacttgta tccgacagag tgggtaaaaa ggcaaaatgt
    15181 cggatttaag aatccgccct actgaaatac cgaaatgccg tcattcccgc gcaggcggga
    15241 atccaccggt aagattcggt ttctgaattt aataagacat tgcttaccat tgaggatgga
    15301 ttcccgcctg cgcgggaatg acggcagaca agcaagtggt cgagatccaa caaaaacgat
    15361 taaaggtcgt ctgaaaatat cgatttgata aactagattt tatttcagac gacgttacaa
    15421 gccggtacac aaagacatct taaggtcgtc tgaaacagcg gccgcaaccg atacgaaaac
    15481 aaacaggcac accaaaaatg gctatttacc aatcaggcgt gatttttgac caagtggata
    15541 ccgccaatcc cgattgctgg acattggacg aatacgtcaa acgtggcggt tataccgccc
    15601 tgcgtaaaat cctgtccgaa aacatctcgc aaaccgatgt gattgacgaa gtcaaaacct
    15661 ccggcttgcg cggtcgtggc ggtgcgggct tcccgaccgg tttgaaatgg agctttatgc
    15721 cccgttcttt ccccggcgaa aagtacgtcg tttgcaacac cgacgaaggc gagccgggta
    15781 catttaaaga ccgcgacatt attatgttca acccccatgc cctgattgaa ggcatgatta
    15841 tcgccggtta cgcgatgggc gcgaaagccg gttacaacta tatccacggc gaaatttttg
    15901 aaggctacca acgctttgag gccgctttgg agcaggcgcg tgccgcaggc tttttgggta
    15961 aaaatatttt gggttcggat tttgaattcg aactcttcgc ccaccacggc tacggtgcat
    16021 acatctgcgg cgaagaaacc gcattgcttg aatcgctgga aggcaaaaaa ggccagccgc
    16081 gctttaaacc gccattccct gcttcgttcg gcctgtacgg caaaccgact accatcaaca
    16141 ataccgaaac tttctcctcc gtttcattca ttatccgtga cggcggacag gcatttgccg
    16201 ataaaggtat tccgaatgca ggcggtacca aattattctg tatttccggc catgtcgagc
    16261 gtccgggcaa ctatgaagtg ccattgggca caccgtttgc cgaagtcttg aaaatggcag
    16321 gcggtatgcg cggcggcaaa aaactcaaag ccgtcattcc cggcggttcg tccgcgcccg
    16381 tattgcctgc cgacatcatg atgcagacaa atatggacta cgactcgatt tccaaagcag
    16441 gctcgatgct gggttctggc gcgattatcg tcatggacga agacgtgtgc atggtgaaag
    16501 cccttgagcg cctgagctac ttctactacg acgagtcttg cggccaatgt acgccttgcc
    16561 gagaaggcac cggctggctt taccgcatcg tccaccgcat cgtagaaggc aaaggtaaaa
    16621 tggaagattt ggatttgctg gattctgtcg gcaaccaaat ggcaggccgc accatctgcg
    16681 cccttgccga tgccgccgtc ttccccgtcc gaagctttac caagcatttc cgtgatgagt
    16741 ttgtgcatta catcgaacac ggcggaccga tgaaagagca taagtgggga gggtggtaat
    16801 ggtggaagct aaaattttta ttctatacgg tgcagccaac aaaggtaaga gtacgacact
    16861 caatacgctt tttaatcaga tttgtcggaa attttctaaa tttctagtct tttttgaaag
    16921 acatggaaac ggcttagatt ttgttgcagt atttgatcat gaaggtcaga ggattggttt
    16981 ttattcatct ggtgataatg aatacgaggt taggagaaat ttatacaaac tttattcgca
    17041 taattgtgat tttatttttg gcacgtcaag gacacggggt ggtagttgcg atgcagtagg
    17101 atgttatgca gagttattgc atggcgatgt aaatataatt aattggtgtg aaaagtttga
    17161 gcctacagat gaagacaatg agcgtgctgt taaagagtta tttaagtcat ttaaaaatat
    17221 aataaataag ttatagtttt agttggtttt atattggtta aaagcaaaat gctaaaaatt
    17281 taactttgcc gtcattcccg cgtaggcggg aatccatagt ggaatttaca gaacccgata
    17341 tttgaaaagc agttaccgaa aacccaagaa tggattcccg cctacgcggg aatgacggca
    17401 aggtggcagt aaacgtttta aacagtattg attgtcaatg aaactcaaaa ggccgtctga
    17461 aacccatttt tcagacgatc tccataaaaa attatttatc aaatacccgt aactaggaac
    17521 gaaccatgtt acaaatcgaa atcgacggca aacaagtatc tgtggagcag ggcgcgacgg
    17581 tgattgaagc cgcgcacaag ctcggtactt atattccgca tttctgttac cacaaaaaac
    17641 tttccatcgc cgccaactgc cgtatgtgtc tggtgaacgt agaaaaagcc ccaaaacccc
    17701 tgcctgcctg tgccacgccg gttacagacg gcatgattgt gcgtacgcat tcggcaaaag
    17761 cccgagaggc gcaggaaggc gtgatggagt tcctgctcat caaccatccg cttgattgtc
    17821 cgacctgcga ccaaggcggg gaatgccagt tgcaggattt ggcggtgggc tacggaaaaa
    17881 ccaccagccg ctacaccgaa gaaaaacgtt ccgtcgtcgg caaagacatg gggcctttgg
    17941 tttccgccga ggaaatgagc cgctgtatcc actgcacccg ctgcgttcgt ttcactgaag
    18001 aaatcgccgg tttgcaagaa attgcgatgg tgaatcgcgg cgaacactcc gaaatcatgc
    18061 cctttatcgg caaaacggtg gaaaccgagc tgtcgggcaa cgtcatcgat ttgtgtcctg
    18121 tcggcgcatt gaccagcaaa ccgttccgct tcaacgcgcg tacttgggaa ttgaaccgcc
    18181 gcaaatccgt ttccgcccat gacgctttgg gcagtaacct gattgtacaa accaaagacc
    18241 ataccgtccg ccgcgtactg ccgctggaaa acgaagcgat taacgaatgc tggttgtccg
    18301 accgcgaccg ttttgcctac gaaggcctgt atcacgaaag ccgtctgaaa aacccgaaaa
    18361 tcaaacaggg cggcgagtgg atggacgtgg attggaaaac cgcattggaa tatgtccgca
    18421 gcgcgattga atgtatcgcc aaagacggca accaaaacca agtcggcatt tgggcgaacc
    18481 cgatgaatac ggttgaagag ctgtatctgg ccaaaaaact tgccgacggc ttgggtgtta
    18541 aaaactttgc aacccgtttg cgtcaacaag acaaacgtct ttcagacggc attaagggtg
    18601 cgcaatggtt gggacaaagc attgaatctt tggctgacaa cgatgccgta ttggtagtcg
    18661 gcgcgaactt gcgcaaagaa cagccgctcc tgaccgcccg cctgcgccgc gccgccaaag
    18721 accgtatggc cttgagcgta ttggccggca gcaaggaaga attgtttatg ccgcttctgt
    18781 ttcaagaagc cgcacatccc gacgagtggg caggccgtct gaaaaacctg tctgccaatg
    18841 cggaacacgc cgttaccgcc agcctgaaaa acgctgaaaa agcagcggtg attttgggcg
    18901 cggaagtgca aaaccatcct gattacgccg ccatttatgc cgccgcgcaa gagctggcag
    18961 acgcgaccgg cgcagtgctg ggtattttgc cgcaagtcgc caacagcgtc ggtgcggatg
    19021 tcttgggcgt aaactccggc gagagcgttg ccgaaatggc aaacgcgccg aaacaggcag
    19081 tcttgctgct caacgtcgag ccggaaatcg atatggttga cggtgcaaaa gccgtggccg
    19141 cgttgaaaca ggcgaaaagc gtgatggcgt ttacaccgtt tgtcagcgaa acgctgctgg
    19201 acgtgtgcga cgtattgctg ccgattgcgc cgtttaccga aacatcgggc agcttcatca
    19261 atatggaagg ccgtctgcaa tcctttcacg gcgtggtaca aggcttcggc gattcgcgtc
    19321 cgatgtggaa agtgttgcgt gtattgggca acctgtttga cctgcaaggt tttgaatacc
    19381 acgataccgc tgcgattctg aaagatgcgt tggatgcgga aagcctgccg tccaaactgg
    19441 acaaccgcag cacatggaca ggggagggcg ttcagacggc atcagaccgc ctcgtccgtg
    19501 tcggcggcgt cggtatttat cacactgatt ctatcgtgcg ccgttccgca ccgttgcagg
    19561 caaccgtcca tgccgccgtg cctgccgcgc gtgtgaatcc gaacactttg ggacgcttgg
    19621 gcctgcaaga cggacaaacc gctgtcgcca aacaaaacgg cgcaagcgta tcggttgctg
    19681 tcaaagccga tgccggtttg cctgaaaacg tggtgcatct gccgctgcat accgaaaatg
    19741 ccgcgctggg tgcgttgatg gacactattg aactggcggg agcttgatca tgcaagaatg
    19801 gttccaaaac ctctttgccg caacgctcgg tctgggcgat ttgggcatca ccgtaggctt
    19861 ggtggtatcc gtcatcgtca aaatcgtgat tatcctgatt ccgctgattc tgaccgttgc
    19921 ctacctgacg tatttcgaac gtaaagtcat cggcttcatg cagcttcgcg tcggtccgaa
    19981 cgtaaccggc ccgtggggtc tgattcagcc gtttgccgac gtgttcaaac tcttgtttaa
    20041 agaggtaacc cgtccgaagc tgtcaaacaa agccctgttc tacatcggcc cgattatgtc
    20101 gcttgctccg tctttcgcag catgggcagt gattccgttc aacgaagaat gggtgctgac
    20161 caacatcaat atcggccttt tgtacatcct gatgattacc tcgctgtcgg tttacggcgt
    20221 gatcatcgcg ggctgggctt ccaactccaa atattcgttc ttgggtgcaa tgcgtgcttc
    20281 cgcacaaagc atttcctacg agattgccat gagtgccgcg ctggtgtgcg ttgtgatggt
    20341 atcgggcagc atgaacttct ccgacatcgt tgccgcacaa gccaaaggca tcgcgggcgg
    20401 ttccgtgttc tcgtggaact ggctgccgct cttccccatc ttcatcgttt atctgatttc
    20461 cgccgttgcc gaaaccaacc gcgcaccgtt tgacgtggca gagggcgagt ccgaaatcgt
    20521 tgccggacac cacgttgaat attccggctt cgcattcgcg ctgttcttcc ttgccgaata
    20581 cattttcatg attctgattg ccgcgctgac atcgctgatg tttctcggcg gctggttgtc
    20641 tccgttcccg caaagctggg gctttatcgg tacgccttcc gcattctgga tgtttgtgaa
    20701 aatggcggca gtgttgtact ggtatctgtg gatccgtgca accttcccgc gctaccgtta
    20761 cgaccaaatc atgcgtttgg gctggaaagt gctgattccg atcggcttcg cctacatcgt
    20821 gattttgggc gtgtggatga tttcaccgct gaatttgtgg aaataagttt cagacggcat
    20881 cttgaggccg tctgaacaaa gcgattttga atacctaacg aaatccctgt tttgagggaa
    20941 cataatatgg ctaacttagt aaaaaccttt ctgctcggcg agttggtaaa aggcatgggc
    21001 gtaacgctca aaaacttttt tgcccgcaaa gacacaattt attttcccga agagaaaacg
    21061 ccgcaatccg tgcgtttccg cggtctgcac gcgcaacgcc gttatccgaa cggcgaggaa
    21121 cgctgcatcg cgtgtaaatt gtgtgaagcc gtttgccccg caatggcgat caacatcgaa
    21181 tcggaagaac gcgaagacgg cacgcgccgc accaagcgtt acgacatcga cctgaccaag
    21241 tgcatcttct gcggtttctg cgaagaagcc tgcccgaccg atgcgattgt ggaaacccat
    21301 atttttgaat accacggcga gaaaaaaggc gacttgcaca tgaccaagcc gattcttttg
    21361 gccattggcg acaaatacga agctgaaatc gccaaacgca aagccgctga cgcgccgtat
    21421 cgttaaggag cagacgaatg actttttccg cgattctgtt ctatattctt gccgccatcg
    21481 ttttgtacgg tgcggttcgt accgttaccg ccaaaaaccc tgtccacgcc gctttgcatc
    21541 tggtgctgac cttctgcgtg agcgcgatgc tttggatgct gatgcaggcc gagtttttgg
    21601 gcgtgacgct ggtggtggtt tacgtcggcg ccgtgatggt gttgttcctg ttcgttgtga
    21661 tgatgttgaa catcgacatt gaagaaatgc gcgccggttt ctggcgtcat gcgccggttg
    21721 ccggtgtggt cggcacattg ttggcggttg ccctgatcct gattctggtc aacccgaaaa
    21781 ccgacctggc cgcatttggt ctgatgaaag acattccggc cgattacaac aatatccgcg
    21841 atttgggcag ccgtatttat accgactacc tgttgccgtt tgaattggcg gcggtattgc
    21901 tgctgttggg tatggtggcg gcgattgcgc tggtttaccg taaaaccacc aatccgaaac
    21961 gcatggatcc tgccgaccaa gttaaagtac gcgccgatca aggccgtatg cgtctggtga
    22021 aaatggaagc ggtcaaaccg caagtcgaat ctgccgaaga gagcgaagtt tcagacggcc
    22081 tcaagccgga aggggagggc aaagcatgat taccttgacg cattatctgg tattgggtgc
    22141 gctcctgttc ggtatcagcg caatgggtat ctttatgaac cgcaaaaacg tgctggtatt
    22201 gctgatgtcc atcgagctga tgctcttggc ggtgaacttc aactttatcg ccttctcgca
    22261 acatttgggc gatactgccg gacaaatttt cgtattcttc gtattgaccg ttgccgctgc
    22321 cgaatctgcc atcggtttgg cgattatggt attggtgtac cgcaaccgac aaacgattaa
    22381 tgttgccgat ttggacgagt tgaaagggta aaggtaggtt gggtcgagac ctgacaagac
    22441 accgatgccg tctgaaaacc cgataggaaa aacgatgaaa tccatagacg aacaaagcct
    22501 gcataatgcc cgccgcctgt ttgaaagcgg cgacatcgac cgtatcgaag tcggtaccac
    22561 cgcgggcctg caacagattc accgttacct gttcggcggc ttatatgatt ttgcgggtca
    22621 aatcagggaa gacaacattt ccaaaggcgg ttttcgtttt gccaacgcca tgtatttaaa
    22681 agaggctttg gttaaaatcg agcagatgcc cgagcggact tttgaagaaa tcatcgccaa
    22741 atatgttgaa atgaacattg cccatccgtt tttggagggt aatggcagaa gtacccgcat
    22801 ctggctggat ttggtgctga agaaaaacct gaaaaaaatc gtaaactggc aaaatgtaag
    22861 caaaaccctg tatttgcagg cgatggaacg cagccccgtc aacgatttag aactgcgctt
    22921 tctgttaaag gacaacctga ccgacgatgt ggacaaccgt gaaatcatct ttaaaggtat
    22981 cgagcagtcg tattattacg aagggtatga aaaaggctga gggtcgtctg aaaagcgatt
    23041 tcagactgtt tcagacgacc tgattcggta ggtgatcaga cgggagcgga tgagaaaaga
    23101 aattctgggt aagaataatc cggtctgaaa tattggaaga agaatgatgg ataaaaatca
    23161 gttagaacaa gaatttcata aagccatgtt aaatatttat caggaggctt tgaatttgcc
    23221 gcaaccttac aaggcgacac gatttttaca aattgtaaat gaatttggtg gtaaagaggc
    23281 ggcggataaa ttattaagta cgggggaaaa gaagactcag accggtttta cagagctgat
    23341 tctgagtggt ggcggagtcc acgccttgaa atacagtatg gaatatctgg tgttacaaaa
    23401 gccgtggtgt gatttattta ctgaagagca attagctgtg gcacgcaaac gattggagcg
    23461 tgttggattt gtttttccga agtaattttg tacgaaacaa acatagattt ttaaatcaat
    23521 cggattcaat caaatgaacg acatgacttt atatttgata attgcccttg ttccgttggc
    23581 aggctcgttg attgcgggtt tgttcggcaa caaaatcggt cgtgccggtg cgcatactgt
    23641 tacgatactc ggtgtggcgg tgtctgccgt gctgtcggct tatgtgctgt ggggattcct
    23701 caatggcagc cgtgccaagt ttgatgagaa cgtctatacc tggctgacga tgggcggttt
    23761 ggatttctcc gtcggcttct tggtcgatac gatgacggcg atgatgatgg tcgtggtaac
    23821 gggcgtatcg ttgatggtgc atatctacac catcggctat atgcacgatg aaaaagtcgg
    23881 ctaccaacgc ttcttcagct atatttcttt gtttactttc agcatgttga tgctgattat
    23941 gagcaacaac ttcatccagc tcttcttcgg ctgggaggct gtgggcttgg tgtcgtatct
    24001 cttgatcggt ttctatttca aacgtccaag cgcaacattt gccaacctga aagccttttt
    24061 gatcaaccgt gtcggcgact tcggcttttt gctcggtatc ggcttggtgc ttgcctattt
    24121 cggcggcagc ctgcgctatc aagatgtatt cgcttatctg cccaacgtgc aaaatgccac
    24181 catccagctt ttccccggtg tggaatggtc gttgattact gtcacctgtt tgctcctgtt
    24241 tgtcggtgcg atgggtaaat cggcacaatt cccactgcac gtttggctgc ctgattcgat
    24301 ggaaggcccg accccgattt ctgcattgat tcacgctgcg acgatggtta ccgccggtct
    24361 gtttatggta tcgcgtatgt cgccgattta tgagatgagc agcactgcgc tgtctgtcat
    24421 tatggtgatc ggtgcgatta ccgccctgtt tatgggtttc ttgggcgtga ttcaaaacga
    24481 catcaaacgt gtggttgcgt attccacctt gtcgcaactg ggctatatga ccgtggcttt
    24541 gggtgcgtct gcctattccg tggcgatgtt ccatgtgatg acccacgctt tctttaaagc
    24601 cttgttgttc ttggcggcag gcagcgcgat tatcggtatg caccacgacc aagacatgcg
    24661 ccacatgggc aacctgaaaa aatacatgcc gattacttgg ctgaccatgc tgatcggtaa
    24721 cttgtcgctg atcggtacgc cgttcttctc cggcttctat tctaaagatt cgattatcga
    24781 agcggcgaaa tacagcaccc tgccgggcag cggctttgcc tattttgccg tccttgccag
    24841 cgtgttcgtt accgcgttct acgcgttccg ccaatacttt atggtgttcc acggcgaaga
    24901 gaaatggcgc agcttgcctg aacatcatga cgatcatcat ggcgatcatc atggcgaaga
    24961 acatcacagc ttgggcaaaa acgacaatcc gcacgaaagc ccgttggttg ttaccctgcc
    25021 tttgattttg cttgccattc cgtccgtcat catcggctac gttgccatcg agcctatgct
    25081 ttacggcgat ttcttcaaag atgtgatttt cgtcaacgcc gacgcgcatc cgaccatgca
    25141 catcatgaag gaagagttcc acggcgcatt ggcaatggtg tcgcacagcc tgcattcgcc
    25201 tgtactctac cttgctatcg caggcgtgtt gagcgcatgg cttttgtacg tcaaactgcc
    25261 gcacctgcca gcgaaaattg cacagacgtt ccgtccgatt tacgttttgt ttgaaaacaa
    25321 atactacctc gacgccctgt atttcaacgt tttcgccaaa ggcacacgcg cattgggtac
    25381 tttcttctgg aaagtcggcg ataccgccat tatcgacaac ggcatcgtca acggctctgc
    25441 caaactggtc ggcgcgattg ccgcgcaagt gcgtaaagct caaaccggct ttatctatac
    25501 ctacgccgcc gctatggtgt tcggcgtatt ggtcttgctc ggtatgacct tctggggatt
    25561 gttcagataa ggatgaggtt tcagacggtc tcttaaaacg tcgtctgaca aaccaacccg
    25621 tacaacgata tttttatttt aaccacaggt taaccactat gttttccaac tacctactca
    25681 gcttggcaat atggataccc atcgccgcag gtgtgctggt tttgtcgacc ggtaaggaca
    25741 gccgtgcgcc gctggcgcgt gtgcttgcct ttatgggtgc gcttgccggt ttcttggtaa
    25801 cgctgcccct gtttaccggt ttcgaccgtt tgagcggcgg ctatcaattt accgagttcc
    25861 acgagtggat tccgcttctg aaaatcaact acgcattggg cgtggacggt atttcagtgc
    25921 tctttatcat cttgaatgcg tttattacgc tgctggtggt attggccggt tgggaagtta
    25981 ttcagaaacg cccggcgcag tatatggcgg cattcctgat gatgtcgggt ttgattaacg
    26041 gtgcgtttgc cgcgcaggat gcgattctgt tttatgtgtt cttcgagggt atgctgattc
    26101 cgctgtacct gattatcggt gtatggggcg gcccgcgccg cgtctatgcg tcggtcaagc
    26161 tgttcctcta tacgctgatg ggttcgctcc tgatgctggt tgctatggtt tacctgtact
    26221 atcaaacagg cagcttctct attgtcgatt tccaaaacat caaacagatt ccgttgggcg
    26281 tacaacagct tttatttgca gcgttcttcc tgtcatttgc cgtaaaagtg ccgatgttcc
    26341 ctgtgcacac ttggttgccg gatgcccacg ttgaagcgcc gaccggcggt tcgatggtgt
    26401 tggcggcgat tacgctgaag ctgggtgcgt atggtttctt gcgctttatc ctgccgatta
    26461 tgccggatgc ggcacgctat tttgcccctg tgatcattgt attgagcctg attgccgtga
    26521 tttacatcgg tatggtggct ttggtgcaaa ccgatatgaa aaaactggtg gcgtattcgt
    26581 ccatcagcca tatgggtttt gtcactttgg gtatgttcct gtttgtgaac ggccaattga
    26641 atgattgggc attgaaaggc gcaatcattc aaatgatttc ccacggtttt gtgtctgccg
    26701 cgatgtttat gtgtatcggc gtgatgtacg accgcctgca tacccgcaat attgccgatt
    26761 atggcggcgt ggtcaatgtg atgcctaagt ttgcggcgtt tatgatgttg ttcggtatgg
    26821 ccaatgccgg tctgccggcg acttctggct tcgtgggcga gtttatggtg attatgggcg
    26881 cggttaaagt gaatttctgg gtgggcgcgt tggcggctat gacgctgatt tacggtgcgt
    26941 cttataccct gtggatgtac aagcgcgtga ttttcggcgc gattcacaat ccgcacgttg
    27001 ccgaaatgaa agacatcaac tgtcgcgagt ttacgattct ggcggttttg gcggttgcgg
    27061 tattgggtat gggcctgtat ccgaacgcat ttatcgaagt ggtgcatcag gcggcaaacg
    27121 atttgattgc ccatgtggca caaagcaaga tttgaggtgt gtaaatgaac tggtctgatt
    27181 tgaatttaat gcccgccatg cccgaaatcg tgctgcttgc gctgctggtg ttattgttgc
    27241 tggcggactt gtgggtcagt gatgacaaac gccggtggac gcattacggc gcgttggcaa
    27301 cggtggcggt tacggctgtg gtgcagttgg cggtgtggga acagggcagc acgtcttcgt
    27361 tcaacgggat gtatattgca gacggtatgt cgcgtttggc aaaaatggtt ttatatgcct
    27421 tgatgtttac cctgtttgtc tatgccaagc cctacaacca agtgcgcggt attttcaaag
    27481 gcgagtttta caccctgtcg ctgtttgccc tcttgggtat gggcgtgatg gtgagcgcgg
    27541 ggcatttttt aactgcctat atcggtttgg aactcttgtc gcttgccctt tacgccctga
    27601 ttgccctgcg ccgcgattcc ggctttgccg ccgaagccgc cttgaaatat tttgttctgg
    27661 gtgcgctggc atccggcctg ctgctctacg gtatttctat ggtttacggc gcaaccggtt
    27721 cgctggaatt tgccggcgtg ctcgcctctt ccttcaatga agaagcaaac gaatggctgt
    27781 tgaaactggg tctggtgttt atcgtcgtcg ccgttgcgtt caaactcggc gcggtgccgt
    27841 tccatatgtg ggtgcccgac gtgtatcacg gcgcgcccac ttctgttacc gccctggtcg
    27901 gcactgcccc gaaaatcgcc gccgttgttt tcgctttccg catcctcgtt accgggttgg
    27961 gaaccgtgca tcatgactgg tctctgatgt ttgccctgct tgccgccgcc tcgctgctgg
    28021 tcggcaacct tgccgccatc atgcagacca atatcaaacg tatgctcgcc tattccaccg
    28081 tatcgcatat ggggtttatc ctgctggcgt ttatggcggg cgcggtcggc tttgcggcgg
    28141 gtctctatta cgccattacc tacgcgctga tggcggcggc agggttcggt gtgttgatgg
    28201 tgttgtcgga cggggacaac gagtgcgaaa acatcagcga tttggcaggg ttgaaccaac
    28261 accgcgtatg gcttgccttt ttgatgctgc tggttatgtt ctctatggcg ggcattccgc
    28321 cgctgatggg cttttacgcc aaattcggcg tgattatggc actcttaaaa caaggctatg
    28381 tttggttgtc cgtatttgcc gtcgtgatgt cgctgattgg cgcgttctac tacctgcgcg
    28441 tggtcaaagt catgtatttt gacgaatccg gccgcgcccg tcccgccgcc ggcggcaaca
    28501 atgccgcaaa attcctctta agcatcaacg cgctgctgtt ggtgctgtgg ggcattatgc
    28561 cgcaaaccgt tatcgactgg tgcgccaagg cgttggagaa cacgctgtaa gccgccgcaa
    28621 cggcagccgt gtcagaggct gccgtttttg ttaagatatg ccgttccgca atgcagttca
    28681 gacggcatcg ccgccgacaa tgcccaaaca gaaagcccac catgaccgca tccatgtaca
    28741 tccttttggt cttggcactc atctttgcca acgccccctt cctcaccacc agactgttcg
    28801 gcgtggccgc gctcaagcgc aaacatttcg gacaccacat gatcgagctg gcggcaggtt
    28861 tcgcactgac cgccattctt gcctatattc tcgaatcccg tgcaggatcg gtacacgatc
    28921 agggttggga gttttatgcc acagtcgtct gcctgtacct gatttttgcg tttccatgtt
    28981 ttgtgtggcg gtatttttgg cacacgcgca acagggaata gacaagcata gaaatgccgt
    29041 ctgaaacctg ttcagacggc atttgtttca ttcaagtgca ggccggcatc gctgtgccgg
    29101 cacgtttcag ccggcgatat acgccggttt taatatttgc gggcgactgc aaattctgcc
    29161 aactgccgca ggcgcagggc tttgtcgccg aagggttcga gcagcgcgac cgcttcggca
    29221 accagtttgt gtgcgtatga gcgcgccgct tccaagccca tcagtttcac ataagtcggc
    29281 ttgtcgttgt ctgcatcttt gcccgccgtc ttgcccaaag tcgccgtgtc cgcttcacaa
    29341 tccaacacat cgtcaatgac ttggaacgcc agccccagtt ttgccgcata atcgtccaat
    29401 accgccagac tgtcttcaga cagattcggg caggacatcg cccccaataa aaccgccgca
    29461 cggattagcg cacccgtttt caggctgtgc atctgttcca aatcggcttg aaccatttgt
    29521 ttgccgacat tcgccaaatc gattgcctga ccgcccgcca tgcccgcgct gccgcccgct
    29581 ttcgccaaca ccgacaacat tgccaactgg cgtgctgcgg gcagttctgt cggacggctt
    29641 aacacgtcga aggcttgggt ttgcaaagcg tcgccgacca gtagcgcggt ggcttcgcca
    29701 tatttgatgt ggcaggtcgg tttgccccga cgcaggctgt cgttgtccat tgccggcata
    29761 tcgtcgtgaa ccaacgaata ggcatggatc atttcgattg ccgccattgc ctgttctact
    29821 gcttcatgca cggcttcgcc taattccgaa gctgccagaa ccagcatcgg ccgcagacgt
    29881 ttgcccccat ccaaaaccgc ataacgcatg gcttcgtgca gtgtgtgcgg tatttcgttt
    29941 tcagacggca aaaagcgttc cagcagcagc tctgtttgcg cctgcgccct ctgttgccac
    30001 gctttcaaat cattcgtcgg attcaaggtt caactccttc ggcccgtccg cgtccaaaac
    30061 ctgtaatttc tgttcgactt gcgccagctt ggtttggcag tatctgacca gctcgttgcc
    30121 ttcctgatag gcggcaagcg cgtcttccaa gggcatttcg ccctgcatag cttgtgtcag
    30181 cgattcaagg cgcgacaagg cttcttcaaa cgatttcggg gcgtttttct tcatcgtgtt
    30241 tccttttcgg ttgaaacccc gccacttgga catctgtcct tcggggcggt agaatcagac
    30301 tttatttggg aggggtgtaa gcccttccaa atcaggacga cacatagggc ggtgctttaa
    30361 gtgtcgtcct gcgtgttgga acatagtttc ggatgttcca gtaaaaagcg gattgtagca
    30421 tttttgaaaa acggatgccg tctgaaaccc gaatccggct tcagacggca tttttccgcc
    30481 caggcggcaa ggcgttaccc gggcagttcg tcggtgatgc cctgcaaaaa ggcgaggcgt
    30541 tcggggcttg ccgccccggt ttgcgcggcg gctttgaagg cgcagccggg ttcggcgcgg
    30601 tgggtgcagt tgtggaagcg gcattgcccg acaaggtggc ggaaatcggg gaaatagcgc
    30661 ggcaaatcgg cggcttggag gtggtgtaaa ccaaattctt gcaaacccgg ggagtcgatg
    30721 agttgggttt cgccgttcaa atcataaagc cgggcgtggg tggtggtgtg ttttcccgag
    30781 tcgagtgcgg cggaaatgtc gccggtgcgg gcggtttggc tgcccaaaag ggcgttggtc
    30841 agggtggatt tgcccatacc gctctgcccg agcaggatgt tgctgtgccc ttgcagggcg
    30901 gggcgcaggc tgccggcgtt ttccagtgcg cgggtttcga tgacgggata acccagcgtt
    30961 tcgtagaatt tgagtttttc gcgccaaagg gcggtttcgg gcaggtcggc tttgttcagg
    31021 acgatgacgg cgcggatgcc ggcggcttcg gcggcaagca gggcgcgctg tagcagccgc
    31081 acgctcggac tcgggacggc ggcggttacg atgaggagtt gggtaacgtt ggcggcaatg
    31141 agtttggttt tccacgcgtc ttggcggtag agcaggcttt ggcgcggtaa aaaatcttca
    31201 atcacaactt gttcggcgtt gacggggctg atgcggacac ggtcgccgca ggcgaaatcg
    31261 acgcgttttt tgcgcgtgct ggcttcgtag gttgtgccgt cgggcgtgcg cacgatgtag
    31321 cggcggccgt agctggcggt aatttgggcg gtgtcgttca tggtttcttt ggggttgggt
    31381 gtggaaatgc cgtctgaaaa cgggtgttcg gacggcatcg gttcagtcgt gctgccactc
    31441 gacgtgttcg ttgaggaagc cgccgctctg gtgcgcccag agtttggcgt aaagcccgcg
    31501 tttttcgagg agttcggcgt gcgtgccttc ttcgatgatg cggcctttgt cgaggacgac
    31561 gagcctgtcc attgcggcga tggtggagag gcggtgggcg atggcgatga cggttttgcc
    31621 gtccatcatt ttgtcgaggc tttcttggat ggcggcttcg acttcggaat cgagcgcgct
    31681 ggtggcttcg tccaaaagaa gaatcggtgc gtctttgagc atcacgcggg cgatggcgat
    31741 gcgctggcgt tgaccgccgg agagtttcac gccgcgttcg ccgacgtgtg cgtcgtagcc
    31801 gcgccgccct ttggcatcgg aaaggtcggg gatgaagccg gcggcttcgg cgcgttcggc
    31861 ggcagaaacc atttcggcat cggtcgcgtc ggggcggccg taaataatgt tgtcgcgcac
    31921 ggaacggtgc agcagcgagg tatcttgcgt gaccaaaccg atttgggcgc gtaaagattc
    31981 ttgggtaacg ccgcttatgt cctgcccgtc gatcgaaacc gtgccgcttt gcggttcgta
    32041 gaagcgcaaa agcaggttga cgatggtgga tttgcccgcg ccgctgcgtc cgatcaagcc
    32101 gactttttcg cccgggcgga tggtgaggtt gaagccgttg agcagcggtt tgcccgcttc
    32161 gtagcagaaa tcgatgtgtt caaatttgat tgcgccttgc ggcacgttca gcggcagtgc
    32221 ccggggcttg tcgaggatgg tgtgcggttt ggacagggtt gccataccgt cgttgacggt
    32281 gccgatgttt tcaaacagcc gcgcggattc ccacatgatg tattgcgaca aaccgttgac
    32341 gcgcaacgcc atcgcggtgg cggtggcgac cgcgcccacg ccgacctgtc cgttgtgcca
    32401 aagccagatg cccagtgcgg cggtggagag ggtcagggag gtgttgacga tgaagctgca
    32461 cgaatgcagc agcgtcgcca gccgcatttg ggcgcgcacc gtaaccataa attcttccat
    32521 cgactgcttg gcataggcgg cttcacgcgc gccgtgggag aagagtttga cggtggcgat
    32581 attggaatag gcatcggtaa tgcggccggt catcagcgag cgggcatccg cctgccatgc
    32641 ggcggtttgc cccaatttgg gaatcagcag gcgcatcacc gaagcgaaac cgacaatcca
    32701 gccgataaag ggcagcagca gccatgagtc gagcgaggcg agaatcacgc cggaggtaat
    32761 gaaatacacc gacacataaa cgaccatatc ggcaaccgtc atcaccgcgt cgcgcaacgc
    32821 cagcgcggtc tgcatgactt tggcggacac gcgtccggca aattcgtcct gataaaaacc
    32881 gaggctttgg ttcagcatca ggcggtggaa gttccagcgc aggcgcatgg ggaacacgcc
    32941 ctgaagggtt tgcaggcgca cgttggacgc ggcaaacgcc cacgcaaccg aaaataccat
    33001 catcgccgcc attgccgcca gttcccaacc tttttcggca aacagttcgg cgggcgcgta
    33061 tttgccgagc cactccacga ttttgcccat aaattgaaaa accagggctt ccataatgcc
    33121 gatgccggcg gtcagcgcag ccagggcggc tatccatttc cgcacgccgg ccatgctgct
    33181 ccagacaaac cgccacaagc ctttttctgg cgttttcggg gcggcttcgg gataagggtc
    33241 gattcgggac tcgaaccagg aaaatatttt gttcaacatt gttttcgatt tcggtaaaac
    33301 agtttcagac ggcatcaaac acaatgccgt ctgaaaggaa ggacaataac gccattttac
    33361 gggaaaagcc gtcgggaaga cagcgcgagg cggaaacgca gggtttcgtc agggcaaacg
    33421 ccgcgccgcc ttcagacggc attatttcag caggtttttc aaagcaaggc gcacgccttc
    33481 gcccacgtcc gtcccctccg gaacgccttt gaccgccgct tttgcttcgc gttcgctgta
    33541 acccagcgca agcagcgtgc tgacgatgtc ttccgtttcg tcggcggcgg gtgcggcggc
    33601 aaacagcccg tccgttaccg tatgcgcgac cagcttgccg cgcagttcca agaccatacg
    33661 ttcggcggtt tttttgccga ttcccggcgc ggaagacagg cgtttgacat cttcttcggc
    33721 aaccgcccgc gccagctcgt ctgccgtcat cgctgacaaa atgcccaaag ccgttttcgc
    33781 gccgatgccg ccgaccttaa tcagttggcg gaaggtcttg cgttcttccg cagtggcaaa
    33841 accaaataaa agatgtgcgt cttcccgaat gataagctgg gtaaacagtt gtacgctttc
    33901 acccacgggc ggcaggttgt agaaggtctg catcgatacg tcggcctcat agccgacacc
    33961 gttgacatcg atgacgattt gcggagggtt tttttcaacc agtttgccgg tcagtctgct
    34021 gatcatgtgt gccgaatcct gaagtgtcgg gtgcaaaatg ccgtctgaaa ccggttcggg
    34081 cttcagacgg cacggattgt atcaaattca gtcgtcgcgg cgggaggaaa tcacgcggcc
    34141 ggtacgggca tcgacaacga ctttgtattc ctgtccgttt ttgacgattt cgacatcata
    34201 gtgcggacgg ccgttgtcgt gttcgagatc gatgtcggtg attttgccgc cgacacgcgc
    34261 caacgctgct ttttcggctt gggcgcggct gatgattttg tcttgtttgt tgtgttggtg
    34321 tgcggcgtgt ccgtggtcgt catcgccgtg tccgtcgtgg tgggcgagcg cgggggcgga
    34381 aatgctcagc agtgcggttg cggcggaggt caagagaagg tgtttgatgt tcatattttg
    34441 cctttgtaaa tcgtgggttg gaaaatgtgg atattaataa ggtatcaaat aaccgtcagc
    34501 cggcggtcaa taccgcccga accataccgc gtgcctgagc ttcggcttcg gcggcgcgtt
    34561 cctgcgaggc aaacggtccc attttgacga cgtattcgta acggcgtttt tcaaccgaga
    34621 ggttcgtacc cgatgacgaa acggcgaagt tttgggcggc ttggttcaga taggcttgtg
    34681 cttcgtgttc cgtaccgaaa gatttcaagt cgataaagat gtctttgttt tcggcaaccg
    34741 gtgcggattg gcccgggacg atttgttcga ttttgacgtg tgccgtccct tggttgacaa
    34801 agcccaattt ttgcgcggcg gctttggata cgtcgatgat gcggttgccg tggaaggggc
    34861 cgcggtcgtt gacgcggacg atgacgcttt tgccgttttt ggtattggtt acgcgcacat
    34921 agctggggat gggcagggtt ttgtgggcgg cggtaaaggc gttcatatcg tatcgttctc
    34981 cgccggaagt tttgcgcccg tgaaacctgc cgccgtacca cgaggcgttg ccggtttgcg
    35041 tgaattcggc gacttggttt ttcggcgtgt agcgttttcc ggcgactttg tagctgcggt
    35101 tggcggaggc gtgcagtttt tctgccttga ccactgcgtc ggcggatgcc gtctgaaggg
    35161 agtgtgtgcc gaatgcggcg gtgagaagga aaagggtttt tcgggttaaa gtcaaaacgt
    35221 gttccgttct tgagttgaag acgaatgggc atcatgcccg ccggatacgt tccgaaccgc
    35281 cgtacagtgc ggacggcggt tcggaatgtg tccggatagg ttttcagacg gcatgaactt
    35341 gcgttcaaac gccgcctgcg taaccgtgtt gccgccacgc ttcaaagaga atcacggcaa
    35401 cggtattgga aaggttcata ctccgactgc cgggctgcat gggcaggcgg attttttgcg
    35461 cggcgggcag gctgtcgagg atgtcggcag gcagtccgcg cgtttccggc ccgaacagta
    35521 aaacgtcgcc tttttgaaac gcggtttcat cggggcgcgc cgtgcctttg gtggtcaggg
    35581 cgaaaatgcg cctgcctgcg agtgccttga ggcagtcgtc gaagttttcg tgcaccgtca
    35641 ggctggcgaa ttcgtggtag tcgagcccgg cgcgtttcat tttggcggaa tccaatggga
    35701 agccgagcgg tttgacaagg tgcaaatccg cgccggtatt ggcgcacagg cggatgatgt
    35761 tgcccgtgtt cggcgggatt tccggctggt ataaaacgat ggtaaacata aatatcaatc
    35821 acttataggc gcgtaacctt gccacaaggc ggatggggtg tcaaaaaatt tagttatttt
    35881 ttcattggcg tgcgtgccag cgtccagcag cagatgcggt tcgcgcccga ttttttcagc
    35941 gtctttgcca gttcgtccag cgtcgcgccg gtggtaaaga catcgtcgat taacagaata
    36001 ttacagtttt ccggtatcgg tgtgcggatt tcaaaggcgt ttttgatgtt tcgccgccgt
    36061 tcgctgcctt tgagcgtgct ttgcggcggg cggtggtgtc ggaatacggt gtgtcggggc
    36121 agtatctgcc agccgtagcg ttgtgccaac aacccgacga tgctttcact ttggttgaac
    36181 ccgcgttgca gcagccgctc cctgcttagc ggtacgggca ggacgaaatc gaaacattcg
    36241 tctgcaagcc ggtcgggcgg gttttgtacc atcaggtttg ccaatgggcg aaccatgccc
    36301 aaatctgcca agtgtttcag cgtacgtatc atgttgctga cgggcggttc gtaatgcagc
    36361 gaagcccaca tccggtcgaa tgcgggcggt tttttctgac agccgccgca caccgcgccg
    36421 ccttggatgt gcctgaaaca cagggggcag ctgtttgccg cgtcggtgcg gtatgccgcc
    36481 aaatcgtcgc ggcagccggc gcagatgccg tctgaaacgc cggacgaacc gtggcataat
    36541 acgcaacgcc tgatagtggg cgcgtctgcg atgcgccgcc aacgagagag aaaatccatg
    36601 cctgatgccg tcaaaaaagt ttacctgata cacggttggg gggcgaaccg ccacatgttc
    36661 gacgatttga tgccgcgcct gcctgcaacg tggccggtgt ccgccgtcga tttgcccgga
    36721 cacggcgacg cgcccttcgc gcaacccttc gatattgagg cagccgccga cgctgttgcc
    36781 gcacaaatcg atacgcccgc cgacattctc ggctggtcgc tcggcggatt ggtcgcgctg
    36841 tatctggcgg cgcgccatcc cgacaaagtc cgttcgctct gcctgacggc gagtttcgcc
    36901 cgactgacgg ctgacgaaga ctatcccgaa gggcttgccg cgcctgcatt gggcaaaatg
    36961 gtcggcgcgt tccgttcgga ttatgccaaa catatcaaac agtttctaca actccagctt
    37021 ctgcacacgc ctgatgcgga cggaatcata ggcagaatcc tgcccgattt ggcgcgctgc
    37081 ggcacgccct ccgccttaca ggaagctttg gacgcggcgg aaagggcgga tgcgcggcat
    37141 ttgttggaca agatagatgt tccggtactg ctggtgttcg gtagcaaaga cgcgattacg
    37201 ccgccgcgca tgggcgagta tctgcaccgc cgtttgaaag gcagcaggct ggttgtgatg
    37261 gaaaaggcgg cacacgcgcc gtttttgagc catgcggaag cgtttgccgc gctgtaccgc
    37321 gactttgtcg aaggggtttg acatgaatcc gcaggacaaa tgctggcagg ttcaccgcca
    37381 tcttgccgaa catgccgacc aacggctgac actcgtccgc aacgcgccca aacatatcct
    37441 gcttgccggg gcggatgcgg acatcagccg cagcctgctg gcgaaacgat atccgcaggc
    37501 ggtatttgaa gaatacgatt cccgtgcgga ttttttggcg gctgccgcag ccgtgcgcaa
    37561 gggcggtttt tggcaaaggt ttacgggtaa gggcgtggtg caacactgcc aatccccgac
    37621 cgcgccgctg cccgaagcgt gtgccgatat gttgtggtcg aatctcggac tgttggcggc
    37681 ggaacaaatc cttcctgtgc tgcacaactg ggcgcgcgcg ctggagacgg acgggctgct
    37741 gttttttacc tgcttcgggc gcgacacttt taccgaactg aaatgccgtc tgaaagaaaa
    37801 cggcattgaa agccgcagcg tgatgtttcc cgatatgcac gacttgggcg atatgcttgc
    37861 tgaaaacggg ttttacgacc ccgttaccga tacggcgaag ctggtgttgg attacaaaaa
    37921 ggcggaaacg ttttgggcgg atatggacac gctgggcgtt tggcgggcga tgtcgtggaa
    37981 cgatgaaaac gccgcgcgtt cgtgtgtcgg gacaatattt gaacgggaag gcggtttgag
    38041 tattacgctg gaaacagtgt acggacacgc cgttaaaaaa ctgatgctgc cgcaagggga
    38101 gaacgtggtg cagttttttc cgaagagatg atgtgcagat gccgtctgaa gccgtttcca
    38161 agtttcagac ggcatttgtt tgtgaaaacc gacagaacta aaggaaatgc cgatgtatag
    38221 tgaattaaat t
//
LOCUS       DBBZXW010000006        36747 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.006, whole genome shotgun sequence.
ACCESSION   DBBZXW010000006 DBBZXW010000000
VERSION     DBBZXW010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36747
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.006"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(1..1183)
                     /locus_tag="ACJJD2_000307"
                     /pseudo
     CDS             complement(1..1183)
                     /locus_tag="ACJJD2_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1329..2033
                     /locus_tag="ACJJD2_000308"
     CDS             1329..2033
                     /locus_tag="ACJJD2_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HGG7578922.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNSFNRKLKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQTDASLEYTDFSVSRERRNEVIDQVSKDAILRFK
                     TRAEKLAGILGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAA
                     QGVEEISISVNGTVQF"
     gene            complement(2097..2663)
                     /gene="dcd"
                     /locus_tag="ACJJD2_000309"
     CDS             complement(2097..2663)
                     /gene="dcd"
                     /locus_tag="ACJJD2_000309"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HGG7578923.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEICKTSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2729..3145)
                     /locus_tag="ACJJD2_000310"
     CDS             complement(2729..3145)
                     /locus_tag="ACJJD2_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MORN repeat-containing protein"
                     /protein_id="HGG7578924.1"
                     /translation="MLKHLAFLLPAMMFALPTSAAVLTSYQEPGCTYDGGVGKDGLPS
                     GKGIWRCRDGRGYTGSFKNGKFDGQGVYTVSANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIQEVKLPKNK"
     gene            complement(3207..4106)
                     /locus_tag="ACJJD2_000311"
     CDS             complement(3207..4106)
                     /locus_tag="ACJJD2_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HGG7578925.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     AAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4137..5594)
                     /gene="der"
                     /locus_tag="ACJJD2_000312"
     CDS             complement(4137..5594)
                     /gene="der"
                     /locus_tag="ACJJD2_000312"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HGG7578926.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL
                     ENFPEPEVEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREDRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5744..6373)
                     /locus_tag="ACJJD2_000313"
     CDS             complement(5744..6373)
                     /locus_tag="ACJJD2_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HGG7578927.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFS
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6374..7669)
                     /gene="hisS"
                     /locus_tag="ACJJD2_000314"
     CDS             complement(6374..7669)
                     /gene="hisS"
                     /locus_tag="ACJJD2_000314"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HGG7578928.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQVFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7798..8454)
                     /locus_tag="ACJJD2_000315"
     CDS             complement(7798..8454)
                     /locus_tag="ACJJD2_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HGG7578929.1"
                     /translation="MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKA
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMP
                     DLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSM
                     SRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFTHHPKRQTEFAVGQIRQARAE
                     "
     gene            complement(8512..8703)
                     /locus_tag="ACJJD2_000316"
     CDS             complement(8512..8703)
                     /locus_tag="ACJJD2_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578930.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIGSAWHFLDAACWISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(8736..9272)
                     /locus_tag="ACJJD2_000317"
     CDS             complement(8736..9272)
                     /locus_tag="ACJJD2_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578931.1"
                     /translation="MKKIIDSKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(9440..9598)
                     /locus_tag="ACJJD2_000318"
     CDS             complement(9440..9598)
                     /locus_tag="ACJJD2_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578932.1"
                     /translation="MKTFEKTWSAQYRDMEISVRNFWNLERTGAEVYINGRRVYHNEA
                     EMASASLR"
     gene            complement(9755..10174)
                     /locus_tag="ACJJD2_000319"
     CDS             complement(9755..10174)
                     /locus_tag="ACJJD2_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578933.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGEWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMYSGLNLNQYGVASP"
     gene            complement(10232..10597)
                     /locus_tag="ACJJD2_000320"
     CDS             complement(10232..10597)
                     /locus_tag="ACJJD2_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578934.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(10579..11124)
                     /locus_tag="ACJJD2_000321"
     CDS             complement(10579..11124)
                     /locus_tag="ACJJD2_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578935.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
     gene            complement(11287..11560)
                     /locus_tag="ACJJD2_000322"
                     /pseudo
     CDS             complement(11287..11560)
                     /locus_tag="ACJJD2_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12122..12595)
                     /locus_tag="ACJJD2_000323"
     CDS             complement(12122..12595)
                     /locus_tag="ACJJD2_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578936.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            complement(12638..13507)
                     /locus_tag="ACJJD2_000324"
     CDS             complement(12638..13507)
                     /locus_tag="ACJJD2_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HGG7578937.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAALVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNSKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGKQPDRIDGKKESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKLGVQHTF"
     gene            13671..14594
                     /locus_tag="ACJJD2_000325"
     CDS             13671..14594
                     /locus_tag="ACJJD2_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG7578938.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(14672..15313)
                     /locus_tag="ACJJD2_000326"
     CDS             complement(14672..15313)
                     /locus_tag="ACJJD2_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7578939.1"
                     /translation="MQKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGHGETQDCIAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(15368..16159)
                     /locus_tag="ACJJD2_000327"
     CDS             complement(15368..16159)
                     /locus_tag="ACJJD2_000327"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HGG7578940.1"
                     /translation="MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARSLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFHL"
     gene            16325..16400
                     /locus_tag="ACJJD2_000328"
     tRNA            16325..16400
                     /locus_tag="ACJJD2_000328"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16358..16360,aa:Thr,seq:tgt)
     gene            16435..16510
                     /locus_tag="ACJJD2_000329"
     tRNA            16435..16510
                     /locus_tag="ACJJD2_000329"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16468..16470,aa:Thr,seq:tgt)
     gene            16652..17443
                     /gene="panB"
                     /locus_tag="ACJJD2_000330"
     CDS             16652..17443
                     /gene="panB"
                     /locus_tag="ACJJD2_000330"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HGG7578941.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            17566..18402
                     /gene="panC"
                     /locus_tag="ACJJD2_000331"
     CDS             17566..18402
                     /gene="panC"
                     /locus_tag="ACJJD2_000331"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HGG7578942.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYCELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            18567..20411
                     /locus_tag="ACJJD2_000332"
     CDS             18567..20411
                     /locus_tag="ACJJD2_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7578943.1"
                     /translation="MLPNRFKMLTVLTAALIAGQVSAAGSGAGDMKQPKEVGKVLRKH
                     QRYSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLE
                     EVLAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSV
                     QGREKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTEEQRSRAALTAAMIYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGS
                     NTELQAEALVQRSVVYDRLGKRKKMISDLERAFRFAPDNAQIMNNLGYSLLSDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            20552..21133
                     /locus_tag="ACJJD2_000333"
     CDS             20552..21133
                     /locus_tag="ACJJD2_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HGG7578944.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETLERCAARTR"
     gene            21143..21988
                     /gene="ispE"
                     /locus_tag="ACJJD2_000334"
     CDS             21143..21988
                     /gene="ispE"
                     /locus_tag="ACJJD2_000334"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HGG7578945.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGKREDGYHNIESIFCLIDLQD
                     TVYLKLRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCSRTTQQLIDLGATLGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRDSAYNIYRQVSDLYEAYLAEGLSKH
                     PWLSV"
     gene            21996..22071
                     /locus_tag="ACJJD2_000335"
     tRNA            21996..22071
                     /locus_tag="ACJJD2_000335"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22029..22031,aa:Gln,seq:ttg)
     gene            22084..22159
                     /locus_tag="ACJJD2_000336"
     tRNA            22084..22159
                     /locus_tag="ACJJD2_000336"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22117..22119,aa:Gln,seq:ttg)
     gene            22168..22243
                     /locus_tag="ACJJD2_000337"
     tRNA            22168..22243
                     /locus_tag="ACJJD2_000337"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22201..22203,aa:Gln,seq:ttg)
     gene            22410..23393
                     /locus_tag="ACJJD2_000338"
     CDS             22410..23393
                     /locus_tag="ACJJD2_000338"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HGG7578946.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            23460..24032
                     /locus_tag="ACJJD2_000339"
     CDS             23460..24032
                     /locus_tag="ACJJD2_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HGG7578947.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(24449..24667)
                     /locus_tag="ACJJD2_000340"
     CDS             complement(24449..24667)
                     /locus_tag="ACJJD2_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578948.1"
                     /translation="MRAVEICGFFFAGDEGAGSGALQVEIGGGFARPIELITFARTGK
                     VFCAEDEFELFKVNLVFTKDFGKELFEF"
     gene            24671..26299
                     /locus_tag="ACJJD2_000341"
     CDS             24671..26299
                     /locus_tag="ACJJD2_000341"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - obsolete DNA methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7578949.1"
                     /translation="MFIEAENLEALKILQKSYAGSVKMIYIDPPYNTGNDSFVYPDKF
                     SESREEYARRVGDTDDAGYLKRDGVFQGAWRKNGKDSGHYHSNWLSMMLPRLHLAKTL
                     LREDGVIFISIDDNEQAQLKLLCDEVFGAENFVGQFPWRKRTAKSDVPFGVSADYEYL
                     LAYARSNAFIASIDAEERRYFETDDFPNRPWRTHDLTTQRNASERPNSFFTMVNPKTG
                     KEYPANPNATWRVTKDTFQEYYNAGKIVFPDDYDFLKIKNPVMRYFKDDDMKKDGERF
                     GRKAVSTRLPENVGMSLNGTKEITELFKSKLFDFPKPSSLIKYLLQILHVSDGLILDF
                     FSGSGTTAHAVMQLNAEDGGNRRFICVQLPEETDEKSEARKAGFDTIAEIAKERIRRA
                     GRQISDGLQDGSETDTGFKVFKLAESGFKQWRQPEQSDTEALQRELSLNIDSVLSETS
                     SENLLYELMLRMGLKLTCKVSFLDDVYFVEDEDTGGLYAFLLKRVDQGLIDAVLAKHP
                     AKVAALDRLFEGDDALKSNTVLQMKDAGVMFECV"
     gene            26534..29185
                     /locus_tag="ACJJD2_000342"
     CDS             26534..29185
                     /locus_tag="ACJJD2_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HGG7578950.1"
                     /translation="MELKFEELPYQLDAVNAVANLFAGQPNHARTFDLTSQGTGRFVG
                     NGLDLDWETLGLNLNTVQKQNGQPETEIGAHGLNFSLEMETGTGKTYVYLRTIYELNR
                     SYGWKKFVIVVPSVPIREGVLKSLEITKAHFDGVFGRPVMRYAEYSSSRLSDLRTFAV
                     NDHIEILVINIQSFEKDGNVINKVNESGETPIKFIQETCPIVIIDEPQNMETEGRLNA
                     LESLNPLFTLRYSATHKQPYHKVYSLNPVQAYNLKLVKQIEVLPVLAENDVNGAFVEL
                     LEVKQAAKGRPKADLNIHYQDKKETKKKKVSVKWEDDLFEKSGGNEAYRHGFIIDGMD
                     FDKQELAFSSGKTITRGGDGDAVRDEIMKNQIRETVREHLAKEKRLNPLGIKVLSLFF
                     IDRVENYRTEDGTAGKFALWFEEIYRELAGNTDTAGVHDGYFSQDRKGRLKNTDGTTQ
                     ADNDTYRLIMRDKETLLSFDSPLRFIFSHSALKEGWDNPNVFQICTLNETRSPLKKRQ
                     EIGRGLRIAVNQEGRRVRDENVNILTVVPNESYELFAANLQKEYEDECGIKFAAENIK
                     NGNKKKKQLFRKDFPLDPEFQAIWDKLKYKTRYRVRFDTEELIKQASEAVANLPEIQK
                     PKIRIRKAQLKQSQTYGIETVEIAGRSREMDVQWEIPDILGEIQRKTGLTRRTVYEII
                     IQSGRLKDVAGNPQRFIDLTAEAVNRSLHALMAAGIEYERTGEVYDQKLLEDMAREGI
                     EFYENGFTFTVSNPQKTICENYIPLDSGTEKAFAQNCEDYDAKNEGGVAFYFKLPGWF
                     KIPTPLGNYNPDWAVVKQVRDKVYFVAETKNTGKGIQTGVDMDKLRQNERLKIKCGKR
                     HFEALGGLAYRVVEKVGDLKSEKEEQA"
     gene            complement(29347..30516)
                     /locus_tag="ACJJD2_000343"
     CDS             complement(29347..30516)
                     /locus_tag="ACJJD2_000343"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HGG7578951.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLVGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKTTEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTLAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            30664..32190
                     /gene="ilvA"
                     /locus_tag="ACJJD2_000344"
     CDS             30664..32190
                     /gene="ilvA"
                     /locus_tag="ACJJD2_000344"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HGG7578952.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(32247..33320)
                     /locus_tag="ACJJD2_000345"
     CDS             complement(32247..33320)
                     /locus_tag="ACJJD2_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HGG7578953.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(33317..34177)
                     /gene="cysW"
                     /locus_tag="ACJJD2_000346"
     CDS             complement(33317..34177)
                     /gene="cysW"
                     /locus_tag="ACJJD2_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HGG7578954.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGRLEAQGIQIIFAIPGIVLATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(34429..35265)
                     /gene="cysT"
                     /locus_tag="ACJJD2_000347"
     CDS             complement(34429..35265)
                     /gene="cysT"
                     /locus_tag="ACJJD2_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HGG7578955.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMLWALGRRSGA
                     KG"
     gene            35404..35511
                     /locus_tag="ACJJD2_000348"
                     /pseudo
     CDS             35404..35511
                     /locus_tag="ACJJD2_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            35556..35888
                     /locus_tag="ACJJD2_000349"
     CDS             35556..35888
                     /locus_tag="ACJJD2_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578956.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GEACACGH"
     gene            36219..36728
                     /locus_tag="ACJJD2_000350"
     CDS             36219..36728
                     /locus_tag="ACJJD2_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HGG7578957.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT         9155 a         8582 c         9672 g         9338 t
ORIGIN      
        1 cggtattttc ttaccgtatt ctgcgattgc ctgtcggaaa atgccgatca acctgcctat
       61 aacggcattt tcgccaaatt cgttcagaca gttttcccta agtcgggcag gttcaaaatc
      121 agagtggtgt tcatacattt tgatgagtgc gtcggcaagg gcatcgtcgt cgtcaacagg
      181 aaccaaatat ccgttgccgt ctgaaacaat agattccgca ccgccgcagc gtgttgcaat
      241 gacgggcaat ccttgggaca gtgcttcgat atagaccacg ccgaaggttt cggtgcggct
      301 ggcaaggacg aatgcgtcgc tgttcctcat caaatccaag actgcttcgg gctgcaatgc
      361 gcccaaaaat gtaacggcat gggtaatgcc caagtctgcc gcctgctgtt tcagccgctg
      421 ttcttcctgt ccgctgccgc cgatgtttag acgcagttgc gggcattgtg ccaacgcccg
      481 ggcaaaggca gtgagcagga catcgtgtcc tttgagacgg cgaaggtgcg agacggtgca
      541 gaacacgaaa tgcggtttgt tgtttttttc tctttgttca aacggtcggt tgaatattcc
      601 gcccagtatg ttggggaggt actgccattc gcagccgtat ttgtgttgca ggacgtgtgc
      661 gaaatggcgg ctgatggcga gacgtgcggc ggcgtgcgcc gccgcatttt tcataggctg
      721 ccattggtgg ggacggatca gaccgcgcgt gatggtgctg ctgtgtttcg tgacgacata
      781 ggggatgccg tatttttggg aaatcttgaa ggcaagtatg ccggcatagt tcatacagtg
      841 ggcgtgaatc aggtcgggca gcccgttttc gcggatgtag tgtttgaaag ctttcaaacc
      901 cgcacacacc cagcggatgc agtcgatgtc gatgaacgga aagcggggga agaaatatat
      961 gccgtgccat gcatagatgt ccaaaccgct ttgccgatat tttgcaaaac cgtaaggccg
     1021 gtcaggatgc ttgctgtttc tttccgcaag tagcggaaca tcggtgcaag cacggcggtt
     1081 ttgatgcctt tcctctgcaa tgccagtgcc tgattttgaa aaaaatcccg tccacatcct
     1141 gttcggattg cggataccat gaggggatga cgaggacgtg caacggttcg gacataatat
     1201 gattccgtat cggaaagacg gttattataa gacagacgca gaccgaatat ttaaattgtt
     1261 gccttacgct aatgcaattt agcgcgccga tatgctagat tggcggtttt atgagtgagg
     1321 atacggatat gttgcgttct attttggcgg cttccctatt ggcggtatct tttccggcag
     1381 cggctgaagc attgaattac aatattgtcg aattttccga atcggcgggt gtcgaggtgg
     1441 ctcaggatac aatgtccgca cgtttccaag tggcggcgga aggacgggac aaaaatgccg
     1501 tcaatgccga gtttgttaaa aaattcaaca gttttaacag aaaattgaaa aacggcagct
     1561 ttaaaaccga attggtatcg cgcagtgcga tgccgcgcta tcaatatacc aacggcagac
     1621 gcattcaaac aggctgggag gagcgtgcgg aatttaaggt cgaaggtagg gattttgatg
     1681 cgttgaaccg ttttattgct gatgttcaga cggatgcttc gcttgaatat accgatttca
     1741 gcgtgtcgcg tgaacgccga aacgaggtca tcgatcaggt cagcaaggat gctattttgc
     1801 gttttaagac gcgtgccgaa aaactggcgg gcattttggg tgcgtccggt tataaaatcg
     1861 tcaaattaaa tttgggacac atcggcagcc atatcgcggg agggggagct gctcaggcaa
     1921 aaatgcttcg tgccatgccg atggcggcaa gcgtcaatat ggagggtgcg gattctgccg
     1981 cgcagggtgt ggaggaaatc agcatcagcg tcaatgggac ggttcagttc taaccacgga
     2041 taaacaggta gatgccgtct gaaaccggat gatacggttc agacggcatt tatatttcag
     2101 gctttaggca gggtaacgcc ggtttgcccc atatatttgc cgttgcggtc tttgtatgag
     2161 gttttgcaga tttcgtcgct ctcgaagaag aggacttgcg ccacgccttc gccggcgtag
     2221 attttggcgg gcaggggggt ggtgttggaa aactcgaggg taacgtagcc ttcccattcc
     2281 ggctcgaacg gggtaacgtt gacgatgatg ccgcagcggg cgtaggtgga tttgcccaag
     2341 cagacggtca ggacgttgcg cgggatgcgg aaatattcga ccgtgcgcgc cagtgcgaag
     2401 gaattgggcg ggatgatgca gcagtcgtct tcaacggtaa cgaagttttt cgggtcgaag
     2461 tttttgggat cgacgatggt gctgttgatg ttggtgaaga ttttaaattc gtttgcgcag
     2521 cggatgtcgt agccgtagct ggacgtaccg taggagatga tgcgtttgcc gtcggcttct
     2581 ttgatttggt tcggctcgaa agggtcgatc atgccgaatt cttcgctcat tcggcgtatc
     2641 catttgtcgg acttgatgct cataatgttt tccttgtttc ttgcggtgtt cggacaaagc
     2701 attcgggaat gccgtctgaa aacggggctt atttgttttt gggcagtttc acttcttgaa
     2761 tcatgccgtt ttcacatttc ataatgaaga gggtttcgcc gttttgcgag acggtaaacc
     2821 tgccgtgtgc caggcctttt ttgaacgtgc ccgagagtac catgttgcgg aatttggtac
     2881 tgtcggaatt gaacggttcg ataaatattt cgcggttggc ggaaacggta taaacgcctt
     2941 gtccgtcgaa tttgccattt ttaaacgaac cggtataacc gcgcccgtcc cggcaacgcc
     3001 atatgccttt gcctgaagga agcccgtctt ttccgactcc gccgtcgtag gtgcagccgg
     3061 gttcttgata ggaagtcaga acggcggccg aagtggggag ggcgaacatc atggcgggca
     3121 gtaggaatgc gagatgttta agcataaggg ttattccatt ggattttggt tgacggtatt
     3181 ttgtcgtgaa aaagccgtct gaaaaatcaa tcttgccagc cgcccaaata ggaaaccagt
     3241 tcttccaaca tggtgctgac ggattccgcc atcagaattt gcgaggcgaa ggcaaggccg
     3301 gcggcatcgt cgccgttgct ttcggcttct tcctgcaata cgtcgaggta ttggatgcgc
     3361 ttgagtgtga agtcttgagt gaggataaag gcaatttgtt cgcgccacac caagcccagt
     3421 tgggtaacgg ttttaccgtt tttgacgtgt tgaaccactt cgtcggcggt taaatcttgt
     3481 ttggatactt tgacgacggg aacaatatcg cccgtacctt tgagttcgca atcgctgtct
     3541 aattcaaaac cgccttcgca atgcccttgc aacagccagc cggtcatcaa ggaagagggc
     3601 gattgcttgg tattcggcag cgaggcttcc aaaccgccca aagcttcgcg cagcttggtc
     3661 aggatgtttt ctgctttggc ggaagccgcg ttattgacga gcaggtagcc gtggcgggtg
     3721 ttaaacaccg cttctgtacg gctgctgcgg gtaaacgctc ggggcagcag gtcgtctgta
     3781 atttgctctt taagctcttg tttttcttta cggccgacat tgcgggcttc attgttttgg
     3841 atttccgcta ccttctcttc caaaatatcg cggatgacgc cggcaggcag gactttttct
     3901 tcttttttca gggcgacgcg caaggtaaag tcggcaggga aaacgagttc gggagagaac
     3961 gaaaccggtg cggcaaagcc ttcgctgaac cagtctaagc cttggcaatg ggtaaattca
     4021 gcttcagcaa gtttgtcggc aagtacgtct gcctcaggca gcttttcttt gttgagcgga
     4081 taaaaactaa tctgcttgaa ccacataatg tttcctgttg tttgaaatgt cgggaattat
     4141 ttgctgaatt gttttttcac actgactttg gttttcttct tgaagcggtt tttctcttct
     4201 ttgcggtctt cgcgtttctc aatacggttg ctcaggctga cacggcgcag cggttttttc
     4261 ttcggtttgt cttccgcatt ttcatagggg ttttctgaaa cattgtattg aattctgagc
     4321 ggcgtgcctt gcagattgaa ggctttgcgg aatgtttggg tcaggtagcg cgtatagctg
     4381 tcggaaatcg cgtgcagcga attgccgtgt accacaatta cgggagggtt catgccgcct
     4441 tggtgggcat aacgcatttt cggacgcacc aagccggcac gcggcggttg ctgacgctcg
     4501 attgcgcttt gcaggacgcg cgtgattttc ggcgtcggca tcttaatcat cgccgcgttg
     4561 taggcagcct gaatgctgtc aaacaaaccg tctataccgc gctctttcaa tgcggaaata
     4621 aagtggaact tggcaaaatc gaggaaatac agtttgcggt tgatatcgcg tttcacttgc
     4681 tcgcgacgtt cttcgctgat gccgtcccat ttattgaccg ccaccaccaa agcacggcct
     4741 gcctccaaag cgaaacctgc aatcgtcgca tcttggtcgg cgatgtcctg ctgcgcgtcc
     4801 aataccaaaa cagcgacgtt tgccgcttca accgcctgca tcgctttgat aacggagaat
     4861 ttttccactg cttcatccac tttgccgcga cggcgcacac ctgcggtatc gatgatggta
     4921 aacggtttgc cttcgcgctc gaaatcgata tggatactgt cgcgcgtcgt gccggccata
     4981 tcgaaggcaa tcacgcgctc ttcgccgaga atggcgttta ccagcgtgga tttgccgacg
     5041 ttcggacgac cgatgacggc aaaaacggga tgttttgcat cggcttcttc gacttccggc
     5101 tcggggaagt tttctaaaat ttcttcaatc aggtaataca cgccgtcgcc gtgcgcaccg
     5161 gaaataacat aagggtcgcc caaagcaagt tcgtagaact cggcggcaag cacggccctg
     5221 ttgccgcctt cgcctttgtt taccgccaga taaacagggc gcgggctttg gcgcaaacgg
     5281 tcggcaatga ttttgtcttg cggggtcaga ccggtgcggc cgtccaccaa aaatacgacg
     5341 gcatcggctt catcgacagc ctgcaaggtt tgttttgcca tttcgtgcaa aatgccgctg
     5401 tccacaaccg gctcgaaacc tccggtatcg atgaccaaat aaggtttgct gccgactttg
     5461 ccgtgtccgt aatggcggtc gcgcgtcaga ccgggcaggt cgtgtacgag cgcgtctttg
     5521 gtgcgcgtca aacggttgaa taaagtagat ttgccgacgt tggggcggcc gacaagcgcg
     5581 atggttggtt tcatgattgg gtctttctgt gtcaagtgcc gttcgggaga actgaacaca
     5641 agcaggtgtc cgttgggaca cggcagatgg ttttacggga attgccgtag gatagtgttg
     5701 tctgaaatgc cgtctgaaga gagggtggca tttcagacgg catttatttc agcgaatcga
     5761 gtttcatttg aaccaattca cgaccgacag aatcttgagg cattttttct aaagcctgac
     5821 cgtagttttt taaggcttcc tggctttttc cctgtgcggc atagacatcg cctttggttt
     5881 ccatcagcag gggggagaag tccgcttcaa ccggcgtgtc gagcgcggca agcgcggcat
     5941 cgtatttttt ttgttgcaac aacacaacgc ccagacgctg cgccgccaac gcttgaatca
     6001 ggctgtcttt ttggttggac aacacccatt tcaaatggcc ttcggcaaca tcgtaacgct
     6061 gcgcgtcaaa ttcggttgcc gccgccatca gcgtggcttg ggcggcggaa atagaatgcg
     6121 ggtagctttg ttggagtttg gtcaattcgg cattaatttc gctttgcggg gctttgtttt
     6181 gcgccttttc cacgatgttt gccagcaccg ccgccgcttc ctgattttgg gaagccgcac
     6241 ggttttggta aaccgtgtat cccaagtagc cgagtgctgc caaaatcagc agggcaaaca
     6301 gccatttgcc cgtggttttc caaaaatatt taaagttgtc taactcttgt tgttcttcga
     6361 gatgggctgc catttatgcg ttcttccatt gttgtaaagt atgggttaaa tcctcggcgg
     6421 cgacagtttg ctgaccgtgt gcgccgttca tgtctttgag cgtaaccgta ccgttcgcca
     6481 gttcgtcttg cgcgacaatc agggcaaagc gcgcgccgct gttgtcggct tttttcattt
     6541 gcgctttcag gctttgatag ccggaatgct gcattacatt gaaaccttgc gcgcgcaagg
     6601 cttgcgcgta tttcatcacc tgcaagtccg ccctttcgcc ttggtgcatt gcatagacat
     6661 caggcgcagc gttcacttcc agcgagccgt attcgctcac caaaagcagc agccgttcga
     6721 tgcccatcgc aaagccgatg gacggcgcag gtttgccgcc aagttcctca atcaaaccat
     6781 cgtaacggcc gccgccgcac acagttgcct gcgcgccgag tttgtcggtc gtccactcaa
     6841 aaaccgtctg attgtaataa tccaaaccgc gaaccaagcg cggattttca atatattgaa
     6901 tacccaaacc atccaacatc gccttgaagc gtgcatagtg gttttgcgaa gcctcgccca
     6961 agtaatccac caaacgcggc gcggcgttgc agatttcctg caaatcaggg tttttcgtat
     7021 ctaaaacgcg caaaggattg gttttcagac ggcgtttgct gtcttcatcc aatttatctt
     7081 cataacgggt cagatattca accaatgccg cacggtgtgc cgcgcgttcc tcacggttgc
     7141 ccaagctgtt gatttccaaa gtcaggtatt cgcgaatacc caatttttcc cacaagtcgg
     7201 cagacatcgc gatgatttcc gcatcaatat ccggaccttc aaaacccaaa gcttcgatac
     7261 cgacctgatg gaactgacga taacggcctt tttgcggacg ctcgcggcgg aacatcggcc
     7321 ccatatacca cagcttttgc gggctgttgt agagaaggtt gtgttcgacc accgcacgca
     7381 gacaagaagc cgtaccttca ggacgcaggc tcaaactcaa agaatcgttt gaatcggaaa
     7441 aggtgtacat ttccttgccg accacatcgg tttcttcgcc gatggagcgg acaaacaaac
     7501 cggtttgctc gacaatcggc gtacggattt gctggtagcc gtaagcgcgc gtccaacggt
     7561 ttaccgtatc ttcaaacacc tgccaaaacg cagccgtcag tttgaaatct ttttgttcga
     7621 caggtaaaag gtcgttcata ccttttacag attgaatttt ttgtgccatt tcaatatggg
     7681 ataagcgaaa atcaaatagt tgggcattat agctgatttt taagggcttg tgaggataga
     7741 gatggtttgc ggacgggtaa aaatgccgtc tgaaacagtt ttcagacggc atttgactta
     7801 ctctgcacgt gcttgcctga tttgtccgac tgcaaactct gtctgccgct tgggatgatg
     7861 tgtgaaaaac aatttatttg aaattgtctc ggcttttttc ggcacgaccg ccaaaatctt
     7921 acctgccaaa tttccctcac gggtttgcca agcatccaaa aactgcgccc tgctcattga
     7981 aacatgcccc agcgacgggt cggcaagcaa aaccgtattg ccgtctatcc cgcgcaatac
     8041 cgagaaatga tcatccttgc ggtatttcag atacacgatg acggggattt tcaactgtgc
     8101 gagctgctcg aaagacaggg catagccttt cgcttcaaaa cccaaatctg gcataatgcg
     8161 ccgcatatcc tcaaacgacg cgcgcatctg ctccttatcc agctttttca acacttcttc
     8221 ttccgtcagc gtttgcccgt aaaaattgtt caaaagcgtc gccaccgaag ccgccccaca
     8281 ggaaaaatcc aaatcctgct ttacaatatt gaaatcccgc cgcgctttcc aactctgcac
     8341 tttgattttt ccgtaaacaa caggattatc gttaaacatc ggtgcagcat tcaaacgata
     8401 agataaagaa acgacaacac acgccaacag aaaaacatat ttgaacttca tcatattgtc
     8461 cacataaagg gcagcctgaa aatctttcag gctgcccttg tcaaattatt cctagctttc
     8521 ggcttttttg gcaaaccaaa caatccgatt acccgcataa tactttccat ttattgaaat
     8581 ccaacaagcc gcgtccaaaa aatgccatgc actgccgatt tccgcagcaa tctttgtacc
     8641 gttttcttca aattccaaat attcacccaa taataaactt gaaacagaac gcgtgggcag
     8701 caagtgccca ccctacgcct attcaaataa tttgattaaa taaagaataa agaaaatgca
     8761 tcaggaacaa aattataatc tgccacctga ctcacaccgc ttttaaagta aggggcatca
     8821 aaatcaaaac cgcaaaaaaa ataatttttg cattgatttt taatagattt aaaattcgaa
     8881 tatagtgttt ctccagattt aaaaagttta tctttatcta tatatttgat gctttcccta
     8941 tccaaaataa atatttcaaa cattaaaaaa tcattacatg accaagccaa atcataaatt
     9001 tgattcaaat gggtatcata aagataaaaa taataaggtt tgggaacagg taaaatattt
     9061 aatggaaaag gaggactaat tttcttaata tctgatgact gatatccata tctttctata
     9121 ttcttaaaaa tttcatcttt cttaagataa caagacattc tgacaatcac aacctgttca
     9181 tcggatatat tatctatttg catggcgcgt ataacacgcc atgcctgatt aaaattagtc
     9241 tcccttacct tagaatctat tatctttttc aaagatgaaa atgcccctta tcttgaactc
     9301 tccagttaga acctggaagt ttcgtacctc ttaaatgtgt attaatattt cttatagttt
     9361 cattaaaatg ccacgcgctg ccgatttcaa cggtaatttt cgtaccgctt tcttcaaatt
     9421 ccaggtattc ccccattagc taacgcaaag aagcagacgc catttcggct tcgttatgat
     9481 aaacccgcct tccgttgata tagacttccg cccctgtccg ctccaaattc caaaaattcc
     9541 gtactgaaat ttccatatcc cgatattgtg cagaccatgt tttttcgaag gttttcataa
     9601 aatttcctat acctgtccaa tcggcacata tcaattgcat tattatagtg gattaacaaa
     9661 aatcaggaca aggcaacgaa gccgcagaca gtacaaatag tacagaaccg attcacttgg
     9721 tgtttcagca ccttagagaa tcgttctctt tgagctaagg tgaggcaacg ccgtactggt
     9781 ttaaatttaa tccgctatac atctcaatac gataaatatt ccttaagtca aaatgcaagc
     9841 ctgaccgtac cttaactgtc aaaattttat tattttttat tgattttaaa acaatttctg
     9901 caaaattctc ttcgctttct ctctttttta gaagcacata agaaaaaata aaacttcccc
     9961 gattaaattc ataaatatgt ttcaaccatt cgcctcctct ttctgtaaga caagattcag
    10021 tttcattctt ccttattgta taaatatttc cttcacaaaa tctgaaataa atccataaat
    10081 ccatcttatc cataattaaa gaaaaagttt cacctcgaga ttttgtcaac aattcgcaag
    10141 gttgcgatgt tgcaatcaaa tagccgaaag acatttttta cctcatacat ggtcgaaatc
    10201 agtttctgtt agttcagaat ccattttttc gtcaacaact gaatccgcat ttttgaatta
    10261 acgttttcat cagctgccgt ttatctaaac cggcaggttc agtttcaaaa taagccttat
    10321 atgaagactg taagcatttc agaaaaagat catcagaaga catatctgcc gaatcaaata
    10381 caactgtttt gattttggta cttacccaaa accctttttg ctctttttct actatacgga
    10441 aattcagaat atttccaacc gaatcaaaag cacggtaaac atcatccatc aaatcctgcg
    10501 gctctatttt cttttccaat tccgacaatc cttgaaatat atccaaagac acatcttcaa
    10561 atagaaaaaa aggaggagtt agaagcggtt tttccatgat ctgtccgtag attttgattc
    10621 ccaagggcga tgacgaccaa ttccctgtcc aggcaaagtc ttgcccgtat tatccgtaac
    10681 tcgacgatga taatggggaa attttccaat aggatgacct gttctattac cgaaaggggc
    10741 tatccgcata ttattgccga ttttaatctc acgtccatat ttagcaaagg aaacaacctt
    10801 tcctgcggcg cctacaccac caggaattgc gcctaatccg ccagcaatag caacatctct
    10861 aacagaagct ggtctgcctg tcgttgcata actaaaacca tgctgtgtcc acataccaat
    10921 ggcagcacca cccaagatag ccaatggaag aaacgccccc tctgtctcct tcatctcctt
    10981 ttgagaaagc tccgccaact gcatcggtgc atctgcccgc gtgtggaaca cttggtcttc
    11041 aaatgcctga ttgtccaagc cgtttgccat tgcgggggca atcatagaca gcatcattac
    11101 ggctgcggtg atttgttttt tcataataac tcctttggat tacaaggttg gaaaatcaaa
    11161 gccctgctta gaacgtatgt tgcacaccca atttcaatag gtaaatcaga ttgcaaatcc
    11221 agcaatttga atattgtcat tgttccgtgc aaaagggatt tttattgatg agttgtgtac
    11281 tgggtttcag cttggctttt tagataatct tttcacaaga acatacatca atactgtcca
    11341 aaaaaaaaag atttgataaa tatattgcaa catattttat tccacctcca tccgaaacag
    11401 aaaccaatat atttttaatt aatacatagc tgattattac atttattatt cctataatat
    11461 ataaggatct tgccaaaatt ttttttgatt ttattttagg aatatctctt atccatgcta
    11521 aaatacagcc caatgtcgaa aagaaaataa cagcaaacac taccttacct cctctcactt
    11581 ccaaccaaac cgatagcagg tttggttgga agttggttta tttattattt aacggcgaat
    11641 gtcagtgttc ttacccgtag aacctgcata accatttatg ccaccagcaa cagtccccac
    11701 tgctacacct cgcataccat taatcagaat tcttcctatt ttttcgaatc cactatttct
    11761 tccaaagatg cagcaaacgc aggttgagcc tagacccaat ctacgtttgc tgccgcatct
    11821 gatccctatt gtttcttatc cttacatctt cctgccttgt caatcaaata aagacagaag
    11881 actatacaaa aactgaccga catactgaaa atacctatcc ccttccatgc aatctccgca
    11941 ccattgaccc aatagattag actgagaaac aacaaagcca cagtataaat caacgtaaaa
    12001 aatattgcgt aaagcacaat aaagggaact tttatctcac ggttgttttt tataatatat
    12061 tcagcaactt gatttccgaa tatacctgat aaaaaatata gtattagatc atccatttcg
    12121 tttatcttct atgttttccc attgcggcgc tagaagactg atttaatgct gcaccatttg
    12181 cacgaataac tgcattagga atagcatttc cccctttcca agcagaacgg gcaaaaacac
    12241 tagtagtaat ccctgcaccg cgcaacatcg cactgctata tccgccgcct atcataccac
    12301 cagcggttgc agccaaggta cttcttgttg aagcaaattg ccctgtttta attttagaaa
    12361 tgccgtgatt agcccaagca ctaattgccc ctcccatcaa agcacctgcc acaataggaa
    12421 gaaacgcccc ctcagtctcc ttcatctcct tttgagaaag ctccgccaac tgcatcggcg
    12481 catctgcctg cgtgtggaac acttggtttt caaatgtctg attgtccaag ccgtttgcca
    12541 ttgcgggggc aatcatagac agcatcatta cggctgcggt gatttgtttt ttcataacaa
    12601 ctcctttgga ttacaaggtt ggaaaatcaa aacctgctta aaatgtatgc tgtacgccca
    12661 atttcagttc ggaactgctt tgccctgaaa cgttgaaacg tgcggatgcg tttaaagccg
    12721 tggttttggt gaaaccgaaa cctgcgccga aatgggcgta ggtggatgtg tttcttgcgg
    12781 attctttttt gccgtctatg cggtcgggct gtttgcccag ccattggatg cctccggtca
    12841 ggctgattct gtcgttggcg gcaaatgaga tgttggggtt gagcagcagg tagttgcccg
    12901 atttgtagcg gatgccgtct gaaagggttt tgctgccgtt gatgcggtag gcggcggtga
    12961 gggaaaggac aatcggatct atggctttgt aggtggtggc gccgatgagc cacgattttc
    13021 ccgacgaggc tttgttgcgc gatttttcgt aaaccgtgct ttcaagaaag ctgattaggg
    13081 cggggttttt gtcgtcttta aggaaggtgt ggctgatgcc gagggatacg tcggacatcc
    13141 gtttgttgcg ggttttgctg ttgccgtcga gtttgcgttc ttcgtgccac agatagctgc
    13201 cgctgccgta aatgtcggta ttcccggtca gtccgtagcg caaaccgagc gtgccaacga
    13261 gcatatcggt attgctgccg ttttcttgga tttcggtcgg aatggggata aacgaggttg
    13321 cgccggtttg gatgtaaacc agtgcggcaa gttcggcgcg gttgttttcg ctattcaggt
    13381 aggtaaggga agtttccagt ttccatttgc ccttgtcagt cattatgtct tcaatcgtca
    13441 agggcaggtc ggcataagcg gataaaggca ggatggcggg caaggcgggc aaaaagatgc
    13501 gcttcatatt tctcctattg atattaattc ttatttaaga atagtaatga atatccgata
    13561 attttgtcta aataaatttt taaatcaaaa aaaacgatat atttgttttt atcaattatg
    13621 ttttgatatg ccgtctgaaa agtttgtgaa aaacggttac aatccgccgc atgaaaaaac
    13681 gcaataatcc tcttccgttg ttgaacggtg tcaaacccag ttatttggtg ctgccgcatg
    13741 aaaagcagtt ttacgggctg ccgctgctgc attttctgtg catccgcttt ccttttgtgg
    13801 gcgcggacga ttggcgcagg cggttgaaca gcggttttgt ggtcggttcg gatggtgcgg
    13861 cgttggacga acatactttg ttcgagccgg gtaaggtgat gttttattat cgggaaacca
    13921 gcagtgagga tgagccgcgt attccgtttg aagaaaagat tttgcatatt gatgagcatt
    13981 tgattgtggt ggacaagccg cattttctgc ccgtcatccc cagcgggcgt tttttaaggg
    14041 aaacgctgct cacacgtctg cgcctgcgtc ccgaattgca gcatttgaat gttgaagaca
    14101 ttacgccgct gcaccgcttg gacaaggata cggcaggcgt gatgctgctg tcgcataatc
    14161 ctgccacgcg cggagcctat cagacgatgt ttcaaaacaa aacggtatgg aaaacgtatg
    14221 aggcgcttgc gccgacaagg acggatttgc cgtatccgct cgatgtggtt tcgcgtttgg
    14281 tgaggggtga gaaatttttt acgacgcaag aggcggaagg cgaaccaaac gcacatacga
    14341 cggtcgaact gattgaaaac aggggggaat tcagccttta ccgccttacg ccgcatacgg
    14401 gcaagaaaca ccagttgcgc gtgcatatga tgggtttggg tatgccgctg ttgaatgacg
    14461 cgctctatcc cgtgccgtct gaagcgggca gcgaggatta tcggaaacct ttgaagctat
    14521 tggcaaaaaa gattgcgttt gcagatcctt tgtcgggtcg ggaaagggtg ttttgcagcg
    14581 gattttgcct ataatgagag ggaacgcaaa cccgtatcgg cggatgccgc cgatacgggt
    14641 tttacattat cgatgccgtc tgaaaggggt tttatccgtt caggcatacg ggcgcgaagc
    14701 ggaggatggt gtcgcgcagg acgatgagtt tgccgtgaaa gaaatgcgtg gaaccggcga
    14761 tggtaatgac gggcaaatct tgcggttccg cccatttcag tgctttcccg atttcgacga
    14821 cttcgtcttc cgcgccgtgt atcatcagcg ttttggcaac attgggaacg gcggacggct
    14881 cggggcggcc ggtatagtgg cagactgccg cgccgatgag cagcaataaa tcgggtatgc
    14941 gcgcttgtgc ggcaaatgtg gcgacataac cgccgaagga gaagccggat aaggcaaatt
    15001 cgggggcttc gggatgttgg gcacgagcat agtcgatgac ggcgatacag tcttgcgttt
    15061 caccgtgtcc gtaatcgtgt gtgccttcgc tgccgcctac gccgcgaagg ttgggcaggt
    15121 agcagtggaa gccgagtttg cttaaggctt tggcggcggt ttggatgact ttgttggtgt
    15181 tcgtcccgcc ttggaggggg ttggggtggt tgatgacggc aacaccgcgt gccggtactt
    15241 gttcggacgg gatatggatg gtttctaaaa tgccggcagg gccgggtatg tgtatggttt
    15301 caggtttttg cataatggtt tcctcttgat tttccgcata ttccgatgca gccgcgaaga
    15361 tggcggctta aaggtggaaa tgcttgccgt tgttggggtt ggatgctttc aggtcggcga
    15421 gcatgcggtg gaagtccaat ccgtaagcgt tgctcagttt gtcggcacgt tttttgagtt
    15481 tgtctatgtt ttgctctttg gggctgcttt ggaaggccat taccgcgaca ttgccgtggc
    15541 tttcggcagg aagttccaag acgcgccctt caaaaacgct caacaaccgt tcgatgaagc
    15601 gttggtagcg tttgtcgccg ctccaccagt tggttacgaa tatgccgtct gaagagagtg
    15661 cgtttcggca gtctcggaaa aacggttctt caaccagcgc atcgatgatt tgttcgccgt
    15721 cgaacccgtc caccaaaatc acatcggtgt tgtggcggaa gactttgata tattctgcac
    15781 cgtctgcttc gataatttca aatttctcgc cctcgaaagg caactcgaac aggctgcggg
    15841 caatggcgat gacctgcggg ttgatgtcca cggcggtttg gcgcgtgtcg ggcaggtagg
    15901 tgtctatcca gcgtgcaaac gaaccgccgc ccaagccgat ttgggtgata tgctgcggaa
    15961 gagcgtcggt aaacagcagc catcccatca tggcacggct gtaagagagt accagctcgg
    16021 acgggtggtc gaggttcatt gagctttgga tggtgtcgct gcccaagtga agcgaacgga
    16081 tattgccttc ttcggaaatg ccgacttcgg gaaagctgga ttttgcagga cgcaggcggc
    16141 ggtagggatg tcttgccatc ggtgtgaacg gtcggtttga aaggcagata ttttatcaga
    16201 atgccgatgg ttgtcctgct tcaaattaat ttcttttcaa ataaattact tattcggatt
    16261 tgccggggct ttcggataaa ttccttgcca aggtgcggca ttgcctgcat aattcgcttt
    16321 ctttgccggt atagctcagt tggtagagca cctgacttgt aatcaggggg tcccgagttc
    16381 gactcttggt gccggcacca tttctgctga tggtgttgca aaacatttca gtaagccggt
    16441 atagctcagt tggtagagca cctgacttgt aatcaggggg tcccgagttc gactcttggt
    16501 gccggcacca gatttgacag tccgattgtg taaaacagtc gggctgtttt gcatttgcgg
    16561 cacggtcggt ggcagggctg cgggcatttc actataatag cccgtttcaa actgaaaagg
    16621 ccgtctgaaa agggcggggt aacaatatct gatgattact gtgaacacac tgcaaaaaat
    16681 gaaggcggcg ggcgaaaaaa tcgctatgct gaccgcttac gaatccagtt ttgccgcgct
    16741 gatggacgat gccggcgtgg aaatgctgct ggtcggcgat tctttgggga tggcggttca
    16801 ggggcggaaa tcgacgctgc ccgtcagcct gcgcgatatg tgttatcaca ccgaatgtgt
    16861 agcacgcggt gcaaaaaatg cgatgattgt cagcgatttg ccgtttggtg catatcagca
    16921 gagtaaggag caggcgtttg ccgccgctgc cgaactgatg gctgccggcg cgcatatggt
    16981 taaactcgaa ggcggcgtgt ggatggcgga aacgactgaa tttttgcaaa tgcgcggtat
    17041 tccggtttgt gcgcacatcg gtctgacccc gcaatccgtg tttgctttcg gcggatataa
    17101 agttcagggg cgcggcggca aggcgcaggc gttgcttaac gatgccaagg cgcatgacga
    17161 tgcgggggcg gcggtcgtgc tgatggagtg cgtactggcg gaactggcaa aaaaggtaac
    17221 tgaaactgtt tcctgtccga ctatcggtat cggtgcgggt gtggattgcg acgggcaggt
    17281 tttggtgatg cacgatatgc tcggcatttt cccgggtaag acggcgaaat tcgtcaaaaa
    17341 ctttatgcag gggcatgata gtgttcaagc ggcggttcgg gcgtatgttg ccgaagtcaa
    17401 agccaaaacc ttccctgctg cggaacatat ttttgcagat tgaacggttt acatgcagca
    17461 tgccgtctga aagccgtttc agacggcatt ttgttttgcc gtgcgcggcg cgtataatcg
    17521 gcgcgttttg tcgggcagga agcccgaaag ataaggatta ccgttatgca aatcatacat
    17581 accattcgag aactgcgcgc gtggcgtaaa aatgcgggaa aggtggcatt tgtgccgacc
    17641 atgggcaatc tgcatgaagg gcatcttgcg cttgtgcgtg aggcgaaaaa acgcgcggac
    17701 agtgtcgtgg tcagcatttt cgtcaaccgc ctgcaattcg gtcagggcga ggatttcgac
    17761 aaatatccgc gtactttgca acaggatgcg gacaagctgg aagccgaggg tgttgccgtt
    17821 gttttcgcgc ccgatgagaa agaactctat ccgaacgtgg aacagcgtta caacgtcgaa
    17881 ccgcccaatc tgcaaaatga gttgtgcggc aagtttcgtc cgggacattt ccgcggggtg
    17941 gcgacggtgg tgtccaagct gttcaatatt gtcgcgccgg atgttgcctg tttcggcaaa
    18001 aaagactatc agcagcttgc cgtgattaaa ggtttgaccg aggatttgaa ttttgatgtt
    18061 gaaatagtgc ctgtcgatac ggggcgcgcg gaagacggtt tggcactctc cagccgcaac
    18121 cagtatttga gtgcggcgga acgcgacgaa gcaccgcgcc tgtactgcga attaaaggct
    18181 gttgccgaat ccttggcgca gggcagtttg gattatgcag gtttggagcg gcaggctgcc
    18241 gaccatttga ccgctgcggg ctgggtggtc gattatgtcg aaatccgccg cgccgatacg
    18301 ctcgaagtgg cgcgggcggg agataagaaa ctggtggtct tggccgccgc ccgtctgggg
    18361 acgacgcgcc tgattgacaa tttggaaata aaactccctt aaaccgcaag cgtcgggaat
    18421 gccgtctgaa gcggatttgc gtttcagaca gcatttattt ttttgaacgg ggtttcgcaa
    18481 atctacaaac gattctgctt gtgataaagt tacgcctgat tatatgccgt ctgaaagttc
    18541 ggacggatgt cggataaagg atgattatgc tacctaaccg tttcaaaatg ttaactgtgt
    18601 tgacggcagc cttgattgcc ggacaggtat ctgccgccgg aagcggtgcg ggggatatga
    18661 aacagccgaa ggaagtcgga aaggttttaa ggaaacatca gcgttacagc gaggaagaaa
    18721 tcaaaaacga acgcgcacgg cttgcggcag tgggcgaacg ggttaatcag atatttacgt
    18781 tgctgggagg ggaaaccgcc ttgcaaaagg ggcaggcggg aacggctctg gcaacctata
    18841 tgctgatgtt ggaacgcaca aaatcccccg aagtcgccga acgcgccttg gaaatggccg
    18901 tgtcgctgaa cgcgtttgaa caggctgaga tgatttatca gaaatggcgg cagattgagc
    18961 ctataccggg taaggcgcaa aaacgggcgg ggtggctgcg gaacgtgctg agggaaagag
    19021 gaaatcagca tctggacgga ctggaagaag tgctggctca ggcggacgaa ggacagaacc
    19081 gcagggtgtt tttattgttg gcacaagccg ccgtgcaaca ggacgggttg gcgcaaaaag
    19141 catcgaaagc ggttcgccgc gcggcgttga aatatgaaca tctgcccgaa gcggcggttg
    19201 ccgatgtggt gttcagcgta caggggcgtg aaaaggaaaa ggcaatcgga gctttgcagc
    19261 gtttggcgaa gctcgatacg gaaatattgc cccccacttt aatgacgttg cgtctgactg
    19321 cacgcaaata tcccgaaata ctcgacggct tttttgagca gacagacacc caaaaccttt
    19381 cggccgtctg gcaggaaatg gaaattatga atctggtttc cctgcacagg ctggatgatg
    19441 cctatgcgcg tttgaacgtg ctgttggaac gcaatccgaa tgcagacctg tatattcagg
    19501 cagcgatatt ggcggcaaac cgaaaagaag gtgcttccgt tatcgacggc tacgccgaaa
    19561 aggcatacgg cagggggacg gaggaacagc ggagcagggc ggcgctaacg gcggcgatga
    19621 tatatgccga ccgcagggat tacgccaaag tcaggcagtg gttgaaaaaa gtgtccgcgc
    19681 cggaatacct gttcgacaaa ggtgtgctgg cggctgcggc ggctgtcgag ttggacggcg
    19741 gcagggcggc tttgcggcag atcggcaggg tgcggaaact tcccgaacag caggggcggt
    19801 attttacggc agacaatttg tccaaaatac agatgctcgc cctgtcgaag ctgcccgaca
    19861 aacgggaggc tttgaggggg ttggacaaga ttatcgaaaa accgcctgcc ggcagtaata
    19921 cagagttaca ggcagaggca ttggtacagc ggtcagttgt ttacgatcgg cttggcaagc
    19981 ggaaaaaaat gatttcagat cttgaaaggg cgttcaggtt tgcacccgat aacgctcaga
    20041 ttatgaataa tctgggctac agcctgcttt ccgattccaa acgtttggac gaaggcttcg
    20101 ccctgcttca gacggcatac caaatcaacc cggacgatac cgctgtcaac gacagcatag
    20161 gctgggcgta ttacctgaaa ggcgacgcgg aaagcgcgct gccgtatctg cggtattcgt
    20221 ttgaaaacga ccccgagccc gaagttgccg cccatttggg cgaagtgttg tgggcattgg
    20281 gcgaacgcga tcaggcggtt gacgtatgga cgcaggcggc acaccttacg ggagacaaga
    20341 aaatatggcg ggaaacgctc aaacgtcacg gcatcgcatt gccccaacct tcccgaaaac
    20401 ctcggaaata atgcaggtcc atcctttcag acggcataag gtttgccggg aagccggggc
    20461 attcgggcaa acggcacgca gttcgcacgc gttattgcac ggcacaccga acccatcggc
    20521 cggcaggatg gcatccgtta aggaaattct gatgaaacac actgtatccg catcggtcat
    20581 cctgcttttg accgcttgcg cgcaattacc tcaaaataac gaaaacctgt ggcagccgtc
    20641 cgaacacacc cgcagtttca cggcagaagg gcggttggca gtgaaagcgg aagggaaagg
    20701 ttcgtatgca aatttcgatt ggacatacca accgcccgtg gaaaccatca atatcaatac
    20761 ccctttgggc agtacgctcg ggcagttgtg tcaagacagg gacggcgcat tggcagtgga
    20821 cggcaaagga aatgtctatc aggcggaaag tgcggaagaa ttaagcaggc agctggtcgg
    20881 tttcaaactg ccaatccaat atctgcatat ctgggcagat ggcaggcgtg tggcgggcgc
    20941 gccttaccgc atcctgccgg acggcatatt ggaacaatac ggttggactg tcggcagaac
    21001 cgccgacagt ggggggcaag tccgaacgtt gcaactgaat aacggaaatt tgaacatcag
    21061 gctggttttc accgaaatcg gtatgccgtc tgaaactgaa accctggaac gctgtgcggc
    21121 gcgcacgaga taaggcggac agatgaatat tgcggacgga cggcaggcgt ttcccgcacc
    21181 tgcaaaactg aatctcgatt tgaggattac tggaaagcgg gaagacggtt atcacaatat
    21241 cgaaagcata ttctgcctga tagatttgca ggataccgta tatttgaaac taagggacga
    21301 cggcaaaatc atcctgcaca atccggttga tggaatgccg caggaagtag atttaagcta
    21361 ccgtgccgca tcgttgctgc aaaaatatgc gcgcaacccc gccggcgtgg aaatatggct
    21421 ggacaaaaaa atcccgacag gggcgggttt gggcggcgga agctcggatg cggcaaccgt
    21481 tttgctggtg ttgaaccgtt ggtggcagtg ttcccgaacg acgcagcagc tgattgactt
    21541 gggcgcaact ttgggtgcgg acgtaccatt ttttattttc ggaaaaaatg cttttgcaag
    21601 cgggataggt gaaaaactga taggaatgga tattccgaaa cagtggtatg tcatcgtcaa
    21661 accgcccgtc cacgtttcca ctgcaaaaat tttcacacac gaaggcttga cacgaaattc
    21721 cgcctcaagc ataatgccga ctttccaaaa cctgcaaccg tttagaaatg atatgcaggc
    21781 agttgtattt aaagaatacc ctgaagtttg gaaagcctat tccgaattgt cccgatatgg
    21841 atttgcctta atgacaggtt ctggtgcgtg tgtattcacg gcgtgtcaag atagggatag
    21901 cgcatacaat atataccgac aagtttcaga tttgtacgag gcatatttgg cagagggtct
    21961 ttcaaaacat ccttggttgt ccgtataaac attgttgggg agtcgtcaag cggttaagac
    22021 actggatttt gattccagca tgcgaaggtt cgaatccttc ctccccagcc aagtcaaacg
    22081 agttggggag tcgtcaagcg gttaagacac tggattttga ttccagcatg cgaaggttcg
    22141 aatccttcct ccccagccag ccctttttgg ggagtcgtca agcggttaag acactggatt
    22201 ttgattccag catgcgaagg ttcgaatcct tcctccccag ccagataaaa gcgtgtaagc
    22261 ctgcttacac gcttttattt catagaaata aaaatattga aatgcctttg tttgtgtcgg
    22321 atgttgcagg tataatgtcg ggcttggtac aagcagaggg aagcattgtg ttttctgagc
    22381 ggaagttaaa cataaaatca ggtgagaata tggctgcgta cgacagtttg atggtattta
    22441 caggcaatgc caatcccgaa ttggcacaac gtgttgtcag gcatttggac atttctttgg
    22501 gcaatgcttc cgtatccaag ttttcagacg gcgaagttgc cgtcgaactg ttggaaaacg
    22561 tacgcgggcg cgatgttttc atccttcagc cgacctgtgc gccgaccaat gacaacctga
    22621 tggaaatcct gacgatggcg gatgcactga agcgtgcttc ggcaggtcgt attaccacag
    22681 ccattccgta tttcggctat gcgcgccaag accgccgtcc gcgttccgtc cgcgttccga
    22741 tttctgccaa actggtggca aatatgctgt attcggcagg gatcgaccgt gttttgactg
    22801 tcgatttgca tgccgaccag attcaaggtt tcttcgatat tccggtggac aatatttatg
    22861 ccaccccgat tctgttgaac gacatcaaac aacagcggat tgaaaatctg accgtcgtca
    22921 gcccggacat cggcggtgtc gtccgcgccc gcgccgtggc aaaatccttg aatgccgact
    22981 tggcaatcat cgataaacgc cgcccgaaag ccaatgtggc agaagtcatg aacatcatcg
    23041 gcgatattca aggcagaacc tgtctgattg tggacgatat gattgacacc gcgaatacct
    23101 tgtgtaaagc tgccgtcgcc ctgaaagagc ggggggcgga acgtgttcta gcctatgcca
    23161 gccacgctgt attctccgga gaggcggtca gccgtatcgc ctcatccgaa atcgaccagg
    23221 tggtcgtaac cgataccatt cctttgtctg aagcggctaa aaactgcgac cgtatccgtc
    23281 aggtaacgat tgccggtctg ttggccgaaa ccgtccgccg cattagcaat gaagaatccg
    23341 tctcatatct tttcaatgaa gaagtgatga caggcagcat gttgctgcca taagcccgaa
    23401 gccgtcttaa gctggtcgcg gccgatgacg gcgattttac ctaacttgga gtatttaaca
    23461 tgacttatga aattcaagct tctgttcgtg aagcacaagg cactggtgcg agccgccgcc
    23521 tgcgtcgcga aggccaaatc cccggcattc tgtacggtga aggtcaagag cctgttgcaa
    23581 tcgctgtgga tcacaaaacc gtattctacg cattggaaaa agaatctttc catactgcgt
    23641 tgattaagtt gtctctgaac ggtgaaacca aagacgttat cgtccgcgat ttccaaatgc
    23701 acccgttccg ccgcgaagtt caacacatcg acttccaagc tgtgaaagcc gatcaacttg
    23761 tacgcatccg tgttcccctg cacatcgtta acgctgaaaa ttcccaagcg gtcaaactgc
    23821 aaggcggccg cgtatctctg ttaaacactt ctgttgaagt agttgctttg cctgccaaca
    23881 tccctgcttt cttggatttg gattgtgccg aagtggttgc cggcgacatt ctgcacttgt
    23941 cagacatcaa actgcctgaa ggtgtagaaa gcgtttccct gaaacgtaac gaaaatctgg
    24001 ctgttgctac cgttaccggt aagaaacgct aattgattga aaagcaggcg gtacgtatat
    24061 gatgcgtacc gccttattgt ttttggctgt gtttcaatat ttggttgatt tcatccgttt
    24121 ataagggaaa accgcttatt tccgttcggg tggaaattta tccagacgta ttgcgcgaca
    24181 acggatggtt ggctcaaaaa cggcatttcg taccggatga aaatgaagaa gatatgtcgt
    24241 tcacattccg gtagctgtcc ggctcgaacc ggctatcaga gatagtcggt caattttcac
    24301 cctgaaaatc acttttcttt taacttgcaa catattccga taaaatggac actttgtaag
    24361 taatcattga tggaagacgc aattatggca accgaaccga accgaaatta tacacgattt
    24421 agaagataat ttcaaacaaa acaatatatt aaaactcaaa caactctttc ccgaagtctt
    24481 ttgtgaagac caaattgact ttgaaaagct caaactcgtc ctcggcgcag aaaaccttgc
    24541 cggtgcgggc gaacgttatc aactcgattg ggcgggcaaa accgcctcct atctcaacct
    24601 gcaaagcccc acttcccgca ccctcgtccc ctgcaaagaa gaatccgcag atttcgacgg
    24661 cacgcaaaac gtgtttatcg aagccgaaaa cctcgaagca ctgaaaatcc tgcaaaaatc
    24721 ctacgccggc agcgtaaaga tgatttacat cgacccgccc tacaataccg gcaacgattc
    24781 cttcgtctat cccgacaaat tctccgaaag ccgcgaagaa tacgcccgcc gcgtgggcga
    24841 taccgacgac gcgggttacc tgaagcgcga cggcgtgttc cagggcgcgt ggcgcaaaaa
    24901 cggcaaagac agtggccatt accacagcaa ctggctctct atgatgctgc cgcgcctgca
    24961 tctggcgaaa accctgctgc gcgaagacgg cgtgattttt atcagcattg acgacaacga
    25021 acaggcgcag ttgaaattgt tatgtgatga agtgtttggg gcggagaatt ttgtcggtca
    25081 gtttccttgg cgcaaacgca cggcaaaatc ggacgtgccg ttcggcgttt ccgccgatta
    25141 tgaatatctg cttgcctatg cccgcagtaa tgcctttatt gccagtatcg atgcggaaga
    25201 acgcagatat tttgaaaccg atgatttccc gaatcgcccg tggcggacgc atgatttgac
    25261 tactcaaaga aatgccagtg aacgaccaaa tagttttttc actatggtta atcctaaaac
    25321 aggcaaagaa tatccggcga atccaaatgc aacttggcgt gttactaagg atacatttca
    25381 agaatattac aatgcgggaa aaatcgtttt ccccgatgat tacgatttcc tcaaaattaa
    25441 aaaccccgtt atgcgttatt ttaaagatga cgacatgaag aaagacggag agcgcttcgg
    25501 acgtaaggca gtcagtacac ggctacctga aaatgtaggt atgtcgctga acggtacaaa
    25561 agaaattacc gaactgttta aaagcaagtt gtttgatttt cccaaaccgt catccctaat
    25621 taaatattta ctgcaaatcc tccatgtttc agacggcctc atcctagact tcttctccgg
    25681 cagcggcacc accgcccatg ccgtgatgca actgaatgcc gaagacggcg gcaaccgccg
    25741 tttcatctgt gtccagctcc ccgaagaaac cgacgaaaaa tctgaagcgc gcaaggcggg
    25801 tttcgacacg attgccgaaa ttgccaaaga acgcatccgc cgcgcaggca ggcagatttc
    25861 agacggcctt caagacggat cggaaacaga tacgggcttt aaagttttca aacttgccga
    25921 aagcggtttc aaacaatggc ggcagcccga gcagtccgat acggaagccc tgcaacgcga
    25981 attgtcgttg aatatcgatt ctgtgctgtc cgaaacgtcg tctgaaaatc tgctctacga
    26041 attgatgctg cgtatgggct tgaagctgac ttgcaaggtt tcgtttttag acgacgtata
    26101 tttcgtggaa gacgaggata cgggcgggct gtacgctttc ctgctgaaac gcgtggatca
    26161 aggtttgatt gatgccgtgc tggcgaagca tcccgctaag gtggcggcat tggacaggct
    26221 gtttgagggc gacgatgcgc ttaaaagcaa taccgtattg cagatgaagg atgcgggcgt
    26281 gatgttcgag tgtgtgtagt cagccgaaag cgggaagtgc cgtctgccgt cattcccgcg
    26341 caggcgggaa tctagaaact caaagttgca agaatttatc ggaaatgact gaaacccaac
    26401 gaacctagat tcccactttc gtgggaatga cgatatatca gtttctgcgc cgacaggtct
    26461 ggattcccgc ctgcgcggga atgacggcaa agaggtagat tttccgcgcg acagcggata
    26521 gaaggaaata aaaatggaac tgaaatttga agaactgccc tatcagcttg atgcggtaaa
    26581 tgccgttgcg aatctttttg cagggcagcc gaaccatgcc cggacattcg atttgaccag
    26641 tcaggggacg gggcggtttg tcggcaacgg cttggatttg gattgggaaa cgctaggcct
    26701 gaatctgaac acggtgcaaa agcaaaatgg acagcctgaa acggaaatcg gcgcgcacgg
    26761 gctgaatttt tctctagaaa tggaaacggg tacgggcaaa acctatgtct atctgcgcac
    26821 gatttacgaa ttaaaccgca gttacggctg gaagaaattt gttattgtcg taccgagcgt
    26881 accgatacgc gaaggcgtgt tgaaaagcct ggaaattacg aaggcgcatt ttgacggagt
    26941 gttcggcagg cccgtgatgc gttatgcgga atattcaagc agccggctat cggacttgcg
    27001 cacttttgcg gtaaacgacc acatcgagat tttggtgatc aatatccagt cgtttgaaaa
    27061 agatggaaac gttatcaata aggtaaacga aagcggggaa acgccgatta agtttattca
    27121 ggaaacgtgt cctatcgtta ttatcgacga gccgcagaat atggaaacgg aaggccgtct
    27181 gaacgctttg gaatcgctca atccgctctt taccctgcgc tattcggcaa cgcataaaca
    27241 accgtaccac aaggtttaca gcctgaatcc cgtgcaggca tacaatttaa agctggtaaa
    27301 gcaaatcgaa gttttgccgg tattggcgga aaacgatgtg aacggcgcat ttgtggagct
    27361 gctggaagta aagcaggcgg ccaaaggccg tccgaaagcc gatttgaaca ttcattatca
    27421 ggataaaaag gaaaccaaga agaaaaaggt atccgtcaaa tgggaagacg atttgtttga
    27481 aaaatcgggc ggtaacgaag cctaccgcca cggtttcatt atcgacggca tggatttcga
    27541 taagcaggaa ttggcgttct caagcggtaa aaccattacg cgcggcggag acggcgatgc
    27601 ggtgcgcgat gaaattatga aaaaccaaat ccgcgaaacg gtaagggagc atttggcgaa
    27661 ggagaaacgg ctgaatccgc tggggattaa ggtgttgtct ctgttcttca tcgaccgtgt
    27721 ggagaattac cgtacagaag acggaacggc aggcaagttt gccctttggt ttgaagaaat
    27781 ctatcgggaa cttgcaggca ataccgatac ggcaggcgta cacgacggct atttctcgca
    27841 agacaggaaa ggccgtctga aaaacaccga cggcacgacg caggcggaca acgataccta
    27901 ccgcctcatt atgcgcgaca aggaaaccct gctttccttt gacagcccgc tgcgctttat
    27961 cttttcccat tccgcactga aagaaggctg ggacaacccc aacgttttcc aaatctgcac
    28021 gctcaacgaa acccgttcgc cgctgaaaaa gcggcaggaa atcgggcgcg ggctgcgtat
    28081 cgccgtcaat caggaaggac ggcgcgtgcg cgatgaaaac gtgaacatac tgaccgttgt
    28141 gccgaacgaa agctacgaat tgtttgccgc caatctgcaa aaggaatacg aagacgaatg
    28201 cggtattaaa tttgccgccg aaaacatcaa aaacggcaat aagaagaaaa aacagttatt
    28261 ccgcaaagat ttcccgctcg accccgaatt tcaggcaatt tgggacaagt tgaaatacaa
    28321 aacgcgctat cgcgtgcgct tcgatacgga agaattgatc aaacaggctt cggaagcggt
    28381 ggcaaacctg ccggaaatcc aaaaaccgaa aatccgcatc cgcaaggcgc aattaaaaca
    28441 atcacaaacc tacggtatcg aaacagttga aattgccggc cgcagccgcg aaatggacgt
    28501 tcaatgggag attccggaca tactcggcga gattcaaaga aaaacggggc tgacgcggcg
    28561 cacggtgtac gaaatcatca tacagtcagg ccgtctgaaa gatgtagccg gtaatccgca
    28621 acgcttcatc gaccttaccg ccgaagcggt aaaccgcagc ctgcacgcgt tgatggcggc
    28681 aggaatcgag tatgagagaa ccggcgaagt gtacgaccaa aagctgttgg aagatatggc
    28741 gcgcgaaggt atcgagtttt acgaaaacgg ttttacattc acagtaagca atccgcaaaa
    28801 aaccatttgc gaaaactaca tccctttgga ttccggcacg gaaaaagcct ttgcccaaaa
    28861 ttgcgaggat tatgatgcga aaaatgaagg aggcgtggcg ttttacttca aactgcccgg
    28921 ctggttcaaa atcccgaccc cgctgggcaa ttacaatccc gattgggcgg tggtaaaaca
    28981 ggttcgggat aaagtgtatt tcgttgcgga aaccaaaaac accggcaaag gcattcagac
    29041 cggcgtggat atggacaagc tgcgccaaaa tgagaggctg aaaatcaaat gcggcaagcg
    29101 gcattttgaa gcgctgggcg gtttggcata ccgtgttgtg gaaaaagtgg gggatttaaa
    29161 gtcggaaaaa gaggagcagg cttaaaacaa acaggtgtaa tcgtagtatg gcgatgttgg
    29221 attggggcgg cggcaaccga agatgcggat atggtaatgg ctttgattgg gtaaaccgat
    29281 cggggactga agattgtttc agacggtctg ttgattttct tatttcggaa atgggaagat
    29341 ggaaggctat tgccctgtca gacgcgtcca aagcctttgc caccggcttc ttttttctac
    29401 attttccagt gcgacgattt ctttttcggc aagggtgtat ccgttttgtc tgattttgat
    29461 ttttcctaaa atctgcccct tttttaccgg ggcgggaatc ggctgtatgg tttccaaaat
    29521 ttgttcggtt gttttcgctt ccttatgtgg cagagtgatg taggcttctt tgaggaagcc
    29581 tgcgcggacg gtttttttgc tgcctccgga aatttggatt tgggcaacgg ttttgccttt
    29641 cggatatatt ttgggcgtat cgaaggcttg caatgcccgg ttcagcagct tgctgttgtc
    29701 tgatgcgcgt gtttccgccg attccgaacc caatgtgatg acaaggatgt gcctgccgtt
    29761 gccggagtat gacacggcaa ggttgtagcc gccgctttct gtgtgtccgg ctttcagacc
    29821 gtttacattg ttgtccctat ataaaaggat attgcggttg ttttgctcta tatttttgaa
    29881 tttgaaagat ttgatggaaa acagcgggta atattccgga aagtcgcgca tcaatgcttc
    29941 agacagcagg gcgaggtctt tggcggtgga aacctgtcct tctctactca agcctgtcgg
    30001 gtttttgaat acagtgttct tcatgcccaa gcgtcgggct tctttgttca tttgttgcac
    30061 aaaattttca atcgagccgt tgcccagtcg gccgacaagg gttagggcgg catcgtttgc
    30121 ggatagtgca atcatgcctt ttaagagttt gtcggtgctg accgtatcgc cgggacgtac
    30181 aaacattctg cttccttctg aagcccatgc ggattcgggt atttttaagt tttcttcaga
    30241 tcggatattt cccgatttca tgtttttgaa aaccagatat gcggtcatca gttgggttag
    30301 tgccgccggt tcgacagggg tattgatgtt tttggcggat aaaatctgtt tgctttgaag
    30361 gtcgataacg atgtgtgccg ctgtgagggt ttcgggtgtt tggaacgtgg gggcggcgtg
    30421 taccgccggt ttgttgggcg cgggcgatgc ggccgttgcg tgagaaacgc ctaagatgat
    30481 ggaaagcagg acgggcagga ttttatgtgc tgtcatgaaa tattctaatt gtgtgcgtgt
    30541 ttcagtctgc cgattatacg cttagggtgt ctgatcgggc ggatttttct tgctttcgcg
    30601 ccgtcttggg cgtatggttt tgggttttgc gattttaata aaccgattat cccatattga
    30661 attatgaaca cgccccttcc ttattccaat tacctcatcc gcatcctgac ggcatctgtc
    30721 tatgatgtcg cggtcgaaac gcctttggaa ccggcacgca gcctttctgt acgtttgaaa
    30781 aacaacatcc ttttgaaacg cgaagatttg cagccggttt tttcgttcaa aatacgcggc
    30841 gcgtacaaca aaatgtccaa gttgccgaaa gatgcgctcg cttgcggcgt gattgcggca
    30901 agcgcgggca atcacgcaca aggcgtggca ttgtccgcac agcgtttggg ttgccgtgcc
    30961 gttatcgtca tgccggagac tacgccgaaa atcaaagtgg atgcggtcaa aagccgtggc
    31021 ggcgaggtgg ttttgcgggg cgtttcatac aacgatgcct acgattatgc gatggagttg
    31081 gcggaaaaag aagggttaac ctatatcgcg ccgtttgatg atcctgatgt gattgcggga
    31141 caggggacgg tggggatgga aattgtcagc cagcatcccg atccaatccg cgccgtattc
    31201 gtaccgatag gcggtggcgg tttggcggcg ggcgtggcgg catttatcaa gcaggtccgc
    31261 cccgaaatca aagttatcgg cgttcagacc aacgattcct gctgtatgaa gcagtcggtc
    31321 gaagcgggtg aaatcgtcca tttgaaagat gtcgggctgt tttcagacgg cactgcggtc
    31381 aaagtcgtcg gaaacgaaac cttccgcctc tgcaaagaac ttttggatga aatcattaca
    31441 gtcgataccg atgcggtttg cggcgcggtc aaggatattt tcgatgacac gcgcagcatt
    31501 accgagccgg cgggcgcgtt ggcgttggcg ggtctgaaag cctatatcgc ccgagaaggc
    31561 gcggaaaacc aaaccctgat tgccgttacc agcggtgcga atatgaattt tcaccgtttg
    31621 cgccacgttt cggaacggag cgaattgggc gagggcaacg aaggtatttt tgccgttacc
    31681 atccctgaag aacgcggcag cttccttaag tttgtcaata tattgggaaa taggaatatt
    31741 accgagttca actaccgcta cggggacgat gaaaaagcgc atatctttgt cggacttcaa
    31801 gcggcaggcc cgcaggattt ggcggttatc ggcagccggt tggatgaggc gggattgccc
    31861 aatgtcgacc tgaccgatga tgagattgcc aaaatccata tccgctatat ggtcggaggg
    31921 cggacggaca aagtagaaaa cgagcgtctg gtcagttttg agtttccgga gcgtccgggg
    31981 gcgttggcgc gttttttgaa ccatatgcag ggcggttgga acattacgct cttccattac
    32041 cgcaaccacg gtgcggatta cgggcggatt ttggtcggta tcgatgtgcc gccgcacgat
    32101 gccgccgcat ttgacggttt cttggaaagt ctgggataca gctatcacga ggaaacgcaa
    32161 aatgccgcgt acaagctgtt tcttgcctga cgcttgaaag cacaatgccg tctgaaagcc
    32221 tttcagacgg cattgcgctt tcatggttaa atcgaatatt caatcagttc gttttgagag
    32281 aagacataaa cctgtttcgg aatcagcttc aattctttgc cttcggcgat tgggtaacgc
    32341 gcggcatcgc tgccagccag cgtgatatgc acgtcttgtt tgccgtgttt caccaaaata
    32401 tgcgtcaatg ccccgacggc gtggactttt tcgatttcgg cacaaatcat cggtgtttcg
    32461 tgttcggcgg cgatctgcca ttcgtgcggg cggatatagc cggtggcggt ttgttcctgc
    32521 catttgtatt gtgcgtccaa tttccacgcg aagccgttat aatgccagaa gcctttttcg
    32581 atgcgtcctt caaaagcgtc ggtttcgccg aggaactcgg taacgaaggc attttcgggt
    32641 ttgcggtaaa tagcttcggc gctgccggtt tgttcgattt tgccgtggtt catcacgacg
    32701 atttcgtcgg aaacttcgag ggcttcttct tggtcgtgcg taaccagaat gctggttaca
    32761 cccaggttgt gatggatgtc gcgcagccag gtgcgtaatt ctttgcgtac tttggcatcc
    32821 aacgcgccga agggttcgtc caaaagcagg agtttcggtt cgaccgcaag cgcacgggcg
    32881 agggcgatgc gctggcgttg cccgccggag agttggtgcg gataggattt tgccaaatgc
    32941 gagagctgca cgagcttgag caattcttcg actttggcgc ggatttgtcc tttggacggg
    33001 cgttcggact tgggcaatac ggtcaaaccg aaggcaacgt tgtcaaacac gttcatatgg
    33061 cggaaaaggg cgtagtgttg gaacacgaag ccgactttgc gctcgcgcac gtgcttggcg
    33121 gttacgtctt gcccatcaaa cagaatcttg ccgccgtcgg cgttttccag tccggcgata
    33181 atgcgtaaaa gcgtggtttt gccgcagccg gacgggccga gcagggaaac gagtttgccg
    33241 gtggggacgt tgaggttgat gtttttcagc gcgtgaaaat tgccgaagtg tttgtttaag
    33301 ttttggatgg tgatactcat actgcgttcc tttcggcggc ggcgagtttt ttgtcttgta
    33361 atttggtgat gatgttctgc accgccagcg tcgccagtgc caaaagtgcc aatacgccgg
    33421 agagggcgaa tgcgccggtg aagttgtatt cgttgtagaa gatttcgacc aaaagcggga
    33481 cggtgttggt ttcgccgcgt atgtgtcccg ataccacgct gaccgcgccg aactcgccca
    33541 tcgcgcgggc gttggtgagg atgatgccgt agagtaacgc ccatttgatg ttgggcaggg
    33601 taacgcgcca aaacatctgc cagccgcttg cgccgagtat caatgccgcc tgttcttcgc
    33661 tgtcgccctg tgcctgcatc agcgggatga tttcgcgtgc gacaaagggg aaggtaacga
    33721 acagcgtcgc caaaacaata ccggggatgg cgaagataat ctgtatgcct tgcgcttcga
    33781 gccggccgcc caatgccgtg tgcgcgccga acaataagac gaacattaaa ccggccacca
    33841 cgggcgatac ggaaaacggc aaatcgagca gggtagtcag caactgcttg ccgcgaaaat
    33901 caaaacgggt cagcagccac gccatcgcca cgcccaagac ggcattgacg gggacgacaa
    33961 tcagcgcggt aatcagcgtc aatttgatgg cagaccacgc ttcgggatcg tttaaggatt
    34021 tcaggtacaa atcccaaccg ccttttaagg cttcgtaaaa cacggcgacg agcggcacga
    34081 ccagcatcag cagcagaaag cccagcgcgg cggcaatcag caacacgcgc agccggcgcg
    34141 gttcggtcag gttgggattg gcggaatagg gtttcatggc ggtggtgttc tctggttggt
    34201 tttaaaatgt ttggaggtcg tctgaaaaac tgtgtttttg ggagcggatt cgttttcaga
    34261 caacctttta ttgattaagg gaataaaaac gtctagctac cgtcattccc gcgcaggcgg
    34321 gaatccacca cagggcaaca ggaaaacaga aaataaataa ggcagccgaa attcaccaat
    34381 ggattcccgc ctgcgcggga atgacggtaa caggtatttc agacgacctc aacccttcgc
    34441 gcccgaacgc ctgcccaacg cccacagcat cacgttcagc gcaaacagaa tgacaaacga
    34501 aaccagcagc ataaacaacg ccaccgccga cgcgccctgt acgtcgaact gttccagctt
    34561 gcccgtaata atcagcggca ggatttcaga aaccatcgga atattgcccg cgataaaaat
    34621 caccgagccg tattcccccg ttgcccgcgc gaacatcatt cccgcgccgg tcaagagtgc
    34681 cggcgtgatt tccggcagca gcacgcggcg gaacgtcgta aagcggtttg cgcccaaagt
    34741 cgccgccgct tcctcatatt cgcccgataa ttcctccaac accggctgca cggcgcggac
    34801 gataaagggc aggctgacga cgaccagcgc aatccaaatg ccgacgggcg taaacgcgat
    34861 tttgatgccc aaaggctcga aaaaacggcc tatccaaccg ttgggcgcat acagggttgc
    34921 caacgcgata cccgtaaccg ccgtcggcag cgcaaacggc aaatcaacca gcgcgttcgc
    34981 cagacccttg cccggaaatt catagcgcac caatacccac gccaccagcg tgccgaacac
    35041 gacattggtc agcatcgcat aaaacgacat ccgcaaactc agccacaccg ccgccaacac
    35101 gttcggctcg gcaatcgtgt tccaaaagcc gccccagccg atttccgccg ccttcgccgc
    35161 catcatcgca aacggcaaga ccacaagcag cgacaggcac aatacggtca gcccgaggct
    35221 gagtttgaag ccgggcagta cgccgggcgt tttgagcggt aacataaaac aatgctgaaa
    35281 ataaggaaaa ggaaggacta ctttaacgat gccgtctgaa aaacggaaag aatggaaagt
    35341 ttggtacaaa gacgaatttg ttataaagcg gttggcagtt tctcaagcgg gcgcgatgtt
    35401 ttaaaatata gtggattaaa tttaaatcag gataaggcga cgaagccgca gacagtacaa
    35461 atagtacggc aaggcgaggc aacgccgtac tggtttaaat ttaatccact ataacgcctt
    35521 gttttgacgg aaaaccatca tataaaggaa cacttatgca gattttatct tttcagccgg
    35581 acattgcgga acgtatgctg gaaggtacgg aaggcgagtc ggtcaacgaa aacgcacaat
    35641 tcgtccgtac ggacaacggc tattggattg cgtggcatga aggcgtagcg gcactgcttg
    35701 cgcccgatac gccgccgggc attccctgtt tttgggtgga aggcgcggaa agccttgaag
    35761 agttgtgcgt catggtggaa cgcggcgagt ttgacgaagt ggaagagttt gacggcgatg
    35821 acgacgaatg gctcgaaacg gcacagggtt gcggacacca cggcgaagct tgcgcctgcg
    35881 gacattaaag gcattgcagg cttgccgcaa gggggcaagg ctttgccgtt ttttaaataa
    35941 tcggtggatt gcatctgttt gcaatgggct gaacgcttcc ctttgtattt tattgaataa
    36001 aaaaacttat cttggtatta taattaaggc agcatcaatt attttgggat ggcaataaac
    36061 gcaaagcatt gatttgcgcc gattgcagac ttattatagc aggttgcggc gcggacttaa
    36121 tgggaattgt ttatagagca tgatggtctg aaacatcatt aattaaaaat accattaatc
    36181 cgatttatat ttatttcaat ttcaatggaa aaacatcaat gacaatgatt ttaagcattt
    36241 taagcctgtt ttttatcatc agactgttat ttttagccgt ctctattaaa catgaaaaag
    36301 ccttgattgc caaaggggcg aaacaatacg gaaaaaccaa ttccacgctg cttgcggcag
    36361 ttcatacgct ttattatttg gcgtgttttg tttgggtatg gctttctgac actgctttta
    36421 atggcatatc cttgattggt acgctgacgg tgatggcttc gtttgtgata ttgtcattga
    36481 ttattaagca gttgggggag atttggacgg ttaaaatcta tattttacca aatcatcaaa
    36541 ttaatcgttc gtggttgttt aaaacattcc gccaccccaa ttatttttta aacatcatac
    36601 ccgaactgat tggcatcgcc ttattatgtc aagcgtggta tgttttattg attggcctgc
    36661 ccatttattt gctggtctta tttaagcgta tccgacaaga agaacaggcg atggcaacac
    36721 ttttttaacc cgtttcatca attatag
//
LOCUS       DBBZXW010000007        35168 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.007, whole genome shotgun sequence.
ACCESSION   DBBZXW010000007 DBBZXW010000000
VERSION     DBBZXW010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35168
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.007"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            81..1046
                     /locus_tag="ACJJD2_000351"
     CDS             81..1046
                     /locus_tag="ACJJD2_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7578958.1"
                     /translation="MLRLTALAVCTALALGACSPQNSDSAPQAKEQAVSAAQTEGASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESSKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGSSSRLGGWL
                     HKDIGVPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNP
                     LVAETTAWKKEQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1064..1240
                     /locus_tag="ACJJD2_000352"
     CDS             1064..1240
                     /locus_tag="ACJJD2_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578959.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFYWNLPYPLPDTEA
                     SNKAFRSDGSDCLV"
     gene            1275..2243
                     /locus_tag="ACJJD2_000353"
     CDS             1275..2243
                     /locus_tag="ACJJD2_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7578960.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            2233..3207
                     /locus_tag="ACJJD2_000354"
     CDS             2233..3207
                     /locus_tag="ACJJD2_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HGG7578961.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFLTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYTSLPAVGKFGFELVVMMGGSLLLFYTLVKQGGRDLSRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFMAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3252..3878
                     /locus_tag="ACJJD2_000355"
     CDS             3252..3878
                     /locus_tag="ACJJD2_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HGG7578962.1"
                     /translation="MTQERFPSFFNQAPTITVRDALAEFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGAGEINGTLTLRRKDNGKTVAVSLNAALQPFAPE
                     MRELMPKAVGGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3962..4720
                     /locus_tag="ACJJD2_000356"
     CDS             3962..4720
                     /locus_tag="ACJJD2_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7578963.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLACTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDFADRYLTELSGGQRQRAMIAMVFCQRTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPDDIFTAANIKTLFDMDVSVLDHQSKKLIVHHI"
     gene            complement(4779..5117)
                     /locus_tag="ACJJD2_000357"
     CDS             complement(4779..5117)
                     /locus_tag="ACJJD2_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HGG7578964.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            5212..5424
                     /locus_tag="ACJJD2_000358"
     CDS             5212..5424
                     /locus_tag="ACJJD2_000358"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578965.1"
                     /translation="MPETVIPAQAGIPISAFQQYLKVSVNPNFHIPNRTETTAFDLKT
                     YGSSCPPLYFLQLSAYPALGKNQKNR"
     gene            5582..9568
                     /gene="purL"
                     /locus_tag="ACJJD2_000359"
     CDS             5582..9568
                     /gene="purL"
                     /locus_tag="ACJJD2_000359"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HGG7578966.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDRQKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQAYGKPDHIASPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDAFRAI
                     CERERCPFAVVGTATGDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPYAT
                     EGNPFGKKPFNAGDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQ
                     TPVADCAVTMMGFNTYRGEAMSMGEKPAVALFDAPASGRMCIGEAITNIAAVNIGDIG
                     NIKLSANWMAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGADK
                     KSVVSPLSLIISAFAPVEDVRKTVTPELKNVEDSVLLFIDLGFGKARMGGSAFGQVYN
                     NMSGDAPDLDDTSRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLD
                     IDLNLLLAQTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVA
                     DIINLFYQQQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRL
                     RDNPACADSEFALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQ
                     IEMAAAFTRAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSIL
                     FHPALRDQFAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARL
                     SMVHVPKSASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQV
                     TQTYPLNPNGSPQGIAGITNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLF
                     AGARKALG"
     gene            9663..10421
                     /gene="gloB"
                     /locus_tag="ACJJD2_000360"
     CDS             9663..10421
                     /gene="gloB"
                     /locus_tag="ACJJD2_000360"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HGG7578967.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            10735..15210
                     /gene="mspA"
                     /locus_tag="ACJJD2_000361"
                     /gene_synonym="ausI"
     CDS             10735..15210
                     /gene="mspA"
                     /locus_tag="ACJJD2_000361"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
                     /protein_id="HGG7578968.1"
                     /translation="MRFTHTTPFCSVLSTLGLFAVSPAYSSIVRNDVDYQYFRDFAEN
                     KGAFAVGASNISIQDKQGKILGRVLNGIPMPDFRVSNRQTAIATLIHPQYVNSVKHNV
                     GYGSIQFGNDTQNPEEQAYTYRLVSRNPHPDYDYHLPRLNKLVTEISPAALSSVPLLG
                     NGQPKANAYLDTDRFPYFVRLGSGTQQVRKADGTRTRTAPAYQYLTGGTPLKVLGFQN
                     HGLLVGGSLTDQPLNTYAIAGDSGSPLFAFDKHENRWVLAGVLSTYAGFDNFFNKYIV
                     TQPEFIRSTIRQYETRLDVGLTTNELIWRDNGNGDSTLQGLNERITLPIANPSLAPQN
                     DSRHMPSEDAGKTLILSSRFDNKTLMLADNINQGAGALQFDSNFTVVGKNHTWQGAGV
                     IVADGKRVFWQVSNPKGDRLSKLGAGTLIANGQGINQGDISIGEGTVVLAQKAASDGS
                     KQAFNQVGITSGRGTAVLADSQQIKPENLYFGFRGGRLDLNGNNLAFTHIRHADGGAQ
                     IVNHNPDQAATLTLTGNPVLSPEHVEWVQWGNRPQGNAAVYEYINPHRNRRTDYFILK
                     PGGNPREFFPLNMENSTSWQFIGNNRQQAAKQVAQAENARPDLITFGGYLGENAQTGK
                     AAPSYSKTNIEWVNGPNTPHKPSPYTNTPTRTGAGVPTITASKKAATPAPTSHGMPTA
                     PKTGNFSDMTGEAAIEKTRHIANAAVYGRPEYRYNGALNLHYRPKRTDSTLLLNGGMN
                     LNGEVLIEGGNMIVSGRPVPHAYDHQAKREPVLENEWTDGSFKAARFTLRNHARLTAG
                     RNTAHLDGDITAYDLSGIDLGFIQGKTPECYRSYHSGSTHCTPNAVLKAENYRALPAT
                     QVRGDITLNDRSELRLGKAHLYGSIRAGKDTAVRMEADSNWTLSQSSHTGALTLDGAQ
                     ITLNPDFANNTHNNRFNTLTVNGTLDGFGTFRFLTGIVRKQNAPPLKLEGDSRGAFQI
                     HVKNTGQEPQTTESLALVSLNPKHSHQARFTLQNGYADLGAYRYILRKNNNGYSLYNP
                     LKEAELQIEATRAEHERNQQAYNQLQATDISRQVQHDSDATRQALQAWQNSQTELARI
                     DSQVQYLSAQLKQTDPLTGILTRAQNLCAAQGYSVDICRQVAKAADTNDLTLFETELD
                     TYIERVEMAESELDKARQGGDAQAVETARHAYLNALNRLSRQIHSLKTGVAGIRMPNL
                     AELISRSANTAVSEQAAYNTGRQQAGRRIDRHLTDPQQQNIWLETGTQQTDYHSGTHR
                     PYQQTTNYAHISIQTGITDRLSVGTILTDERTNNRFDEGVSARNRSNGAHLFVKGENG
                     ALFAAADLGYSNSRTRFTDYDGAAVRRHAWDAGINTGIKIDTGINLRPYAGIRINRSN
                     GNRYVLDGAEINSPAQIQTTWHAGIRLDKTVELGQAKLTPAFSSDYYDTRQNSGSALS
                     VNDRTLLQQAAHGTLHTLQIDAGYKGWNAKLHAAYGKDSNTARHKQAGIKIGYNW"
     gene            15442..16896
                     /gene="mgtE"
                     /locus_tag="ACJJD2_000362"
     CDS             15442..16896
                     /gene="mgtE"
                     /locus_tag="ACJJD2_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HGG7578969.1"
                     /translation="MSIEPTPPNLENDGIENDVERVSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(16982..17890)
                     /gene="hslO"
                     /locus_tag="ACJJD2_000363"
     CDS             complement(16982..17890)
                     /gene="hslO"
                     /locus_tag="ACJJD2_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HGG7578970.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLMNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            18135..18890
                     /locus_tag="ACJJD2_000364"
     CDS             18135..18890
                     /locus_tag="ACJJD2_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HGG7578971.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            18909..19127
                     /locus_tag="ACJJD2_000365"
     CDS             18909..19127
                     /locus_tag="ACJJD2_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578972.1"
                     /translation="MSMPEIPKWYDDDGQIVSCTEKIKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            19272..19616
                     /locus_tag="ACJJD2_000366"
     CDS             19272..19616
                     /locus_tag="ACJJD2_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HGG7578973.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            19616..20308
                     /locus_tag="ACJJD2_000367"
     CDS             19616..20308
                     /locus_tag="ACJJD2_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HGG7578974.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            20375..21595
                     /gene="argJ"
                     /locus_tag="ACJJD2_000368"
     CDS             20375..21595
                     /gene="argJ"
                     /locus_tag="ACJJD2_000368"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HGG7578975.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLSFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            21655..23064
                     /locus_tag="ACJJD2_000369"
     CDS             21655..23064
                     /locus_tag="ACJJD2_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HGG7578976.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETTAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            23254..24645
                     /gene="hrpA"
                     /locus_tag="ACJJD2_000370"
     CDS             23254..24645
                     /gene="hrpA"
                     /locus_tag="ACJJD2_000370"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HGG7578977.1"
                     /translation="MFPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSQHFNGAPVLEVSGRTYPVEILYRPLIGKDEDDAEIELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEENFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            24746..25873
                     /locus_tag="ACJJD2_000371"
     CDS             24746..25873
                     /locus_tag="ACJJD2_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HGG7578978.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            26050..27627
                     /gene="lpt3"
                     /locus_tag="ACJJD2_000372"
     CDS             26050..27627
                     /gene="lpt3"
                     /locus_tag="ACJJD2_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HGG7578979.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKTSRLLIALFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRHKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSRIGQGSIQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRDGKAEYVYPQ"
     gene            27729..30935
                     /locus_tag="ACJJD2_000373"
     CDS             27729..30935
                     /locus_tag="ACJJD2_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HGG7578980.1"
                     /translation="MDARSNPANVSDGLQNSSSHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAASKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRSPEVRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTSTRGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAAIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYGRIAPEEAR
                     EIFIRGALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLP
                     EMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWV
                     ENPTSAATAKTVGFDNPTYATQQPTPSPEREGRGEGKTVAAQTNFSATAANPLPQERE
                     QSASASTFSDDLRPANLQQTAPSPVGEGWGESKTVATQTNFSATSTLSDDPKPKKQPA
                     PQKGRLKPLPLADIRTFQAWLKTAECDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQT
                     ADGKFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPK
                     QIRRICVPVPDFITKFLESNPDRQATIIPQLAHFIAKSASDMRILEQIDQDAWAAQEL
                     PEHCYLNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTFRDNTQEFERDNVTTWDIGT
                     LPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQ
                     VKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKR
                     ARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAPGFATRTPWA
                     QWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKNDGLVKQGQPISDNL
                     AAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIF"
     gene            31002..31832
                     /locus_tag="ACJJD2_000374"
     CDS             31002..31832
                     /locus_tag="ACJJD2_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7578981.1"
                     /translation="MSLENFQLIKTQLGVPSYENDRVAIYQGDCIQLMDKISKGSFQM
                     TITSPPYNIGKEYESILDLEHYLEWCERWMQSIHHLTEDSGCFWLNLGYLHVEKKGLA
                     VPIPYLLWDKTNFFLLQEVVWNYAAGVACRNRFSPRNEKLLWYVKNPAKYTFNLDAVR
                     DPNVKYPNQKKNGKLKCNPLGKNPTDVWQIAKVTSGRNRSSRERTAHPAQFPLELIER
                     IIRASSNQNDVILDPFIGSGTTALAGLKNNRFVIGFEINDEYIDIIKERFKEYDLQNT
                     "
     gene            complement(31889..32488)
                     /locus_tag="ACJJD2_000375"
     CDS             complement(31889..32488)
                     /locus_tag="ACJJD2_000375"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ScaI family restriction endonuclease"
                     /protein_id="HGG7578982.1"
                     /translation="MNRSKISPYASLNEELWISKTEELIKQHPLSEKEIVQLCLDSWE
                     NIFSSRIGNLQIGKNFFPSPQIVGALLHALIPANIEARFENWQGEKNKYDKDIVYIKD
                     DYYSIELKTSSDPKYIFGNRSYAQPQDGITGKSKNGYYLTINFEKFMPDLKLRPEIKI
                     IRFGWLDHTDWIAQTAATGQQARLSPEAYRSKLKILYQK"
     gene            complement(32490..32705)
                     /locus_tag="ACJJD2_000376"
     CDS             complement(32490..32705)
                     /locus_tag="ACJJD2_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7578983.1"
                     /translation="MENELVEFGKRVKHYRLLNGWSQEELAEKVGLHRTYIGSVERGE
                     RNISLLNISLLAKSFSINISELVEGIK"
     gene            complement(33137..33604)
                     /locus_tag="ACJJD2_000377"
                     /pseudo
     CDS             complement(33137..33604)
                     /locus_tag="ACJJD2_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            33836..34048
                     /locus_tag="ACJJD2_000378"
     CDS             33836..34048
                     /locus_tag="ACJJD2_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger domain-containing protein"
                     /protein_id="HGG7578984.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            34232..34500
                     /locus_tag="ACJJD2_000379"
                     /pseudo
     CDS             34232..34500
                     /locus_tag="ACJJD2_000379"
                     /inference="COORDINATES: protein motif:HMM:NF017953.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
     gene            complement(34590..35039)
                     /locus_tag="ACJJD2_000380"
     CDS             complement(34590..35039)
                     /locus_tag="ACJJD2_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HGG7578985.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT         8868 a        10391 c         8401 g         7508 t
ORIGIN      
        1 ttatcattta tcctttctaa agccgttccg gtttgtccga ccggcggctt tgccccaata
       61 tccccatttt ggagacacct atgttacgtt tgactgcttt agccgtatgc accgccctcg
      121 ctttgggcgc gtgttcgccg caaaattccg actctgcccc acaagccaaa gaacaggcgg
      181 tttccgccgc acaaaccgaa ggcgcgtccg ttaccgtcaa aaccgcgcgc ggcgacgttc
      241 aaataccgca aaaccccgaa cgcatcgccg tttacgattt gggtatgctc gacaccttga
      301 gcaaactggg cgtgaaaacc ggtttgtccg tcgataaaaa ccgcctgccg tatttagagg
      361 aatatttcaa aacgacaaaa cctgccggca cgctgttcga gccggattac gaaacgctca
      421 atgcctacaa gccgcagctc atcatcatcg gcagccgcgc agccaaagcg tttgacaaat
      481 tgaacgaaat cgcgccgacc atcgaaatga ccgccgatac cgccaacctc aaagaaagct
      541 caaaagagcg tatcgacgcg ctggcgcaaa tcttcggcaa acaggcggaa gccgacaagc
      601 tgaaggcgga aatcgacgcg tcttttgaag ccgcgaaaac tgccgcgcaa ggcaaaggca
      661 aaggtttggt gattttggtc aatggcggca agatgtccgc cttcggctcg tcttcacgac
      721 tgggcggctg gctgcacaaa gacatcggcg ttcccgctgt tgacgaagcc atcaaagaag
      781 gcagccacgg tcagcctatc agctttgaat acctgaaaga gaaaaatccc gactggctgt
      841 tcgtccttga ccgcagcgcg gccatcggcg aagagggtca ggcggcgaaa gacgtgttgg
      901 ataatccgct ggttgccgaa acaaccgctt ggaaaaaaga acaggtggtt tacctcgttc
      961 ccgaaactta tttggcagcc ggtggcgcgc aagagctgct gaatgcaagc aaacaggttg
     1021 cggatgcgtt caacgcggca aaataatgaa acggcggcat tcgatgccgt ctgaaacacg
     1081 gatgcaaacc gcttcctgtg tttcagacgg cattgcccga tacgggcgtt atcgcgggaa
     1141 tggcggcaag cgtttttatt ggaacttgcc ctatcctctg cccgatacgg aggcttcaaa
     1201 caaggctttc cgctccgacg gttcggactg ccttgtttga atcttctacg ccttaacgct
     1261 tttcctttct gtttatgact gccaaacctt tttccctcaa cctgaccaac ctcctgctgc
     1321 tggcggtatt gtttgccgtc agcctgtcgg tcggcgttgc cgatttccgc tggtcggatg
     1381 tgttttcgct gtccgacagc cagcaggtta tgttcatcag ccgcctgccg cgcacgtttg
     1441 cgattgtgct gacgggcgcg tcgatggcgg tggcggggat gattatgcag attctgatgc
     1501 gtaaccgttt tgtcgagcct tctatggcgg gcgcgggtca gagtgcggct ttgggtttgc
     1561 ttctgatgtc cctgctgctg cctgccgcgc cgctgccggt caaaatgtcg gttgccgccg
     1621 ttgccgcgtt aatcgggatg ttggtgttta tgatgcttat ccgccgcctg ccgccgacgg
     1681 cgcaactgat ggtgcctttg gtcgggatta ttttcggcgg cgtggttgag gcggtggcca
     1741 cctttattgc gtatgaaaac gaaatgctgc aaatgctggg cgtgtggcaa cagggcgatt
     1801 tttcgagcgt gctgctgggg cggtacgagc tgctttggat tacgggcggt ttggcggtgt
     1861 ttgcctatct gattgccgac cggctgacga ttttggggct gggcgaaacg gtcagcgtga
     1921 atttgggttt gaaccggacg gcggtgttgt ggtcggggct gattattgtg gctttgatta
     1981 cgtcgctggt tatcgttacg gtcggcaata ttccgtttgt cgggctggtc gtgccgaaca
     2041 tcatcagccg cctgataggc gacaggctgc gccaaagcct gcctgcggtg gccttgttgg
     2101 gcgcgtcttt ggttttattg tgcgacatta tcggacgcgt gattgtgttt ccgtttgaaa
     2161 ttccggtatc gaccgtcttc ggcgtattgg gtacggcgtt gtttttatgg cttttgttaa
     2221 ggaaacctgc tcatgccgtc tgaaaaaaat atcggtttta tggcaggaag cagccgtccg
     2281 ttgtgggttg cctttgcgct gttgctggtt tcctgcgtcc tgtttttaac gctcaacgtc
     2341 aaaggcgatt gggactttgt actgcacctg cgtctgacca aacttgccgc gctgctgatg
     2401 gtcgcctatg cggtcggcgt gtccacgcaa ctcttccaaa cgctgaccaa caatccgatt
     2461 ctgacccctt cgattttggg tttcgattcg ctgtatgtgt ttttgcagac cttgctggtg
     2521 tttacgttcg gcggcgtggg ctatacgtcc ctgcctgcgg tcggcaagtt cggctttgaa
     2581 ttggtcgtta tgatgggcgg ctcgctgctg ttgttctaca cgctcgtcaa acaaggcggg
     2641 cgcgatttgt cgcgcatgat tttaatcggc gtgattttcg ggattttgtt ccgcagcctg
     2701 tcgtcgctgc tttcgcgcat gatcgacccc gaagaattta tggcggcgca ggcgaatatg
     2761 tttgccggat tcaataccgt ccacagcgag cttttgggca taggcgcgct gattctgctc
     2821 gtcagcgcgg cggtcgtttg gcgcgaacgc taccgcttgg acgtacacct tttggggcgc
     2881 gaccaagccg tcaatttggg catcagctac acgcgcaaca ccttatggat actgctttgg
     2941 attgccgcat tggtggcgac ggcgaccgcc gttgtcggcc cggtaagctt tttcgggctt
     3001 ctcgccgcct cgcttgccaa ccacttttcc ccgtccgtgc gccattccgt ccgcctgccg
     3061 atgacggttt gtgtcggcgg catcctcctg gtcggcggac aaaccgtatt cgaacacttc
     3121 ttgggcatga aggcggtatt aagcgtggtg gtcgaatttg cgggcggact cgttttcctc
     3181 tatctcgttt taaaacacaa aaaatgacgg atgccgtctg aacggcagcc tggctcgaaa
     3241 ggacaaacca tatgacgcaa gaacgtttcc catcattctt caaccaagcc ccgaccatca
     3301 ccgtcaggga cgcgcttgct gaattcctcg gcgcggccga aaatggcatc ctcacttacc
     3361 gctacgccga tgccgtgcgc ctgtgcggcc actcctgccc gaccgtcgcc ggcgcgtacc
     3421 tgatggttat caaaggtctg aaagcccttt acggcgaaga gctgcccgaa cgcggcggca
     3481 tcgaagccgc catgcaggga gcgcgcgacg aaggcacggt cggcgtaacc gcgtccgtcg
     3541 tccaactcct caccggcgca gccccggaaa ccggcttcgg aggcatcgga atgcagggac
     3601 gcttcgcccg ccgtaacctc ttatcctttg gtgcaggcga aatcaacggc acactgaccc
     3661 tgcgccgcaa agacaacggc aaaaccgtcg ccgtcagcct caacgccgcc ctacaaccct
     3721 ttgcacccga aatgcgcgaa cttatgccca aagccgtcgg cggcagcgca agcgcagaag
     3781 aactcgaacg cttcggacaa ctctggcagg cacgcgttaa agcatttttg accgaatcgg
     3841 cggacgaccc gcagttcgtc atcgtccgcg aagtgtgagc gttcagacgg cattccgaat
     3901 ttcaaatgcc gtctgaaccc ccgccaaaca acaacaaacc tacgcccgac aagcatccgc
     3961 catgattacc atccgcaacg tcagctaccg catcggcaca cgccccatcc tcgacaacgt
     4021 cagcctcgac atccccgaag gcggcattac cgccctcgtc ggccccaacg gtgcgggcaa
     4081 atccaccctg ttttccttta tggcgcggct gcgcccgctt gaaagcggca gcatcgccta
     4141 ccgcggcaaa aaccttgcct gcacccccac cgccgaactc gccaaaaccc tgtccatcct
     4201 cacccaagaa aacagcatca tgagccgcat caccgtgcgc gacctgctca tgttcggccg
     4261 ctatccctac catcaaggca gaccgactgc cgaatgccgc cgtatcgtta acggtgcaat
     4321 cgaagaattc cacctgcaag acttcgccga ccgctacctg accgagcttt ccggcggaca
     4381 acgccaacgc gccatgattg ccatggtgtt ctgccagcgc accgactacg ttttgctgga
     4441 cgaaccgctg aacaacctcg acatgtatca tgcccgctcc ctcatgcaaa tcctgcgccg
     4501 gctgaccgac gaacacaagc gcaccaccgt cgtcgtatta cacgacatca accaggccgc
     4561 cgcctacgcc gaccacgtcg tcgccatgaa aaacggccaa gtcgccatgc agggcaagcc
     4621 cgacgacatt ttcaccgccg caaacatcaa aaccctgttc gatatggatg tgtccgtcct
     4681 cgaccaccaa agcaaaaaac tcatcgtcca ccatatctga agctcaaaaa gaaaatgccg
     4741 tctgaaaacc tttcagacgg catttccatt ccaaacgctc aaaccgccgc gtccgcacgt
     4801 tcgcccgtgc ggatacggat tgcctcctcg accggcagca caaaaatctt gccgtcgccg
     4861 atttttcccg aacgcgccac ctcgacaatc acgtcaatcg cgcgttccac agcatcatcc
     4921 gccaacacca gctcgatttt gactttgggc aggaaatcga cggcgtattc cgcaccgcga
     4981 tagatttccg tatgcccctt ctgcctgccg aaccctttga cctcgctgac ggtcatgccc
     5041 gtaatgccga tttccgtcaa cgcctcgcgc acgtcgtcga gtttgaacgg tttgacaatc
     5101 gcctcgattt ttttcatcac attctccatt aattaacgta aacaaacgac aaatatagca
     5161 gaaaccgccg gcaaacgata aacggtactg ttcgcccggc gatgcggcga tttgccggaa
     5221 accgtcattc ccgcgcaggc gggaatcccg atctctgcat ttcagcaata tttaaaggtt
     5281 tctgtaaatc caaacttcca tattcctaac cgtacggaaa cgacggcatt tgatctaaaa
     5341 acatacggaa gcagttgccc gcccctctac ttcctgcaat tatccgcata cccggctttg
     5401 ggtaaaaatc agaaaaacag ataaaaccct tattccttaa tatcttcaga cggcacctgt
     5461 attttcccca actgtatgcc gtctgaagat tgtcaacatt ttaagccaaa atatccaagc
     5521 aatacaaacc tgtccggcgt ataatccctc tttttcccaa ccgcatttga gagccgaatc
     5581 catgtctgtc gttttgccct tgcgcggcgt taccgccctt tccgatttcc gtgtcgaaaa
     5641 actcttgcaa aaagccgccg cactcggact gcccgaagtc aaattaagca gcgaattttg
     5701 gtatttcgcc ggcagcgaga aagcacttga tgccgcgact gtcgaaaaac tgcaagcctt
     5761 gttggcggcg caaagcgttg aacaaacgcc aaaagcgcgc gagggcttgc atttgttttt
     5821 ggtcacgccc cgtttgggta cgatttcgcc gtgggcttcc aaggcgacca atatcgcgga
     5881 aaactgcggt ttggcaggca tagagcgcat cgagcgcggt atggcggtgt ggctggaagg
     5941 cgcgcttacc gacaggcaaa aacaacaatg ggcggctttg ctgcacgacc gcatgaccga
     6001 atccgtattg cccgattttc agacggcatc caaattattc caccatctcg aatccgaaac
     6061 cttctccacc gtcgatgttt tgggcggcgg taaagaggct ttggtcaaag ccaataccga
     6121 aatgggtttg gcactctccg ccgacgaaat cgattatctg gttgaaaact atcaggcttt
     6181 gcagcgcaat ccgtccgatg tggagctgat gatgttcgcg caggcaaaca gcgaacactg
     6241 ccgccacaaa atcttcaacg ccgatttcat cctcaacggc gaaaaacaac cgaaatccct
     6301 gttcggcatg atacgcgaca cgcacaacgc gcatcccgaa ggtacggtcg tcgcctataa
     6361 agacaattcg tccgtgatcg aaggcgcgaa aatcgagcgt ttctatccga atgcggcgga
     6421 aaaccaaggc taccgtttcc acgaagaaga cacgcatatc atcatgaaag tggaaacgca
     6481 caaccacccg accgccatcg cgccgtttgc gggcgcggcg acgggtgcgg gcggcgaaat
     6541 ccgcgacgaa ggcgcgacgg gcaaaggttc gcgcccgaaa gcaggcttga ccggctttac
     6601 cgtctccaac ctcaacatcc ccgacctcaa acagccttgg gaacaagcct acggcaaacc
     6661 cgaccatatt gcttcccctt tagacatcat gatcgaaggc cccatcggtg gcgcggcgtt
     6721 caacaacgaa ttcggacgcc ccaacctctt gggctacttc cgcacctttg aagaaaaatt
     6781 tgacggtcag gttcgcggct accacaaacc gattatgatt gcgggcggct tgggcagcat
     6841 tcaggcgcag cagacgcata aagacgaaat ccccgaaggc gcgttgctga tccaactggg
     6901 cggcccgggt atgcttatcg gcttgggcgg cggcgcggct tcttcgatgg ataccggtac
     6961 aaacgacgct tctttagact tcaactccgt gcaacgcggc aaccccgaaa tcgaacgccg
     7021 cgcgcaggaa gtcatcgacc gctgctggca gctcggcgac aaaaacccga ttatctccat
     7081 ccacgacgtg ggcgcaggag gtttgtccaa cgccttcccc gaactcgtca acgatgccgg
     7141 acgcggcgcg gtattcaagt tgcgcgaagt gccgttggaa gaacacggtt taacgccttt
     7201 gcaaatctgg tgcaacgaat cgcaagagcg ttatgtgttg tcgattttgg aaaaagattt
     7261 ggatgccttc cgcgccatct gcgaacgcga acgctgcccg tttgccgtag tcggcacggc
     7321 gaccggcgac ggccatttga aagtacgcga cgatttgttc tccaacaacc ctgtcgattt
     7381 gccgttgaac gttttgctcg gcaaaccgcc caaaaccacg cgcaccgaca aaacggttac
     7441 gccgtatgcg accgaaggga atccctttgg gaaaaaaccg tttaatgccg gcgatatcga
     7501 cattaccgaa gccgcctacc gcgttctgcg cctgcctgcc gtagcggcta aaaacttcct
     7561 gattaccatc ggcgaccgca gcgtcggcgg catgacccac cgcgaccaaa tggtcggcaa
     7621 ataccaaacc cccgtagccg actgcgccgt gaccatgatg ggcttcaaca cctatcgcgg
     7681 cgaagcgatg tctatgggcg aaaaaccggc cgtcgccctg tttgacgcgc ctgcttcggg
     7741 cagaatgtgt atcggcgaag ccatcaccaa catcgcagcg gtcaacatcg gcgacatcgg
     7801 caatatcaaa ctttctgcca actggatggc ggcgtgcggc aacgaaggcg aagacgaaaa
     7861 actctaccgc accgtcgaag cggtttccaa agcctgtcag gcattggatt tgagcatccc
     7921 cgtgggcaaa gacagcctgt cgatgaaaac cgtttggcag gatggcgcgg acaagaaatc
     7981 cgtcgtctcg ccattgagcc tgattatctc cgcgttcgcg ccggtggaag acgtacgcaa
     8041 aaccgttacg cccgaactga aaaacgtcga agacagcgta ttgctgttta tcgatttggg
     8101 cttcggcaaa gcgcgtatgg gcggctcggc gtttggtcag gtgtacaaca atatgagcgg
     8161 cgacgcgccc gatttggacg atacaagtcg tctgaaagcg ttttacaacg tgattcagca
     8221 gcttgtcgcc gaagacaaac tcttggcgta tcacgaccgc agcgacggcg gtttgtttgc
     8281 cgttttggta gaaatggcgt ttgcggggcg gtgcggcttg gatatagatt taaatttatt
     8341 gcttgcacaa acatttatta ccaaccatac cgctctgtct caatcattgc ggactgaaga
     8401 ggtaaaagcg ttggctgaat ggcaagaaac cattgcccgc acattattta atgaagagtt
     8461 gggtgctgtt atccaagtta gaaaacaaga tgttgccgat attatcaatt tattctatca
     8521 acaacagctg catcataatg tctttgaaat cggtacgtta actgatgaga acacgttaat
     8581 catccgcgac gggcaaacgc accttatttc tgacaaccta atcaaactgc aacaaacctg
     8641 gcaagaaacc agccatcaaa tccaacgcct gcgcgacaac cctgcctgcg ccgacagcga
     8701 gtttgccctg attggcgaca acgaacgcag cgcattgttt gccgacgtga agttcgacgt
     8761 gaacgaagac atcgccgcgc cgtttatcaa cagcggcgcg aaacccaaaa tcgccatcct
     8821 gcgcgaacag ggcgtaaacg ggcaaatcga aatggccgcc gcgttcactc gcgccggttt
     8881 cgatgcctac gacgtgcata tgtccgacct gatggcaggc cgcttccgcc ttgccgactt
     8941 caaaatgctg gcggcgtgcg gcggcttcag ctacggcgac gtactcggcg cgggcgaagg
     9001 ctgggcgaaa tccatcctgt tccaccctgc cttgcgcgac caatttgccg ccttctttgc
     9061 cgatccggac acgctgacat tgggcgtgtg caacggctgc cagatggtca gcaacctcgc
     9121 cgagattatc ccgggtgcag aggcatggcc taaattcaaa cgcaacctga gcgaacagtt
     9181 tgaagcacgc ctgagcatgg ttcacgttcc gaaatcagcg tcgctgattc tgaacgaaat
     9241 gcaaggctcc agcctgcctg tcgtggtcag ccacggcgaa ggccgcgccg acttcgcgct
     9301 tcacggcggc aatatttccg ccgatttggg catcgcgctg caatatgtgg acggtcaaaa
     9361 ccaggttacc caaacctatc cgctcaaccc caacggctcg ccgcaaggca tcgccggcat
     9421 taccaacgcc gacggccgcg tgaccatcat gatgccccac cccgaacgcg tgtaccgcgc
     9481 cgcgcaaatg agctggaaac cggaaggctg gacggaactg tccggctggt accgcctctt
     9541 tgccggcgca cgtaaagcct tgggctaacc gccctactca aaccaatgcc gtctgaagaa
     9601 tatttcagac ggcgttccgg cataccatcc tttaaacggt atccgtccac cgaggaacac
     9661 tcatgaaaat cacccccgtc aaagccctaa ccgacaacta catctggatg atacagcacg
     9721 gcaaccatgc cgtctgcgtc gacccttccg aaccctcgcc cgtcttagaa ttcctcgtcc
     9781 gcaaccgcct catgcttgcc caaacatggg taactcaccc ccaccccgac cacgagggcg
     9841 gtgcggcggc actctggcgc ggctacatgg aatcgcccgt ttacggcgaa tccgacatcg
     9901 aagcagcaac ccacaccgta accgccggca cccaattcac cttcggcgac ggacaggtta
     9961 ccgtttgggc aacacccggc cacacagacc gccacaccag ctaccttctc gaaacttcag
    10021 acggcataca cgtcttttgc ggcgacaccc ttttttccgc cggctgcgga cgcgtgttta
    10081 ccggcacaat cgaacagctt tacgacagct tccaacgctt caaccgcctg cctgaaaaca
    10141 ccctgttcta cccggcacac gaatacaccg ccgccaacct gcgtttcgcc gcccatatcg
    10201 agccggacaa cgccgacatt cagacggcac tgaaagcggc ggcgcatacg cctaccctgc
    10261 ccgttaccct cgcgcacgaa cgccgcgtca atccgttttt gcgcgtcgac ctgccgcacg
    10321 tcagagaccg cgccgaggca ttgagcggga aaacgttaaa cagcagcctc gatacctttg
    10381 tcgcgctgcg tgaacttaaa aaccaatacc ggacgaaata aaacaatggg aaaacgcagc
    10441 cattcctagg atttttatta aaatcttaaa taaaatcata caatcatcgc caatagacga
    10501 aaggacaccg ttgccttata atcaaacaaa aacaaaatat ataatatagt ggattgaatt
    10561 taaatcagga caaggcgacg aagccgcaga tagtacggca aggcgaggca acgctgtact
    10621 ggtttttgtt aatccactat attgttaatc cactatataa atccagcaca aaacgggatc
    10681 ggtgattctt gtccgcaaga atcgttgatt ttctctatta cacggataat catcatgcgc
    10741 ttcacacaca ccaccccatt ttgttccgta ttgtccaccc tcggtctttt tgccgtttcc
    10801 cctgcttact catccattgt ccgcaacgat gtcgattacc aatattttcg cgactttgcc
    10861 gaaaataaag gcgcgttcgc cgtaggtgca agcaatattt ccatccaaga caagcaaggc
    10921 aaaatattag gcagggttct caacggcatc cccatgcccg acttccgagt cagcaaccgg
    10981 caaaccgcca tcgccaccct gattcacccc caatacgtca acagtgtcaa acacaacgtc
    11041 ggctacggtt ccatacaatt cggcaacgac acccaaaatc cagaagaaca agcctatacc
    11101 taccgcctcg tatcacgcaa cccgcacccg gactacgact accaccttcc ccgcctcaac
    11161 aaactggtta ccgaaatctc acctgccgca ctcagcagcg tacccttgct tggaaacggc
    11221 cagccaaagg ccaatgccta cctcgatacc gaccgcttcc catactttgt acgactcggc
    11281 tcaggcacgc aacaagtccg caaagcagac ggcacgcgta cacgaaccgc cccggcatac
    11341 caatacctga ccggcggcac gccgctgaaa gtattggggt tccaaaacca cggcttactc
    11401 gtcggcggca gcctgaccga ccaacccctt aacacctacg caatcgccgg agacagcggt
    11461 tcccccctgt ttgccttcga caagcatgaa aaccgctggg tgcttgcggg cgtactcagc
    11521 acctacgccg gcttcgataa cttcttcaac aaatacatcg tcacgcaacc cgaattcatc
    11581 cgttccacca tccgccaata cgaaacccgg ctggatgtcg ggctgaccac caacgaactc
    11641 atatggcgcg acaacggtaa tggcgacagc accctgcaag ggctcaacga acgcatcacc
    11701 ctgcccattg caaacccttc gcttgcccca caaaacgaca gcaggcacat gccgtctgaa
    11761 gatgccggca aaacgctcat cctatccagc aggttcgaca acaaaacact gatgctggca
    11821 gacaatatca accaaggcgc aggcgcattg cagttcgaca gcaacttcac cgtcgtcggt
    11881 aaaaaccaca catggcaagg tgcaggcgtt atcgtagccg acggcaaacg cgtcttctgg
    11941 caagtcagca accccaaagg cgaccggctc tccaaactgg gcgcaggcac gcttatcgcc
    12001 aacggacaag gcatcaacca gggcgacatc agcatcgggg aaggcactgt cgtactcgcc
    12061 caaaaagctg cttcagacgg cagcaaacaa gcattcaacc aagtcggcat caccagcggc
    12121 aggggcacgg ccgtcctcgc cgacagccag caaatcaaac ccgaaaacct ctatttcggc
    12181 ttcaggggcg gacggctcga cctcaacggc aacaaccttg cctttaccca tatccgccat
    12241 gcggacggcg gcgcgcaaat cgtcaatcac aaccctgacc aagccgcgac actgacgctg
    12301 accggcaacc ccgtcctcag tcccgagcat gtcgagtggg tgcaatgggg caaccgtccg
    12361 caaggcaacg cggcggttta cgaatacatc aacccgcacc gcaaccgtcg gaccgactac
    12421 ttcatactca aacccggcgg caacccgcgc gaatttttcc cgttaaatat ggaaaactca
    12481 acaagctggc aatttatcgg caacaacagg caacaggccg ccaaacaagt cgcccaagcc
    12541 gaaaatgccc gccccgacct aattaccttc ggcggatact tgggtgagaa cgcgcaaacg
    12601 ggcaaagccg caccgagtta cagcaaaacc aatatcgaat gggtgaatgg tccaaacacc
    12661 ccacacaagc cctcgcccta tacgaatacg ccaacccgca caggggcagg cgtaccgacg
    12721 attaccgcct caaagaaggc ggcaaccccg gcgcctactt cccatggaat gcctacagca
    12781 cccaagactg ggaatttctc ggacatgacc ggcgaagcag ccatagaaaa aacccgccat
    12841 atcgcaaatg ccgccgtata cggccggccc gaataccgtt acaacggcgc actcaacctg
    12901 cactatcgtc ccaaacgcac cgacagcacg ctgttgctca acggcggcat gaaccttaac
    12961 ggggaagtct tgattgaggg cggcaatatg attgtgtcag gcaggcccgt accccatgcc
    13021 tacgaccacc aggccaaacg cgaacccgtt cttgaaaacg aatggaccga cggcagcttc
    13081 aaggctgcac ggttcaccct gcgaaaccat gcccgactga cggcagggcg caataccgcg
    13141 catctggacg gcgacataac cgcatacgat ctgtccggca tcgacctcgg ctttatccaa
    13201 ggcaaaacac cggaatgcta ccgctcctac catagcggca gcacccactg cacacccaac
    13261 gccgttttaa aagccgaaaa ctatcgtgca ctacctgcaa cgcaagtacg cggcgacatt
    13321 acccttaacg accgttcaga gctccgcctg ggcaaagcac acctgtacgg cagcatccgt
    13381 gccggcaaag acaccgcagt ccgcatggaa gcagacagca actggacact ttcccagtcc
    13441 agccacaccg gcgcactgac gcttgacggc gcacaaatta ccctgaaccc cgatttcgcc
    13501 aataatacac acaacaaccg cttcaacaca ctgaccgtca acggcacact tgacgggttc
    13561 ggcacattcc gattcctgac cggcatcgtc cgaaaacaaa atgccccccc cctcaaactg
    13621 gaaggggaca gccgcggcgc attccaaatc cacgtcaaaa acaccggaca agaacctcaa
    13681 acaaccgaat cgcttgcact tgtgagcctc aatccgaaac acagccacca agcccgattc
    13741 accctccaaa acggctatgc cgatttgggt gcctaccgct acatcctccg caaaaacaac
    13801 aacggataca gcctgtacaa cccgctcaaa gaggccgaac ttcaaattga agccacgcgt
    13861 gcggaacatg agcgcaacca acaggcatac aaccaattac aggcaaccga catcagcaga
    13921 caggttcaac atgactctga cgcgaccagg caggcactac aggcctggca gaacagtcaa
    13981 accgaacttg cccgcatcga cagccaagtc caatatctgt ccgcccaatt gaaacagaca
    14041 gacccgctga ccggcattct gacgcgtgcc caaaacctgt gtgccgcaca aggatacagt
    14101 gtcgatatct gccgtcaggt tgccaaagcc gccgacacga acgacctgac actcttcgaa
    14161 accgaactgg atacgtatat agaacgtgta gaaatggccg aatccgaact tgacaaagca
    14221 cggcaaggcg gcgatgcgca agccgtcgaa acagcccggc acgcctacct gaacgcactc
    14281 aaccgtctgt cccgacaaat ccacagtttg aaaaccggcg ttgccggcat ccgtatgccg
    14341 aacctggccg aactgatcag ccggtcggcc aacaccgccg tttccgaaca ggccgcctac
    14401 aataccggcc ggcaacaggc gggacgccgc atcgaccgcc accttaccga tccgcagcag
    14461 caaaacatct ggctggaaac cggtacgcaa caaaccgact accatagcgg cacacaccgt
    14521 ccctaccaac aaactaccaa ctatgcacat atcagcatcc aaaccggcat caccgaccgt
    14581 ctcagtgtcg gtacaatttt aaccgatgag cgcacaaaca accgttttga tgaaggcgta
    14641 tccgcccgaa accgcagcaa cggcgcacat ctgttcgtca aaggggaaaa cggcgcactc
    14701 tttgccgcgg cagatttagg ctacagcaac agccgtaccc gatttaccga ttatgacggg
    14761 gctgccgtcc gccgccacgc atgggatgca ggcatcaaca ccggcatcaa aatcgatacc
    14821 ggcatcaacc tcagacccta tgccggcatc cgtataaacc gcagcaacgg caaccggtac
    14881 gtactcgacg gcgcagagat aaacagcccg gcgcaaatcc aaaccacatg gcatgccggc
    14941 atccgtctcg ataaaaccgt cgaactgggt caagccaagc tgacccccgc cttcagcagc
    15001 gattactacg atacccgcca aaacagcggt tccgccctca gcgtcaacga ccgtacctta
    15061 ctgcagcaag ccgcccacgg cacactgcat accctgcaaa tcgacgccgg atacaaaggc
    15121 tggaacgcca aacttcatgc cgcttacggc aaagacagca acaccgcccg ccacaaacaa
    15181 gcaggaatca aaataggcta caactggtaa caagccgata aaaatgccgt ctggaacccg
    15241 cgtttcagac ggcatttgcg ttaaaaatag taaaccgttc caaaagggag tagaatagtg
    15301 ccgtttccaa ccctgcgcct gtaccgtcag gcttttatta tggaccttcc cagttcgttt
    15361 ttactgaacg ccccttccga ttccaaacga caataaccat cccgccggaa tgcctccccg
    15421 cacacggcgg gcggagcatt tatgagcatc gaaccaaccc ctccgaacct tgaaaacgac
    15481 ggtatcgaaa acgatgtaga acgcgtttcc gccgatttcg accgtgtcca ctccctctgc
    15541 gaaattctcg aacctgcttt tgaacaaatc gaaaacggca caccgcttga agacgcgccg
    15601 ctgcgcgaca agctgaccga gctgaccgtt ctcttgagcg agctgcaccc tgccgacgtg
    15661 gcggcggtat tggaatcgct accgccgcgc gaacgcaata tcgtctggat tctggtcaaa
    15721 ccggaagacg acggcgaagt attgctggaa gtatccgacg cggtgcgcga aacgctgatc
    15781 gagtcgatgg acaaagacga attgttggca gcggtcgatg atttggacgc ggacgaattg
    15841 gcggaactgg cagacgattt gccgcaccaa gtggtttacg aagcgctaca aacccgcgat
    15901 gaggaagaac gcgcccaagt caaagcggca atgtcctacg aagacaacca agtcggtgcg
    15961 attatggact tcgagttggt cagcatccgc gccgatgtcg cctgtgaagt ggtgctgcgc
    16021 tatctgcgcc gcttcgacag cctgcccgac cataccgaca agatttttgt ggtcgatgaa
    16081 aacgacgtac tgcaaggcgt gctgcccatc cgcaaacttt tggtcgccga tcccgaagat
    16141 ttggtggaaa acgtgatggc gaaagatgtc gtgcgtttcc gcgccgaaga cgacgtggaa
    16201 gaagcggcgc aggcgtttga acgctacgac ttggtaactg cgccggttgt cgatgaaaac
    16261 aaaaagctca tcggtaggat taccgttgac gagatggtgg acgtcatccg tgaagaatcc
    16321 gaagcggata tgttgaacat ggcaggtttg caggaagagg aagacctgtt cgcccccgtc
    16381 ttggattccg tcaaaaaccg ctggatgtgg ctcgccgtca acctctgcac cgccttcctc
    16441 gccagccgcg tcatcggcgc gtttgaaggc agtatcgaaa aaatcgttgc actcgccgcg
    16501 ctgatgccca tcgtcgccgg tatcggcggc aactcgggca accagacgat taccatgatt
    16561 gtccgcgcca tggcgatggg gcagttgacg ggaatgcagg cggggcgctt gttgaaaaaa
    16621 gaagtcggcg ttgccctagt caacggcatt atctggggaa ccgtcatggg cgcggtttca
    16681 tggctgctct acggcagcct cggcatcggg ctggttatga ttgccgcgat gacgctcaac
    16741 ctcctgctgg cggcaaccgt cggcgtatta attcccgtgg taatggaaaa gttcggacgc
    16801 gatcccgcac tgggcagctc ggtgctgatt accgccgtta ccgactccgg cggcttcctg
    16861 attttcttgg ggctcgccac cctattcctg ctttaaatgc cgtctgaacc cgcgcaaaaa
    16921 tgccgtctga agcggaagct gcttcagacg gcatttgact atttatcctt gttgcacaag
    16981 attattggac ggtatgccgg ggcagccctt tggcaacgcc gaccacatcc tccccgaaca
    17041 gcgcgttgac atcggtttcg tcaaacacat atttgctgtg gcagaaatcg caatcgactt
    17101 cgatgctgcc ttgttccgcc accacgccgc cgacttcttc cccgcccagc atcaacagca
    17161 tatcgctgac tttgccgcgc gaacaggtgc atgaaaattc aaacgtttcc ggctcgaaca
    17221 cgcgcggcgg cgtttcgtgg aacaggcggt ataaaacgtg ttgcgcatcc aattctgcca
    17281 gctcctccgc cgtcagcgtg cgcgccagcg tactgacgtg ttcccatgcc tcttcatcca
    17341 acacctcttc aggcagacgc tgcaccagca gaccgcccgc cgcttcatcg cttgcagaca
    17401 ggacgatgtg cgtatcaagc tgttcggaac gtttcatata gttcatcaac atttgcgcga
    17461 taccgtcgcc ttccaaaggc actacgccct gccagggttc gccgtctttg ggctgcagcg
    17521 tcaatacgaa cacgccgttg ccgcccaaaa ggtcgccgag gctttcgtca tcggctattt
    17581 ctgccgcctc gtcccaccgc gcggtcgcac ggacggtacg gtcggaagtc gcttccgcaa
    17641 ccagcatttt cagccgcccc tgcccctgaa cctgcacaat cagcgtgcct tcgtttttga
    17701 ggttgcccga cagcagaaca ccggcagcca acagctcgcc caaggcgcgg cggatggcgg
    17761 cgggatagtt tttctgtttt acaatgtgct gccacacgtt ttccagacgg acgtgcagcc
    17821 cgcgcacggg catatcgtcg aagataaagc gggtacgcac atcggcgcgg ttgatggcgg
    17881 tttgattcat gattttctct gactgattgt tcggatggcg gctatatggt tgcggtcggc
    17941 gcgaaaacaa gacggacggc ggatgcgctt cccaaattat caataaatta tataaaaatc
    18001 aacatattaa ctcaatctaa caagccgttt tttgccaaac agccgttttt ttatatacaa
    18061 tcaacaagat attttcgact gatacagcat aacatcgcac ggcggcacga tgcctcctgc
    18121 gcggaaacac cgatatggat tcttttttca aaccggcagt ttgggcggtt ttgtggctga
    18181 tgtttgccgt ccgccccgcc cttgccgacg agttgaccaa cctgctcagc agccgcgagc
    18241 agattctcag acagtttgcc gaagacgaac agcccgtttt acccatcaac cgagcccccg
    18301 cccggcgggc gggcaatgcc gacgaactca tcggcagcgc gatggggctt aacgaacagc
    18361 ccgttttacc cgtcaaccga gtccccgccc ggcgggcggg caatgccgac gaactcatcg
    18421 gcaacgcgat ggggcttaac gaacagcccg ttttacccgt caaccgagcc cccgcccggc
    18481 gggcgggcaa tgccgacgaa ctcatcggca acgcgatggg acttttgggt attgcctacc
    18541 gctacggcgg cacatcggtt tctaccggtt ttgactgcag cggcttcatg cagcacatct
    18601 tcaaacgcgc catgggcatc aacctgccgc gcacgtcggc agaacaggca cggatgggta
    18661 cgccggttgc ccgaagcgaa ttgcagcccg gagatatggt gtttttccgc acgctcggcg
    18721 gcagccgcat ttcccatgtc ggactttata tcggcaacaa ccgcttcatc cacgcgccgc
    18781 gcacggggaa aaatatcgaa atcaccagcc tgagccacaa atattggagc ggcaaatacg
    18841 cgttcgcccg ccgggtcaag aaaaacgacc cgtcccgctt tctgaactga tttcccaagg
    18901 aatacgcaat gagtatgccc gaaataccca aatggtacga cgatgacgga cagatcgtgt
    18961 cctgtaccga aaagatcaaa gtgatgtccg aaaatatggc cgagctgtat cagacggcac
    19021 aagacgcgtt tgaagacgcg ctgctgatgg gttgcggcga acgtcagttg cgcgattacc
    19081 tgctcgcgct gattgaaggt ttggaaaatc cctaccgcaa agtctgaaca cgccccggtt
    19141 gctgcggcac ggtttatccg tgccgttttt gcgtttgtgc gcggcttcgg cttttcagac
    19201 ggcatatttg acgttatgat taaacagtta acaagattta tcacaacgcc gtcaaaagac
    19261 agacacacaa catgaacatc atccgcgcgc tcctcatcat cctcggctgc ctcgccgccg
    19321 gcgaaaccgc cgttttccta gcaggcatca aactgcccgg cagcatcgtc ggcatgggcg
    19381 tgctgtttgc gcttttgcag gcgggttggg tcaaaacgtc ttggctgcaa cagcttaccg
    19441 acgcgctgat ggcgaatctg acgctgtttc tcgtgccgcc ctgcgtggcg gtcatcagct
    19501 atttggattt gattgccgac gattggtttt cgatactggt ttccgcctcc gccagcactt
    19561 tgtgcgtact gctggttaca ggcaaggttc accgctggat acggagcatt atctgatgaa
    19621 cgaaatcctc aggcagccca gcgttctgct tttcctcacg cttgccgtgt acgcgcttgc
    19681 gattatcgtg cgcacgcgca cgggcaatat cttctgcaac cccgtactcg tcagcactat
    19741 cgtgctgatt gcctacctga aaatcctcga catcgattat gcggtgtacc acaacgccgc
    19801 gcagtttatc gatttctggc tcaagcccgc cgtcgtcgtg cttgccgtgc cgctctacca
    19861 aaaccgccgt aaaatcttca accaatggct gcccgtcatc gtttcacagc ttgcgggcag
    19921 cgttacgggc attgttacgg ggatgtattt tgccaaatgg ctgggcgcgg aacgcgaagt
    19981 cgtcctctcg ctcgcgtcca aatctgttac caaccccatc gccattgaaa ttacccgctc
    20041 catcggcggc attcccgcca ttaccgccgc caccgtcatc attgccggtc tggtcggaca
    20101 gattgccggt tacaaaatgc tgaagaacac agtcgtcatg ccctcgtccg tgggtatgtc
    20161 gctcggcacg gcttcgcacg cgatgggcat tgccgcctcg ctcgaacgca gccgccgcat
    20221 ggcggcatac gcggggctgg ggctgacgtt caacggcgta ctgaccgcgc tgattgcgcc
    20281 gctgcttatc cccgttttgg ggttctgaac ccgtttcaga cggcatttca gcccatgctg
    20341 tctgaacgcc gacacactcg caaggagaac cgttatggct gtcaacctga ctgaaaaaac
    20401 cgccgaacaa ctgcccgaca tcgacggcat tgccctctac accgcccaag caggcgtgaa
    20461 gaagcccggg cataccgacc tgacactgat tgccgtagcc gccggcagca ccgtcggtgc
    20521 agtcttcacg accaaccgtt tctgtgccgc gcccgtccac atcgccaaat cgcacctttt
    20581 cgacgaagac ggcgtgcgcg ccctcatcat caacacgggc aacgccaacg cgggtacggg
    20641 cgcacagggc agaatcgatg ctttggcagt gtgtgccgcc gccgcccggc aaatcggctg
    20701 caaaccgaac caagtgctgc ccttctccac cggcgtgatt ctcgaaccgc tgcccgcaga
    20761 caaaatcatc gccgcgctgc ccaaaatgca gcctgccttc tggaacgaag cggcacgcgc
    20821 catcatgacc accgacaccg tgcccaaagc cgcctcgcgc gaaggcaagg tcggcgacaa
    20881 acacaccgtc cgcgccacgg gcatcgccaa aggctcgggc atgattcatc ccaatatggc
    20941 gaccatgctc agtttcatcg ccaccgatgc caaagtttcc caacccgtcc tccaactgat
    21001 gacgcaggaa atcgccgacg aaaccttcaa caccatcacc gttgacggcg acaccagcac
    21061 caacgacagc ttcgtcatca tcgccaccgg caaaaacagc caaagcgaaa tcgacaacat
    21121 cgccgacccg cgttacgccc aactcaaaga attgttgtgc agcctcgcgc tcgaactcgc
    21181 ccaagccatc gtccgcgacg gcgaaggtgc gaccaagttc atcaccgtcc gcgtcgaaaa
    21241 cgccaaaacc cgcgacgaag cccgccaagc cgcctacgcc gtggcacgtt cgccgctggt
    21301 caaaaccgcc tttttcgcct ccgaccccaa cctcggcagg ctgctcgccg ccatcggtta
    21361 tgccggcgtt gccgacctcg ataccgacct cgtagaaatg tatctcgacg atattttggt
    21421 tgccgaacac ggtggacgcg ccgcaagcta caccgaagca caagggcagg cggtgatgtc
    21481 gaaggccgaa atcaccgtcc gcatcaagct gcatcgcgga caagccgccg ccaccgtcta
    21541 tacctgcgac ctgtcgcacg gatacgtttc catcaacgcc gactaccgtt cctgacccga
    21601 cacggcttca gacggcatac ataaaatgcc gtctgaaccg ccggacaaca taccatgacc
    21661 tccacattcc cccgccgcct cgcccgcaaa atccgccaaa cccgccgcct gtcgcgcaaa
    21721 agcatcgcct ttctgttcct tttggcaggt tcggcactcg tcgccctgac cgcgctgttt
    21781 tttgcccatc ttgccgattt tgcgctggaa ctgaacgcca aactggttca acaatacccg
    21841 tggttcgcgt gggtcgcgct tcctttgggt ttgccgctta ttgcgtggct cacacgcaaa
    21901 ttcgccccct tcaccgccgg cagcggcatc ccgcaggtca tcgcctcact gtcgctgccc
    21961 tacggcgcac agaaaacgcg gctgatccgc ctcgggcaga cgctgctgaa gattccgctg
    22021 acctttttgg gtatgctgtt cggcgcgtcc atcggacgcg aaggtccgtc cgtgcaggtc
    22081 ggcgcggcag tgatgggcgc gtggggcgcg tggtgcaaga aacacggctt ggcattcaaa
    22141 gggatgcagg aaaacgattt gatggcggcg ggcgcggcgg gcggtttggc agccgcgttc
    22201 aacgcgccgc tggcgggcgt gattttcgcc attgaggaac tcgggcgcgg catcatgttg
    22261 cgctgggaga ggcaaattct tttgggcgtg ctcgcctccg gtttcataca ggtcgccatt
    22321 cagggcaaca acccgtattt ttccggcttc aacggcggcg tattggaaca tatctttctg
    22381 tgggtcgcac tgtccggcct ggtttgcggc gcggcgggcg ggctgttcgg acgtttgctc
    22441 tatcgcggtg cggcggcatt tgcaccacgc aagatacgcg gcttcatccg caaccgtccg
    22501 ctgctgctgg cggcactgat ggggctgctg ctcgccctgc tcggcacgtt ctaccaaggc
    22561 aaaacctacg gcaccggcta ccacgaagcc gcccaagccc tgcacggcat ctatgaagcc
    22621 cccttcggac tcgccgccgc caaatggctc gccaccgtat tcagctattg ggcaggcgtt
    22681 ccgggcggca ttttcactcc ctcgctgacc ataggcgcgg ttttgggcga gcatatcgcc
    22741 gccatcgccg acatatcgca gggtgcaaac atcatcgtcc tcatctgcat ggcggcattt
    22801 ctggcgggcg cgacacaatc cccgattact tccgccgtcg tcgtcatgga aatgacgggc
    22861 ggacaaagcc tgctgttttg gatgctaatt gcctgcattt tcgcctcgca ggtttcgcgc
    22921 cagttttcgc cgcgtccgtt ctaccacgca tcgggaatgc gcttccgcca gcgcgtgctt
    22981 caggaaacca ccgcccaaac cggcaatgcg cccgcaagac cgcaaacagc aaacagcaaa
    23041 acgggaatgc cgtctgaaaa ttaaaacgcc cccgatcaaa cgccggcagc cgccttgatt
    23101 tgaataccgt tccgccgccg cttgaaattt cagcaacaat gccgtctgaa cgacagaatg
    23161 cggttttcag acggcatttc cacatcccga tattgcctaa acaaaaccga agcgtttgct
    23221 ataattctat tttttaccgc acacgcacca atcatgtttc ccgatttctc ccaaaccctc
    23281 tccaaagacc gccacttcct acgttccgcc ttcaaaaatc ccaacaaata cggcgggttg
    23341 tccaaagtcg aagaaaaata ccgaaaatcg cacgaaatct ttttgaaacg tttggcagcc
    23401 ttgcccaaac ccgaattcga caacaccctg cccgttcacg aaaaacttga cgaaatcaaa
    23461 aaaaccgttg ccgaacatca ggtaacgatt atttgcggcg aaaccggttc gggcaagacc
    23521 actcagttgc ccaagatttg tctggaactc gggcgcgggg cggcgggttt gatcgggcat
    23581 acccagccgc gccgtttggc ggcgcgttcc gtagcagagc ggattgccga agagctgaaa
    23641 tccgaaatcg gcagcgcggt cggctataaa gtgcgcttca ccgaccacac ctcgcgcgat
    23701 gcctgcgtca agctgatgac cgacggcatc ctgctggcgg aaacccagac cgaccgttat
    23761 ctcgccgcct acgacacgat tatcatcgac gaagcgcacg agcgcagcct gaacatcgac
    23821 ttccttttgg gctatttgaa acaactcctg ccgcgccgcc ccgatttgaa agtcatcatc
    23881 acctcggcaa cgatagacgc agaacgcttt tcccaacact tcaacggcgc gcccgtgctg
    23941 gaagtgagcg gacgcaccta tcccgtcgaa atcctctacc gaccgctgat cggcaaagac
    24001 gaagacgacg cggaaataga attgaccgac gcgattgtcg atgcggcgga cgaattggcg
    24061 cgatatggcg aaggcgatat tttggtattc ctgccgggcg aacgcgaaat ccgcgaagcc
    24121 gccgaagccc tgcgcaaatc cacgctacgc cgcaacgacg aaatcctgcc cctgttcgca
    24181 cgcctgtcgc acgccgagca gcacaaaatc tttcacccct ccggagcgaa acgccgcatc
    24241 gtgctggcaa ccaacgtcgc cgaaacctcg cttaccgtgc cgggcatcaa atacgtcatc
    24301 gacaccggcc tcgcgcgcgt caaacgctat tccgcacggg cgaaagtgga gcagcttcat
    24361 atcgaaaaaa tctcccaagc cgccgcccgc caacgctccg gccgctgcgg acgcgtctcc
    24421 gcaggcgtat gtatccgatt gttttcagaa gaaaatttca acaaccgccc cgaatttacc
    24481 gaccccgaaa tcgcccgcag caacctcgcc gccgtcatcc tgcgcatggc atcgctgaaa
    24541 ctcggcgacg tagcggcatt cccattttta gaaatgcccg attcgaggta tattaatgat
    24601 gggtttcagg tgttgctgga attaggggca gtggaggccg cctgaaaaca agtaggatat
    24661 acacttctac ctgacaaaga ccaacaaacg ataaaactac ggcacatcta gatgcccaac
    24721 ctacaacatt gcacacggta aaaacatgaa acacttactc atcgattttg aaaacgtcca
    24781 gccgcaaaac ttagacaaat tactaaccga aaatacccat atttggctat ttataggtgt
    24841 attacacaaa atgttaccta ttagtctggt gcaatcccta ctacgtttcg gcgaacgtgt
    24901 ccatcttgtc cagttacaaa aaacggggaa aaacgcattg gatttttacc tgtcctatta
    24961 cctcggacaa attaccgcca cagaccccaa tgcccaaatc ggcatactct cgcgtgatgg
    25021 aggatacgat gttctggtcg aacatatttt gaaaaaccac caggcgaagg gtatcgtgcg
    25081 cctagccaat atagatgaag tacaacatca gaaaattact accgaaccgc cgtcagcatt
    25141 gctggaaaac actcctcagc ctgaaaccac cctcaaacca cagcaaccat taacttccta
    25201 tttccaagca gccctaactg cactgcgccg ccccgacgct ttccgcccct gccgcctgca
    25261 taacctgcga caaaatctgc gtaagcatat tttgagtgat ttgtttaaag aaaaaaccga
    25321 tgaagaatgc gaaataacca ctgctaacgt tatcaataaa ctcaaagcac aaaacttcat
    25381 cagcattgat gaacaggaaa ccgtttccta ccatctcagt gataatgatt tgttacaaag
    25441 aatccaacgc catattttaa gccaacgtcc caaaacctac gctgattttc aagccgtcgt
    25501 gcaaaaccga gcagatgcac ttcacttaac agtcggtacc aacgacattc aatcctttgc
    25561 gcgacatttg cgcgaccaaa acctgatccg ccaaaacaat gggaaaattg aatatgcacc
    25621 gtttactgaa cctaaaccac agccaacgcc caagcagcct aaaaaaaccg catgggaacc
    25681 tgatgaaatt atttggaaaa aagtgattgc cgcgttatcg ttaaagaacc gtcctaataa
    25741 aaccaaaact ttacgcaata caatccaggc actcacaaaa tccaatgcac aagaaactga
    25801 caaactgcta caacatttac aagataccca agtcctacgt attgacggta ctaaaattgt
    25861 gtatatcaag taggatgggc atttatgcct gacctacaaa accaaaaaca acctaacacc
    25921 cttaatcaac tccacaaacc cttttcagac aacctcgttt tttgaaaaac aatctgtaaa
    25981 cagataactg ctgaagaata ccgttgccga gccccaaaac ctgcctgcaa cttttattgt
    26041 gaactgccca ttatgaaaaa atcccttttc gttctctttc tctattcatc tctacttacc
    26101 gccagcgaaa tcgcctatcg ctttgtattc ggaattgaaa ccttaccggc tgcaaaaatg
    26161 gcagaaacgt ttgcgctgac atttgtgatt gctgcgctgt atctgtttgc gcgttataaa
    26221 acttcgcggc tgctgattgc gctgtttttc gcgttcagca ttattgccaa caatgtacat
    26281 tatgcggttt atcaaagttg gatgacgggt attaactatt ggctgatgct gaaagaggtt
    26341 accgaagtcg gcagtgcggg cgcgtcgatg ttggataagt tgtggctgcc tgcgttgtgg
    26401 ggcgtggcgg aagtcgtgct gttttgtagc cttgccaagt tccgccataa gacgcatttt
    26461 tctgccgata tattgtttgc cttcctaatg ctgatgattt tcgtgcgttc gttcgacacg
    26521 aaacaagagc acggtatttc gcccaaaccg acatacagcc gcatcaaagc caattatttc
    26581 agcttcggtt attttgtcgg acgcgtgttg ccgtatcagt tgtttgattt aagcaagatt
    26641 cctgtgttca aacagcctgc tccaagcaga atcgggcaag gcagtattca aaatatcgtc
    26701 ctgattatgg gcgaaagcga aagcgcggcg catttgaaat tgtttggcta cgggcgcgaa
    26761 acttcgccgt ttttaacccg gctttcgcaa gccgatttta agccgattgt gaaacaaagt
    26821 tattccgcag gctttatgac ggcagtatcc ctgcccagtt tctttaacgt cataccgcat
    26881 gccaacggct tggaacaaat cagcggcggc gataccaata tgttccgcct cgccaaagag
    26941 cagggctatg aaacgtattt ttacagcgct caggctgaaa accaaatggc aattttgaac
    27001 ttaatcggta agaaatggat agaccatctg attcagccga cgcagcttgg ctacggcaac
    27061 ggcgacaata tgcccgatga gaagctgctg ccgctgttcg acaaaatcaa tttgcagcag
    27121 ggcaggcatt ttatcgtgtt gcaccaacgc ggttcgcacg ccccatacgg cgcattgttg
    27181 cagcctcaag ataaagtatt cggcgaagcc gatattgtgg ataagtacga caacaccatc
    27241 cacaaaaccg accaaatgat tcaaaccgta ttcgagcagc tgcaaaagca gcctgacggc
    27301 aactggctgt ttgcctatac ctccgatcat ggccagtatg ttcgccaaga tatctacaat
    27361 caaggcacgg tgcagcccga cagctatctc gtgccgctag tgttgtacag cccggataag
    27421 gccgtgcaac aggctgccaa ccaggctttt gcaccttgcg agattgcctt ccatcagcag
    27481 ctttcaacgt tcctgattca cacgttgggc tacgatatgc cggtttcagg ttgtcgcgaa
    27541 ggctcggtaa cgggcaacct gattacgggt gatgcaggca gcttgaacat tcgcgacggc
    27601 aaggcggaat atgtttatcc gcaatgagtg gcgtaaaaac caataaagac aaattaagat
    27661 gatgtcgggg aagatgcccg accgacaaga ctatgcaaaa tatgaaaaac caagtacgcg
    27721 gatcaggcat ggatgcacga tccaatccgg ccaatgtttc agacggcctg caaaacagtt
    27781 cgagccatat cggtaccaac acgcgctacc gcctgaccaa gctcggcgaa caaatggcgc
    27841 gcctgcccat cgacccgaaa atcgcgcgca ttttgctggc ggcgaagaaa cacgactgta
    27901 tggcggaaat attggtgatt gcgtccgcgc tgtcgattca agacccgcgc gagcggccgt
    27961 tggaagcgcg cgatgctgcc tccaaggcac acgaacgttt taccgacaag cagtccgatt
    28021 tccttgccta tctgaacatt tgggacagct tccagcgtga gcgcgacaaa ggtttgtcca
    28081 acaagcagct ggtgcagtgg tgccgccaat atttcttgtc gcacctgcgg atgcgcgaat
    28141 ggcgcgagct acaccaccag cttgcccaaa ctgcgattga aatgggtttg accaccaaag
    28201 aagccgcttt cagacgttct cccgaagtca ggcagctcac gtcgtctgaa aatgcaggcg
    28261 accaagacct atccgccaaa ctcaaacaaa aacaactgga taagaaacaa caccgcgccc
    28321 aaatccgcgc tgccaaagaa gcgggctacg aacaaatcca ccgcgccctg ctcaccggcc
    28381 tcatcgccaa cgtcggcatg aaatcacccg acggcaacga ctacaccagc acgcgcggca
    28441 gccgcttcca ccttttcccc gcctccgccc tgttcaaggc gaagcccaaa tgggtgatgg
    28501 cggcagaact cgttgaaacg acaaaacttt atgcccgcga cgtagccgcc atccagcccg
    28561 aatggatcga gcaggaagcg ccgcacctcg tccgctacca ctatttcgag ccgcattggg
    28621 aacaaaaacg cggcgaagtc atcgccagcg aacgggtaac gctctacggc ctgaccgtcc
    28681 tgccgcgccg ccccgtgtcc tacggcagaa tcgcccccga agaagcgcgc gaaatcttta
    28741 tccgcggcgc attggtggca caggaatgcg atttgaaagc ggactttttt gtccacaaca
    28801 aaaagctgat taaagaaatt accgaactcg aacacaaatc gcgcaagcaa gacgtgctgg
    28861 tcgatgacga agccctgttt gcgttttata acgaacgact gcccgaaatg gcttggaaag
    28921 acgcgcaagg cagcgtttgg ggaagtgaag attccgtacg gattattgaa tctgacaaag
    28981 ccgagaggtc gtctgaaaat gagcgcaacg agtttcgtaa aaacaagcgt aatgggtctc
    29041 gccaaaatga aaatcacggc aacaccgtag gttgggttga aaacccaaca tcagccgcaa
    29101 ctgcaaaaac tgttgggttt gacaacccaa cctacgctac tcagcaaccc accccctccc
    29161 ccgagaggga gggtcgggga gagggcaaaa cagttgccgc acaaaccaac ttttccgcaa
    29221 ccgcagcaaa ccctctcccg caggagaggg aacagagtgc ctcagcttca acgttttcag
    29281 acgacctgcg tcctgcaaat ctgcagcaaa ccgccccctc ccccgtgggg gagggctggg
    29341 gagagagcaa aacagttgcc acccaaacca acttttccgc aacctcaaca ctttcagacg
    29401 accccaaacc caaaaagcag cctgcacctc aaaaaggccg tctgaaaccc ctacccctcg
    29461 ccgacatccg caccttccaa gcctggctca aaaccgccga gtgcgacaat ccgcgcctgc
    29521 tgttcctcag ccgcgacgat ctgatgcaac acgccgccgc acacattacc gaagaacagt
    29581 tccccaaatt ctggcaaacc gcagacggca aattcaaact ttcctaccgc ttcgagccgc
    29641 accatccgct agacggcgtg accatgaccg tgccgctgac cgtcctcaac cgcctgcacg
    29701 cgccatcgct cgaatggctg gtgcccggta tgttgcgcga aaaaatccag ctgctgatta
    29761 aagcactgcc gaagcaaatc cgccgcattt gtgtgcccgt acccgatttc atcaccaaat
    29821 tcctcgaaag caatcccgac cgccaagcga ccatcattcc ccagttggcg cactttatcg
    29881 ccaaaagcgc cagcgatatg cggattctcg agcaaatcga ccaagacgca tgggcggcgc
    29941 aagaattgcc cgaacactgc tatctgaatc tgcgcattat cgacgacggc ggacaagagc
    30001 ttgccggcgg ccgcaaactg cacgaattgc aacaacagct cggccaagcc gccgccgtca
    30061 ccttccgcga caacacccaa gaattcgagc gcgacaacgt taccacatgg gacatcggaa
    30121 ccctgcccga atccatcaaa ttcgcccgcg gcaaacaaca gctcaccggc tacctcggcc
    30181 tgcaaaaaga aaaagacggc cgcatcgccc tgcgcctgtt tgacaccacc gaagccgccg
    30241 aacaggcaca ccgtcaaggc gtcatcgaat tgatgaagct gcaattaaaa gagcaggtaa
    30301 aagacctgaa caaaggcatc caaggcttca cccaagccgc catgctgctc aaacacatca
    30361 acgccgacac cctgcgcgac gacctcaccc aagccgtctg cgaccgcgcc tttatcggcg
    30421 aagacgagct gccgcgcaac gaaaaagcct tcaaagaaca aatcaaacgc gcccgtagcc
    30481 gcctgcccgc cgtcaaagaa gccctcagcc gctacctgca ggaaaccgca gccgcctacg
    30541 ccgaactcaa cggcaaactc ggcaaacatc cattgaccca cctcctaaga ctacgcctgc
    30601 aaaccctgct tgcccccggc ttcgccaccc gcaccccgtg ggcacaatgg ccgcgcctcc
    30661 ccatctacct caaagccatg accctgcgcc tcgaaaaata cagcagcaac cccgcccgcg
    30721 acgcagcccg cgaagccgat atacaggaat tggaacaaat gtggcaggaa aaaaacgacg
    30781 gtttggtgaa acaaggacaa cccatttcag acaacctagc cgcgtttaaa tggatgattg
    30841 aagaattgag agtgtcactg ttcgcacagg aattgaagac accgtatcca gtgtcggtga
    30901 agaggttgtt aaaagagtgg gagaaaattt tttaactgaa taattctgcc gatcaaaatt
    30961 tcttgacaaa acaaatttta atgaatacta taagtagcat tatgagttta gaaaattttc
    31021 aattaataaa aacacaatta ggtgttccca gttatgaaaa tgatagagtt gcaatctatc
    31081 aaggagattg tatccagtta atggataaga tttcaaaagg atcattccaa atgacaatca
    31141 catctccacc atacaatatt ggtaaagaat atgagtctat tttagatttg gaacattatc
    31201 ttgagtggtg tgaaagatgg atgcaatcaa tacatcactt aactgaagat agcggatgtt
    31261 tttggttaaa tttaggatac ttacatgttg aaaaaaaggg actagcagtt cctattcctt
    31321 atcttttatg ggataaaact aactttttcc ttttacaaga ggtggtttgg aattatgcag
    31381 ctggagttgc atgccgtaat cgattttccc caagaaatga aaagttatta tggtatgtga
    31441 aaaatcctgc taaatataca ttcaatttag atgctgtacg cgatcccaac gttaaatatc
    31501 caaatcagaa aaaaaatggg aaattaaaat gtaatcctct aggaaaaaac ccaacggatg
    31561 tttggcaaat agcaaaagtc acttctggaa gaaataggtc atcgagagaa agaactgctc
    31621 atcctgccca atttccattg gaattaatag aaagaataat ccgagcaagt agcaatcaaa
    31681 atgatgtaat cttagatcca tttatcggct caggaacaac cgccttagcc ggactaaaaa
    31741 acaaccgttt tgtcatagga tttgaaatta acgatgagta tatagatatt ataaaagaac
    31801 gcttcaaaga gtatgatctt caaaatactt gatacttgta tataacggta tagaggatag
    31861 accctcctct atactgtatt tacaatattt atttttgata aagtattttt agtttacttc
    31921 tataagcctc tggagagagc ctcgcctgct ggcctgtcgc tgcagtttga gcaatccaat
    31981 ccgtatgatc taaccaacca aatctgataa ttttaatttc tggacgcaat tttaaatcag
    32041 gcataaattt ttcaaaattt atagttagat aataaccatt tttactctta ccagtaattc
    32101 catcttgtgg ttgtgcataa ctcctattac caaatatata ttttggatcc gatgaagttt
    32161 ttaattctat tgagtaatag tcgtctttaa tatatacaat atctttgtca tatttattct
    32221 tttctccttg ccaattttca aatctagcct caatattagc aggaattaaa gcatgtaata
    32281 acgcccctac aatctgagga gaaggaaaaa aatttttgcc aatttgcaaa ttaccaattc
    32341 tagacgagaa aatattttcc caactatcta aacaaagttg gacaatctct ttttctgaca
    32401 atggatgctg cttaatcagc tcttctgttt tggaaatcca taactcctca ttcaaagaag
    32461 catacggcga tatttttgat ctattcatat tatttaatcc cttctacaag ttcagaaata
    32521 ttaattgaaa aagacttagc taacagcgag atattcaaaa gacttatatt tctttctccg
    32581 cgttcaactg atccaatata agtacgatgt aatccaactt tttctgctaa ttcttcttgt
    32641 gaccaaccat taagtaaacg ataatgtttt acacgcttac caaactcaac taattcattt
    32701 tccataatct gtattatttt aataagtgaa tactttaagt ctacactcta taagtagcac
    32761 acttaacaaa ccatatccta ctgcgtgaat accatagcaa actgtagcct gcatcaaacc
    32821 gcgtgcatgc cttcgggcac acactcggtc tttctaaacc actccccctt tccacccaaa
    32881 ccaaaggtcg tctgaaaccc attttcagac gaccttttgc cactttgcaa agcaagtatt
    32941 cccaccaccc tctccccaaa tatcgcccaa accagtaaac ttcccatatt tcaacaactt
    33001 cttgaaagcc aaccatgtcc ggtatctacc taccccacct atttccgccc catatcgccg
    33061 aacgcggcct tttgtatttt cagcagggca aggttcgcga tgtccgaaaa acttccgccg
    33121 ggcgttatcg ggcctagcgc tgtttgctgc cggcggtctg aataatggtg gcgtcaacga
    33181 cggcagcgga tgctttctct acttttaggt ttttttcggt cagttggcgg ttaatcagtt
    33241 tgagcaattc ggacagggtg tcgtcttgcg ccagccagtt gcggtaacgg cataaggtgc
    33301 tgtaatcggg gatgctcagt tcgtcaaagc ggcaaaacag gttgaagtcg atgcgggtga
    33361 tgaggctgtg ctcgagttcg ggatcggaga ggctgtgcca ttgtccgagc agaacggctt
    33421 tgaacatgga caacagcggg taggcgggac gaccgcggtg gtctcggagg taacgggttt
    33481 tttgacggtt caggtattgt tcgatcggtt gccaatcaat cacctggtcc aacttcaata
    33541 gtgggaaacg gtcgatgtgt ttggcaatca tggcttgggc ggtttgctga aagaaggtgc
    33601 tcatgagaaa tctcctaaat gtcttggtgg gaatttaggg gattttgggg agttttgcaa
    33661 aggtctcagt ctttttaaac cacagccctt cccaactaaa ccaaaaggtc gtctgaaccc
    33721 tattttcaga cgaccttttg ccactttgta aaacaaatct tcccaccatc ctctccccaa
    33781 acatcgcccg aaccagtaaa cttctcatat ttcaacaact tcttggaagc aaaccatgcc
    33841 ccatatccac ccgctccacc tgttcccgcc ccatatcgcc gaacgcggac tgctctattt
    33901 tcagcagggc aaagttggtg ctgtccaaaa aacttccacc gggcgttatc gggcggaggt
    33961 atgcggtttg gaaaactatt gggtatggct gaagctggat agtgatttgt atattaaaga
    34021 cgaaagctgc gattgccctt atgtctaaag gtgcaaacat accttaaatt actatattac
    34081 ataggcaaaa tacaagccta taacgaattg gaaacaaaat gccgtctgaa agcattataa
    34141 aatctgttca ccttttcaga tgagtaatgt acacccctat acaatttttg ctactatacc
    34201 ccataaatcc acggctaaag atatccttat tatgtcctat gatttatcga aacgacttgt
    34261 aatcggctta gcatcaagtg ccctattcga cttatccgaa tcggataata tatttagaat
    34321 ggaaggggca gaaacctata ggcaatatca gagagaaaaa caaaaccatc ccctaaaaaa
    34381 ggcgttgtct ttccatttat taaaaaactt ctgtcaatca atgaaataaa cccaaacgac
    34441 ccaacaattg ggtttattct tttatccaga aacaatccag atacagatta cgagtcataa
    34501 ctataggctt aatattacac gattctcatt ccatcaaggc ggaaaaccgc acaaatactg
    34561 aaacactatc gatcgatttg taaacaagcc tacttaagta acttgcagtc cttatcattt
    34621 cctttaaaat aatccagccc gtcactacac gaactggcgg acttcttgca aataaaggtt
    34681 actagatttt cattcatctt aataataaaa ggatttttat ctttatctat ggctaccgcc
    34741 ttcaacatga atttactgtc taaggccccg cgcgcgattc cattcaaacg gatacaaaag
    34801 ccttctgcct ctttaatcgg caaacttggc catttggtag atgtttgttt aaatctccca
    34861 ttctgcagat aaaacttttc cataaaatgt gcattttcta acaaggctgc ccgcactgca
    34921 tttatctttg ctttctcaac ataattgcga tagctcggat aaacaattaa agcaagtaca
    34981 gacaatatca agaccactga tattaattca accagcgtaa acccccgatt atcagtcatt
    35041 actttacttc caataagaac agattattca acatatttct ttgaacagac ttactatccc
    35101 attcagcagt atgcatattt cccactctat tttttatccg cgggcagcac cggtttggct
    35161 gggccttt
//
LOCUS       DBBZXW010000008        33371 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.008, whole genome shotgun sequence.
ACCESSION   DBBZXW010000008 DBBZXW010000000
VERSION     DBBZXW010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 33371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.008"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..217
                     /locus_tag="ACJJD2_000381"
     CDS             <1..217
                     /locus_tag="ACJJD2_000381"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7578986.1"
                     /translation="DAMNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRL
                     TGWERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(387..1469)
                     /locus_tag="ACJJD2_000382"
                     /pseudo
     CDS             complement(387..1469)
                     /locus_tag="ACJJD2_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743106.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
     gene            complement(1912..2559)
                     /locus_tag="ACJJD2_000383"
     CDS             complement(1912..2559)
                     /locus_tag="ACJJD2_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HGG7578987.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(2556..2924)
                     /locus_tag="ACJJD2_000384"
     CDS             complement(2556..2924)
                     /locus_tag="ACJJD2_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HGG7578988.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(2934..3605)
                     /locus_tag="ACJJD2_000385"
     CDS             complement(2934..3605)
                     /locus_tag="ACJJD2_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HGG7578989.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(3770..4489)
                     /locus_tag="ACJJD2_000386"
     CDS             complement(3770..4489)
                     /locus_tag="ACJJD2_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7578990.1"
                     /translation="MATLSNKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            complement(4573..5886)
                     /gene="hpnE"
                     /locus_tag="ACJJD2_000387"
     CDS             complement(4573..5886)
                     /gene="hpnE"
                     /locus_tag="ACJJD2_000387"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HGG7578991.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALADLQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFAAAETCLQSLSDAV"
     gene            complement(5965..6837)
                     /gene="hpnD"
                     /locus_tag="ACJJD2_000388"
     CDS             complement(5965..6837)
                     /gene="hpnD"
                     /locus_tag="ACJJD2_000388"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HGG7578992.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCHRVAGVVGCLIARILGFSDSKTLEYADKMGLALQLT
                     NIIRDVGEDARNGRIYLPMEEMRRFDVPASVILQCRPTENFTELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            7008..8870
                     /gene="hscA"
                     /locus_tag="ACJJD2_000389"
     CDS             7008..8870
                     /gene="hscA"
                     /locus_tag="ACJJD2_000389"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HGG7578993.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVKQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVA
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVHAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAEELQQI
                     RQGIADLQGRLKDGKAEDIRAAAAKLGSITDNFAAKRMNRNIQRALTGQSVDNI"
     gene            8947..9603
                     /locus_tag="ACJJD2_000390"
     CDS             8947..9603
                     /locus_tag="ACJJD2_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7578994.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISEVSNFEGRMRHLENNGYANVA
                     GLERILAVKTDNYKEKENLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKN
                     ETAESEFEKSVHERRQEGNAESGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSK
                     IRLFKEAYFRKNGRRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAESRKPR
                     "
     gene            9639..10400
                     /locus_tag="ACJJD2_000391"
     CDS             9639..10400
                     /locus_tag="ACJJD2_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HGG7578995.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFEYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            10455..10796
                     /gene="fdx"
                     /locus_tag="ACJJD2_000392"
     CDS             10455..10796
                     /gene="fdx"
                     /locus_tag="ACJJD2_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HGG7578996.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(11083..11670)
                     /locus_tag="ACJJD2_000393"
     CDS             complement(11083..11670)
                     /locus_tag="ACJJD2_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HGG7578997.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            11883..12080
                     /gene="iscX"
                     /locus_tag="ACJJD2_000394"
     CDS             11883..12080
                     /gene="iscX"
                     /locus_tag="ACJJD2_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HGG7578998.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(12148..12549)
                     /locus_tag="ACJJD2_000395"
     CDS             complement(12148..12549)
                     /locus_tag="ACJJD2_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG7578999.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            12760..13719
                     /locus_tag="ACJJD2_000396"
     CDS             12760..13719
                     /locus_tag="ACJJD2_000396"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HGG7579000.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQVSQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            13787..15097
                     /gene="tilS"
                     /locus_tag="ACJJD2_000397"
     CDS             13787..15097
                     /gene="tilS"
                     /locus_tag="ACJJD2_000397"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HGG7579001.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPTVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEIIGQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPMP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQISVSDGILPVHPDFPILF"
     gene            15171..15956
                     /locus_tag="ACJJD2_000398"
     CDS             15171..15956
                     /locus_tag="ACJJD2_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HGG7579002.1"
                     /translation="MRHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEGKMPSEEIRRLRAVVPEGRIFSVSDGILKKISSLSCADDILALIDI
                     PLGGTLPDKGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLARYKGRVFATALREEKQAVLYGEDLCGPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            15966..16106
                     /locus_tag="ACJJD2_000399"
     CDS             15966..16106
                     /locus_tag="ACJJD2_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579003.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LI"
     gene            16091..16243
                     /locus_tag="ACJJD2_000400"
     CDS             16091..16243
                     /locus_tag="ACJJD2_000400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579004.1"
                     /translation="METHLIVQYRGGGGFGLGVVEMVLTDIAQNRANGIRTNKEFGKK
                     FVKSKN"
     gene            16425..16778
                     /locus_tag="ACJJD2_000401"
     CDS             16425..16778
                     /locus_tag="ACJJD2_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579005.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            16790..17095
                     /locus_tag="ACJJD2_000402"
     CDS             16790..17095
                     /locus_tag="ACJJD2_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579006.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPKGNAQKDGSDAGIRPH"
     gene            17157..18533
                     /gene="mpl"
                     /locus_tag="ACJJD2_000403"
     CDS             17157..18533
                     /gene="mpl"
                     /locus_tag="ACJJD2_000403"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HGG7579007.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTVVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIICNGQQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     TAGRVKWDLMGRHNRMNALAVIAAARHVGVGIQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIEGLRQRVGNARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNAEAGDHILVMSNGGFGGIH
                     GKLLDALR"
     gene            18740..19792
                     /gene="bioB"
                     /locus_tag="ACJJD2_000404"
     CDS             18740..19792
                     /gene="bioB"
                     /locus_tag="ACJJD2_000404"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HGG7579008.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRQHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKVDY"
     gene            complement(19870..20505)
                     /locus_tag="ACJJD2_000405"
     CDS             complement(19870..20505)
                     /locus_tag="ACJJD2_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HGG7579009.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRYGFVSFAPNLAAVKLNDYAKV
                     RKLITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGPHVTRAVELYRDRFISYSGGNFATYGAINTSGISGIAPIFKIITDKQGRFVS
                     GNIIPITQVGDKIPKIDPEKTVIGRIIYLNRSDFPKGNGLDVSPDGSITRR"
     gene            complement(20629..20868)
                     /locus_tag="ACJJD2_000406"
     CDS             complement(20629..20868)
                     /locus_tag="ACJJD2_000406"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579010.1"
                     /translation="MGVCTFFRRTAFVKQRAFEVADGNVRVLQGRFDVFQNIGIGQVI
                     DRIIAAEHNVAHADNGNGIGCLFVSRILSVHIAGI"
     gene            20855..21088
                     /locus_tag="ACJJD2_000407"
     CDS             20855..21088
                     /locus_tag="ACJJD2_000407"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HGG7579011.1"
                     /translation="MQTPKICYAFRTPSAYGQYLADAGFDYLSFANNHSNDFGAQGIT
                     ATAAGGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(21151..23010)
                     /gene="ilvD"
                     /locus_tag="ACJJD2_000408"
     CDS             complement(21151..23010)
                     /gene="ilvD"
                     /locus_tag="ACJJD2_000408"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HGG7579012.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(23183..24952)
                     /gene="cysI"
                     /locus_tag="ACJJD2_000409"
     CDS             complement(23183..24952)
                     /gene="cysI"
                     /locus_tag="ACJJD2_000409"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HGG7579013.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGGGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIDELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVE
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(24979..26793)
                     /locus_tag="ACJJD2_000410"
     CDS             complement(24979..26793)
                     /locus_tag="ACJJD2_000410"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HGG7579014.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPTAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDKRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQATPPADLQTASEGRYCKAAPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDQATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYASFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFAADFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(26790..28076)
                     /locus_tag="ACJJD2_000411"
     CDS             complement(26790..28076)
                     /locus_tag="ACJJD2_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HGG7579015.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSNGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ENLPGADETGRSAADFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(28115..29038)
                     /gene="cysD"
                     /locus_tag="ACJJD2_000412"
     CDS             complement(28115..29038)
                     /gene="cysD"
                     /locus_tag="ACJJD2_000412"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HGG7579016.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWNPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(29076..29816)
                     /locus_tag="ACJJD2_000413"
     CDS             complement(29076..29816)
                     /locus_tag="ACJJD2_000413"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HGG7579017.1"
                     /translation="METTLLKPALWQIPHIGSGSETALAEKTETLKQRLHRIAGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRF
                     QPIREDALHYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(29827..31278)
                     /gene="cysG"
                     /locus_tag="ACJJD2_000414"
     CDS             complement(29827..31278)
                     /gene="cysG"
                     /locus_tag="ACJJD2_000414"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HGG7579018.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKDKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGD
                     RTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAA
                     VGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALI
                     AERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLH
                     EKLAWFGENGEGENRVGQAYPALGGLNAGQRAA"
     gene            complement(31728..32384)
                     /locus_tag="ACJJD2_000415"
     CDS             complement(31728..32384)
                     /locus_tag="ACJJD2_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HGG7579019.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALAAAAILLLS
                     "
     gene            32449..33339
                     /locus_tag="ACJJD2_000416"
     CDS             32449..33339
                     /locus_tag="ACJJD2_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HGG7579020.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLTKRQG
                     INAWMVGCGLGTDKAAVGTLAGILAEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITKSM"
BASE COUNT         7239 a         8704 c         9655 g         7773 t
ORIGIN      
        1 ggacgcgatg aactacttcg gcatggtaga gtttctgcgc ctgatggcaa tggtgcggcc
       61 gccatttgtc ttcttctccg gcacccgcag cgaactgcct acttatcttg acctcgtggc
      121 agaactgcgc ctgaccggat gggagcgttt tgcaggcagc caaaccttga ctgtgagcag
      181 cacatcaaca gcaattcaag ctacgacgac cacctgattt ataagttctg accgcaagta
      241 gcgtactact tttaaaggca taagataatc cccgtttaac agaccattaa acggggataa
      301 atttgtgcaa aagctaatac aatttcctac gcttcggcgg tgcaaaagct gccgccaatt
      361 cgtgcaaaag ctgccgccgc cttacattcc agtgcaatgc cgtctgaaac ttcgctaatc
      421 tcgggttgcc gcgcgctgtg ttgttcttcg gtactcagca aaaagccgta cagacgctcc
      481 aatcgggcgc ggtaggcggt gaatttgttg tagaacatcc ggaaaaaaga tagcgcgttt
      541 tgcagtcgcg caaaggcttg gacggtctgc tggatgtcgc cgattttgat ttgtccggca
      601 aacaggcgcg gcgcttgcaa aataatgggg aagagtttga tgccgttggt gaacatatcg
      661 ttaaagccgc ttaagcagac gctttgccgc gcgatgcgcc aacggttgcg gataatggct
      721 ttaaagcggt cggaaagccg gccgtgttcg tgttgttcgc cgttgtaaaa cgctacgctt
      781 tcggcgtggt cgcgtacgcg gatgagggaa taacggtagt cgccgttgag tttttcgttt
      841 tcatagttgt aacgaatcaa ggggttgcct atccacatcg cgataaaggt cgccaaaatc
      901 acaaaaataa agacgagcca aacaatgccg cgcggaatgt cgaagccgaa cacggtcagg
      961 atgccagcca agccccacaa aacaacggca aattccaaag aggtaacgac cgaattgacc
     1021 atgccgcgta caaattcgat ggtcgaagcg atgaaatcct gcgcgtcctg ttggatacgt
     1081 tggtcgatgt tgtccggcgc gtggcggcgc atttgcaggc ggtagtagtt tttgtcggca
     1141 agccagcgcg tcgtcagcac ttcattgagc tgctccgacc atttaatcgc caagccttga
     1201 tcgaggaagt cgttgacgac attgttaaac gcccgtatca gcaccacgcc cgcgttcatc
     1261 gcggcaaaca tccaaaacgc ggaggcgttc aaatcctgca tcgagtcgta aagtcctttg
     1321 gacataaagg tactcaacac attcagccgt acttcggtca acagcagcgt aaccattacc
     1381 gtaatcagca gcaagacttt gaccgtgctt ttcggtgtca ggcaaagcca aagcggtgtg
     1441 gaataaagct cggtttgcca tttctgcatg ggaaatttct tacggtatca atgccgtctg
     1501 aaaaagacgg gtacagttga ttttttgatg aagtttgggg aagttttgcc ggtcagggta
     1561 cattgcgtgt taatttatag tggattaaat ttaaaccagt acagcgttgc ctcgccttag
     1621 ctcaaagaga acgattctct aaggtgctga agcaccaagt gagtcggttc cgtactattt
     1681 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat accatacaac
     1741 cacgccggaa ttaagtttaa atttgaataa aaggttcggg ttctgcaaaa tacagaaccc
     1801 gaaccttgtt cggatattga aaccggccgc ccgattttgg gcggtgcggc ttgcaagtat
     1861 caagattcgc atatgccgtc tgaagctcgg agaggttcag acggcatatg cttatttggg
     1921 ctgctcttcg acgaatctcg gacctttcaa gatgccgttg tgagaatagg gcgacagcag
     1981 gttgtatgcg gcggttttgg aaacctgata accgcggtcg gtcaggctgt tggcaatctg
     2041 attgaccact gcgctgacca aagcccccaa caggccgctg ttgctgttgt tgctgccttc
     2101 gcggatgctg gccgaacccg accacaactc ttttccgttg cgggaatcga ccagccgtgc
     2161 tttggcggat acggtcgtca cgctgtctaa aatttgatat gaagtgccgt attcggtaac
     2221 cgtaatgtac aaaaccgcat cattgccgaa aatctgatgc agtttttccg gccggacggc
     2281 gtgaatatcg gcggcattgg tcaagccgtt ttgtttgaag gtttcctcca cgactgcggc
     2341 ggggaagacg taatagccgg cttcggaaag cggcgcggcg gtcgaagcca gtacacccca
     2401 tgttccgttg acatcgggcg attcgttcag cggcggaacc accaaaattg aagccggttt
     2461 gctttccttg aatgacgtgt agtcgaaatc gggcgctttt tgaacttggc aggcagacag
     2521 cgccaacacg gcggcaagcc ctaaaatcaa aggtttcatc gcttgcctcc tttaccggtt
     2581 ttcatcagga agtccataaa tacgcccgat tcgggaaaca gccttttctc ttcttcaaac
     2641 tggcggaacg cgccctcttt gtctcccgaa cgggaaagca gcagtcccag atgggcgtgc
     2701 gcacccgggg cggcattcat ttttttgttg ccggcttcca caaagtattt ttccatcttt
     2761 tcggtctgct tgcccaacga agtgtcgtcg tttttcaaac cttcatagac ggtatcggga
     2821 tagccgccgt aataatacag ggatttttgc ccgttgccgc cgcaggcggt cagagccaag
     2881 accgccgcac acagcgacaa acggctcaag gttttcggat tcatcatttc tccttaacgg
     2941 ttgggttgcc atgcgccgtt gtcaacagcc tgaaccaggc tgttgacggc ttcgcggatt
     3001 gccaagtcta aaactttgcc gttcaaagtc gcatcgtagc cggaagtgcc gccgaaaccg
     3061 atgatttcac ggttggaaag tgcgtattcg cccgcgccct gtgcggaata gacgatttcg
     3121 gaagtattga cgttgacgat attcagagcc acttttgcat aggcgatttg cgatttgccg
     3181 cgacccaaaa tgccgaagag ctgatgatcg ccgacatctc tgcgtccgaa ttcggttaca
     3241 tcgccggtaa cgacataatc tgcgcctttc aggttatgcg ctttgccgga aatgccggat
     3301 tcctgtttta atgcgttcaa attggtgcgg ttcagtacgt tgaagcggtt ggtctgttgc
     3361 aggtgcgtta ctagaatggt ttttgcctgg ctgcccaaac ggtcttcccc gtcggagaaa
     3421 atgccttttt ggaagctgga gcggttgtcg aatgttccga cggaaatcgg ggtacgaaca
     3481 ccgtgatatt gcgtattgta ggaggcgact ttctctacct cgagactgcg tgaggattcg
     3541 gtcgcacagc cggtcagtga aacggcagcg gcggcaagga caacggcggt ggaaacggtt
     3601 ttcataaaat ttaccctaag gtcaagttaa ggaaataacg ggttatcatt attgtcctta
     3661 tgtaaattta agtcaaggtg tttgtctgtg cgggacggat gcgcgcggaa ggtacggata
     3721 tttttcaaac ggaatcgcgg cgcgggcggg atgcctgcct tttccggatt tagaggtaaa
     3781 cgatttcgcc gcttcgccct ttgctttcgg tacttgccca ccagacaaat gcgggcagca
     3841 cgtccccgta gcttttgcgt tcgcttttgg cttcgcccgg atgggatttg atgcgttgcg
     3901 gggaattgat gggtccgggg acgaggacgt tggcgcgcag gttgccgaag cgttcccatt
     3961 cgtcggcggc gactttgcac aggtagttca acgcggcttt ggacgcgccg aagccgcccc
     4021 agtaggcttt gggtgtttcg ccgtggcttt cgccgacgaa gatgacggac gcgtcgggcg
     4081 actgcttcag cagcgggaac agggcgcggg tcagccccat aggtgcgacg gtgttgatgc
     4141 ggtattggtt gacccattcg gcgacggttt ggaaatccag cggcgagagg gcgtaaaaat
     4201 agccggcgca gtggacgatg ccgtccagtt tgccttgcgt ggcttcggca atggtggcgg
     4261 cgaactgatt gaattctttt tcttccgcac tcatcaggtc gaaacggatg gcgaagggtt
     4321 cggggtgtcc ggcttcgaca atcgcgtcat agactttttc cagttttttc tgatggcgtg
     4381 ccaccagaat cacggttgcg cctgccgccg cataggcttt ggcgacctgt tcgcccagac
     4441 cttgcgatgc gccggtaact aagatggttt tgttggacag tgtcgccata ctttttcctt
     4501 tttggtggtc ggtcgggggt attttagcgt tttgccgcac cttgtaaagc gtcccgatac
     4561 cagccggcgt tttcagacgg catcgctcag gctttgcagg caggtttccg ccgccgcgaa
     4621 acctgattgt acggcggctt cgagcgtggc ggggtagtct gggtggaggt agtcgccggc
     4681 ggggaagatg cggtgccggt gcagccacga caaatccggc ggcggggcat cggctgcggt
     4741 tgtggcgcgt ttttcggtga tgacgcgcac ggcttcgggt tcgcccaaat gcggaaggat
     4801 gcgtttgagg tcggcgtgaa ctttgtccgc ccacgctcgg tttgtaaacg cgccgacgcg
     4861 gtcggaaacg ctgatgacgg cggacacttc gttttcaggc agtccgagcc tgccccggca
     4921 aagcagccat tgcaccgtgc cgtcggcaag gccggtcagc ggggcgggca ggcggacggg
     4981 ttcggcgtag cgcagataga cggtggtgat ggcgtggtag cgaaggtttt gatatgccgt
     5041 ctgaacgtgt tcgggcgtgc cttcgggcag gagcgcggcg gcgtggtagg gcgcggtggc
     5101 ggggacggcg gcatcgaaag cttcgccgtt gacgagcact ttcccgtccg ggagggtgtt
     5161 cagacggcat acgcgcgttt cgaggcggat gtccgcgccg agccgttgaa gatccgccaa
     5221 ggcgggttcg gcgacgattg cgcccaaatc ctgcttgggt aggagatagt cgctgccgga
     5281 ttttttcgtc agcacgccgt cggacaaaac gttgcacaac acgcgcaggc ttgcggtttc
     5341 caaaggcgtg ttgagcgcgc cccaaaccaa gggctgccaa aactgcatca cggcggcacg
     5401 cggcacgttc cgctgtttca gccattgcgc cactgtcgtg tcgggctgtc cgaggcgtgc
     5461 ggacttctgc aaatcggaca tatcggcaag cagtttggct ttgaatgcag tcggtgcacg
     5521 ccgggcaagc agcacgccgc ccaaaatatg cagcggcgcg ggcaggggga gggcgcggaa
     5581 ctgcaaaccg ccgtgcatat gccagtgcag cggtacgcgc aaaaaggcgg cacggggatc
     5641 cgaaccgatg gttttcatca ggcgcaacac gccccggtat gcgccgagca aaatgtgctg
     5701 cccgttgtcc aaaaaaccga aaccgtcggt atttccggcc agtgtgcgcg ccctgccgcc
     5761 cgcctgccgg ccggcttcaa acagggtaac gtcggcgtgc cgcgccaagg tgacggcggc
     5821 ggacagtcct gcccagcctg cgccgatgac ggcgattttc gggcgcggat gcggcgtgtt
     5881 catcatttat tcctccaatg gttgaaaccc cgtttttcgg ggcggcgggg gttgggtttt
     5941 cctgaagggc gggcggtatg cgccttatgc ccgttccggc gtgccggggc gcggtttgaa
     6001 tccgaataac caggttttca gggcaatgcg ttttttgcgc ggcgaaggga gggcgatttt
     6061 gtatttgagg acgttttgcg cgccgtctcg gtcgatttcg tttaaaagcg cgtaataaac
     6121 cgccgccata accagtccga ctttttgggc ttttttgtcg gcatcaggca gcagcgatac
     6181 ggcttcacgg taggtttcac gcgcacgctt tatttggaat gccatcaatt cggtgaaatt
     6241 ttctgtcggc cggcactgca aaatcacact tgcggggaca tcaaaccgcc gcatttcctc
     6301 catcggcagg taaatccgcc cattacgggc gtcttcgccg acatcgcgga tgatgttggt
     6361 cagttgcagc gcaagtccca ttttgtcggc gtattccagt gttttgctgt ctgaaaaccc
     6421 caaaatccgc gcaatcaggc agccgactac gcctgcgacg cggtggcaat acagtttcaa
     6481 ttcctcaaaa ctgccgtaac gcgcctgaac caaatccatc tgcatcccgt cgattaaggc
     6541 ttccagttca tatttcggca gcttgaaggt ttccttaact tgccgcaagg cctgattgac
     6601 ggggtgttcc ggcatcgcgc cgccgaatac cttgtccaaa tcgccgcgcc accagttcaa
     6661 tgttgcctgt gcaacatcgg ggttggaaca ttcgtcaacc acatcgtcca attcgcggca
     6721 aaaggcatat aaaatcgtta ccgcatcccg tttttcctga gtcaggaaac ggaagcccga
     6781 taaaaaactg gagcggcttt cttctgcttt ttgacggcaa tagtcgagtc ctttcacgat
     6841 ttatattcct aatgatgggc gggaaaggcg gattttatcg gcatttggcg gtagagggca
     6901 atttcggcgg cacgacccaa tccttagcgg tttgctcaac tatcggcgcg aattctgtta
     6961 aaatgccgct ttccttcctt tacacaccgc accgacaggc agaatttatg gctcttttgc
     7021 agatttcaga accgggtatg tccgccgccc cgcaccggca ccgtttggca gcaggcatcg
     7081 atttgggtac gaccaacagc ttggttgcca ccgtccgcag cggcagtgcc gcctgcctgc
     7141 ccgatgccga agggcgcgtt accctgcctt ccgtcgtccg ctatctggaa aacggcggca
     7201 ttgaagtcgg caaaaccgcc ctgtccgccc aaaaaaccga cccgctgaac accgtcagct
     7261 ccgccaaacg ccttatcggg cggacgcttg ccgatctgca tcaaaatacg cactacctgc
     7321 cttaccgttt cggcgacaat caacgcgtta tcgaattgca tacgcggcag ggggtgaaaa
     7381 cgcctgtcga agtgtcggcg gaaatcctca aaacccttaa atcgcgcgcc gaagaaacct
     7441 tgggcggcga tttggtcggc gtggtgatta ccgtccccgc ctatttcgac gatgcccaac
     7501 gccaggccac caaagatgcc gcgcggctgg cgggtttgaa cgtattgcgc ctgctcaacg
     7561 aacccaccgc cgccgcaatc gcctacgggc tggacaacgc ctcggaaggc acgtttgtcg
     7621 tgtacgactt agggggcggc acattcgacg tatccgtatt gcaactgacc aaaggactgt
     7681 ttgaagtcaa agccaccggc ggcaacagcg cgttgggcgg cgatgacttc gaccatcgtt
     7741 tgttctgcta cctgctcgaa caaaacggac tctcccaact caacgaacaa gacagccaac
     7801 tcctgctttc gctcgtccgc gccgccaaag aacaattaac cacgcaaacc gaagcgcgca
     7861 ttcaggcgac gctttcagac ggcatggcaa tcgacacaag catcagtcgc gccgagttcc
     7921 acaacctgac gcagcatttg gtgatgaaaa cgctcgaacc ggtcaaacag gcgttgaaag
     7981 atgccggtgt cggtaaaaac gaagtcaaag gcgtaattat ggtcggcggt tcgacccgta
     8041 tgctgcacgt ccagcaggca gtcgccacct ttttcgggca aaccccgctg aacaacctca
     8101 accccgacga agtcgtcgcg ctcggcgcag ccatacaggc gaacgtcctc gcaggcaaca
     8161 aagccgacgg cgaatggctg ctgctggacg ttacgccctt gtcgctcggt ttggaaacct
     8221 atggcggctt ggcggaaaaa atcatcccgc gcaattccac catccccacc gcgcgcgcgc
     8281 aggactttac caccttcaaa gacggtcaga ccgcgatgac gatacacgtc gtacaaggcg
     8341 aacgcgaact ggttgccgac tgccgcagcc ttgccaaatt caccctgcgc ggcattccgc
     8401 cgatggcggc gggtgcggcg cgtatccgcg taaccttcca aatcgatgcg gacgggctgc
     8461 tgtccgtttc cgcccaagaa caaagtaccg gcgtacacgc gcaaatcgaa gtcaaacctt
     8521 cctacggttt ggatgacggc gcgattaccc gaatgcttaa agacagtatg gacaacgccg
     8581 ccgaagatat ggcggcacgc gcccgcgccg aagccgtggt cgaagccgaa agcctgaccg
     8641 atgccgtcaa cgccgccctc gagttggaca gcgatttgct ggatgccgaa gaattgcaac
     8701 agattcggca aggtatcgcc gatttgcaag gccgtctgaa agacggaaaa gccgaagaca
     8761 tccgcgccgc cgccgccaaa ctcggcagca tcaccgacaa tttcgccgcc aaacgcatga
     8821 accgcaacat ccaacgtgcg ctgacaggcc agagtgtcga taatatttga tacttaaacg
     8881 gtttcagacg gcatagagat aacctgatgc cgtctgaagg ctcgaaaaca cttgaaaaac
     8941 atcgatatgg aaaagtcagg cattgtctat ctgatgaaaa ccgtcatcaa gggcgtatat
     9001 aaaatcggca tttcggaggt aagcaatttt gaaggcagaa tgcgccattt ggaaaacaac
     9061 ggctatgcga acgttgccgg attggagcgc atcctcgccg tcaaaaccga caattacaaa
     9121 gaaaaagaaa acctgctcca tgaaattttc agcaaaagca ggataggcga taccgaattg
     9181 ttcgccgtgg acgaaaacct tgtaaaacgt ttgtttttat cgcttcgcgg cgaaatcgtg
     9241 ttcccgaaaa acgaaacggc ggaatcggaa tttgaaaaaa gcgtccacga acgcaggcag
     9301 gaagggaatg ccgaatccgg ccgcaaacaa ctgcttgatt tggtacggcg cggacaccgg
     9361 gaataccctt acgcgctgcc ccggcttttg gcgggcgcgg catcctacaa gccgaaaaaa
     9421 tcgaaaatcc gcctttttaa agaagcatat ttccgcaaaa acggcaggag gctgacggac
     9481 gaaattgcag acggcatcca tatttacacc tgtttttcgc gggcggattt ggaaaaagcc
     9541 tattccgaat atttggaact tttcaaatcc gaatcggatg ccgaaagcag aaaaccacgg
     9601 taaggtgcaa acagataccg tacacgttga ggagcagtat gatgggcgat tccgtcattt
     9661 attatgtaga acaggcagac aaaccggtaa accgtgccgg cgaacgcgcc cgtaaaacat
     9721 tcgaatattt ttggcgcgag cttttttggg aacgccgccg catcattccc gccttagatt
     9781 ttgccatggt caaagcccct tttttccaag acggcgaaga cggcgaaatt tgcgaacata
     9841 tgtggatcga cgatatttat tttgacggtc tttacattta tggcgtgctg aacaatgaac
     9901 ccggcgaact gaccaatgtc gaacaaggcg aaagcgtttg cgttccggtt gacgacatca
     9961 gcgactggat gttcgtgtgc aacggcattc cctacggcgg ctttaccata caggcaatgc
    10021 gtggacagat gacggaagag gagcgtaccg aacacgatgc cgcatgggga atcgatttcg
    10081 gcgatcccgg gcaggtattg ctggtgtatg aagaaaaaga acatcccgaa aatctggaag
    10141 agcatccgat gtgccggaac tgtattgacg attttcggca acagttgtcc caaaatccgg
    10201 attttctgca tgagcaggac gaagacggct atacgccgct tcatcatgaa gccatcgcag
    10261 gaaatgcact tatggttcaa gccatgcttg aatacggcgc aaatcctgcc tcaaagacat
    10321 cggaaggcta taccgccctc gattttgccc gcctggcggg ctggcaaaat gttgccgacc
    10381 tgctcgaacc gcgacattag gcggacagtt ttccgaaaac gaacacaaac actttttaca
    10441 gaaagacaat aaaaatgccc aaaatcaccg tacttccaca cacgacatta tgccccgaag
    10501 gcgcggttat cgaagacgcg cccgaaggca aaaccgtcct tgacgtgctg ctcgaccatg
    10561 atatcgaagt cgatcacgcc tgcgaaaaat cctgcgcctg cacaacctgc cacgtgatta
    10621 tccgcaaagg tttcgacagc ctggaagagc cgaccgaatt ggaagaagac ctgctcgatc
    10681 aggcttgggg tttggaagcc gattcgcgcc tgagttgtca ggcggttgtc gccggcgagg
    10741 atttgattgt ggaaatcccc aaatacacca tcaaccacgc gcgagaagaa cactgaaaac
    10801 aggccgcctg aagccggcac gcttcagacg gcattgttgc gcggataagg cgcaatcgcc
    10861 cgaaaacagg cgttcgtaca ggcggaactt tcgattctat agtgaattaa caaaaatcag
    10921 gacaaggcgg cgagccgcag acagtaccaa tagtacggca aggcgaggca acgctgtacc
    10981 ggtttaaatt taattcacta tatattgatt tttatcggtt ttctgacgga acggattggt
    11041 gcggcatccg aggcggatta ctcgggcgcg atgcacgggt atttatcggt tttgcagccg
    11101 gaaaaaccgc cggcgggtta ctttcagggc ggcggtcggg cggtatgccg gatagcgttc
    11161 cactttcgct tctatattga ttttgattgg ttttctgacg gaatgatccg atgcggcatc
    11221 cgggacggct tgtgtttctt cctgcccgcc tgccggatat tcctgtactt gcacgaaacc
    11281 gaaagaggtg gcggtgcggc ggacaagctc gagatagcgt ccttcaagct ccggacaggc
    11341 ggcggacacg ctttctgccg taaccgtgaa gccgccgccc gacccggcaa ggcgttccgc
    11401 aatctgcgtg tagatgcgcc aacgttgggc gcgcaacatt gccgcatcgc aaccggcagc
    11461 cgctttatcc aaggcaatca gaccgcgcct gctccggtag tgaaggcaaa ccgttactct
    11521 ggagaggata tgttgcccgt ccaatatttg atacagtttg cgtatcagca gaatcaggcg
    11581 gtcaaactcc tccatctccg acagggaatc aggatggtcg gaagcggtat aaaccagttt
    11641 ggacaatttt gcggcaaaca tattgttcat caatcttcct tgtcggttga aaccccgctc
    11701 ttcggggcgg tagaatcaga tttgtttggg agggacaact cctcccagat caggacgaca
    11761 cataggctgg tgcttgatgt gttgtccggc gagttgaaac attcagccat cctcaaggtg
    11821 cggcagtttt gccgaaacat attctacacg gcttcaatgc cggacgataa aaggaaattc
    11881 atatgaaatg gaccgacacc cggcgtatcg ccgaagaact ctatgacctg cacggcgaaa
    11941 ccatcgatcc cagaaccgtg cgctttaccc aactgcgcga cctgattatg gcattgcccg
    12001 aatttgacga cgaccccgcc cgttgcggcg aacgcatcct cgaagccgtg cagcaggcat
    12061 ggatagacga ggcggaataa gtttcgggaa tgccgtctga aatgcggcgg tacgcggttc
    12121 gtgcttctgt ttgcagcggg aatggtttta ccagtctcct tttttcagcc tgtccagttg
    12181 gcggcggtcg cgcttggtcg gtctgccgtc gggataggcg gaagtgatgc ggctgaattg
    12241 gtcgagctgt ttgcgctctt ccctcaatgc tgccgttttt gcgtcttctt catacagaag
    12301 ccgcgcctcg gatgccgggc ggcgttggtg gttcaaacct ttaaccttga ttttataggg
    12361 aagggaattg agcgtcaggt cgataatatc gccgatgtct atggttttac tgtttttgac
    12421 cttcgagccg tttacttgaa ccctacccag ttcgatgtgc ttttgcgcaa gggaacgggt
    12481 cttgaaaaaa cgtgccgccc aaagccattt gtccagccgc atggcggaag aatcgtgctt
    12541 gtctttcata cgattttgtt tgaaataatt gaatttgttt cgagtttagc ataagatacg
    12601 ccgcctataa ctagtatata tgcactaatc cactgttttc catgctgtcc gaacacaaaa
    12661 agagggtgtg gaaaagccgt tttggacaat aaattaactg cggaatatgc acaaatagcg
    12721 tatgatagcg gcagaatctg ttgatgagag cttcattcta tgaaacctgt ttttttggat
    12781 tttgaacaac ccatagccga actgaccaac aaaatcgatg agctgcgttt cgtccaagac
    12841 gagtctgccg tcgatatttc ggacgaaata caccgtttgc agaaaaaaag caacgacctg
    12901 accaaatcga ttttcagcaa acttacgccc gcccaggttt cacaggtttc ccggcatccg
    12961 cagcgtccct atactttgga ttacattgat gcgctgttta ctgattttga agagctgcac
    13021 ggcgaccgcc attttgccga cgatcatgcg attgtcggcg gattggcgcg tttcaacgga
    13081 caaagcgtga tggtcgtcgg gcatcagaaa gggcgcgaca ccaaagaaaa aatccgccgc
    13141 aacttcggta tgccgcgccc cgagggctac cgcaaagccc tgcgcctgat gaaaacggct
    13201 gagaaattcg gcttgcccgt catgaccttt atcgatacgc cgggcgcgta tcccggcatc
    13261 ggcgcggaag aacgcgggca gtcggaagcc atcggcaaaa acctgtacga actgacgcgc
    13321 ctgcacgtcc ccgttttgtg taccgtcatc ggcgaagggg gctcgggcgg tgcgttggcg
    13381 gtcgccgtag gcgattacgt caatatgctg caatactcga cctattctgt tatctccccc
    13441 gaaggctgcg cttcgatttt gtggaaaacc gccgaaaagg cggcggatgc ggctcaggct
    13501 ttgggcatta ctgctgaccg cctgcaaaag ctggacttgg tcgataccgt catcaaagaa
    13561 ccattgggcg gcgcgcatcg ggatttcggg caaaccatga aaaacgtaaa agccgttttg
    13621 gaaaaacaac tgcacgaagc gcaaagcatc ccgcttgccg atttgctttc gcgccgtttc
    13681 gaccgcatta tggcttacgg caaattttcg gaacaataat tcaggtagaa caagcagcaa
    13741 gcagtttgtc tgaaactgct tgctttttct ttatcgggac ggaaccgtgc tgactttaga
    13801 tgcgtttgag caatgcttga aggattgttt tcctcaaggt ctgaatggaa aaaaaacagc
    13861 agtggcatta agcggcggct tggattccgt cgttttgctg catctgcttg tccgcgccgg
    13921 aaaaaagggc ggttttattc cggatgcatt gcatatccat cacggcttga gtccccgtgc
    13981 cgacgattgg gcagatttct gccaaaacta ttgcgatatg ctcggggtgg ggctggaaac
    14041 ggttaaggtc tgcgtggaaa aaaacggttt gggcatcgag gcggcggcgc ggcaaaagcg
    14101 ttatgccgcg tttgccgaaa aaggctttga cgttttggcg ttggcgcacc acagggacga
    14161 tcaaatcgaa acctttatgc tggcagtcgc tcgcggcggc ggtttgcgcg ctttggcggc
    14221 tatgcccacc gtccgccctt ttggggaaaa aggcatcatc tggcggcctt tgctgccttt
    14281 ttcgcgccaa gacatatggg attatgccca aaaacacggt ttgccgaata tcgaggacga
    14341 aagcaatagc gatacggctt atttgcgaaa ccgcttccgg caccgtattt tgcccgaact
    14401 ttcggcgcag attccccatt tcgggcggca tgtactgaac aatgtccgcg ctttgcagga
    14461 agatttggct ttgttggacg aaatcatcgg tcaggactgc cgttgggtct gtgaggaagg
    14521 cagtttcgat acggtgcgtt ggcaggcgtt ttccccacgc cggaaaaccc atattttgcg
    14581 gtattttttg aaggaaaacg gcatccccat gccgaatcag aatgcccttg ccgacattgc
    14641 ccgggttttg acggaggcaa aaaccggacg ttggaacttg caaggctttg aattgcatca
    14701 ttatgcaggc aggctgtttg tgttccgact ggaaaaaacg gataaactgc ggtttttgaa
    14761 agacaggcag ataagcggaa atttaaggga aatattgacg gggcagggat ttgttttaaa
    14821 acgtcatccg tttgggcttc ctgagcatct tttggagcag gacggaattt tgaggacggt
    14881 agcggtatcg gatacgttgg ctgtcggcgg catccataag gatgtgaaaa aaatccttca
    14941 ggggaaacgg gttttgcctg tcctgcgccc aatttggccg cttgttgccg acagcggaaa
    15001 ccgtccattg gcgttggcaa actgttgtgc ggattttcaa atctcggttt cagacggcat
    15061 tttgcccgtc catcctgact ttcccatttt attttgataa tatcgcaaac agatttcggc
    15121 ggcgttcagt cgggtattgt ccggttgcat atttctaaaa ggcttgtgaa gtgagacaca
    15181 tcagttcgac caataatgaa cacatcagac acctgcaccg cctgttgtcg caaggaaagt
    15241 tcagacggca atacgcccaa accgttttgg agggcgtgca cctgcttcag gttttcctgc
    15301 aatccggcgg gatgccggtc ggggtatata ttcccgaggg caaaatgccg tctgaagaaa
    15361 tccgcaggct gagggcggtt gtgccggaag gcaggatttt ttccgtttca gacggcatat
    15421 tgaaaaaaat cagtagcttg agttgtgcag acgatatact tgcactgatt gatatcccat
    15481 tgggcggaac cttgccggac aaaggcgact gtgtggtttt ggacggcgtg caagatccgg
    15541 gcaatgtcgg caccgtctta cggagtgcgg cggcggcagg ggtaggtacg gtcgttttgg
    15601 gcaggggttg cgcggacgcg tggtcgccca aggtattgcg cgcggggatg ggcgcgcatt
    15661 tcttgtcggg catttatccg caggcggatt tggaaatatg gttggcgcgc tataaaggcc
    15721 gtgtgtttgc caccgccttg cgcgaggaaa agcaggcggt tttgtacggc gaagatttgt
    15781 gcggaccgac agcctgggtg tttggcaacg aaggcgcggg ggtcggtaaa gcggttttgg
    15841 acagggcgga caagtgtgtc aggattccga tgcacgatgc aaccgagtct ttaaatgtcg
    15901 cgatggcggc gacaatctgc ctgtttgaac agatgcggca gcggtcggcg tattgaggaa
    15961 aagaaatgcc gtctgaaaaa atctattacg gcgtattgat tttcttatgt atcgcttcta
    16021 tgctgctgtc gccgtttttt tatgcgggtg ctttgaagcc caagaaggcg gcattgcgga
    16081 aggacgggca gtggaaactc atctgattgt ccaataccgt ggcggcggcg gttttggctt
    16141 gggtgtggtg gaaatggttt tgacagatat tgctcaaaat cgtgctaatg gaatccgaac
    16201 aaataaagaa tttggtaaaa aatttgttaa atcaaagaat taaagttttg tggaaaacaa
    16261 aacagctcta agcaaatagg gcgtttgtcg gtaaatacgg aagagttgcg gcattatcgg
    16321 gcatctttaa caagtagtgc cgtcttggca ggcaatcggt ttttatgggc agcttgcaaa
    16381 atcgcggata taaaattgcg aatcggttaa agtgtgggga cgctatgaaa aattgcgaat
    16441 ttttttatga cccgacaagg gcaatctatg atagcggtgc agattactta actagggaaa
    16501 aacatagatt agtcgtaatt gcaaatagtg cttgggggct attacttaat ttatcttgtt
    16561 attatgacga ggttttggaa aagcggaaaa taccgttcgg caaacaggaa attgatgacg
    16621 atatggacaa agtgtccgcc cttaagcgga agtttaaaga tatttctgaa atcaaagtag
    16681 gggatggttg ggaatacccg ttcaattatg agcagggaat gaaagaatta gatgaagtgc
    16741 tattgaaata cattcccttt tttgaagaag aacgataaag gaggttgata tgcgcgtatc
    16801 taaaataatt ggaagtatgt tgcttgttac agcggttcag accgtatttt cggcaaatgt
    16861 ttacgcgtgc cgccataatg gtaaaaccag ttacagccaa actccgggaa aacattgtac
    16921 caacgcgggt ttggggcggg accgggtgta cagttcggtt agaccggcag taaaagacag
    16981 ggcggaagac gcaggggtcg gcgattattc ggacacggtg agggacgaac acgtccaaaa
    17041 tccgaaaggg aatgcacaga aagacggttc ggatgccggc atcaggccgc attgattgaa
    17101 accgaatcag ccatgacggc gttgaataat agaatttgaa cgattaggga actctgatga
    17161 aacacatcca cattatcggt atcggcggca cgtttatggg cgggattgcc gccattgcca
    17221 aagaagccgg gtttgaagtc agcggttgcg acgcgaagat gtatccgccg atgagcaccc
    17281 agctcgaagc cttgggtata ggcgtacacg aaggcttcga cgcggcgcag ttggaggaat
    17341 ttaaagccga cgtttacgtc atcggcaatg tcgccaagcg cgggatggat gtggttgagg
    17401 cgattttgaa ccgcgggctg ccttatattt ccggtccgca atggctggct gaaaacgtgc
    17461 tgcaccatca ttgggtactc ggtgtggcgg ggacgcacgg caaaacgacc accgcgtcca
    17521 tgctcgcatg ggttttggaa tatgccggac tcgcgccggg cttccttatc ggcggcgtac
    17581 cggaaaactt tagcgtttcc gcccgcctgc cgcaaacgcc gcgtcaagac ccgaacagcc
    17641 aatctccgtt tttcgttatc gaagccgacg aatacgacac cgcctttttc gacaaacgct
    17701 ccaaattcgt acattaccgc ccgcgtaccg tcgtgttgaa caatctggaa ttcgaccacg
    17761 ccgacatctt tgccgacttg ggcgcgatac agacccagtt ccaccacctc gtgcgcaccg
    17821 tgccgtctga aggcttaatc atctgtaacg gacagcagca aagcttgcag gatactttag
    17881 acaaaggctg ctggacgccg gtggagaaat tcggcacgga acacggctgg caggccggcg
    17941 aagccaatgc cgacggctcg ttcgacgtgt tactagacgg caaaacggcc ggacgcgtca
    18001 aatgggattt gatgggcagg cacaaccgca tgaatgcgct cgccgtcatt gccgccgcgc
    18061 gtcatgtcgg tgtcggcatt cagacggcct gcgaagcctt gggcgcgttt aaaaacgtca
    18121 aacgccgcat ggaaatcaaa ggcacggcaa acggcatcac cgtttacgac gacttcgccc
    18181 accacccgac cgccatcgaa accaccatag aaggtctgcg tcagcgcgtc ggaaacgccc
    18241 gcatcctcgc cgtcctcgag ccgcgctcca acaccatgaa actcggcacg atgaagtccg
    18301 ccctgcctgt aagcctcaaa gaagccgacc aagtgttctg ctacgccggt ggcgtggact
    18361 ggaacgtcgc cgaagccctc gcgcctttgg gcggcaggct gcacgtcggc aaagacttcg
    18421 atgccttcgt tgccgaaatc gtgaaaaacg ccgaagcagg cgaccatatt ttggtgatga
    18481 gcaacggcgg tttcggcgga atacacggaa agctgctgga cgctttgaga tagcccgggc
    18541 gatgccgtct gaaagccctt cagacggcat cgtccggctg cgcggcacaa aggcggaaaa
    18601 accgtttgcc ccgtattttc aaacgcgtta cacttgccgc cgctgttttc agccatttga
    18661 ttacccgcaa ccgccgtcat tgcgccggcg gtttgcctgt cagcgtcatt gcgccgctgt
    18721 aaatacgaaa gaacacatta tgaccgtatc ccccgtcgcc ttgcgccgta agaccgagtg
    18781 caagcctcat cccaccgcgc gctattggaa aaaatgcgat gtcgaagccc tgttcggact
    18841 tcccttcctc gacctcattt accaagccgc cgaaatccac cgccaaaatt tcaacccgcg
    18901 cgaaatccag ctttccacgc tgttgtccat caaaaccggc ggttgtcccg aagactgcgc
    18961 ctattgtccg caatcggcgc accacaatac caatctgggc aaagagcaga tgatggatgt
    19021 ggatgaaatc gtcgaaaaag ccaaaatcgc caaatcgcgc ggcgcaagcc ggttttgtat
    19081 gggcgcggcg tggcgcggcc ctaaacccaa agacgtggag acggtttccg caatcatcaa
    19141 agccgtcaag ggcttgggta tggaaacctg cggcacgttc ggtatgctcg aagaaggtat
    19201 ggcggaagac ttgaaagagg cgggcttgga ttattacaac cacaacctcg acaccgaccc
    19261 cgaccgctac aacgacatca tccacacccg ccaacacgaa gaccgaatgg acaccttggg
    19321 caaagtccgc aacgccggtt tgaaagtctg ctgcggcggc atcgtcggga tgaacgaaac
    19381 ccgcgccgaa cgtgccgggc tgattgccag tctcgccaat ctcgacccgc agcccgaaag
    19441 cgtgccgatt aaccggttgg tcaaagtgga aggcacgccg cttgccgatg ccgaagattt
    19501 ggactggacg gaatttgtcc gcaccatcgc cgtggcgcgg attacgatgc cgcaaagtta
    19561 tgtccggctg tcggcagggc gcagcaatat gcctgaagca atgcaggcga tgtgctttat
    19621 ggcgggcgcg aactcgattt tttacggcga caagctgctg accacgggca atcctgatga
    19681 ggacggcgac agaatcctga tggaaaagct caacctgtat cccttgcagt ttgaaccgga
    19741 aggcgaggtc gccgaagtgg aaaaagcctc tgggattaaa gtggattatt gacgattgaa
    19801 aaatgccgtc tgaaacccgg aaaaaggctt tcagacggca tttgtccgga cggcatttcc
    19861 aatatctttt taccggcgcg tgatgctgcc gtcgggcgag acatccagtc cgttcccctt
    19921 ggggaaatcg ctgcggttca gataaataat ccgcccgata acggttttct cggggtcgat
    19981 tttggggatt ttatcgccga cttgagtgat ggggataatg ttaccggaaa cgaaccgccc
    20041 ctgtttgtcg gtgataattt tgaaaatcgg cgcgatgccg ctgatgccgg aggtgttgat
    20101 tgcgccgtag gtggcaaagt tgccgccgct gtaggagatg aagcggtcgc ggtaaagttc
    20161 gacggcgcga gtaacgtgcg gcccctgccc gaatacgaca tccgcgccgg aatcgacggc
    20221 aagccgtgca aactcgacga cgttgcccct gttttcccca tagaagattt cggtatcgaa
    20281 cggcaggtgt tccgcctgtt tcccttccgc gccgccgtgg aacattacaa tgacgatgtc
    20341 ggctttctgt ttggttttgg taatcagttt tctaactttg gcataatcgt tcagtttgac
    20401 ggcggcaagg ttgggggcga aggagacgaa gccgtatctt acgccgtttt tcttcaggat
    20461 ggcggtttca aacctgtttt cgatgcccga atatttgatg ttcaattcgt caaggttcgc
    20521 cctttatgcc gtttccgcac cgcaaaccgc cggggtcaag ccctcggcgc atcctgccgg
    20581 aacggaatcc ccgtgctgcc gattgacggt tcaaaccccg cgcccgtttc aaataccggc
    20641 gatgtggacg gacaggatgc gactgacgaa aagacagccg ataccgtttc cattatcggc
    20701 gtgggcgaca ttatgctcgg cagcaattat ccggtcgatt acctgcccga taccaatatt
    20761 ctgaaaaacg tcgaatctgc cttgcaagac gcggacatta ccgtcggcaa cctcgaaggc
    20821 acgctgtttg acgaaggcgg tacgccgaaa aaatgtgcaa acccccaaaa tatgctatgc
    20881 attccgaacg ccctccgcat acgggcaata ccttgccgac gcgggattcg actacctcag
    20941 cttcgccaac aaccacagca acgacttcgg cgcgcaaggc atcacggcaa cggcggcggg
    21001 cggcagctct tttacatact caatcgcgct aaagccgctg ccgataacga ggccaaaatt
    21061 gcggaaaata ccgccatcgc ccagataaat ttgtccatca tcagaccttt actgttcaga
    21121 cgagacagca tttgccgcac gttttggggc ttatctttcg atttgcgcta cgtcgcgcac
    21181 cgcgcctttg tcggcggaag tcgccatcgc gccgtaagcc cttaatgcgg cggagacgta
    21241 gcggtcgcgg ttttccggtt tccacgcttt gctgccgcgt gcttccattt cggcacggcg
    21301 cgcggcaagc tcttcatcgg aaatgacaag gtggatgctg cggttgggga tgtcgatttc
    21361 gacggtatcg ccttcgtgta ccaaaccgat cgcgccacct tccgccgctt cgggcgaggc
    21421 gtgtccgatg gacaaacctg atgtgccgcc ggagaagcgt ccgtcggtta agagagcgca
    21481 ggctttgccg aggcctttag atttcaggta ggaagtcgga tacagcattt cctgcatgcc
    21541 cgggccgcct ttcgggcctt cgtagcggat gatgacgatg tcgccggcga cgatttggtt
    21601 gcccaaaatg ccttcgacag cggcttcctg gctttcaaac acgcgcgcgc ggccggtgaa
    21661 tttgaggatg ctctcgtcca cgcctgcggt ttttaccacg cagccgcgtt cggcgatgtt
    21721 gccgaacaag accgccaaac cgccgtcttg cgagtaggcg tgtgccacgt cgcggataca
    21781 gcctttttcg cggtcgaggt cgagtgtttt ccacatacgg ttttgcgaga acgcttgggt
    21841 ggtgcgtacg ccgccgggcg cggctttgaa gcgttcgatg gcgcgggtgt tttcagggtt
    21901 ggttacgtcc catttttcaa tcgcgtcttt cagcgtcggt gcgtggatag tgtgcacgtc
    21961 ggtgtgcagc ttgcccgctt tgtccaattc tttcaggatg gcgaagatgc cgccggctcg
    22021 gtgcacgtct tccatatagt agtcgtggtt gttgggtgcg gttttgcaga tgcagggcac
    22081 aacgcggctt aagcggtcga tgtctgccat tttgaaatcc acgcccgctt cgttggcaac
    22141 ggcgagtaaa tgcaaaatag tgttggtgct gccgcccatc gcaatatcca tcgtcatagc
    22201 gttttcaaac gcttttttgg tggcaatgct gcgcggtaac acggtttcat cgttttgctc
    22261 gtaatagcgt ttggtgattt cgacaatcat acggccggct tcgaggaaca attctttgcg
    22321 gccggcgtgg gtcgccaaat acgaaccgtt gccgggtagg gacagaccga gtgcttcggt
    22381 caggcagttc atcgagtttg ccgtaaacat acccgaacac gagccgcagg tcgggcaggc
    22441 gttttgttcg acttcttcaa cttgccggtt gctgacattg tcgtccgccg attcaatcat
    22501 cgcgtcaatc aagtccaaac ggcgttcggg ctggatgttt gccacgccga taactttacc
    22561 tgcttccatc ggaccgccgg aaacgaagat ggtcgggatg ttcaggcgca tcgcggcaat
    22621 cagcatgccc ggggtgattt tgtcgcagtt ggaaatgcac accagcgcgt cggcgcagtg
    22681 ggcattgacc atatattcga tggagtcggc aatcaaatcg cggctgggca gggagtacag
    22741 catgccgctg tgtcccatag cgatgccgtc gtcgatggcg atggtgttga attctttggc
    22801 gatggcgccg gctttttcga tttcgcgggc aaccagctgg cccatattgt gcaggtggac
    22861 atggccgggc acgaattggg tgaaggagtt ggcaacggcg atgatgggct tgccgaagtc
    22921 ggtttccatc acgccggtgg cgcgccacaa tgcacgtgcg cccgccatat tgcggccgtg
    22981 ggtggaggtt ttggagcggt attctggcat agtgtgtttc cttgtgccta taccgtctga
    23041 aagacagggc tgtttcagac ggtatcgggt acggtttttt agagtgggaa aagagggtat
    23101 tttataccaa gtatcggaat tttgcgggat tgaaacggcg tgcggcaaaa aagaaaatcc
    23161 ccgcaggaat gcggggacgg gttcaggcgc gggcaatcgc gacggctttg gatgcgtccc
    23221 aaaaatcaac gggtgcattt aatacgggtt tgacgatgcc cgtccgtatg gcgaaatcgc
    23281 cgaaaccttc gccgatattg cgttctgccg cccatttgcc gatcaggtcg tccaattcgg
    23341 caaggatttc gggcagggtg atgttttctt tataaaggcg ggggatgcgt acgccttcac
    23401 ggtcgccgcc gatatggagg ttgtagcgtt cgacggcttt gccgaccagc ccgatttccg
    23461 ccaacattgc ccgtccgcag ccgttggggc agccggtaat gcgggtaacg atgtagtcgt
    23521 ccgacgtgcc gtgtttcgcc ataatcttat ccagctcgtc gatgaagtcc ggcagcacgc
    23581 gttcggcttc cgccattgcc agcgggcagg tcgggaagga aacgcacgac atcgcatttt
    23641 cgcgcagttt gctgacatcg ttgcggatta atccgtatgt tcgggcaagt tcttcgattt
    23701 ttgctttgtc tgcttcggcg acatttgcca cgatgaggtt ttggttggcg gtaatgcgga
    23761 aatcgccttt gtggattttg gcgatttcca acacgccggt cagaagctgt ttcccgcctt
    23821 cgtcaaccaa acggccgctt tcgatgaaaa gggtcaaatg ccagttgccg tctatgcctt
    23881 ttacccagcc gatgcggtcg ccgcgcccgg taaatttgaa cgggcgtatg ggttcgaacg
    23941 gcatacccat acggcgttcg acttcggcgc ggaagttgtc caagcccata ttttgaatgg
    24001 tgtagcgggt gcgggcgttt ttgcggtcgc tgcggttgcc gaagtcgcgc tgtgtggtta
    24061 ccaccgcttc ggcggccttc agcgcgtgtt ccggaggtac gaaacccagt tccagtgaaa
    24121 tgttcggata ggttttggtg ttgccgtgtt ccattgaaag cccgccgcct gccaaaacat
    24181 taaaaccggc aagctgtccg ccgccgtctg aaatggcgac aaaatccaag tcgttgccgt
    24241 agcagtccac atcatttaag ggcgggatga cgactgcggt tttgaatttg cgcggcagat
    24301 aggttttgcc caaaatcggc tcgtcttctt gaaggaagtc gtcggaactt tgaacttttt
    24361 tgccgtccac ccacacatcc agataaccgc gcgtgcgcgg cagcaggtgt tcggaaatct
    24421 ttttcgcgta ttcgtaagcc tgccggtgca gttcggactc gatcgggttg gacgtgcaaa
    24481 gcacgttgcg gttcatatcc gccgccgtgg cgatggaatc caaacccagt ttgtgcaaga
    24541 ggcggtgcat cgtctgcaac ttggctttcg gcacgccgtg aaattggaag gtttgccggt
    24601 tggtcagccg gatggagcgg taatgactgt tttcccgggc aaatttgtcc agttctatcc
    24661 attgggacgg tttgatgatc ccgcccggca gtcggcagcg caaaagcata aatttcaaag
    24721 gctcgagttt tgcctcggcg cgttcggcgc ggatgtcgcg gtcgtcctgc tcatacatac
    24781 cgtggaagcg gatgagttgg aagttgtcgc ctttgaagcc gcccgtgagc gggtctttca
    24841 aatcgtccaa aatcgtgccg cgtaaaaaat tgctttcggt tttcagacgt tcgttgtcgg
    24901 atagcggttt ttcttgccac gccaaacctt ttgtcttggt ctgtacggtc attttgtgtt
    24961 cctcccgatt atatttaatc aataaacatc acgctgatag cgtttttctt cgcgcagcat
    25021 atccaaatat tcttctgcgc cctcttcgtc caaatgtcct gccccgataa tcacatccag
    25081 caaggcggct tccacgtctt ttgccatttt tgccgcatcg ccgcacacat agatatgcgc
    25141 gccttcctgc agccattgcc aaagtccttc cgcctgttcg cggattttgt cctgcacata
    25201 gattttttct tcctgatcgc gcgaccaggc gaaatcgtat ctgtgcagga agccgtcttt
    25261 ggcaaactgc tgccattcgg tctgatagag gaagtcggcg gcaaaatgcg gattgccgaa
    25321 aatcagccag tttttgcctt ccgcattttc tgcggcacgt tgttggacga aagcgcggaa
    25381 cggtgcgacg ccggtgcccg agccgatcat cacaatcggc ttgcggctgt cttcgggcag
    25441 cctgaagccg tcgttgcgtt ccacaaacac gcgcaccgtg ccgtcctctt ccagccggtc
    25501 ggcaaggaaa cccgatgcgc cgcccgctct ggcgcgccct tcgtgttcaa aacgcaccgc
    25561 gccgacggtc aggtgcactt cgtcccccac ttccgcctgc gacgaggaaa tcgaatacag
    25621 gcgcggcgca agcgggcgca gcaggccggc gaattgttcc gccgtcagtt ttgcagggaa
    25681 gcggtgcagc acatcggcaa tcggcgtgct ttgcacaaag ccttgcaaaa cggcgttgtc
    25741 ggcagcaata cggtcgagtt cgtcatcatc ggcgaacgag gcatagcctt tgacaaaggc
    25801 gggggtgttt tgcgtgagtt caaaatggga taacagtgcg gaggcaaccg gcagggtttt
    25861 tccgcccgcc tgtatttccg ttgcctgatc gatgccgagc aggtctagga tttccctgac
    25921 cagtgccgga tcgttgtcaa accaaacgcc gagcgcgtcg cccgggaggt agtgcaaatc
    25981 cgaaccgctc aaatcgattt cgatgtggcg cacgtcttta tcggattggc gggcggtgat
    26041 tttctgattg gccagcaggg cggcgggaaa gggggctgcc ttgcagtacc tgccctccga
    26101 tgccgtctga aggtcggcgg ggggcgttgc ctgcggcgcg ggcgttgccc ggttttttgc
    26161 ggcttcttct tttaagagtg cggcgatatt gtctgtccag gcgtttgcgg aggcggtaaa
    26221 gtccaaatcc gcatcaacgc gttcgagcag gcgtttcgcc cccaattctt caaaacgttt
    26281 gtcgaaatct ttgcccgccc ggcagaaatt cggataggaa ctgtcgccca aacccagtac
    26341 ggcaaattgg agtttgtcca atttcggggc ttttttgccg ttcagcagtt tgtgcagcac
    26401 gacggcttct tccggcggtt cgccttcgcc ttgggtggac gtaaccagca gcaggcggcg
    26461 ttcgccggcg atgtttttcg ccttatagtc tttcagttcg gcgcgactga cttggatgcc
    26521 ggcggcttcc aggctgtccg ccgctttgtc ggcaacggat ttcgcattgc cggtttgcga
    26581 ggcggaaagg acggttacgg aaaaaggttc tgccgtcggc aatgccgtct gaagcgcggg
    26641 cagtcctgca gatgccccgt ttcctgcttt tgcccaagcg tagccggaca gccacgccca
    26701 ttgtgccgcg tccagccccg acaggagctg cgtgatttcg ggcggcagag gcggtaatgg
    26761 cggatttgtg ttctgcatat cgtgttcact cataaaatca tacctgccgc aacagtgccg
    26821 tatgtcgctt cgtctatcag gataaacgaa ccggcggcgg tgttttccgc ataaggcgtt
    26881 gccgtaacgg gtttttgaag gttgatgcgg actttggcga tgtcgttcat cttcaaggat
    26941 tccgcgccgg cctcttgttc cagcgtgcgg acatccaaaa cgctttcaat ttccccgact
    27001 tttgccggca cggtttgcgt gccgtgcttg agcaggtatt tgcgcgcggt gttgagcgga
    27061 cgttcgtcaa accagcaaag cgtggcttcc agatgttttt gcggggcgag cggggaattt
    27121 ttatcgacaa aaaggtcgcc gcgcgaaaca tcgatgtcgc ggtccagccg gagggttgcc
    27181 gcctcgccgg caaaagcctg cgccacttcc cctttcggcg tgatgatttc ggacacttcg
    27241 gcggtcagcc cgttcggttc gatgcggacg gtttgcccga cggcgaccga accgcgttcg
    27301 atgcgcccct gatagcctcg gaaatcatcg gccttgtcgg catcttggcg gacgaccagt
    27361 tggacgggga aataaaaatc ggcagcggaa cgaccggttt cgtccgcccc cggcaggttt
    27421 tccaaaatgg acaataaggg ttcgccttta taccaaggca tattgccgcc ggggtaaacg
    27481 atgttgtcgc ccaagagtgc ggacaccggt acgaaatgca cgtctttcaa accgagctgt
    27541 tcggcaagtc ggcggtatgc ctccacaatg gcgttgaatt tgtcttcgct gtaatccagc
    27601 aggtccattt tgttgaccgc caccacaata tgcgggcagt tgagttggcg gaggatggcg
    27661 gaatggcgtt tggtctgcgg cagaagctgc aagggctgcg cgccgaaatc cagttgggat
    27721 gcgtcaacca gtacgactgc cgccgaagcg gtgcttgcgc ccgtaaccat attgcgcgtg
    27781 tattgttcgt gccccggcgt gtcggcgatg atgaatttcc gtttcgccgt ggaaaaatag
    27841 cggtatgcca catcgatcgt aatgccctgt tcgcgttcgg cttccagtcc gtcggtcagg
    27901 atggagaagt ctatggtttc tttcaaaccg ttgcttttgc cggattccaa ggttttgatt
    27961 tggtcggaca gcagggcttt gctgtcgtag agcagtcgtc cgattagggt gcttttgccg
    28021 tcatcgacgc tgccggcggt aatgaagcgg agcggggttt ggtgttgtgc cgtcatattt
    28081 tcttcctcat atctgcttaa agggtttttg aaatttagaa atagccttct tttttgcgtt
    28141 tttccattgc cgcctcgctt gcctgatcgt ccagccgggt cgcgctgcgt tcggaaatgt
    28201 cggcaaccgc cgtttccctg ataatctccg tcggcgtgga cgcggtgctt tctaccgggc
    28261 aggtgcagct gatgtcgccg acggtgcgga agcggacatc aaggatttcg gaggtttcag
    28321 acggcatttt cggcgtaagc ggcgtaacgg ggaccagcag ccccctgcgt ctgaccactt
    28381 cgcgcctgtg gctgtaataa atcggcggca gttcgaggtt ttcgcgggcg atgtattgcc
    28441 agatgtcgag ttccgtccag ttggaaatcg ggaagacgcg catattttcg cctttgtgca
    28501 gcctggtgtt gtacagcgac cacagctcgg ggcgttgcgc cttcggattc cattgtccga
    28561 actcgtcgcg gaacgagaaa atccgttctt tggcgcgggc tttttcttcg tcgcgccgcg
    28621 cgccgcccat cagcgcgtca aagccgtttg cctcgatggt ttccaacagc gtaaccgcct
    28681 gcgccgcatt gcgcgaatcg gtttctttgc gtaaaactac tgtgcctttg gcgatggagt
    28741 cttccacgcg ccccactatc aggcgggcat tgagttttgc cgcctgcgcg tcgcggaagg
    28801 caatcacttc gggataattg tgtcccgtgt cgatatgcac cagcgggaag ggcagtttta
    28861 ccggcctgct gcccagccgg aaggctttgc aggcgagggc gagcaggacc acggaatctt
    28921 tgccgccgga aaagagcagg gcggggtttt cgcattctgc cgccacttcg cggataatgt
    28981 ggatggattc ggattccaac cagtcgagtt gggcgttgtt cggttcggtt ttcgtcatac
    29041 catattcctt atttcttctg tctgatattt atgaattatt tgtgcagccc gcattctttg
    29101 ctgtttctgc cttcccacca ccaccgccct gcgcggatgt cttcgcccgc cttgacgggg
    29161 cgggtgcagg ggtcgcagcc tatgctggga aatccttgcc ggtacaaatc gttgtaaggc
    29221 acattgttgg cgaggatgta tgcccacacg tcgtgttccg accagtcgaa aatcgggttg
    29281 tatttgccga tgccccgtcc ggcatcgtat tcggcaaacg gcagttccgt gcgtgtggcg
    29341 gattgttcgc ggcgttgccc ggtaagccag gcgtccgcgc ctgcaatggc gcggttgagc
    29401 ggttcgattt ttcggatgcg gcagcattcg cggcgcgctt caacgctgtc gtaaaaggca
    29461 aacctgcctt tgctttccac ataatgcagg gcatcttccc gtatcggttg gaaacgcttg
    29521 atttgcatat gcggataaac acgttcaatc ctatccaaca ggtttaaagt ttccgcgtgc
    29581 agcagccccg tatccaaagt aaaaataccg atattgaggt tttctccggc gataaggtcg
    29641 gtaattacca tatcttccgc agcaaggctg ctggcaaacc gtgcatcccg gtggctgccg
    29701 gcaatccggt gcaggcgttg tttgagggtt tccgtttttt ccgcaagggc ggtttcgctg
    29761 ccggatccga tatgcggtat ctgccacagg gcgggtttga gcagtgtcgt ttccattttt
    29821 cccgccttat gccgcccgtt gtccggcatt cagtccgccc aatgcgggat acgcctgccc
    29881 gacccggttt tctccttcgc cgttttcacc gaaccaggcg agtttttcgt gcagccccac
    29941 cacttcgcct atgacaatca atgccggatt cggcgcggtt tcggcgagtt cggcaaggtt
    30001 ggcgagcgtg ccggttgcgg ttttttgagc cggcaacgtg ccttggctga tgacggctgc
    30061 cggcgtgtcg ggcgagcgtc cgtgctgttg cagccgttcg gcaatcaggg cggctttgag
    30121 cgcacccata taaatcacca aggtctggcg gctgcgggcg agggtctgcc attcgatgtc
    30181 gggcgcatcc gccttgcggt ggccggttac gaaaaccgca ctttgggcat aatcgcggtg
    30241 cgtgagcggg atgccggcat aggcggtcgc gccgacggcg gcggtaatgc cggggacgac
    30301 cgaaaacgga atctgatggc gtgccaaggt ttccaattct tcgccgccgc gtccgaacac
    30361 gaaagggtct ccgcctttca aacgcaccac gcgcctgcct tcgcgggcca gcctgaccat
    30421 aagcgcattg gtgtcctctt gcggggtgcg gtcgccccgg gcgcgcttgc cgacaaaaat
    30481 ccgttccgca tcgcggcgga cgagggacag tatgccgtct gaaaccagcg cgtcgtaaag
    30541 caccacgtct gcctgctgga tttcctgtag ccctttgagc gtcagcagcc ccgcatcgcc
    30601 gggacccgcg ccgaccagcg agacggagcc gccttgatca ttttgacgac tttgttccaa
    30661 ttggcctgcc aattcccgtt cggcaagggt gttttgccgg tttttgacga gggcggcgaa
    30721 acgtccgtta aactgctttt cccaaaagcg gcggcgttcg gtaacggatt tcagtttgtc
    30781 cttgacggca tcgcgccacc ttcctgaaat ttccgccata tcgcccaaag acggcggcag
    30841 cagggcttcc agcctttcac gcagcagtcg ggcgaggacg ggcgcgctgc cggagctgga
    30901 aacggcaatc tgaaccgggt tgcggtcgat aaccgacggg aagatgaagc tgcaatggtc
    30961 gcggtcgtcc accacgttga ccggcttttg gcagctttcg gcaagatgga aaacgcgccg
    31021 gttgagggct tggtcgctgc ttgccgcaat gatgaggaaa actgtgcgga tgtgttcggc
    31081 acgaaattct tcggcaagcc acaggatttt gttttccgcc gccaacgcgg agagttcggc
    31141 attcaggtgt tttgcggcaa ccctgacctc tgcgcccgcc ttcagcagca ggctgatttt
    31201 gcgtgcggcg accgcgccgc cgcctacgac caatacgggg cggccggcga ggttggcgaa
    31261 aatagggaaa taattcactg gctgactcct ttgctgtttg cccgcacctt gtttccgata
    31321 cggtgcgtcg cggcattttt gtcggaatgc gggtcatttt agacaaaagg attttcccgg
    31381 ttaaataata aaaaggcatt tgttagaagc tgaaagctat atgagggcgg ctgcggatgc
    31441 ggcggttttc cgttttatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc
    31501 tcaaagagaa cgattctcta aggtgctgaa gcaccaagtg aatcggttcc gtactatttg
    31561 tactgtctgc ggcttcgtct ccttgtcctg atttttgtta atccactata aaacggtttg
    31621 ggacggaaaa acggcctgaa gccgtttcgg gcattcagac cgtttgcgcg gagaggggat
    31681 gccgtccgaa gggcgaaaag ggcttcagac ggcattgatg tcgggtttca ggacaggagc
    31741 aggatggcgg ctgcggcaag cgcggcaacc gataatgcgg cggcaagcgc ggttttgccg
    31801 gcaaagcgga ttgaggtttt gccttcgatg tatttgaagc cggttatcat cgggaggacg
    31861 aggtttttct ttttgaacac gcggtatgcg gcgacggcgg cgatatgaat ggcggaaaaa
    31921 acggcgagca gcttgaaaaa gttgaggtgg attttccgca taaggctgcc cgtatgctcg
    31981 gaaaccaaat ggttgaggta gccgttggtg ctgaaggtgt tttcatcggc ggcaaaaagc
    32041 cctgtgccga cttgaaatga gacggcggcc aaaagcgcga cgaccatcag tgcgcccaag
    32101 gggttgtgtc cgggttggac gtgttcggga ataccgtttt tcatatactc tctgataccc
    32161 gaccatccgc ggacgaaacg ggagaaacgg gcggtatcgc tgccccaaat gccccagcag
    32221 aggcggaata cgagcaggaa aaggataaac agcccgacgc gcgtgtgcca ttgcagcata
    32281 tcgccgccgg ttttcgcgct ataccacata aagggtaggg atgcggcaag cagccagtgg
    32341 aaaaggcggg tggggaagtc ccagactttg gttttgtttt tcataattgg tttccggcgg
    32401 tagaatcggt ttgttttcga gccttaattt taaccgattg gaggggaaat gtttcccgtt
    32461 ttccatcttt caggcgaaag ccgccgccgg atgcttcagg cggcatcgcg ttttccctat
    32521 gttttcaaag cccgtgcgga agattcgcac aaagggactt tcggcacgct cgccgtagtc
    32581 ggcggatcgg cagggatgag cggcgcgccc gtattggcgg catcggcggc gatgtatctc
    32641 ggctgcggca aggtgtgggc gggtttcaat caggatgcgc ttccgtttgc cgtcattgcc
    32701 ggttttcccg aaattatgtt ggacacggca gacggtttga ccaagcgtca aggcataaac
    32761 gcttggatgg taggttgcgg cctgggtacg gataaagcgg cggtcggaac gcttgccgga
    32821 attttggcgg aacacacgga caagcccgtc cttttggatg cggacgcgct gaacatatta
    32881 tcaaccgatg ccgaaacccg aaatctggcg cgcgggtgta aaaacctgat tttaacgcca
    32941 caccccgccg aagccgcgcg cctgcttgga acgacggttg cacaggttca ggcggatcgg
    33001 acggcggcag tgaggaagat aggggcaatt ttcggcgcaa ccgtggtttt aaaggggcac
    33061 aaaacattgg ttgctgcgtc cgatacggaa atctatgtca acgaaagcgg caacgcggga
    33121 ttggcaacgg cgggcagtgg cgacgtattg ggcggcatca tcggcagtct gctcgcacag
    33181 ggcgtgccgg tttttgaagc cgcctgcgcg ggcgcgtggc tgcacggcgc ggcggcggat
    33241 gtcataaaag aatcggcagg cattgcggca gggctgttgg caggggaaat cgctccggcg
    33301 gcaaggtggc tgcgcaaccg gataactaaa agtatgtaag aagatatagt ggattaacaa
    33361 aaaccagtac a
//
LOCUS       DBBZXW010000009        31734 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.009, whole genome shotgun sequence.
ACCESSION   DBBZXW010000009 DBBZXW010000000
VERSION     DBBZXW010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 31734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.009"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..199)
                     /locus_tag="ACJJD2_000417"
     CDS             complement(<1..199)
                     /locus_tag="ACJJD2_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579021.1"
                     /translation="MKKSLIALCVAHCAKLKNDFGVPPLPEIKITPSPVRVGSLKQHP
                     SLRLGKSGVAAAKRAARKRKNR"
     gene            complement(196..741)
                     /locus_tag="ACJJD2_000418"
     CDS             complement(196..741)
                     /locus_tag="ACJJD2_000418"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7579022.1"
                     /translation="MSKIICLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAANKTATGIEALSTPKNKRWCQ
                     VLGKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGATKV"
     gene            complement(884..1405)
                     /locus_tag="ACJJD2_000419"
     CDS             complement(884..1405)
                     /locus_tag="ACJJD2_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579023.1"
                     /translation="MECHADVWHFILEKNMKKFYFVLLALGLAACGQEQSQKADAEQY
                     FFANKYQFADEKQAFYFERAARFRVLQQGLGGDFERFLKGEIPNQENLAKYRENITQA
                     VAYYADTNGDDDPYRVCKQAAQDAEILMKSMVTSGGGGTTDLDKESYQNYRKSMQECR
                     KTITEAEANLPKK"
     gene            complement(1407..1847)
                     /locus_tag="ACJJD2_000420"
     CDS             complement(1407..1847)
                     /locus_tag="ACJJD2_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HGG7579024.1"
                     /translation="MAKAALPDAVKHLLPDSVQALITVIGFNETLELVRLMGGTTYPL
                     RQGYTKNSQSRVAYLEEIIGSEAAGRLVEAMAPCNLFIPRCETALYELRNRKIRSQFD
                     RQTAGGTPAYEAVNDLALAHRLSDRHVWRILKQADKEAEQENLF"
     gene            complement(1821..2579)
                     /locus_tag="ACJJD2_000421"
                     /pseudo
     CDS             complement(1821..2579)
                     /locus_tag="ACJJD2_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            2625..2882
                     /locus_tag="ACJJD2_000422"
     CDS             2625..2882
                     /locus_tag="ACJJD2_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HGG7579025.1"
                     /translation="MKEFPDLEKRLIMLEVAVQDLEERSLTDSFVLAWLLQRITRQEP
                     TSIEQVRSFLQAQAKTFEPDSVQREHLESLLEIVESAQGLA"
     gene            complement(2949..4937)
                     /locus_tag="ACJJD2_000423"
     CDS             complement(2949..4937)
                     /locus_tag="ACJJD2_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HGG7579026.1"
                     /translation="MKISASDIAKLGIPSLPTDRQGIEYHAKKNNWQHCFEQKGRGRP
                     KKLYEIASLPAEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQ
                     RSVADARCAVVAAVLGIKYEYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRS
                     AKVGERTLDGWISAYLKAENAIERLVALAPKTTKAVKPIESYGWLPMFMRFHNIPSAP
                     KLAHSYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYV
                     KRDWGALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAES
                     CVAVSDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQ
                     GRGIIERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQ
                     KYLKKLPSWSRFIADVVKCIDDYNNRPHGELPRHPDGGHYSPKAYREIRLEQDGIAPD
                     MLSAEELATMFMPQEVRKVQRGWLDLFSNSYFSTELAEYHKDEVRVSYDLSDASAVNV
                     FDMDGKFITKAQANGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQ
                     AAAWDELGHLGGNVIEAEYAVLPKTGTDDGIFLFEADM"
     gene            complement(5059..5262)
                     /locus_tag="ACJJD2_000424"
     CDS             complement(5059..5262)
                     /locus_tag="ACJJD2_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HGG7579027.1"
                     /translation="MKKKQESMTDWHRADIVARLKKAGWSVRALSIEANLAPNTLGKA
                     LDAPYLKGERIIAAAIGVPAEEI"
     gene            5484..6201
                     /locus_tag="ACJJD2_000425"
                     /pseudo
     CDS             5484..6201
                     /locus_tag="ACJJD2_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173203.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
     gene            6411..7001
                     /locus_tag="ACJJD2_000426"
                     /pseudo
     CDS             6411..7001
                     /locus_tag="ACJJD2_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            7106..7774
                     /gene="hda"
                     /locus_tag="ACJJD2_000427"
     CDS             7106..7774
                     /gene="hda"
                     /locus_tag="ACJJD2_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HGG7579028.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            7771..8439
                     /locus_tag="ACJJD2_000428"
     CDS             7771..8439
                     /locus_tag="ACJJD2_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7579029.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGITNIIGTQLESGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVDEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            complement(9937..10833)
                     /gene="argB"
                     /locus_tag="ACJJD2_000429"
     CDS             complement(9937..10833)
                     /gene="argB"
                     /locus_tag="ACJJD2_000429"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HGG7579030.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            11003..12133
                     /locus_tag="ACJJD2_000430"
     CDS             11003..12133
                     /locus_tag="ACJJD2_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HGG7579031.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            12204..13055
                     /gene="lgt"
                     /locus_tag="ACJJD2_000431"
     CDS             12204..13055
                     /gene="lgt"
                     /locus_tag="ACJJD2_000431"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HGG7579032.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(13138..13800)
                     /locus_tag="ACJJD2_000432"
     CDS             complement(13138..13800)
                     /locus_tag="ACJJD2_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HGG7579033.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            complement(13898..15691)
                     /locus_tag="ACJJD2_000433"
     CDS             complement(13898..15691)
                     /locus_tag="ACJJD2_000433"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HGG7579034.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKRHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNTESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            15930..17039
                     /gene="proB"
                     /locus_tag="ACJJD2_000434"
     CDS             15930..17039
                     /gene="proB"
                     /locus_tag="ACJJD2_000434"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HGG7579035.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPAKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     NRTDFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDRIEHINHEIIEMAGGAGSSNGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGVAGIEGHFSRMDTVTVYSNATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            17052..18314
                     /locus_tag="ACJJD2_000435"
     CDS             17052..18314
                     /locus_tag="ACJJD2_000435"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HGG7579036.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRLDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KAGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIKAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIIRGVGQVRE"
     gene            complement(18386..21418)
                     /locus_tag="ACJJD2_000436"
     CDS             complement(18386..21418)
                     /locus_tag="ACJJD2_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG7579037.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIYIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPTGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAVCPFENVPSERPSCRVSDTEADE
                     GAFPSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETILGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            21583..22263
                     /locus_tag="ACJJD2_000437"
     CDS             21583..22263
                     /locus_tag="ACJJD2_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000041 - transition metal ion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HGG7579038.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            22292..22651
                     /locus_tag="ACJJD2_000438"
     CDS             22292..22651
                     /locus_tag="ACJJD2_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HGG7579039.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
     gene            complement(23304..23840)
                     /locus_tag="ACJJD2_000439"
     CDS             complement(23304..23840)
                     /locus_tag="ACJJD2_000439"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HGG7579040.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(23874..24230)
                     /gene="folB"
                     /locus_tag="ACJJD2_000440"
     CDS             complement(23874..24230)
                     /gene="folB"
                     /locus_tag="ACJJD2_000440"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HGG7579041.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            24286..24888
                     /gene="plsY"
                     /locus_tag="ACJJD2_000441"
     CDS             24286..24888
                     /gene="plsY"
                     /locus_tag="ACJJD2_000441"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HGG7579042.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALVWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNIVKLLEGRESKIGGSR"
     gene            24965..25810
                     /locus_tag="ACJJD2_000442"
     CDS             24965..25810
                     /locus_tag="ACJJD2_000442"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HGG7579043.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRHVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            26056..27030
                     /locus_tag="ACJJD2_000443"
     CDS             26056..27030
                     /locus_tag="ACJJD2_000443"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HGG7579044.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYILYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVFMGSSEEVAYLDRLHAK"
     gene            complement(27173..27391)
                     /locus_tag="ACJJD2_000444"
     CDS             complement(27173..27391)
                     /locus_tag="ACJJD2_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HGG7579045.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
     gene            27735..27997
                     /locus_tag="ACJJD2_000445"
                     /pseudo
     CDS             27735..27997
                     /locus_tag="ACJJD2_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
     gene            28165..29940
                     /gene="ggt"
                     /locus_tag="ACJJD2_000446"
     CDS             28165..29940
                     /gene="ggt"
                     /locus_tag="ACJJD2_000446"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036374 - glutathione hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HGG7579046.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPSKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            30003..30266
                     /locus_tag="ACJJD2_000447"
     CDS             30003..30266
                     /locus_tag="ACJJD2_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579047.1"
                     /translation="MSNQTKIQAIKQASEQIFAICETPNTALQAIHLILRHGGAGELS
                     WQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDVLPLGSLVLT"
     gene            30421..31671
                     /gene="glyA"
                     /locus_tag="ACJJD2_000448"
     CDS             30421..31671
                     /gene="glyA"
                     /locus_tag="ACJJD2_000448"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HGG7579048.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     ETQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYTVYGA"
BASE COUNT         7714 a         8829 c         7401 g         7790 t
ORIGIN      
        1 gacgattctt gcgtttgcgc gccgcacgtt tcgcggctgc cacgcctgat ttacccaagc
       61 gcaggctcgg atgttgtttc aaagagccta cccgaacagg gcttggcgtg attttgattt
      121 caggtaacgg tggtacgcca aaatcgtttt tcaactttgc acaatgggca acacataaag
      181 caatcaaaga ctttttcata ccttcgtcgc tcccaattcc atcgcgatcg cgtccgcaat
      241 cgcgcggcag atgccccatt tggtcgtctt aaacaaggcc aaatcagtgt cgttactgat
      301 aaaaaacggc tcaaacacaa tgccgcctgc ctgcgcataa gccaggcgcg aatgttgccc
      361 tgcgttatcc ggcttaaagc cgtcttcgcc gcgcagtttc cagccggttt tcttggcaac
      421 ggctttgccc agcacctgac accagcgttt atttttcggc gtggacaagg cttcgatgcc
      481 tgtcgccgtt ttgttcgccg ccgcattggt gtggaactca atcgccacat ccgagccgcg
      541 aatcagcttg accgcatcgc gcaagggcat attgcctttg ccttcgccgt cggtgcgtac
      601 ggtcaggccg taatcgttac gcaggattga agccacaatg ttgcgcatat cctgcgccaa
      661 gtccgcctca cggtcgctgc cgttgactgc gcccgggtcg gtgttactgt gtccggcagt
      721 cagacaaata attttgctca ttaaagcctc cctcaaaatc agattaaaat gcactttcag
      781 aggcttacat tttcaaacgg catggctttt gcagcgggcg aaacagtgtc agtaggcaac
      841 aaaaaagccg cctgttgttc agacggcctt agaatcgttt attttatttt ttcggcaaat
      901 tggcttcagc ttccgttatt gttttacggc attcttgcat tgattttcgg taattttgat
      961 aactttcctt atctaaatca gttgtaccgc ctccaccgct tgttaccata ctcttcatca
     1021 ggatttctgc atcttgcgca gcctgtttgc agacgcggta tgggtcatca tctccattcg
     1081 tgtccgcata ataagcgact gcttgagtaa tattttcacg atactttgca agattttctt
     1141 gattaggtat ttctcctttt aaaaacctct caaaatcccc gccaaggcct tgttgcaata
     1201 cacggaaacg ggcggcgcgt tcaaaataaa aagcctgttt ctcatctgca aattgatatt
     1261 tattggcaaa aaaatactgc tccgcatcag ctttctgcga ttgttcttgc ccacacgctg
     1321 ccaaacccaa cgccagcagc acaaaataaa actttttcat atttttctcc aaaataaaat
     1381 gccatacatc tgcatggcat tccattctaa aacaaattct cctgctccgc ttccttatcc
     1441 gcctgcttta aaattcgcca cacatggcgg tcgcttaggc ggtgtgccaa ggccaaatcg
     1501 ttaacggcct cataagcagg ggtaccgcct gccgtctgcc ggtcaaactg actgcggatt
     1561 ttacggtttc gcaactcata caaggccgtc tcgcaacggg gtataaacag attgcacgga
     1621 gccattgcct ccaccagccg accggccgcc tcactgccga taatctcttc caagtatgca
     1681 acacgggatt gactgttttt cgtataaccc tgccgcaaag gataagtcgt accgcccatc
     1741 aggcgcacca gctccagcgt ttcattaaac ccgatgaccg taatcaacgc ttgtacacta
     1801 tcagggagca gatgcttgac cgcatcaggc aaagccgctt tcgcaatctc aaagagctcg
     1861 tcatccggca aagattcgcc caaattcagc gcaacagaca cgcggctata aagttgcacc
     1921 agctcgccat gcttaccgcg caggttggcc accagtcggg gcataccgct caacaccaag
     1981 ccgcagcccg tttcatcatg cagtcggcgg ataatctcaa gggcgcgcaa gggcaggttt
     2041 tccgcttcat cgaccacaat cagacggccc gaatcgcgca ggcggtcaga tacagactca
     2101 aacaaatcat tcaggctgcc catcgccgat accttcgccg ccgtcgccaa cttgcgcatc
     2161 aagaccaaag ccgtaaagct cggattagcc tcaatcaaga tggccgctgg gtttttctcg
     2221 cagtagtttt tgaccgcctg agtctttccc aatcccgcct gaccgtagat caccactgtt
     2281 tcgccgcctt cgtgcgcatt gcgcatcact tccgcgattc ggcgggtcgt cttagtcgct
     2341 acaaaaccca acaccagttc ttcgcgtcgc gccttacttt tctgcatctc caaaaacgcc
     2401 tcgattttcg tctcgatggt ttcataattg ccgccttttt ccgcataagt gccgttcaga
     2461 tacatactga tggatgccgg cgaagtatcg ataccgcgtg ccagttgggt ttggttcata
     2521 cccgattttt ctttaaattc aaccagtttt tgttgtaatg cttgattaat ttgtttcatt
     2581 tttaatatcc ttgagtttta aacaaccttt aaaggccgtc tgaaatgaaa gagtttcccg
     2641 atttggaaaa acgcctgatc atgctggaag tcgccgttca agacttggaa gaaaggtcgc
     2701 ttaccgattc cttcgtactt gcctggctgc tccagcggat tacccgtcaa gagccgactt
     2761 cgattgagca ggttcgcagt ttccttcaag cgcaggcaaa aacgtttgag cctgattccg
     2821 ttcagcggga acaccttgaa tctttgcttg aaatcgttga atccgcccaa gggctcgctt
     2881 gagtttcaat ttttcaacaa gctcggccga aaacgccgca tttttctgtt tttccatcat
     2941 gttttccttt acatatccgc ctcaaacaag aaaatcccgt cgtccgtgcc cgttttcggc
     3001 aataccgcat actccgcctc gatgacgttt ccgcccaaat gtcccagctc gtcccaagct
     3061 gccgcctgtt ccagtgccgg attgacttcc gcattcgcga gcttgattgc attttccgcc
     3121 cgcttgattt tgccttttcg gcgtttttcc gccagttggt cgatacgcgc tgtcgggaaa
     3181 gcctcgcggg tattgccgtt ggcctgcgcc ttagtaataa acttgccgtc catatcaaac
     3241 acattgaccg ccgacgcatc gctcaaatcg tagctgaccc gtacctcgtc tttgtgatac
     3301 tccgccagct cggttgagaa ataagagttg ctgaacaaat ccagccaacc gcgctgtacc
     3361 tttcgcactt cctgcggcat aaacatcgtc gccagctctt ccgccgacaa catatccggc
     3421 gcgataccgt cctgttccag ccttatttcc cgataagcct tcggcgaata atgcccgccg
     3481 tccggatgtc ggggcagctc gccgtgcgga cggttgttgt aatcatcgat acacttgacc
     3541 acatccgcga taaaacgcga ccagctcggc agttttttca aatatttttg ctgttcctcc
     3601 gttaaatcct tgcctttttc caaagcgtta aacgcacttt ccatcttgcg gtacatcaga
     3661 ttcttcgtgc tactgtccat tcctgcgccc gcaaacgtct catactggcg cgccatctca
     3721 atcagattgt ctttccacca tcgctcgatg atgcctcgac cttgcgggtt gcccgcgata
     3781 cccgtttcat ggcggatacc cagtcgggac gtaatacccg tgatttcatg gtctatcgtc
     3841 ttgccggttt ggccgccgcc gttatccgag taatagataa tcggcaaacc aaaatgcttg
     3901 accccgatac gcagagcatc cgataccgcc acacaacttt cagccaacga aaccgaaaac
     3961 ccgaccacaa accgcgtaca accatcaata atcaccgtca cttccggctt aaacggcctg
     4021 ccgtgtacag ggtgtgccac cttcgcctta aagctgtggc cgtcgccgat ccaaacatcg
     4081 ttcggcttca aagcccccca atcacgtttc acataaggca gcagcgattt ataagccgcc
     4141 cccgttttcc tgccgcgctc ctgcataatt agcgggagct tgtcccaaac gcgccgcacc
     4201 atactcaaat taggcacatc attgaccggc atattttccg cttccgccca ctgcacaaac
     4261 cggcggtagc tgtgcgccag tttcggagcc gaagggatgt tgtgaaaccg cataaacatc
     4321 ggcaaccaac cgtagctctc aatcggcttg accgccttcg tcgtcttcgg agccaaagca
     4381 accaaccgct ctatcgcgtt ttccgctttc aaataagcag aaatccagcc gtctaaagta
     4441 cgttcgccaa ccttcgccga ccggctgcgg tcattggcct tttccaagtt cccaagcgtg
     4501 accgcgtcca atttaccttc tgccagcaag cccaaaaact gagccaccgc agccttggca
     4561 gagcaatcgt attcgtattt aatccccaat accgccgcca ccaccgcaca tcgcgcatcc
     4621 gccaccgacc gttgtttctc gttcaacagc ttggccgctt cagccagtgc ctgagccgac
     4681 atcgccgtcc ccggtctgac ttggggcagc attttcggca tcttctccgc cagctcgtcc
     4741 gactgccgtt tcatgatggc tgctcggatt tcggcaggga gggaagcgat ttcatacagt
     4801 tttttaggac ggcctcttcc tttttgctca aaacagtgtt gccaattatt tttcttggca
     4861 tggtattcaa tcccttgtct atcagttggt aggctcggaa ttcctaattt cgcaatatca
     4921 gatgcagata ttttcatttt ttccgctttc tatttttgct taaatgcggt actcttttgg
     4981 aactatttag caaaacagtt atctatttat agatcttggg aaggttggct tatggtttcg
     5041 tttctcaaaa cgagatggct agatttcttc tgcgggtact ccaatcgctg ctgcaatgat
     5101 tctttcgcct ttcagataag gagcatctaa agctttccct aatgtatttg gtgctaaatt
     5161 agcctcgata gataacgctc tcacagacca gcctgccttt ttaagacgag ccacaatgtc
     5221 agcacgatgc caatcagtca tgctttcttg cttttttttc attctcgcaa ttccttaatt
     5281 aagtaggttt attaaccgcc gtcatttagc aaatgagtga attacattta gcaaaacagc
     5341 ttcatgaaac tcttttgcta aaatattttc tcaaaaacgt aattattttt acaaaatatt
     5401 gattatttga gtaatcttat ttaagcaaaa gagtttcttt ttttgcttaa tgttttgctt
     5461 aaatgagtta aattaggatt actatggata cttttttaga taggctcaaa tttctttggc
     5521 ctcatggggc taagccatct gacatctata acaaaataga aatgtcggct tctggattta
     5581 atagagtttg gaaagaggga gctatcccaa cagccgatta cctagtaaaa attcaagaag
     5641 ttaccggttg tgatttaaac tggctgctga ccggaaaagg cttgccgtat ctcgataaag
     5701 ccaggccgga aaacgccgga gcattctctg taagtagaaa ttctgatgga atcaccgaca
     5761 ctatgggcaa tcgtcgacct gtccgagttt gtattcgtgc cgcgctacaa cgtagccgca
     5821 gcagcagggt atggcgcacc agtcttcggc gaagaacctt tattctgctt ggctttccgg
     5881 aaatattgga ttgacaacta tgtgaccaaa cagccggaaa aactgtctgt aattaccgtt
     5941 aaaggcgatt caatggaggg cgtgctcaat catggggatt ccattctcat caaccacgcc
     6001 gaaactgacc cgcgtgacgg cctatatgtc ttgcgtatag gcaatgacct ctttgtcaaa
     6061 cgtgtgcaac gtataccggg caaactgctt gtaacgtctg aaaatccacg ttacgcaccg
     6121 tttgaaatag atttgagcaa tgcccaagac gacatcgcca tcataggccg tgttgagtgg
     6181 tatggccgga gtattgatta aatccatttt aaaaacctct taaaacagtt ttaaaaattc
     6241 cctaatctcg tcagctttaa acagaaaacc gcgcattccg gcgcggtttt gtgaaaaagc
     6301 tggcgtaact tttccggata caaaaaaacg ccgaaatcca cgtcttccga agatttcagc
     6361 gtttttttac tctatttgtt ccttgtgcaa aaactaacag tcccccacag gaaaacgtcg
     6421 ctctgttctg ccacaacggc gaaatcctgt tgagcggcat caacataaac ctcaaaaacg
     6481 gcgattccct gctgatacgc ggcccgagcg gttgcggcaa aacctcgctg ttgcgcgcgc
     6541 tggcggggct ttggccgttc ggcagcagcg gcaaagtcag ccgtccgccg catcaagaca
     6601 tcctctccct gccgcaacgc ccgtacacgg cacagggcag cctgcgcgac gcggtttgtt
     6661 accccgacat tgacaagcag catcccgagt tagccgaagc catgaacacc tgccgcttgg
     6721 gttatctggt tgataaatta gataaaaccg acgactggca acacaaactc tccccgggcg
     6781 aactgcaacg cgtcgccttc gtccgcgccc tgctttccaa gcccaaaatc gtcctgctcg
     6841 acgaagccac cgccgctttg gacgaaccga ccgaggccct gctctaccgc gcactgaaac
     6901 aaaaactgcc cgacagcatc atcatcagca tcggccaccg cagcacgctc aacgcgttcc
     6961 acaatatgca cctcgatgtc ggcaacgctg cctgcggctg aacgatgccg tctgaagccg
     7021 ttttcagacg gcatcgttca aattggaaag gcgcgcgaaa acaacgtaca ataaacccgt
     7081 ttaccacccc tcggaatgcc gaaccgtgaa ccagcttatt ttcgactttg ccgcacacga
     7141 ctatccgagt ttcgacaaat tcctcggcac ggaaaacgcg gaactggtct atgtcctccg
     7201 acacaaacac ggacagttta tctatgtttg gggcgaagaa ggcgcgggca aaagccatct
     7261 tttgcaggcg tgggtcgcac aggcgctcga agccggcaaa aacgccgcct atatcgatgc
     7321 cgcctccatg ccgctgaccg atgccgcgtt cgaggcggaa tacctcgccg tcgatcaagt
     7381 cgaaaaactg ggcaacgaag aacaagccct gcttttttcc atcttcaacc gcttccgcaa
     7441 cagcggcaaa ggctttttgc tgctcggttc ggaatacacg ccccagcagc ttgtcatccg
     7501 cgaagatttg cggacgcgta tggcgtactg cctcgtttac gaagtcaaac ccttaaccga
     7561 ccaagaaaaa atcgacgcgc tcgccagtat ggcggcggca cgccaagtaa ccgtcgattc
     7621 cgaaattttc gaatacctgc tcaaacactg gcggcgcgat atggacagcc tgatgatgat
     7681 gctcgacacg ctggacaact acgccgtcac aatgggcaaa cgcatcaccc tgccgctttt
     7741 gcgccagctt ttgaaacaac aggaaaccca atgaaaaacc tcgccatctt cgacctcgac
     7801 aacaccctca tcaacaccga ttccgaccac gcctggccgc aatacctcat caaaaaaggc
     7861 ttggttgacg ctgccgaaac cgaagcgcaa aacgaaaaat tctaccgcga ctaccaaaac
     7921 ggttgcctcg acatcgacgc attcctcaaa ttccaccttg ccccgctcgc tcgttacagc
     7981 aaagaagagc tggcagagtt tcaccgcgaa tttatggcgg aatacatcat cccccacatc
     8041 tcgcctatgc agcgtatgct ggtgcagagc caccaaatgg caggcgacga aaccctcgtc
     8101 atctcatcga ccaacgagtt catcatcacc cccgtctgcc gccttttcgg cattaccaac
     8161 atcatcggca cacaactcga atccggttcc gacggccgct acaccggcaa ttacatcggc
     8221 acgcccagcc tcaaagaagg taaaatcacc cgcctgaacc aatggctcgc cgaacgcggc
     8281 gaaacgctcg aaagctacgg caaaacctat ttttacagcg actccaaaaa cgacctgccg
     8341 ctgctgcgcc tcgtcgacga acccgtcgcc gtcaaccccg atgccgagct ggaaaaagaa
     8401 gccaaagaaa aaggctggcc ggttttgaat ttcaaatgac gcaatgccgt ctgaagcccg
     8461 attcggcgtt cagacggcat tgaggctgaa atccaaaaaa ctcaaagcca caggaattta
     8521 tccggaaaaa caaaaaacac aggaattcat cgggaaaaac aacaatcttt ccaccgtcat
     8581 tcccacgaaa gtgggaatct tgatccgtcc gcacggaaac ttatatttcg tcatttgcac
     8641 ccgacataat tcaatacttt attttgcaat aaattaacgg atactgacaa attagattgg
     8701 attaattacc ctattatcca tattgggtta tcgggttgct aattgagcag agcgtagcaa
     8761 accataaagt gagtgtttcc acccactctg catttatagt ggattaacaa aaatcaggac
     8821 aaggcgacaa agccgcagac agtacagata gtacggcaag gcgaggcaac gctgtactgg
     8881 tttaaattta atccactata ctatgaagtg gttattaaat atgataatga gacctattaa
     8941 atttattatg gtaaatacgt tattatttat tgttatatgt agttcatttt ttgatctgct
     9001 cgttcaatta tgtacaattt tatttcatag ccaaaaaata tactttatta cattattttt
     9061 attatttatt tttaattttg ttacaaaatc tatctatatg gcaattattt atcctatttt
     9121 atattttttt acgataaaaa aatattatcc ttactctagg aaagtgataa ttctattatt
     9181 attagcatta tctatatatt ttagttttat ggacttttac tttttttcca tatattcaga
     9241 taaccttagc tatgaaacgg agcctttaca tttatacatc cctattatta ttaatttttt
     9301 ctcactttta gtttctaatt ttattttatc ttttatcaac aagtaaatgt atatacaaaa
     9361 tacaatccaa aagatcctaa gcaaaccacc aatcccacac cacccttacc ggttcaaatc
     9421 cgcacaaaaa cccacatccc gtcattccca cgaaagtggg aatctaggac gtatagtgga
     9481 ttaacaaaaa tcaggacaag gcgaccaagc cgcagacagt acaaatagta cggaaccgat
     9541 tcacttggtg cttcagcacc ttagagaatc gttctctttg agctaaggcg agccaacgcc
     9601 gtactggttt ttgttaatcc actataaaat ctaaagaaac cttttttccc gataagtttc
     9661 cgtgccgaca ggtctagatt cccgcctgcg cgggaatgac gaaatttcaa agttatggcg
     9721 ttatcggaaa aacagaaaat caaagccgga gaatttatcc caaacaactg gatttcaaaa
     9781 aaaccagatt cccgccttcg cgggaatgac ggattttagg tttctgtttt ggtttctgtt
     9841 ttcgcgggaa taacaactta gaaattgccc gaaaccccaa aaacagaaac cggacaaacg
     9901 ggttttccgc caaagccggc attttccgac tttgcttcag gcatcttccc caccgcccaa
     9961 aatcatcgaa ccgataccgg catcggtaaa gatttccagc aaaagcgcgt tgggcaacct
    10021 gccgtcgatg atatgcgtgg ctttcacacc gttgacggcg gcttcgaccg cagaagcgat
    10081 tttcggcagc ataccgccat acagcgtgcc gtcggcaatc agttcatcaa tccgtttcgg
    10141 cgtgagtttg gtcagcagat tgcccgtttt gtccatcaca ccggcgatat tcgtcatcat
    10201 caagagtttt tcagcgttta attcttccgc caatttgcct gccaccaaat cggcgttgat
    10261 gttgaacgct tcgccttttt cacctacgcc gacgggggcg acgacgggaa tgcagccacg
    10321 ttctatcagc cctttaacca aacctgtatc aatgctttcc accgtaccga cctgtccgat
    10381 gtccacgcca ttctgttcgg gcgtatcgat caaaagtttc ttcgccttaa tgaaatgatc
    10441 gtcgcgtccg ctcacgccga ccgcgtgtcc gccatatgtg ttaatcatcg acacgatttc
    10501 tttattgaca tgcccaccca acaccatttc gacaatatcc atcgcctctt tgtcggtaac
    10561 gcgcattcct tggacaaact cccccttttt gccgactttt tcaagcatcg cattgatctg
    10621 cggcccgccg ccgtgaacga tgacgggatg aatgccgacc agcttcagca gtacgacatc
    10681 gcgggcaaac ccttctttca aggcaggttc ggtcatcgcg ttgccgccgt acttgatgac
    10741 ggcgaccgaa ccggaaaacc ggcggatgta aggcagcgct tcggcaagga tacgcgcttt
    10801 gtcggcggcg gaaataatgt tttcagactc cataacggct ccctattgtt gacaatttcg
    10861 gcttatgtta acgccaaacg ccgtctgaaa caatcttcag acggcatccg gcagaccttc
    10921 gggcaggttg aagccttgcg atacgggcgg taaaatcaca gtttatccgg ttcgagaaac
    10981 cggcgacagc aaggactttc ccatgattaa aatcagcacc cgcttcgatg ccggctcggt
    11041 cgtcgtcaaa gacctgaccg atccttccaa catccgcctc gccctgcgtc ccgacaacgc
    11101 ctccgatttt gcacaatggt tctacttccg gctgcaaggc gcggcatatc aaaactgcat
    11161 catgcatttt gaaaacgcgg cagaagccgc ctacccgaaa ggctgggaag gctatcaggc
    11221 gtgtgcctca tacgaccgcc gcaactggtt ccgcgtaccg acttcctacg aaaacggcgt
    11281 actgaccgtc aatcatacgc cgctgtccaa cagcgtgtat tacgcctatt tcgaacctta
    11341 ctccgaagaa cagcatttaa acctcctcgg cgacgcgcaa ggcagcggcc tgtgccgcat
    11401 cgacgacttg ggcagcaccg tgcaagggcg cgacatcaat ctgctgacca tcggcaatca
    11461 ggtcgaaagc gatctgaaaa tctggattac cgcccgccag catccgggcg aaaccatggc
    11521 ggaatggttt gtcgaggggc tgctcggcag gctgctcgat ccgcaagacc cgacagcgcg
    11581 caccctgctc gaccgcgcca cgttctatat cgtccccaat atgaaccccg acggttcggc
    11641 actgggcaac cttcgtacca acgccgccgg tgcgaacctc aaccgcgaat gggaaaatcc
    11701 gactttggaa aaaagccccg aagtgttctt cgtgcgcgaa aaaatgctgg aaaccggcgt
    11761 ggatttgttc ttggacatcc acggcgacga agggctgccc tttatctttg ttgcaggaac
    11821 tgaaggcgtg ccaaactaca atccgcgcat ttccgcgttg gaaacacagt tcaaaaccgc
    11881 ccttttgaac gccagccccg atttccaaga cgaatacggt tacgaaaaag atgcgcccgg
    11941 tcaggcaaac atgaccttgg caacaaactg ggtcggcaac cgtttcaact gccttgccta
    12001 tacgttggaa atgccgttca aagacaatgc caacctgccc gacgacgatt tcggatggaa
    12061 cggtcaacgg tcgttgcgct tgggcgaagc cgcgttgtcc gccatcctca acatcatcgg
    12121 cgatttgcgc tgaaaccctt attgcagaaa tgccgtctga agcatcatgc ctttcagacg
    12181 gcatttgaaa acgaaagccc gttatgatta cccatcccca attcgacccc gtccttatca
    12241 gtatcggccc gcttgccgtc cgctggtatg ccctaagcta catcctcgga tttattcttt
    12301 ttacctttct cggcagaagg cgcatcgcgc aaggcttgtc cgtttttacc aaagaatcgc
    12361 tcgacgactt cctgacatgg ggcattttgg gcgtaatttt gggcgggcgt ttgggttacg
    12421 tcctgtttta caagttttcc gactacctcg cccatccgct tgatattttc aaggtatggg
    12481 aaggcggaat gtcgttccac ggcggctttt tgggtgtagt tattgccata tggttgttcg
    12541 gccgcaaaca cggcatcggc ttcctcaaac tgatggacac ggtcgcaccg ctcgttccgc
    12601 tgggtctcgc ttcgggacgt atcggcaact tcatcaacgg cgaactttgg ggacgcgtta
    12661 ccgacatcaa cgcattttgg gcaatgggct tcccgcaggc gcgttacgaa gatgccgaag
    12721 ccgccgcgca caatccgctt tgggcagaat ggctgcaaca atacggtatg ctgccgcgtc
    12781 atccctcgca gctttatcag tttgcacttg aaggcatctg cctgttcgcc gtcgtttggc
    12841 tgttctctaa aaaacagcgg ccgaccggac aagtcgcctc gctcttcctc ggcggctacg
    12901 gcatattccg cttcattgcc gaattcgcac gccaacccga cgactatctc gggctgctga
    12961 ccttggggct gtcgatgggg caatggttga gcgtcccgat gattgttttg ggtatcgtcg
    13021 gctttgtccg gttcggcatg aaaaaacagc actgaccgcc tgtgaaaaat accgtctgaa
    13081 acatggaaat ccggtttcag acggcatttt tacgtttggt tcatggaaac aaacgcttca
    13141 attcttaccg caacacgcct tgtattttct gccgctgccg cacggacagg gatcgttcct
    13201 gcctgttttt tcgccttccc tgcggacggt ttgcggcttg ttgatgaccg cctgccagta
    13261 gcggtagata tccgccaatg cataaggcaa ctcggattcc agttccgcca gctcgccttc
    13321 tgtgaattgc agacggatag tgccgttgtc ctcttcgtcg taaataccgc ccaatgccat
    13381 gatgggataa aacaactctt caaacgcttc atcatcgacg gcttcaaacc aatcggtcgg
    13441 cacaatatcc aaaccgtaaa gataagcatt gcaccatgtg taaaaatcgc tgccgccgtc
    13501 ttcgttttca tacagccaca aatcgggcag ttttttatcc gacatcgcgg cggttgtttc
    13561 catcgccatt gccaaaacca gccgttcgat ttcggaacgt tcggcggcgg taaattgcga
    13621 ttcgtcgccc aacacttcgg gcagccagtc gagcggtgtc aatttgtccg gcccgctcaa
    13681 cagcgccgtc ataaaacctt gaacctcgtc gcaacgcatc gtgttgcctt gttcgctttt
    13741 ggcatccaac aattcgctca accgccgttt ggatgcttcg gtaaattttt gggaatccat
    13801 catttaacct tttaaaatgg gtttaatacc taattataat cgcaatatgc cgtctgaagc
    13861 ctttttctgc ttcagacggc atcgtctgtt ttcacgctca aatcgtaccg ctgccttgcg
    13921 ctttcggttt ggcggcacta aattccagtt tgctcaaggc ggaaaggtag gctttggcgg
    13981 tggcaaccaa aacgtcggta tccgcgccct gaccgttgac gacgcggttg ccgcgtgcca
    14041 gacggacgct ggtttcgcct tggctttccg taccttgcgt gacggcattg acggaataaa
    14101 tctgcaaagt cgcgccgctt tgcgccacgc tttcaatcgc tttgaaaatt gcatcaaccg
    14161 gaccggaacc ggttgcggaa gcgcgttttt cttcgccttt gatgctgaac acgatgtcgg
    14221 cgcgcggctc ttcgccggtt tcggtgctga ttttttggga aatgaatttg tagctttcgg
    14281 tattcatatt gcccatttcg tccgacacca gcgcgtgcag gtcttcatcg aagatttcgc
    14341 gttttttgtc ggcgagttct ttgaagcgtg caaatgccgc gttcagtgcc tcttcgcttt
    14401 ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc gttgcggccg gacaatttgc
    14461 ccaagctcaa tcggttagcc gaccaaccga ccgattcggc agacataatc tcgtaagttt
    14521 cgcggtgttt cagcaccccg tcctgatgga tgcccgattc atgcgaaaag gcattggcac
    14581 cgacaatggc tttgttgggc tgcacgggat agcccgtaat ggtggacacc agtttggacg
    14641 aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc gaacaagtcg tggcgcactt
    14701 tcaacgccat cacgatttct tcaaccgaag cattgcctgc acgttcgccc aagccgttga
    14761 cagtacattc cacctgacgc gcaccgcctt ttaatgcggc aagcgaattg gcaaccgcca
    14821 agcccaaatc gttgtggcag tgtgccgacc aaacgacttt gccgccgttg ggcgttttgg
    14881 caatcagttc gcggaaaaat tcttcggttt tgtacgggat ggaatagccg acggtatcgg
    14941 gaatattgat ggtggtcgcg cccgcttcaa ttaccgcgcc gcagatttcg gcaaggaaat
    15001 cgatttccga acgcaacgcg tcttcgcagg aaaattccac atcgtcggtg tattcacgag
    15061 cgattttcac cgctttgacc gccgcctcaa tcacctgctt cggcttcatc ttcaatttgt
    15121 actccatatg gatggggctg gtggcgatga aggtgtggat gcgttttttc ggcgcgggcg
    15181 caacggcctc acccgcctga cggatgtccc gctcgatggc gcgggacaat gaacagaccg
    15241 ttgatttggt aatggttttc gcaatcgcat tgaccgcctc gaaatcgccc gggctggcag
    15301 cggcaaaacc cgcttcgatg atgtccacac ccaatttttc cagctggcgg gcgacgcgga
    15361 ttttttcctc tttggtcata gcagcgccgg gcgactgctc gccgtcgcgc agggtggtgt
    15421 cgaaaatgat aacgcggttg gcctgtgtca tttctgttct ctccagagat tcgttttttt
    15481 gtaaaaaagc attcaaatcc agcggcctgc cttgcgattc ggcaagtgca gtcaattttt
    15541 gcagctgcgc caaaggcagc gagccgcgcg tgcgccattt gtagatggcg gcagttgtcg
    15601 cggcattttc gggatcgtgc cgtttcaacg cttcggcaag cgcgttcacg ccgccgaaat
    15661 aggcgaccag acggtctata tctaattgca tggtagtcct tgtctaaaat caatctgccc
    15721 gcagcagaaa tatggacagg attatacgca ttttagacaa aacggcaata tcaatttgaa
    15781 aaaatctcaa taactcatca tagattttat taattttata cattttgtct attttattgc
    15841 aggcccagcg caattgttga caattgcggc agaacagggc aaattcgaca gcaacaaacc
    15901 aaacgctaca aacgcaaaga acagaaacaa tgaaatacaa gagaatcgta tttaaagtcg
    15961 gcacatcttc gattacccat tcggacggca gcctctcgcg cggcaaaatc caaaccatta
    16021 cccgccagct tgccgcattg catcatgcgg gacacgagct ggtcttggtt tcatccggcg
    16081 cggttgcggc agggttcggt gcgctgggtt tcaaaaaacg tccggccaaa atcgccgaca
    16141 aacaggcttc cgccgccgtc gggcaggggc tgctgatgga agaatatacg gcaaacctgt
    16201 cttcagacgg catcgtgtcc gcgcaaatcc tgctcaaccg caccgacttt gccgacaaac
    16261 gccgctacca aaatgccggc ggcgcgcttt ccgtgctgct gcaacgccgc gcgattccca
    16321 ttattaatga aaacgacacg gtttcggttg aggagttgaa aatcggcgac aacgacacat
    16381 tgagtgcgca agtggcggcg atgatacagg cagacctctt ggtgctgctg accgacatag
    16441 acggtcttta cacgggcaac ccgaacagca atcccgatgc cgtacggctg gacagaatcg
    16501 aacacatcaa ccatgaaatc atcgaaatgg caggcggcgc gggctcgtca aacggcacgg
    16561 gcggtatgct gaccaaaatc aaagcggcga cgattgcgac cgagtccggc gtaccggtct
    16621 atatctgttc ctcgctcaaa cccgatgcgc ttgccgaagc ggcagataat caggcggacg
    16681 gctcgttttt cgtcccccgc gccaaaggtt tgcggacgca gaagcaatgg ctggcgttct
    16741 attccgaaag ccggggcggc gtttatgtgg acgaaggtgc ggaacacgct ttgtccgaac
    16801 agggaaagag cctgctgatg tcgggcgttg ccggaatcga agggcatttt tcccgtatgg
    16861 acaccgtaac cgtgtacagc aacgcaacca aacagccttt gggcaaaggg cgcgtccttt
    16921 tcggctctgc cgccgccgaa gacctgctca aatcgcgcaa agcgaaaggc gtgttcatcc
    16981 atcgggacga ttggatttcc atcacgcccg aaatacgcct gcttctgacc gaattttaga
    17041 aaaggaaacc catgtcaaac acacaaaaac agcttgccct tgccaaagcg gcaaaaaaat
    17101 ccgtcaacac ggcggatacg gaagaaaaaa accgcgcgct gcttgctatg gcggacagtc
    17161 tggaagcggc ggcggcagat attttggcgg caaaccgttt ggatttggaa gcggcggcag
    17221 gcaaaattcc cgaaagcatg accgaccgcc ttttgttgga cggcaaacgc atttgcgcga
    17281 tggcggacgg catcagggcg gttgccgcgc tgcccgaccc cgtgggcgaa atactggaaa
    17341 cctcgactct gcccaacggc ttggaaatcg tcaaaaagcg tgtggcgatg ggcgttatcg
    17401 gcattattta cgaaagccgc ccgaacgtta cgtccgatgc ggcggctttg gcactgaaaa
    17461 gcggcagcgc ggtcgtactc cgcagcggca aagatgcatt ccaatccgca cgcgccatcg
    17521 ttgccgcact caaagccggt ttggcgcaaa cccgcatcga ccccgacgcg ctccagttga
    17581 ttgaagacac cgggcgtgag ggcagttacg aaatgatgag ggcgaaagat tatctagacc
    17641 tgctgattcc gcgcggcggg gcggggctga tacgggcggt ggttgaaaat gccgtcgtgc
    17701 cggttattga aacggggacg ggcatcgtcc acatttatat cgacaaggac gcggattggg
    17761 acaaggcgct ccgtatcgtg tacaacgcca aaaccagccg tccgtccgtg tgcaactcga
    17821 tggaagtgct gctggtgcat gaagacattg ctgccgactt cctgcccaag ctcgaacggc
    17881 tgttggttcg cgaccgtata aaagccggac tgccgcccgt ccgcttccgt ttggatccgc
    17941 aggcggcacg gcatatcggc ggcgaagcgg cgggtgcaga cgatttcgat accgagtttt
    18001 tagactacat cctcgccgtg aaaaccgtcg cttcggtcga agaggcggtc gggcacatcg
    18061 aaacgcacgg cacgcaccat tcagacggca tcgttaccga aaaccgccac gctgcggact
    18121 atttcacgac ccatatcgat tctgccgccg tgtatgtcaa cgcgtccacg cgctttaccg
    18181 acggcggcga attcggcttg ggttgcgaaa tgggcatctc cacgcaaaaa ctccacgccc
    18241 ggggtccgat gggtttgaaa gagctgacaa gctataaata catcattcgg ggcgttgggc
    18301 aggtcaggga ataatccgca ttcaaacgtc cgataaaaat gccgtctgaa acagtcttca
    18361 gacggcattt ccatttgcaa aaaaatcaag cattgtccaa ggggacgaga atcgtacggt
    18421 tgccgttgtg ttccggcgcg gatacgatgc cttccgcctc catctggtca atcagccgcg
    18481 cggcgcggtt gtagccgata cgcaatgcgc gctgcacgcc agaaatgctg gctttgcgcg
    18541 ttttcaaaac aacggacacg gcctcatcgt acatcggatc ggtttcgccg tcgccgctgc
    18601 gcccgatgcc gggcagctct tcgctgccgc cgccgctcaa aatatcgtca acatagtccg
    18661 gttcgccaaa ctgcttcaga tattcgacca cgcggtgcac ctcttcatcc gaggcaaacg
    18721 cgccgtgaac gcgctgcgga taggcagtac ccggcggcag gaacagcata tcgccctgac
    18781 cgagcaggtt ttccgcgccc atttggtcga gaatcgtgcg gctgtcgatt ttgctggaca
    18841 cttggaacgc gatacgcgtc gggatgttcg ccttaatcag acccgtgatg acatcgacgc
    18901 tggggcgttg tgtggcaagg ataagatgga tgcctgccgc gcgggctttt tgggcgaggc
    18961 gggcaatcag ttcctcgatt ttcttgcctg ccgtcatcat caaatcggca aactcatcga
    19021 ccaccaccac gataaacggc agtttttcca aaggttcggg atcgtcgggc gtgaggctga
    19081 acgggttgcc gattttctcc ccccttgctg cggcttcggc gattttttga ttgaaacccg
    19141 caagattgcg cacgcccata aagctcatca ggcggtagcg tttttccatt tcgttaacac
    19201 accagttcag cgcgtttgcc gccagcttca tatcggtaac gacaggggcg agcaggtgcg
    19261 ggatgccttc gtaaatgctc aattccagca ttttcggatc gatcataatc atacgcacgt
    19321 cttccggcgc ggctttgaaa agcatagaca gaatcatcgc gttgacaccc accgatttgc
    19381 ccgaaccggt cgtgccggca accagcaaat gcggtgcttt gcccaagtcg gttacgacgg
    19441 gctgtccggt gatgtcctga ccgagcgcga gcgtcagctt ggatttggat tcggcaaact
    19501 cgggcgaatt gaagatttcg ctcaggcgta tcatttggcg tttcgggttc ggaagttcca
    19561 aacccataca ggttttgccg aggatggttt cgacaacgcg gatggaagcc acgccgagcg
    19621 aacgcgccaa gtctttttcc agatttagaa cggaattgcc gcgcacgccg acatcgggtt
    19681 cgatttcata acgcgtaatc acggggccgg aataagaatc gacaaccttg accttgactt
    19741 tgaactccgc caatttttct tcgatggtga tgctgttttc caacagttct tcttcggttt
    19801 gcgtcgcctc gggattgaac agcggcggca gaagcaggtc ggttgtcggc aggtgttcgg
    19861 ataccgcacc ggtttcttca gatgggaacg ccccttcatc cgcttccgta tccgataccc
    19921 ggcaggacgg gcgttcagac ggcacatttt caaacggaca aaccgcctga ctgtcatgcc
    19981 cgaacgcttc ggtttccgac agatattgcc cgtttgaccg ctctgccgca ccttcactgc
    20041 cgtcatctgc aatagcggcg gtttcctcct gccaacctcc attcaaaaca tcatcggcaa
    20101 gatggtcggt ttcagcaatg cggctgcgtt gcgcctgctc gaatcctgtc ggcggctcat
    20161 aggtacggtt gtagatttcc gatacgggag gcggcggcgg aatatcgatt gcgggcatgg
    20221 gaactttcgg cacttcgggt ggttcgacca cccaagcatc gggcgcagca ggttcttcaa
    20281 tatagatatc ggcagcttca tcataaaccg gaccgccgta tcccacagac gaaacggttt
    20341 ccgtgaaaac attttcggtt tcagacggca tttcgacatc ccgtttcccg acaaccgtcc
    20401 gactttccgg aatcaggcgc gaaatccgcg cctccgcaga aaccgttgcc ttgttcggtt
    20461 ctttcaaatt gacggaaacg cggcggcagg catcgcggac ggctgtgccg tctgaaacgg
    20521 actgtccttg ggaaacatcc ggggattttg cctccgcctg ccctgcatga cggcggaacg
    20581 gcgcattccg tgcattttcg gctttgactg cagaaaaggc agacggatgc tgcttctcaa
    20641 aatacggctc aaatccgtaa tccgcagact cggaaaacgc ttctttgtcc gcatcgaaca
    20701 tacgggaata cgtgcgttga agcacagggt cgtccaaacc gataatctgt agcccttcca
    20761 tcggggtatc ggacacgcgg actttgggga ccgctgtttc gtttttctca aatgcatcga
    20821 tatagcgttt tttcgtttcc cttaaagccg cgctgtttaa agcacgcgtt gcttcttcca
    20881 aagtgatttc cttaaaaacc ggacggacgg gcgaaatttc gctttcagac ggcatcaacc
    20941 cttcagcaat actccggtcg aatgggatgc ggcggttgtc gattacggca gttgcaatgt
    21001 cttccgtatc ggcagcctct tcctccgcag cttctgcttc ttccgtttcc gcttcttccg
    21061 tcccgtttcc actgtctgaa tatccgtcgg atgcggtcgg aacatccgca cggtttgcag
    21121 aagcaggcgg aacgggcctg tccggttcgg attcgtgcgc cagatagttt cggcagaaac
    21181 ggacgacacc gacaaacagc caatacactg ccgttttgac ggcatggaaa agcatcaggg
    21241 caagttcggg aaaatcgggc ataccgtctt tgatttcagg cagctccgcc tgtttttccc
    21301 ctttcttttc ctgccacgca gaaacctcgc gcatccactc gcgttcggat tgtgcgcgga
    21361 caaaaaacaa gccggcaagc gcaagcaaca aaataacgat caaaactatc caaaacatat
    21421 gccgtttccc gcaagacaaa cgattaaacg ggtttatttt aacgtgtttc catcccaaaa
    21481 aaaacaaccg gtcggcaatt ctgccgaaac cgattcggct ttcggtttgc ccccgccgac
    21541 agtataatag ccgtcctttc ccttaatctt tgcggcattg ccatgatttt ccaaacagtc
    21601 tggttttcag atatggtact gtcggtttcg tggattgtcc ttatcctgat actggcagct
    21661 tccgcgccgt ccgcattccg ctcgcttgcc cgctaccgtt ccgcccttcc cctgtgtacc
    21721 gtaatttttt ccgcagcatg gtgtctgaac gcctctgccg gcggcggaca gcttgcccag
    21781 atgaactacc atctgctcgc cgtcaatctg gttgcactga tggtgggcac ttccgccgcc
    21841 ttttggcttg ccgcgctgct gatgctgccc tactgcctgc tgtttgccgg ttctgccggc
    21901 gcatatccgc cgaacgcttt ggtgctgatt ctgcccgcgc ttgccgtcaa ccgcctgtcg
    21961 cgtatgctgg tcaaccgcct gccgcccaat attttcatct ttattttcgt caacggcttt
    22021 ctcgcttccg ccgccggcat tctgttgacc gggctggtgc tgaccggtat tttggatgct
    22081 gcaaacgctt ttccgtccga aatattgtgg acgaccgccc tgcccgtctt tattctgctg
    22141 gcgtgggcgg aagccttcct cagcggcatt tcaactgcca tatttgttgc actgaagccc
    22201 cattggatca acactttcga cgacaaccgc tatctgaagt ccgaccgcgg catatggcgg
    22261 tagccttcag acggcatagg cagacaaaac catgctttcc aacatcatcc ccctttccat
    22321 cggtgcggca ctcggtgcaa cggcgcgttg gctgctcaac ctcgccgttc ctgccgccat
    22381 gtctcccgcc acgggcaacc tgtttgccaa ctggacgggc gcgctgctca tcggcatctt
    22441 tgccgaaacc atcaatcacc cgcaatggaa gctgctgctg attaccggtt ttctcggcag
    22501 cctgaccacg ctttccggat tttcactgga aaccgtaacc ctgctccaat cgaatcgtcc
    22561 tgcttcagca cttgccaata ttttcctaca cacggcaggt tcgctgctgc tgacttggct
    22621 cgggctgaag ataggggcgg cagtcaaata accgcaacaa attgcctccc tttgttttga
    22681 cataatctat aaattagctt cgcttgttta aatactggct gtgccaatta tagtggatta
    22741 acaaaaatca ggacaaggcg acgaagccgc agacagtaca gatagtacgg aaccgattca
    22801 cttggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcgagg caacgccgta
    22861 ctggtttttg ttaatccact ataccgttct caaattcaaa ttgggctttt aggtctataa
    22921 caaagaaaaa gccttggtag gataaaccta ccaaggcttt ttcttaaaaa aacgctctat
    22981 taccgtgcct aaaaatgcaa aaaagtaacc gtcataaccc ttttgccaaa atcaatatca
    23041 tcatccgatg aatgaattga cggtatataa gaaagaatta ataagctcat aaaccggtaa
    23101 gaaaaatcag taacaaagat attcattatt aaccatttta aaaattatca tgttcgtttg
    23161 ggtaattatt ataccctttt ccctcttatt actaaagcac gaatgacttt aaaggacgcg
    23221 cccagagaca agccgaaaag gcatatctca tccgccaaac aaaatgccca ccgacttact
    23281 ccggcaggca gttcaacacc ctgtcaatcc ttcatcagcc agtattgcaa accgattaat
    23341 gtcttgccgt ctttaatttc atcgtttgct aatgcctgac ggacttcttc tttcgacatc
    23401 aatacggttt ccgtaatctc gtcttcgtca ttggcaagcg tactgcccaa acgcacgcct
    23461 tccgcttcga acagatacat tttttcgttg caaaaaccga ccgccgtata aaaactgtaa
    23521 agcaggcgca cgctgtcggc aacataaggc gtttcttcag ccagttctct cagcgcacac
    23581 gctgccatat cctcgcccgc cacatccagc ttgcccgcag gaagttccaa tgtcgcctga
    23641 tttgccgcat accgccactg ccgtaccaaa acgacctttt catcatccgt taccgccaac
    23701 acgcacgccg ctcccggatg acggatgacg atacgctgcc cttcattgcc gttgggcaac
    23761 ctgaccttat ccctgctgat gctgacaaaa ccgccctcgt aaatggtttc gccgcctaat
    23821 tttacttccc tcaaatccac ttcatatctc ctttccgttt cctattctgc cgttcaatct
    23881 tcacgcttgc cgcgctcgat ttccacgcca acctcgcgca cgccttccaa aatacccggc
    23941 ttgacgattt tcacgcgtac ccacaccgcg ccgaaatatc ccaaaaccaa atcggcaata
    24001 tattccgcca acgcttccaa aagcaggaaa tcctgttctt tcagatgtcg gcgcagtgtt
    24061 tcgcatacct cggcataatg taccgtattg gcaatatcgt cgtccgaacc cgctttctcg
    24121 ggaacgccga tgtccaaatc gacaatcagg gtctgcaacc gttcgcgttc ccagccgtac
    24181 acgccgataa gcgtatccgc cttgatgccg tgcaaaaaga ttttatccat aatccgcccc
    24241 gttttttgct aaaataaccg caccattcta agtaaagtac cacaaatgtt caacataccg
    24301 gctgttgccg tttcctatct gatcggctca ctttctttcg ccgtcatcgt ttccaagtat
    24361 tacgggatgg acgacccgcg cacctacgga tcgggcaatc ctggggcgac caatgtttta
    24421 cgcagcggca aaaaaaaggc ggccgcgctg acgctcttgg gcgatgccgc caaaggttta
    24481 gttgccgttt tgcttgcacg cgtgcttcaa gaaccgctcg gtttatccga cagcgcaatc
    24541 gctgccgtcg cactcgccgc gctggtcggg catatgtggc cggtgttttt cggatttaag
    24601 ggcggcaaag gcgtggcaac ggcattgggc gtgcttctgg cactctctcc cgcaactgcc
    24661 ttggtctgcg cgttggtttg gcttgttatg gcattcggct tcaaggtgtc ctcccttgcc
    24721 gcattaaccg ccacaatcgc cgcccccctt gccgcactgt tttttatgcc gcatacttct
    24781 tggattttcg caaccctcgc aatcgccata ttggtgttgc tccgccacaa aagtaatatc
    24841 gtcaagctgc tcgaaggcag agaaagcaaa atcggcggca gccgctgatt tcccatccat
    24901 ccctgtttat gccgtctgaa ccccgcttca gacggcatcc gaatatcccg ccgttttacc
    24961 gactatgctc agttacagac acgcattcca cgccggcaac cacgccgata tgctcaaaca
    25021 cttcaccttg tttttagtgc tgcaatattt caaccgcaaa gacaagccct actggtacat
    25081 cgacacgcac ggcggcgcgg gtgtgtacaa tctcgaaggc agcgaggcac aaaaagtcgg
    25141 cgaataccgg caaggcatcg ccctacttcg acaagcaaaa aacctgccaa ccgagttaaa
    25201 cggctttatc gcgcacatac aaaaaatcct gccctcgccc gaactttact gcggttctcc
    25261 gtggctggcg caatcgctga cccgcgtcgg cgacaaatta cgcctgtttg agctgcaccc
    25321 caccgacttt gtccatctgc aaaacaatat gggcgaagca ggattgggca aacgcggaca
    25381 agtgttgcgc gaagacggtt acaaagggct gatttccctg ctgccgcccc cgccgcgccg
    25441 cgccaccgtc ctcatcgacc cgccctatga ggaaaaacag gactaccggc atgtaacgga
    25501 aacgctgaaa gccgctttaa aacggtttga gtccggctgt tatctcattt ggtatccctg
    25561 cctcagccgc gaagaaagcc gcaagctgcc cgaagaattg aaaaaactcc tgcccgacaa
    25621 ctaccttcac gccgaacttc acgtccacgc gccgaaagcc gacggtttcg gtatgcacgg
    25681 cagcggaatg ttcgtcatca atccgcccta tctgttggcg gaacaattgg cggcaaacct
    25741 ccccgccctg acgcggctgc tggcgcaaga cgaaggcgcg cgctaccttt tggacagcaa
    25801 aatccgctga ccccgatgcc gtctgaaacc cttcagacaa catctcccgt caaataaaca
    25861 aaaccggacg atataccggc agtcggcact tttaagaata aatatcccct catccgcctg
    25921 ccgcgttccg acttgcccca tgccgttttt ttacactaca atcccctaga ctatcctgca
    25981 aaacgcacca aaggaatacg ccacaataac ctgccgccct tcagacggca caaacctttc
    26041 cgaaacgagc aaactatgga cacactgacc cgattcctcc ccgaacacct gcaacaaaac
    26101 cagctgcccg aagcactcgg cggcgtttta ctgtccgttg tttccgcctg caccgaaatc
    26161 aacgccaaag tccgcctcgg cgcactggcc ggcgtattgg gtatggcggg cacgggcaat
    26221 attcagggcg aagaccaaaa aaaactggat gttatcgcca acaacatcat gattgacaca
    26281 ctcaaagcca accctgccgt tgccggtttg gcaagcgagg aagaagactc tttcgtaagt
    26341 gccggtgaaa acggacgcta tctcgtccta ttcgaccctt tagacggatc gtccaatatt
    26401 gatgtcaaca tttccgtcgg tacaattttc tccatccttg aaaaacccga aggcgcattg
    26461 gcaaccgaat cattccttca aacgggcaga cagcagcttg ccgcaggcta tatcctctac
    26521 gggcctcaaa cccagctcgt attcacattc ggacacggcg tatatatgtt cacgctcaat
    26581 gccgaaaacg aatttgtgct gaccaaagaa aaaccgaaag tacccgaaag taccaaagaa
    26641 tttgccatca atatgtccaa ccgccgccac tggctgcccc ccgtccaaca atacatcgac
    26701 gagctcttgg cgggcgaaac cggcacgcgc ggcaaaaact acaatatgcg ctgggtagcc
    26761 agcatggttg ccgaaatcca ccgcatcctg atgcgcggcg gcgtgttcat gtatccgcaa
    26821 gacaaacgcg acccgtccaa acccggcaaa ctgcgcctga tgtacgaagc caaccctatg
    26881 agcctgatac tcgaacaggc gggcgcatcg gcaagcaacg catatcaagc catgctcgac
    26941 atacagcccg aaaacctgca ccaacgcgtc gccgtcttca tgggcagcag cgaagaagtc
    27001 gcctatctcg accgcctgca cgcaaaatag acagacagcc gttcacacaa gtacacggcg
    27061 gcggcaatcc gataccgccg ccgttatttc aaacagcaca agccttctgg tcaaatgaca
    27121 aaaatgccgt ctgaaaacat ttcagacggc atttcaaaaa ctcaaacccg aattattttc
    27181 ccgctgcttt ttgcaggatg gcgtacaact cgtctttcag tttcaatttg gcttttttca
    27241 gctcatcgat ggtttccgca ccgctggtaa ccggattgtt gaccagaccg gtaattttat
    27301 cgtccagctc gttgtgttcg tcgaacagac gggcgaagcg ggaattttcc tgtttcaatt
    27361 tggaaatcaa atcacggtat tctgggaaca tatcgctttc ctctcttggt ttacggttaa
    27421 aaagtcaaac tgaatcttta cattaattat aacaaagata atatttttat ccagtgtttt
    27481 atcggatacg gcaaaatttt cttttaacac cgccgtccgg ttgataaaaa cgttgacaat
    27541 atcacgcttt acgcataaat tttcagcctt tcctactgta tagtggatta acaaaaatca
    27601 ggacaaggcg acgaagccgc agacagtaca aatagtacgg aaccgattca cttggtgctt
    27661 cagcacctta gagaatcgtt ctctttgagc taaggcgaga caacgccgta ctggtttttg
    27721 ttaatccact atatatgaaa ggcacgcccc agtttcccca atgtggattt tcagcgcgtg
    27781 cagtagaggt gctgacccaa ttggcagacc ctttgctttt gttaatatcc tagaaaaccc
    27841 agaaattcgc agtactctac cactcatcgc caatcggcca acctttccac agctttgggt
    27901 taatggtgag ttaatcggtg gtagtgatat tatcctacaa atgtaccaat caggtgagct
    27961 aaaaccactc attgaagagc atagcccaaa ggtctgatta cttaatatct taaaataaat
    28021 atcaaaaaag actgctgatg acattagcgg tctttttttg atggtcaaga ttgatagttt
    28081 ggattgaatt atttagccat attaaataca ataatcagca tgccttgtat gaatcatcaa
    28141 tcaaactcag gcgaaggagt gcttgtggct aaaacatatt tattgactgc attgataatg
    28201 tctatgacaa tctctggatg tcaagtcatc catgccaatc aaggtaaggt taatactcat
    28261 tctgctgtca tcacaggtgc agacgctcac acgcctgaac atgcaacggg actgatcgaa
    28321 caaaagcagg tgattgcaag tgattttatg gtagcgtcag ccaatccatt agcaacacaa
    28381 gctggctatg atatcttaaa gcaaggcggt agcgctgcag atgcgatggt ggcggtgcag
    28441 acgacactaa gcttggtaga gccacagtcg tcaggcttgg gcggtggtgc atttgtgttg
    28501 tattgggata ataccgccaa aacattgacc acatttgatg ggcgtgagac ggcaccgatg
    28561 cgtgcgacgc cggaattatt tttggataaa gatggtcaac cattgaaatt tatggaagcg
    28621 gtggtcggtg gtcgctcggt gggtacgcct gctatcccta aactgatgga gacaatacat
    28681 cagcgatacg gtgtattgcc ttggggaaaa ttatttgata caccgatccg cttggcaaaa
    28741 caaggctttg aggtgtcgcc aaggcttgcc atctcggttg agcaaaatca gcagcatttg
    28801 gcacgctatc caaaaacagc cgcttatttt ttgccgaatg gtgtgccgct acaagcaggc
    28861 agcttgctga aaaatttaga atttgctgac agtgttcagg cgttagcagc tcaaggtgca
    28921 aaagctctgc atactggtaa atatgcccaa aatatcgttt cagttgtcca aaatgctaag
    28981 gataaccccg gtcaattatc cttacaagat ttatctgatt atcaagtggt ggaacgcccg
    29041 cctgtttgtg tgacttatcg tatttatgaa gtatgcggta tgggtgcacc aagctcaggt
    29101 gggattgctg tgggtcaaat tttggggatt ttaaatgaat tttcacccaa tcaggtgggg
    29161 tatgatgctg aaggtttacg tctcttgggc gacgcttcta ggcttgcgtt tgcggatcgt
    29221 gatgtatatt tgggcgaccc tgattttgta ccagtaccca ttcgccagtt gatttctaaa
    29281 gactacctaa aacatcgcag ccagctgctt gagcagtcgg ataaggcatt gcctagcgta
    29341 tctgcaggcg attttattca tgagtgggtg tcctcacaag cgattgagtt accttctacc
    29401 agtcatatat caattgtgga taaggcgggc aatgtgctat caatgacgac ttccattgaa
    29461 aatgcgtttg gctcaacttt gatggcaaat ggctacctgc tgaataatga gctgacagac
    29521 tttagttttg agccaataaa gcagggcaaa caggtcgcca atcgtgtcga gcccagcaag
    29581 agaccacgct cctcaatggc accaaccatc gtatttaaag caggcaagcc ttatatggca
    29641 atcggctccc caggtggtag ccgtatcatt ggctatgtcg ctaagacgat tgtggcacat
    29701 agcgactgga atatggatat ccaagatgcc atcagtgcac ccaatttatt aaatcgcttt
    29761 ggtagctatg aactagaaac gggtacaacc gccctccagt ggcaacaagc attaaatgat
    29821 ttgggctata agactgacgt gcgtgagcta aattcaggtg ttcaagccat tattatcgag
    29881 ccaagcaggc tggttggtgg tgccgatcca cgccgagaag gtcgagtgat gggtgattag
    29941 aggtgaagct tgtattttgt gaatttgacc gcattaagtt aatattaaaa tagggggaaa
    30001 ttgtgagtaa tcaaacaaaa atacaagcca tcaagcaagc ttctgagcag atcttcgcaa
    30061 tttgtgagac gccaaacaca gcattacaag ccattcatct gattttaaga catggtgggg
    30121 caggagagtt gtcttggcaa gtggtgtatc agcgggttat ggctgataaa gatgtggttg
    30181 gtgctggtta tttgattgat tttgcacaaa ctgccgaaaa tttaccattt gatgtattgc
    30241 ctttgggtag ccttgtacta acataaaggt aatgagacgc taaaaaccag catgttaaat
    30301 aaattacctg ataatgccaa agaaaattta cgcattatgg actatctgcc ttaggttttg
    30361 aagtattttt ttatacaaaa aacactcatg ataccctgat tacacaaagg agccgagaac
    30421 atgttttcaa aaagcgttac cctcgcacaa tatgaccccg atttggcagc agccattgcc
    30481 caagaagacc aacgccagca agaccacgtc gagctgattg cctctgaaaa ctacgtcagc
    30541 tgcgccgtaa tggaaacgca aggttcccag ctgaccaaca aatacgccga aggctacccc
    30601 ggcaaacgct actacggcgg ctgcgaatac gtcgatattg tcgaacaatt ggcgattgac
    30661 cgcgtcaaaa aactgttcgg cgcgcagtac gccaacgtcc aaccgcactc cggctcgcaa
    30721 gccaaccaag ccgtgtacgc ttccgtttta aaaccaggcg acaccatttt gggtatgtct
    30781 ctggcgcacg gcggccacct gacccacggc gcgagcgtta atatctcagg caaactctac
    30841 aatgccgtta cttatggttt ggatgaaaac gaagtgctcg attatgccga agtcgaacgc
    30901 ctcgcgctcg aacacaaacc caaaatgatt gtggcgggtg cgtctgccta cgcgttgcaa
    30961 atcgactggg caaaattccg cgaaatcgcc gataaagtcg gcgcatacct ctttgtcgac
    31021 atggcgcact acgccggact gattgccggt ggcgaatatc ccaacccggt gccattctgc
    31081 gacttcgtta ccaccaccac ccacaaaacc ctgcgcggtc ctcgcggcgg cgtaattttg
    31141 tgccgcgaca atacccacga aaaagcgttg aactcttcca tcttcccaag cctgcaaggc
    31201 ggcccgctga tgcacgttat cgccgccaaa gccgtggcgt ttaaagaagc attgcaaccc
    31261 gagttcaaac aatacgcaaa acaagtgaaa atcaatgcag ccgccatggc ggaagagttg
    31321 gttaaacgcg gtttgcgcat cgtttccggc cgcaccgaaa gccacgtttt cctcgtcgac
    31381 ctgcaaccga tgaaaatcac cggtaaagcc gccgaagccg ctttgggcaa agcgcacatc
    31441 accgtcaaca aaaacgccat cccgaacgat ccggaaaaac ccttcgttac ctccggcatc
    31501 cgcatcggct ccgctgccat gaccacacgc ggttttaacg aagccgacgc gcgcgtattg
    31561 gcgaacttgg ttgccgacgt attgtctaac cccgaagacg aagccaacct cgccaaagtc
    31621 cgcgaacaag taactgcttt gtgcaataaa tacaccgttt acggcgcgta agccttttta
    31681 aaaatattcc gccaagcaat ccaatgccgc ctgaaatctc acaatgtttc aggc
//
LOCUS       DBBZXW010000010        31033 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.010, whole genome shotgun sequence.
ACCESSION   DBBZXW010000010 DBBZXW010000000
VERSION     DBBZXW010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 31033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31033
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.010"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..2038
                     /gene="uvrA"
                     /locus_tag="ACJJD2_000449"
     CDS             <1..2038
                     /gene="uvrA"
                     /locus_tag="ACJJD2_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HGG7579049.1"
                     /translation="ELEPRLFSFNNPMGSCPTCDGLGNTNFFDSEKVVAHPELSLASG
                     AIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSE
                     RGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCGGARLRKEARYV
                     YVGGEPLHEVSAWPLTKTHRFFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLN
                     LSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDL
                     GNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGK
                     KSIAVPSERTPVNPDRMLVLKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDT
                     LAKITARELNRAQEEPAPYDDIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIR
                     ELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKR
                     YNRETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSAT
                     TLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIDRLKGKGNSIV
                     IIEHNLDVIKTADWIVDLGPEGGDGGGRIIASGSPEEVAKVKGSYTGKYLKNIL"
     gene            complement(2070..2240)
                     /locus_tag="ACJJD2_000450"
     CDS             complement(2070..2240)
                     /locus_tag="ACJJD2_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579050.1"
                     /translation="MFLGIFIALSGILTLLEMFNVISSDMKWGMPLMFTCLGFSIIFD
                     SFKAKQNRKQKE"
     gene            complement(2255..2440)
                     /locus_tag="ACJJD2_000451"
     CDS             complement(2255..2440)
                     /locus_tag="ACJJD2_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579051.1"
                     /translation="MTNKIKPGQNTGNNGGIYQEIGSRGGRKDNYATIKDNQKAPPTQ
                     NPGSSWIQIKRTPDSSR"
     gene            complement(2456..2725)
                     /locus_tag="ACJJD2_000452"
     CDS             complement(2456..2725)
                     /locus_tag="ACJJD2_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579052.1"
                     /translation="MKIKFAHLRHPAVGGGYINFAVFDAKSTNGNHSVVLKELTTEAR
                     RNGLKIDQSALIFEQHGRTQFYGDKNLVDFLSANWYPQWTHTLTI"
     gene            2881..3804
                     /locus_tag="ACJJD2_000453"
     CDS             2881..3804
                     /locus_tag="ACJJD2_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HGG7579053.1"
                     /translation="MKTIAPSHIKPLMPELNQSQRNRIIFIDFYLCFLGKINRKDLMQ
                     AFQISPAVATRDFALYCSSFSKNLRFDTKSKFYLSTEDFEPQFPHSFENAIKILNGSL
                     IFDIDSQHQPLLPFDLPPVLINPDVLIFSKISKALSLKKPLKISYHSISSGLSEKVIV
                     PLALVNDGFRWHLRAFDRTKNRFADFVLTRIIQANILLAENIEENETINNDIDWNRIV
                     KIELVPHPNHDEAKKVIEMDFGMTNGKLELALRASNIGYVLQQWRVDCSSDHHIDDPA
                     FRLWLLDNLVLYGINNAEHLAPAFDKKRSKP"
     gene            complement(4031..4297)
                     /locus_tag="ACJJD2_000454"
     CDS             complement(4031..4297)
                     /locus_tag="ACJJD2_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579054.1"
                     /translation="MKRQTVNQATACVRTAHTLHVDFEVPCNSQVGCVAQPRTRCWVC
                     RLRLAAAETPEEKAKDAAEEAKEEAKDAAEDAKEAAEDAKEEAK"
     gene            4546..4875
                     /locus_tag="ACJJD2_000455"
     CDS             4546..4875
                     /locus_tag="ACJJD2_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7579055.1"
                     /translation="MDVQKQYSFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPYTKNLSAGKQRQHERGIWQRRFYGHTVRDETDLQRCADYIHSNPIKQKMSRA
                     KTESCKK"
     gene            complement(4941..5081)
                     /locus_tag="ACJJD2_000456"
     CDS             complement(4941..5081)
                     /locus_tag="ACJJD2_000456"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579056.1"
                     /translation="MPSETGNRVSDGILFVISKRGSLNIPTLFLPFEAGRIFIGQTGA
                     NP"
     gene            complement(5110..6000)
                     /gene="sucD"
                     /locus_tag="ACJJD2_000457"
     CDS             complement(5110..6000)
                     /gene="sucD"
                     /locus_tag="ACJJD2_000457"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HGG7579057.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVSKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKTKGLA"
     gene            complement(6011..7222)
                     /gene="sucC"
                     /locus_tag="ACJJD2_000458"
     CDS             complement(6011..7222)
                     /gene="sucC"
                     /locus_tag="ACJJD2_000458"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HGG7579058.1"
                     /translation="MEANSGHSTNLKEKSMNLHEYQAKELLASYGLPVQGGILAHNGE
                     EAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTD
                     ANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKI
                     FKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLA
                     VRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIG
                     CMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVLINI
                     FGGIVRCDMIAEAIVAAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLND
                     AAEKIVAAVNA"
     gene            complement(7276..7563)
                     /locus_tag="ACJJD2_000459"
     CDS             complement(7276..7563)
                     /locus_tag="ACJJD2_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579059.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            complement(7688..9121)
                     /gene="lpdA"
                     /locus_tag="ACJJD2_000460"
     CDS             complement(7688..9121)
                     /gene="lpdA"
                     /locus_tag="ACJJD2_000460"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7579060.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDIKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLNIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            9323..9433
                     /locus_tag="ACJJD2_000461"
                     /pseudo
     CDS             9323..9433
                     /locus_tag="ACJJD2_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(9485..10651)
                     /gene="odhB"
                     /locus_tag="ACJJD2_000462"
     CDS             complement(9485..10651)
                     /gene="odhB"
                     /locus_tag="ACJJD2_000462"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HGG7579061.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPVAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAETGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAGARPEE
                     RVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGVKLGFM
                     SFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSIA
                     DIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHAT
                     KERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLDL"
     gene            complement(10751..13579)
                     /locus_tag="ACJJD2_000463"
     CDS             complement(10751..13579)
                     /locus_tag="ACJJD2_000463"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HGG7579062.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMTLQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNASKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNGSVKRVVLCAGQVYYDLEAGRTERKLEDDVAIVRVE
                     QLYPFPYEEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(13784..15067)
                     /gene="gltA"
                     /locus_tag="ACJJD2_000464"
     CDS             complement(13784..15067)
                     /gene="gltA"
                     /locus_tag="ACJJD2_000464"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HGG7579063.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPAGER"
     gene            complement(15179..15427)
                     /locus_tag="ACJJD2_000465"
     CDS             complement(15179..15427)
                     /locus_tag="ACJJD2_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HGG7579064.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(15431..16138)
                     /locus_tag="ACJJD2_000466"
     CDS             complement(15431..16138)
                     /locus_tag="ACJJD2_000466"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HGG7579065.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDDLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(16258..18021)
                     /gene="sdhA"
                     /locus_tag="ACJJD2_000467"
     CDS             complement(16258..18021)
                     /gene="sdhA"
                     /locus_tag="ACJJD2_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HGG7579066.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGEDYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(18024..18365)
                     /gene="sdhD"
                     /locus_tag="ACJJD2_000468"
     CDS             complement(18024..18365)
                     /gene="sdhD"
                     /locus_tag="ACJJD2_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HGG7579067.1"
                     /translation="MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSVKVIWG"
     gene            complement(18359..18736)
                     /gene="sdhC"
                     /locus_tag="ACJJD2_000469"
     CDS             complement(18359..18736)
                     /gene="sdhC"
                     /locus_tag="ACJJD2_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HGG7579068.1"
                     /translation="MSVKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(19019..20422)
                     /locus_tag="ACJJD2_000470"
     CDS             complement(19019..20422)
                     /locus_tag="ACJJD2_000470"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7579069.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDDHTQITAKSFVIATGSRPVILPQWQSLGDRL
                     IINDDVFSWDTLPKSVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVYWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIDKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTNPQIGFVGLKYAQVTAQYQPDEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(20671..21408)
                     /locus_tag="ACJJD2_000471"
     CDS             complement(20671..21408)
                     /locus_tag="ACJJD2_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HGG7579070.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPNWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(21684..23960)
                     /gene="metE"
                     /locus_tag="ACJJD2_000472"
     CDS             complement(21684..23960)
                     /gene="metE"
                     /locus_tag="ACJJD2_000472"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HGG7579071.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQVAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARSAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     QYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(24098..24976)
                     /gene="metF"
                     /locus_tag="ACJJD2_000473"
     CDS             complement(24098..24976)
                     /gene="metF"
                     /locus_tag="ACJJD2_000473"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HGG7579072.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            25176..25451
                     /locus_tag="ACJJD2_000474"
     CDS             25176..25451
                     /locus_tag="ACJJD2_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HGG7579073.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            25451..25576
                     /gene="ykgO"
                     /locus_tag="ACJJD2_000475"
     CDS             25451..25576
                     /gene="ykgO"
                     /locus_tag="ACJJD2_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HGG7579074.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(25682..25882)
                     /locus_tag="ACJJD2_000476"
     CDS             complement(25682..25882)
                     /locus_tag="ACJJD2_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579075.1"
                     /translation="MIGRLFRIFFFFALAALIMNRLFSRRQKRALREVAEISARVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            26025..27164
                     /locus_tag="ACJJD2_000477"
     CDS             26025..27164
                     /locus_tag="ACJJD2_000477"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HGG7579076.1"
                     /translation="MSQNASVGIVMPQKIPFEVPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPLVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            27161..27742
                     /gene="metW"
                     /locus_tag="ACJJD2_000478"
     CDS             27161..27742
                     /gene="metW"
                     /locus_tag="ACJJD2_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HGG7579077.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            27859..28704
                     /locus_tag="ACJJD2_000479"
     CDS             27859..28704
                     /locus_tag="ACJJD2_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
                     /protein_id="HGG7579078.1"
                     /translation="MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAAS
                     SSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPDSGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLTQGSEETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(28753..29313)
                     /gene="efp"
                     /locus_tag="ACJJD2_000480"
     CDS             complement(28753..29313)
                     /gene="efp"
                     /locus_tag="ACJJD2_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HGG7579079.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(29356..30504)
                     /gene="earP"
                     /locus_tag="ACJJD2_000481"
     CDS             complement(29356..30504)
                     /gene="earP"
                     /locus_tag="ACJJD2_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HGG7579080.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTALVPDIVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSLQESVQKYFWFMGFSEKSGGLIRERDYRNA
                     VRFDTEALRERLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPMTLLLAGTQIIDS
                     LKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYSPETASVHRRLSDDLNGGEALSAT
                     QRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(30523..30801)
                     /locus_tag="ACJJD2_000482"
     CDS             complement(30523..30801)
                     /locus_tag="ACJJD2_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579081.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKLQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
BASE COUNT         7723 a         7933 c         7567 g         7810 t
ORIGIN      
        1 cgaattggag ccgcgcctct tttcgttcaa caacccgatg ggctcctgcc cgacttgcga
       61 cggcttgggt aacaccaatt tcttcgactc cgaaaaagtg gtcgcgcatc ccgaattgtc
      121 gctggcttcg ggcgcgattg acggctggga caagcgcaac cagttctatt tccaaatgat
      181 tcagtcgctg gcgcggcatt acggtttcga cgtgcaggct gcttgggaaa ccctacctgc
      241 aaaaatcaaa aaagtcgtgt tgcacggctc gggcaaagaa gtcattgatt tcacttacct
      301 gtccgaacgc ggcaccacct tcaaccgcag ccacgccttc gaaggcatca tccccaatct
      361 cgaacgccgc taccgcgaaa ccgacagcga aaccgtgcgc gaaaaactgc gcgaatacca
      421 aaaccaccgc gcttgcccga gctgcggcgg cgcacgtttg cgcaaagaag cccgctacgt
      481 ttacgtcggc ggcgagccgt tgcacgaagt ttccgcctgg ccgctgacca aaacccaccg
      541 attctttgaa acgctggatt tggacggcaa caaaaaacaa atcgccgaaa aaatcctcaa
      601 agaaatcacc gaacgtctcg gctttttgat taatgtcggg ctggattacc tgaatctctc
      661 ccgttccgcc gaaacccttt ccggcggcga agcccagcgc atccgcctcg ccagccaaat
      721 cggcagcggc ctgaccggcg tgatgtacgt tttggacgaa ccctccatcg gcctgcacca
      781 gcgcgacaac gaccgcctgc ttgccaccct caaacgcctg cgcgatttgg gcaacagcgt
      841 catcgtggtc gaacacgacg aagacgccat ccgcgaagcc gatttcgtcg tcgatatggg
      901 cccgggcgca ggcgaacacg gcggcaacgt attgattgcc gacacgcccg aaaacgtcgc
      961 caaatgcgaa aactccgtta ccggacaata cctcagcggc aaaaaatcca ttgccgtgcc
     1021 gtctgaacgc acgccagtca atcccgaccg aatgctcgtc ctcaaaggcg cgcgcggcaa
     1081 caacctcaaa aacgttaccc ttgagctgcc gctcggtttg attacctgca tcaccggcgt
     1141 atccggcagc ggcaaatcca ccctgattaa cgacaccctc gccaaaatca ccgcccgcga
     1201 actcaaccgc gcccaagaag aacccgcccc atacgacgac atccgcggcc tcgaacacct
     1261 cgacaaagtc atcaacgtcg accaatcccc catcggccgc accccgcgct ccaaccccgc
     1321 cacctacacc ggcctgttca cccccatccg cgaactcttc gccggtgtac ccctctcgcg
     1381 cgaacgcggc tacaacgtcg gcagattctc cttcaacgtc aaaggcggcc gctgcgaagc
     1441 ctgccaaggc gacggcgtca tcaaagtcga aatgcacttc ctgcccgacg tgtacgtccc
     1501 ctgcgaagtc tgccacggca aacgctacaa ccgcgaaacg ctcgaaatcc aatacaaagg
     1561 caaaaacatc agccaagtcc tcgacatgac cgtcgaagaa gcccgtgaat ttttcgacgc
     1621 cgtccccacc gtatcgcgca aactgcaaac cttgatggac gtaggcttag gctacatccg
     1681 tctcggccaa tccgccacca ccctctccgg cggcgaagcc cagcgcgtca aactcgcctt
     1741 ggaactctcc aaacgcgaca ccggcagaac gctctacatc ctcgacgaac ccaccaccgg
     1801 cctacacttc gccgacatcg ccctgctgct ggaagtcata gaccgtctga aaggcaaagg
     1861 caactcgata gtgattatcg agcataatct ggatgtgatt aaaaccgccg attggattgt
     1921 ggacttaggg ccagaaggcg gcgacggcgg agggaggatt attgcttcag gtagcccgga
     1981 ggaagtggcg aaggttaagg ggagttatac tgggaagtat ttgaagaata tactttaaaa
     2041 aacgggatgg tttaaaccat cccgtttttt tattccttct gttttcgatt ttgtttggct
     2101 ttgaagctat caaaaataat gctaaatccc aaacaggtga acattaaagg catcccccat
     2161 ttcatatccg aagaaataac attaaacatt tctaataatg taagaatgcc tgataaagct
     2221 ataaaaatac ctaaaaacat tagaactatc cttattatct ggagctatct ggagttcttt
     2281 taatttgaat ccatgagctt cctggatttt gagtgggtgg tgctttttga ttatctttaa
     2341 tggttgcgta gttatctttt cgaccacctc gtgaaccaat ttcttgataa attccaccgt
     2401 tatttcctgt attttgacca ggtttgattt tgttcgtcat tatcatctcc ataatttaaa
     2461 tagttaaagt atgagtccat tgcggatacc aatttgcaga taaaaaatct actagatttt
     2521 tgtctccata gaattgtgta cgcccatgtt gttcaaatat taacgcagat tggtcaattt
     2581 ttaatccatt tctacgagct tcagtggtca attccttcag tacgacacta tggttaccat
     2641 tagttgattt agcatcaaaa acagcaaagt taatatatcc tccacctacg gctggatgtc
     2701 ttaagtgagc aaattttatt ttcataaata aatcctataa aaaattacat aacagaaatt
     2761 ttaagtcaga gagctactat gaagtagctt tttgcattat atgcactctt tttgattacg
     2821 tcaagcaatt tttttgaatt catattgcca tgaaaaagat tgatggaata taatgcaatt
     2881 atgaaaacaa tcgctccttc ccatataaag ccccttatgc cagagttgaa ccaatctcaa
     2941 cgcaatagga ttatatttat tgatttctat ctatgctttc taggaaagat aaatagaaaa
     3001 gatttgatgc aggcatttca aatttcccca gctgttgcta ctagggattt tgcgctatat
     3061 tgctctagtt tttcgaaaaa tctccgtttt gataccaaaa gtaaatttta cctctctact
     3121 gaagactttg aacctcaatt cccccattca tttgaaaatg caattaaaat tcttaatggc
     3181 agtttaatat ttgatattga ttcccaacat caacctcttc ttccgtttga tttacctcct
     3241 gttttaataa atcctgatgt cttaatcttt tctaaaatat cgaaagcatt atccttaaaa
     3301 aaacctctaa aaatctcata tcattcaatt tcatctggat tatctgagaa agttattgtg
     3361 cctcttgctc tagttaatga cggatttcga tggcatttac gggcattcga tagaacaaaa
     3421 aaccgatttg cagattttgt cctaacacga ataattcaag caaatatttt attagctgaa
     3481 aatattgaag aaaatgaaac gattaacaat gatattgatt ggaatagaat tgttaaaatc
     3541 gagttggttc cccatcctaa tcatgatgaa gctaaaaaag tgattgaaat ggactttgga
     3601 atgacaaatg gaaaattaga attggcgctt agagcttcaa atatcggata tgttttacag
     3661 caatggcgag tcgattgttc gtcagatcat catatcgatg atcctgcttt tagattatgg
     3721 ctgttagata atttagtttt atacggcatc aacaatgctg aacacttagc gcctgccttt
     3781 gataaaaaac gtagcaagcc gtagcctaca tatccaaccg accgcgtgcg tggctgcgcc
     3841 acacacgcgg ttgtttgatt gatggctttc tgttgtaaat tgaacttagt taaaactaac
     3901 actttcagac ggcatgaaaa atggccgtct gaaaactgaa aaagctttat ctaaaacaac
     3961 taccctaact cacaaaacaa aaaacggatt cccaatcatt ggaatccgtt tttctgtaaa
     4021 gctatccgaa ttatttagct tcttctttag cgtcttcagc agcttctttg gcatcttccg
     4081 ctgcgtcttt tgcttcttct ttagcctctt cagcggcgtc tttggctttt tcttcaggag
     4141 tttctgcagc agcaagccgt agcctgcata cccaacaccg cgtgcgtggc tgcgccacac
     4201 accctacctg tgaattacac ggaacttcaa aatcaacgtg tagggtgtgt gcggtacgca
     4261 cgcacgcggt tgcttgattg acggtttgcc gtttcaactt ttaacttcgt tgaagctagc
     4321 gctttcagac ggcctccaat gtcgtctgaa agcgctagct tcaacgaagt taaaaacctt
     4381 aaacaacaag ccattccttc tccaacgctc aaaccaaaaa caaaaatcct atggcgcgtt
     4441 atcgcagaaa cttcattgcc ggcggcacat tctttttcac cgtcaaactc gccgacccga
     4501 aatcgcgcct gcttgtcgaa catatcgact tcgcgggcgg cttatatgga tgtgcaaaaa
     4561 caatattcct ttgaaaccgt cgccgtatgc gtgctgccga accatattca cgccatttgg
     4621 acgctgccgc ccgacgatgc ggattattcc ctactccggc ggctgattaa aaccaaattc
     4681 tccgcatatt ccccttatac taaaaactta tccgccggca aacagcggca gcacgaacgc
     4741 ggtatttggc aacggcgttt ttacggacac accgtgcgcg acgaaacgga tttgcagcgt
     4801 tgcgcggact acatccattc caatcctatc aaacaaaaaa tgtcgcgtgc taaaacagaa
     4861 tcctgcaaaa aataatatca gtcttttcaa atgcgatagt tatcattccc caacttcaaa
     4921 caaggcgtgt gcaacctgac ttacgggttt gctcctgttt gaccgataaa tattctgcct
     4981 gcctcaaagg gcaaaaataa tgtgggtatg ttgaggctgc ctctttttga aatgacaaac
     5041 aaaatgccgt ctgaaacccg atttccggtt tcagacggca tttgatgttc aatcagttgt
     5101 caaacctgat tatgccaaac cttttgtttt caacacttcc agcatggtag tgcccaactc
     5161 ggcagggctg cgggtgtaag cgataccggc tttttcaaac gcggcgaatt tttcctcggc
     5221 agtacctttg ccgccggaaa taatcgcacc ggcgtggccc atgcgtttgc ctttaggagc
     5281 ggtaacaccg gcgatgtagc cgacaacagg tttgcttacg ttggattgga tgtattcggc
     5341 tgcttcttct tccgcagtac cgccgatttc accgatcatg atgatggcgt cggtatctgg
     5401 gtcttcttgg aaaagtttca gtgcgtcgat ttggttcata ccgggaatcg ggtcgccgcc
     5461 gataccgata caggttgatt gacccaagcc cagtttggtg gtttgtgcca cggcttcgta
     5521 agtcaatgta ccggaacggg aaataatacc gatgcggccc ggagtgtgga tgtggcccgg
     5581 cataataccg attttgcact cgcctggggt aatcacgccc gggcagttag ggccgaccaa
     5641 gcgggtaccg ttgccgttgg tttccaagta acgtttggct ttgagcatgt ccagagtcgg
     5701 cacgccttcg gtaatcacaa ccaccaagcc tacgccggaa tcaacggctt caacgataga
     5761 atccaacaca aacggagcgg gaacgtaaat tacagatgca tccgcgccgg tttctttaac
     5821 ggcttctttc atggtgttga atacaggcag gttcaggtgg gtttgaccgc ctttgcccgg
     5881 ggtaacgccg ccgacaactt tagtgccgta agccagagct tgttcggagt ggaaagtacc
     5941 gtttttaccg gtgaaacctt gaaccaatac tttggtgtct ttattaatca atacgctcat
     6001 tcttttctcc ttaggcgttt acggctgcaa caattttttc ggctgcgtca ttcaggccgt
     6061 ctgcagaagt cagtttcaga cctgattcgt tcaggatttt cgcgccgagt tcggcgttgt
     6121 tgccttccaa acgaacaacg acaggaacgt cgacgttgat ttctttaacg gctgccacga
     6181 tggcttccgc aatcatgtcg caacgtacga taccgccgaa gatgttgatc aatacgcctt
     6241 taacggattt gtcttccaaa atcagtttga acgcttcaac cacgcggtct ttggttgcgc
     6301 cgccgccaac gtccaagaag ttggcaggtt gaccgccttt gagtttgatg atgtccatgg
     6361 tggccatcgc caaaccggca ccgttaacca tacagccgat gttgccttcc agggcaacat
     6421 agttcaggtc gaattcagaa gctttcagtt cacgttcgtt ttcttgagat ttgtcgcgca
     6481 attcagcgat ttttggcagg cggtagagcg cgttgctgtc gatgccgatt ttgccgtcca
     6541 cgcaggcgag cgcgccgttt tcgcgaactg ccagcgggtt gacttcaaac agggcgaagt
     6601 cgttttcgac aaacgctttg tacgcgccgg tcatcagttt gacgaactcg ttgatttgtt
     6661 tgtctttcaa gcccagttgg aaggcaactt cgcgagcttg gcaaggttgc aggccgacca
     6721 gcggatcaac ggttactttg aagatttttt ctggagtttc ggcagcaact ttttcgattt
     6781 ctacgccacc ttcggtagaa gccatgaatg taacgcggcg ggtagaacgg tcaaccactg
     6841 cgcccaagta cagctcggtt tgaaccggat acatatcttc acaaaccaaa acgctgttga
     6901 caggttggcc gttggcatcg gtttggtaag ttaccaagtt ggtgccaatc aggctttcag
     6961 ccacttcttt agcttcttcg cggcttttaa cgacttttac gccgcccgct ttaccgcggc
     7021 cgccggcatg tacttgtgct ttgacaacag cgaatttgcc gcccaatttg tcgtaagctg
     7081 cagcggcttc ttcgccgttg tgtgccaaaa taccgccttg tacgggcaaa ccgtagctag
     7141 ccagcagttc tttagcctga tactcgtgta aattcatgga tttctccttt agattagtgg
     7201 aatgccccga gtttgcctcc aaatggcaag cccgtgcgtt tcagactacc tttcggcggt
     7261 cggaaaatcg tcgtttcact tgctgaaagg caaccacatc cgcgccagca gatacatggc
     7321 tgcaccgcct cccccgagaa taaaaaagac gatgcctttt ttacgcgaat tcggacagag
     7381 cagataaacg gcaaggctga aactgataaa caacaatgcc acgcgccaaa ccaattcttt
     7441 atctttgaaa cggttgagcg tataagtttc ggtcatcatc acatacatct gccacaatgc
     7501 ggccatacac atgctgatga tgcccatcgg tataaagaaa ataccgacta tttctttgtt
     7561 cataacgaat gtaaatgctg tttgtttgtc tgacggaatt ataaatcaga aaacgaagct
     7621 ctcggaacat tcaatttgtc gaaagcctta aggccgtctg aaaagtttca gacggcctta
     7681 atatctatca accgtgcaaa gcgcgtttgt cggccgccaa tgcagcttcg tgaaccactt
     7741 cggacaaggt cgggtgggca tggataatgc gggcgatgtc ttcgctgctg gcgaagaatt
     7801 cgagcgcagt cacgccttcg gtaaccaatt cgctgacaac cggaccaatc atgtgtacgc
     7861 ccaagatgcg gtcggttttg gcatctgcca atactttaac cgtacctttg gctttgccca
     7921 ttgccaatgc gcgaccgttt gcaccgaaac ctgaagtacc ttttttgtac tccacgcctt
     7981 cggctttgag ctgctcttcg gttttaccta cccaagcgat ttcaggatcg gtgtaaatca
     8041 cgaacggtac gttgttgaag tcgatatgcg gtttttgacc ggcgatgcgc tcggcaacgg
     8101 caacgccttc atcgctggct ttgtgtgcca acatcgggcc gcgaaccacg tcgccgattg
     8161 cccatacgtt aggcaggttg gtacggcatt cgccatctac tttgatgaaa ccgcgctcgt
     8221 ctttttccaa gcctacggct tcggcgttca gacctttggt gtttggaata cggccaatgg
     8281 caacgatcag tttgtcaaat acttcggttt tagcttcgcc ggcagcagtt tcgtaagcaa
     8341 cggaaacgcc tttgccttca gatttgatgt cgccaatttt cacgcccagt tcgatgttca
     8401 agccctgctc tttagtgaag tatttgaagg cttctttggc gatttgttgg tcggcggcag
     8461 ccaggaaggt cggcgcagct tcaagaatgg taacttctgc acccacgcgg ttccatacgg
     8521 aacccatttc caaaccaatc acgccggaac cgatgacgcc cagtttggca ggcacttcgg
     8581 tcaggttcaa tgcgccttcg ttgtccaata cgttcacgtt gtcgatagcg acttgtggca
     8641 gcggacgcgg tacggaaccg gttgctacga tgacgtgttt ggcttcgata acggttttct
     8701 cgcctttgtt atcgacttcg atttggtaag catcgccatt tttaccggca aaagaagcag
     8761 taccgaacag gctggttact ttgttttttt ggaacaggaa tttcacgccg ccggtcagct
     8821 tggtcacgat ggcatctttg cgctcaatca ttttggccgc gtcgaatttt atgtcgccga
     8881 cagtgatacc gtgttcggca aactcgtgtt gcgcggcgtg gaaatgttcg ctggattgca
     8941 acagggcttt ggaaggaata cagcctacgt tcaagcaagt accgcccaat gcaggggcat
     9001 tgcctgcttt gttaacccct gcgtcaacgc aagcggtttt gaaacccagt tgcgcggcac
     9061 ggatggcggc aacgtatccg cccgggcctg caccaatcac tactacatca tattgagaca
     9121 tcgtgtcatc ctttgctttt gcagtatctc aaaataaaaa cgatactttt tgtttctttt
     9181 ttattttgaa tgactgcatt ttgacggttt taagaaaagg ccgtctgaaa gtctatatct
     9241 gccgattcat tcgaatcaaa tgtttcagac ggcctcaatc gttcgctgag cctattgtag
     9301 cacgatacta cattacgcta catctaaata tagtggatta aatttaaatc aggacaaggc
     9361 gacgaagccg cagacagtac agatagtacg gcaaggcgag gcaacgccgt actggtttaa
     9421 atttaatcca ctataaaaat tcagacggcc ttttcattaa caaataaaag gccgtctgaa
     9481 acgattacag atccaacaac aggcgggctg ggtcttccaa cgcgtcttta atggctacca
     9541 aagtcaatac agcttcgcga ccgtcgatga tacggtggtc gtaagacaga gccagataca
     9601 tcattggacg gacaacaact tgaccgtttt caaccacagc gcgctcttta gtggcatgca
     9661 tacccaaaat cgcagattga ggcgggttga tgatcggggt agacatcata gaaccgaaag
     9721 taccgccgtt ggtaatactg aatgtaccgc cggtcagatc ttcgatagcg attttgccat
     9781 ctttggcttt tttcgcgtaa tcaacaattg cttgttcgat gtcggcaatg ctcatttggt
     9841 cggcatcgcg caggattggc acaaccaaac cgcgtgggct gccaatcgcg ataccgatgt
     9901 cgaagtagcc gtggtacacg atgtctttgc cgtcaacaga agcattcaca accgggtatt
     9961 ttttcagggc ggcgacagcg gctttaacga agaaggacat aaagcccaat ttcacgccgt
    10021 gttctttctc gaatttttct ttgtacttcg cacgcaagtc catgattggt ttcatgttga
    10081 cttcgttgaa tgtagtcaga atggcgtttt cttgttgaga agccaagagg cgttctgcaa
    10141 cacgggcacg caggcggctc attggtacgc gttcttcagg acgtgcgccg gcaggggctg
    10201 cggctgcggc aggtttggca gcggcatttt gtacgtcttc tttcaatacg cgaccgtcac
    10261 ggccggaacc ttgcaatgcg ttcacgtcaa caccggtctc cgcagccagt ttggcggcgg
    10321 caggcatagc ggcgttgttt tgtgcggcag caggagcggc agccggggcg gcttcggcag
    10381 gagcggctac gggtgcttcg gcagcggcag tagcagctgt atcgatgcgt gccaaaactt
    10441 ggtcggcaac aacggtttca ccgtcttgcg ctacgatttc aaccaatacg ccggcttgtg
    10501 gggaagggac ttccaaaacc actttgtccg tttcgatatc gatcaggatt tcgtcacggg
    10561 caactgcttc gccaactttt ttcttccatt ccaagagcgt gccttcagat acgctttcag
    10621 acagcatagg tacttttaca tcaataatca ttttgtgtct ccaatggccc tttcagacgg
    10681 cctgttgtgt gtttttcatt ctgcatatgg gcattccgcc tgagcagcct cagacggaat
    10741 gccacttggc ttacaacgcc aaagcgtctt caaccaattg tttcaattgg gcaatatgtt
    10801 tgcttgagta gcccactgca ggcgatgcgc tgcttggacg accggcataa gacagttttt
    10861 gctcttcgct gataacgtct tcgatgcggt ggcggatttg gtagaacgca ccttggtttt
    10921 tcggctcttc ttgtgcccaa accacagatt ttgcgttcgg atatttcgcc agttcggctt
    10981 taacctcctc gtatgggaac ggatacagct gctcaacgcg gacaatcgca acatcatctt
    11041 ccagtttacg ctcggtacgg cctgcttcca agtcatagta aacctgaccg gcacacaata
    11101 ccacacgttt cacgctgccg ttgcttgcgc gttcggcggt atcaccgata accggacgga
    11161 aagtcgaacc ttcggtgaag ttttccagcg ggctcattgc acctttgaag cgcaacaggc
    11221 gtttggacat gaaaatcacc agcggtttgc ggtatgaacc caaaacttgg cgttgcaaga
    11281 ggtggaacat ttgcgacgct tcagacggca tgatgacttg catattgttc tcggaacaca
    11341 gttgcaacca acgttctacg cgtgcagagg agtgctcggg gccttgaccg tcgtagccgt
    11401 gcggcaggat ggtggtcaga ccgcacaaac gaccccattt ggtttcgcct gaagacagga
    11461 attggtcaat agtcacttgc gcgccgttgg cgaagtcacc gaattgagcc tcccaaatgg
    11521 tcagcttgtc aggcgcggag caggcaaagc cgtactcgaa cgccatcacg gcttcttcgt
    11581 tcaaaatgga gtcgataacc aggaactcgc ccataccttc gcccatatgg cgcagaggga
    11641 cataagtacc gtcgtcccat ttttcgcgtt tttgatcgtg caataccgca tgacggtgtg
    11701 agaatgtacc gcgcccagag tcctcgccgg aaatacgcac gccatggcct ttggttacga
    11761 ggctggcgta tgcgagggtt tccgccatac cccagtcgat ggcttgtttg ccggatgcca
    11821 tggctttacg cgcttcaatc acacgttttg cagtcggatg cagggcaaag ccttccggta
    11881 cggcggtaaa cttctcagtg agacgctcaa tatctgcggc aggcaaaccg gtttcgatgt
    11941 gttcgcgcca atctttgcct tggtatttgc tccagtcgat ttgcgtgcgt tgaaagttgc
    12001 tcaacgttgt ttgctcgacg tgttcgcctt tgtccaaagc atcacggtag gcttggatgt
    12061 aaccgtctgc ctcggcttgg gttaccacgc cttcggcaat cagttgctcg gtgtacaaag
    12121 cacgcgcacc ggggtgttgc gatacttttt tgtacatcat cggttgggtc aaggtcggat
    12181 catcgccctc gttgtgaccc catttacggt agcagacaac gtcaatcacg atgtctttat
    12241 ggaatttttt gcggtaatcc aaagcggctt ggatggcaaa gcaaacacgc tcaggatcat
    12301 cgccgttcac atggataacc ggagcggaaa ccatttttgc gatatcggta cagtgtacgg
    12361 ttgaacgggt atcgcggata tcggaagtgg taaagccgat ttggttgttg atgacgatat
    12421 gaaccgtacc gccggtggta taaccgcgcg ttttagacag gttgaatgtc gcttggttga
    12481 ctcccagacc gataaatgcg gagtcgccgt gaatcaatac cggcaagact ttgtcgcggc
    12541 cgttttcgcc caaacgtttt tgtttggcgc gcgcagaacc ttccaccacc gggttgacga
    12601 tttctaagtg agacgggttg aacgccaaag aaacatgcat cgggccgtgc ggggtagcaa
    12661 tatcggagct gaagcccata tggtatttca cgtcgccgct gggcagtttg atttcggcac
    12721 gaccttcaaa ttcggcaaac aaatcgccgg gttttttgcc caaaatgttc accaaaacat
    12781 tcagacggcc acggtgcgcc ataccgatga tgacttcttc cacgccgtct ttactggcgt
    12841 tttgaatcag gtagttcaaa ccggcaatcg cgctttcgcc gccttcgaca ccgaaacgtt
    12901 tctgaccgac atatttggta tgcagataac gttccaaagt ttcggcagca gtcatctctt
    12961 tcaagatacg gcgtttttga tcggcattgt aatgcggtgt ggacaatacg ctttcaaaat
    13021 aattgcgtac ccagcggcgc tcttcggtat tgggaatata gatatattcc aatgcgatgt
    13081 ggccgcagta ggtttgtttg aggttgctga tgatttggga caaaggcagt ttgccgcgat
    13141 tggcaaaatc gccctcgccc atattgaatt gaagcgtcat atcggcatct gacagaccgt
    13201 ggaatttcgg atcgagggct tcaatatcgc gcggggggat acgtttgagc ggatcaagtt
    13261 gggctgcacc cacgccttgg atacgatagg cagaaatcag ccgtaaaacg ctgacttgct
    13321 ttttcagcat tgcctcatcc gcaccgcccg caacggcaga tgcaattttc tttttcgcca
    13381 aagtaacaaa tgattcgcga atcggtgtgt gtgcgacatc gacagcaacc gtccccggct
    13441 gtttgctcaa atcggtgaaa tactgcttcc atttttcatc aaccgcatcg gggttttcca
    13501 aaaaagcctc gtacaattcc tcaatgtagg gtgcgttcga accgaacagg taagagaaat
    13561 tgagtttttc gtccatcatg gcgtgcgctc ttttctttaa aatataaaca aagggtagaa
    13621 gtccgcgtcc tgacggctga actgatgccg tctgaaaaga cattttattc taccctattt
    13681 taaaccggat tgcctgtatt gatttcatcc gactacaatc aaatgtatac agaaagcaat
    13741 ccgattctct aatattgcct gtttgacaat atattaatgt atgttacctc tctcctgccg
    13801 gcacataatc gcggcgttcc gaaccagtat aaagctggcg cgggcggccg attttcagcg
    13861 aaggatcgct gatcatctcg tgccagtgcg aaatccaacc tacgctgcgc gacagggcga
    13921 agatgacggt aaacatttcg gtcgggatgc ccagcgcgga caggacgatg ccggaataga
    13981 aatcgacgtt tggatacagc ttgcgttcga taaagaacgg gtctttcagc gcaatctgtt
    14041 ccaattccat cgccagtttg aatttcggac tgtcttccaa gcccaattcc ttcaaaactt
    14101 catagcaggt ttcgcgcata atgctggcac gcggatccat attgcggtac acgcggtgac
    14161 cgaagcccat cagacggtat ttgcgttgtt tcacaccttc catgtatgcg gcaacattag
    14221 acacatcgcc gatttcgtcc aacattttca acacggcttc gttcgcaccg ccgtgcgaag
    14281 caccccacag gcaggcgata ccggcagcaa tacaggcaaa cggattcgca cccgaagagc
    14341 ctgccagacg gacggttgaa gttgaggcgt tttgctcgtg gtcggcatgc aaaataaaga
    14401 tgcggtcgag cgcgcgtgcc aaaacgggat tgggtttgta gtcttcacac ggcgtggcga
    14461 acatcatatg aaggaagttt tcggaataag aaagattatt cttcggataa ttgaacggca
    14521 gaccgtttga atagcggtag cacattgccg caatggtcgg gattttggaa atcaggcggt
    14581 aaatcgcgat tttgcggtgt tcgggattgc taatgtccaa gctgtcttgg tagaacgcag
    14641 acagcgcgcc gaccacgccg accatcatcg ccatcggatg cgcgtcgcgg cggaaccccc
    14701 ggaagaacca agtcagctgt tcatgcacca tcgtgtggcg gcggacggta ttgtcaaatt
    14761 ctgccttttg ctcgggagtc ggcagttcgc cgtaaatcaa caggtagcag acttccaaat
    14821 aatcggattt ttcggccagc tgctcgatgg ggtatccgcg ataataaagc aagccttgat
    14881 cgccgtcgat gtaagtaatt ttagactcac agcttgcggt tgaaacaaat ccggggtcga
    14941 aggaaaacaa acctgtattt tttgtcagcc cccgaatgtc aaccacatcg tgcccgatgc
    15001 tggcttccaa taccggcagc tccaaacctg cctgacccgg tacgttgagt ttgattgatt
    15061 tggacatatt attgctcctt tgcaagttat aacccacgtt actgcatccg cagcacgttc
    15121 tttgccttca gacggctttt gcattttgaa atctgcctgc aggcagattt cagatgcctc
    15181 atgcccgtct gattttttca agcatcggga taaggtgccc tttgtccgtt tccgaatgcc
    15241 cgttaatcaa ggcaagcaat tcttgatctt gaaattcaag gatttcggaa aactcggaca
    15301 gctctttatc gctcaaatgc tcgaattctt tttccataaa cctgccgaag attaaatcta
    15361 actccaacaa tccccggcgg gtttgaaaac ggattttccg tttggcaata tcgtcaaaaa
    15421 ccatcatttc ttaaacggcc cgcttcaaca taatctcttt aatcttaccg atggctcggg
    15481 tcggattcaa gtgtttgggg catacgtcca cacagttcat aatggtgtgg cagcggaaca
    15541 aacggtatgg gtcgttcaga tcatccaaac gctcattagt gatggtatca cggctgtccg
    15601 caatgaaacg gtaagcattc agcaaaccgg acggaccgac gaatttatca gggttccacc
    15661 aaaatgacgg gcaggcagtc gaacagcagg cgcacaaaat acactcgtac aaaccgtcca
    15721 actctttacg ctcttcctga gtttgcagac gctctttgtc cgcatcaatc ggattatcgt
    15781 tgacaacata aggtttgacg gaatggtatt gtttgaagaa ctgggtcata tccacaatca
    15841 ggtcgcggat aacaggcaga cctggcagag gacgaatttt aaccggctgt ttcaagccac
    15901 gcagatcggt cagacacgcc aaaccgtttt tgccgttgat gttcataccg tccgatccgc
    15961 aaatgccttc gcggcaggaa cggcggaaag acaatgtatc atcttgtgct ttcaggcgca
    16021 ctaaagcgtc caaaagttta acgtcggttg gttccaattc caactcgtaa cgctgcatat
    16081 aaggtttggc atcaacgtcc gggttgtaac ggtaaatttc aaaactcatt ttttccatga
    16141 gaagtgttcc ttttctcata aactgcccaa tgattttgta ttatgaattc aagcagttca
    16201 atgtgggtat ggttagattt cagacgacct ttgaggcgaa gaccgtctga aaacgcatca
    16261 ataaacgcgc ttggccggtt tgatgtattc cacgctcaag ggcttggtat gcaccggttt
    16321 gtaagacaag gtattggtat ctgaatggta cagcgtatgt ttcatccagt tttcatcatc
    16381 gcgctcagga tggtcgtctg aagcgtgcgc accgcgtgat tctttacgtg cttcggcaga
    16441 caccaaagtc gctttcgcca cttcaatcag gttatccaat tccaaagcct cgatacgcgc
    16501 ggtattccac actttgctct tgtctttgat ttcggtacgt ttcacacgct cggcaatcgc
    16561 catgacttct cgaacgcctt tgctcagaat ctcatcagta cggaacacgc cggcgtgcag
    16621 ttgtacagag cgttgcagtt cgcgacgcaa tgcatcaacg ttttcaccat cggtttggtt
    16681 gtccaaacgc tcgatacgtt ggcgggtcaa ctcacctgca ttagcaggca aaggtttcca
    16741 gtcgctttgc tctttgatga atttaatcat gctgtcgccg gcagctttac cgaataccac
    16801 caagtccaac agggagttgg tacccaagcg gttcgcaccg tgtacggaag cacaagcgca
    16861 ctcacctgcc gcatacagac cttttacagg cacttcgtaa tcttcacctt gcggaacgac
    16921 aacttcgccg tggtaattgg tcggaatgcc gcccatcata tagtgggtag tcggcacaac
    16981 gggaatcggg tctttaatcg gatcgatacc ggcgaactga atggaaatct cgcggatgcc
    17041 cggcagtttt tccataattt tttctgcgcc gatatggtcg attttcagta agacatggtc
    17101 tttgttttta ccgcagccgc gaccttcgta gatttccatc gccatcgcgc gggaaacaac
    17161 gtcgcgagaa gccaagtctt ttacggtcgg cgcatagcgt tccataaagc gttcgccgtc
    17221 ggcattcaac agaataccgc cctcgccgcg tacgccttcg gtaatcaaca cgcccgcacc
    17281 cgccacgccg gtcgggtgga attgccagaa ttccatgtct tccaacggga tacctgcacg
    17341 cgcacaaata cccaaaccat cgccggtatt catataggca ttggtagaag acgcataaat
    17401 acgaccgccg ccgccggtag caaacatcac agctttagcg tggaaaatat aaacttcgcc
    17461 ggtttccatt tccatggcgg ttacgccgac gacatcgccg ttttcatcac gaatcaaatc
    17521 ttgtgccgtc cattccacaa agaattgcgt attggcacgg acgttttgtt ggtacaaagt
    17581 atgcagcatc gcatgacctg tacggtcggc aaccgcacag gcgcgttcta ccgcgcgttt
    17641 accgtgttcg gcagtatggc cgccgaaagg acgctgataa attttaccgc tttccacacg
    17701 gtcaaaaggc atacccatgt gttccaactc aattacggct tcaggcgcgg cgcggcacat
    17761 aaactcaatc gcatcttggt cgcccaacca gtcggaacct ttcacggtat cgtacatgtg
    17821 ccagtcccaa cggtcttcct gcacattacc cagagaggcg gaaataccgc cctgcgccgc
    17881 tacggtatgc gaacgggtcg ggaacacttt agacaaaacg gcacaattca gaccggattt
    17941 ggataattgg agggctgcgc gtaaacctgc accaccaccg ccgacaatca cggcatcaaa
    18001 cttgcgaaca ggaaaaccca tacttacccc caaatcactt taactgaata cacgagacag
    18061 ccgaccagcc aaacgatggt ggcaacctgc aaaaacaaac gcacgccgaa gggtttgata
    18121 tagtccatcc acaaatcgcg gatacccacc caagcgtgca agaatacggc gatgaagctc
    18181 acttgggtaa atacttttac ccaagtttga ctaaaaaatg cctgccatgc cgaatattct
    18241 ttaggcaggg aaaatagaac cactaaaagt gcaacggtat aaatcaacat aataaccgca
    18301 gtcgcacgtt gcatcaccca atcgcgcaaa ccgtaatggg caccggtcaa tttacgttct
    18361 accataacaa cgctcccaaa acgacagtca aaaccaatgc agaagcaaat acggctttag
    18421 cggtattgcg cgcagtattc agctcaaggc ctttgtgcgc atccaaaaat aaaaagcgga
    18481 taccggcaag ggaatggtgc agataagccc acaatacgcc gattaaaacc agcttgacca
    18541 aaggatggga aacaatggca cggtaagttt caaatgcaga ctcttgactc agggtgccgg
    18601 acaggaaata cagcaggaaa ggcagcataa taaacagccc gaccccgctg atgcggtgaa
    18661 ggatggaaac tatcccgggt atcggcagac ggatgttcgg caaatccaga taaacaggac
    18721 gcggtttgac agacatagtc aattcctctg tagttatata tcgactcaaa aaccgtaaac
    18781 ccattgctac actgggttac ataaacgtta atttacctgt tttatcccat tttgaacagt
    18841 gtattttaaa aacaaactga tagattttga caaacacgcg tgaaaacagc agattaaaag
    18901 aaagattttt agttttgccc ccttcccgac acggtatcag catccgacct ccaaccccat
    18961 cctcaaaaat aaaatgccgt ctgaaaaaat ttcagacggc attgttttgc catatcggtc
    19021 aggctttcaa tttcgcatcg gcatcacgca acgcagtacg cagaccttcc tcgataacag
    19081 gatggtagaa cggcatatcc agcatttgcg gaacggtcat cttcatttga tgcgcccatg
    19141 ccaacaggtg cgccaaatgt tcggcggcag ggcctacgat ttccgcacca atgaagcggc
    19201 cggttgcttt ttcggcatac aggcgcatat ggcctttgtt taccagcatc acgcggctgc
    19261 ggccttggtt tttaaacgat acttcgccga tgacaaattc gtcgggttgg tattgcgcgg
    19321 taacctgcgc gtatttcaaa ccgacaaagc caatttgcgg attggtaaac accacgccga
    19381 tggtgctgcg gcgcaaaccg ccgccgatat tcggatagcg gcccgcgttg tcgccggcaa
    19441 tcttgccttg atcggcagct tcgtgcagca ggggcagttg attggatgcg tcgcccgcaa
    19501 taaagatatg cggaatactg gtctgcatgg tcagcggatc ggcaacgggt acgccgcgcg
    19561 catctttgtc gatattgatg ttttccaaac cgatattgtc aacgttcgga cggcggccta
    19621 cggctgccag catatattcg gcaacaaata cgcctttttc gccgtcttgc tcccaataga
    19681 cttctacatt gccgtccgca tcgagtttga cctcggtttt ggcatccaga tgcagtttca
    19741 attcttcacc gaacacggct ttcgcctcgt ctgaaacgac agggtcggaa atgccgccga
    19801 tgatgccgcc caagccgaaa atctcgactt tcacgcccaa acggtgcaat gcctgcccca
    19861 gttccaaacc gataacgccc ggtccgaaca cggcaacgct cttaggcagc gtatcccatg
    19921 agaaaacgtc gtcattgata atcaaacggt cgcccaaaga ctgccactgc ggcaggataa
    19981 cgggacgcga gccggtagca atcacgaaac tttttgccgt gatttgggta tggtcgtcga
    20041 tttggacggt atgctcgtcg ataaatttag ccgaacccat gatgcgtttg tcagcaggcc
    20101 attcttccac atcggcaacg acaaagccga caaaacgatc gcgctcggat ttaacgcgct
    20161 gcatcacttc ttcgccattg acgacgatac tgtctttatc caaatgcacg ccgaacgggt
    20221 cggtatgcaa tgcgtgatgg cgcgcctcgg cggcggcaat caagagtttg gaaggcatac
    20281 agcccacgcg cgcgcaggtc gtgccgaaca cattgttttc aatcaggtaa acattgtccg
    20341 aatgtaaacg ggcattgcga aacgcgccca taccggcagt accgccgccg attacgacga
    20401 catctgcttg aatttttttc ataatctttg tccttccgtt ttcgtctgaa acactgccga
    20461 cacggaatat atcggcttca gacggcattt aaatattttc ccaatcaaaa acattattca
    20521 gataaataaa aacaaaattt cgattgagtg caacaatatc caaatcctct tataaatata
    20581 gagttattcg gagcggtagt gtagaaccgc ccgaataact ctatccggta tatcagacag
    20641 tttaatcaaa ccgccttaag caaacagcta tcagttttta gccaagtaag cttccaaatc
    20701 ttcgctgccg ccgatgtatt taccgccgat gaagacttgc ggggcagtca tcttgccggt
    20761 aatggcgcga acggaagtaa cggttgcatc tttgcccaat acgatttctt cgtaagacaa
    20821 acctttgtct tgcagggctt gtttggcttt agcacagaat tggcagccgg gtttggtaaa
    20881 gatggcaaca gactcttgag ccttccaatt gggagcaacg aatttcagca tagtatctgc
    20941 atcggatact ttgaacggat ctcctggttc ttccggctcg atgaacattt tttcaaccac
    21001 gccgtcgtta accagcatgg agtaacgcca agaacgtttg ccgaagccca agtcttcttt
    21061 accgaccaac atgcccatgc cttcggtgaa ttcgccgttg ccgtcaggaa tcatgtagat
    21121 gttgtcggat tcttcttcgg ccgcccaagc gttcattacg aaagtatcgt ttacagatac
    21181 gcagtagatt gcgtcaacgc cgttttcttt gaacgcgccg aacaattcgt tgtaacgcgg
    21241 caggtgtgaa gaagaacaag tcggggtaaa tgcaccaggc agggagaata cgactacttt
    21301 tttgcctttg aacaaatcat cggtagacac atctttccaa gtgtcgccaa cgcgggtgcg
    21361 gaatactacg gaaggtactt tttgaccggt acgatcttgc aaagccattt tgagctcctt
    21421 aatagatagg tttaagaaat gattgtgaat cgctgggcat tctaccccga ataagtcgat
    21481 ttgtataatt tatagttcaa ataatattaa ttattcaaaa ctattaatca ccaacctcga
    21541 ccaactttta cagtatataa agccatgcct aaaaaaaaca agtcttattt gagaaaaatt
    21601 cttagaaact cccctacgct catttgaaaa cagaaatgcc gtctgaaaag tattcagacg
    21661 gcatccgatc acgttatccc tgcttattta gccagttcgg cacgcagttt gtgggttacg
    21721 ttcatcatca cttggagttg ttccagagtt tctttccaac cgcgtgtttt caggccgcag
    21781 tctgggttaa cccacagacg ttcaaccggt acaacctcga tggctttgcg caacaggtgc
    21841 tccacttcgg cttctgtcgg tacgcgcggg ctgtggatgt cgtaaacccc cgggccgatg
    21901 tcgttcgggt attggaattc gccgaacgcg gtcaagagtt ccatgtcgga acgtgaagtc
    21961 tcgatggtga tcacgtccgc atccattgca gcaatcgcag gcaggatatc gttgaactcg
    22021 gagtaacaca tatgagtgtg gatttgggtg ctgtcttcgc aaccggcaga ggacaggcgg
    22081 aaggattcgc ccgcccagtt caggtaggca tcccaatcgg cgcgtttcag cggcaagcct
    22141 tcgcggatgg caggttcgtc aatttggatg actttgatgc cggctttttc cagatccaat
    22201 acttcgtcgt tcagagccag tgcgatttgt ttgcacacgg tagagcgagg aatgtcgttg
    22261 cggacgaaag accattgcag aatggttaca gggccggtca acataccttt catcgggcgt
    22321 ttggtcaggc tttgtgcgta agtagaccaa gccacggtca tggcttcagg acggcttacg
    22381 tcgccaaaga taatcggtgg tttcacgcag cgtgagccgt agctttgtac ccagccgtat
    22441 tgagtgaatg caaaaccgct caacaattcg ccgaagtatt caaccatgtc gttacgctcg
    22501 gcttcgccgt gtaccagtac gtccaagtcc agtttttctt gctcttcaac caccaaggcg
    22561 atttcttttt tcatcgcggc ttcgtaatcg gcggcagaca gttcgccttt tttgaaggct
    22621 gagcgtgcct ggcggatttc ggtggtttgc gggaaagaac cgatgttggt agtcggtagc
    22681 agaggtaggt tcaaccatgc ttgttgcgct ttgatacggt cggcaaatgg agatttgcgt
    22741 tggtctgcgt tggcaggcaa atcggccagg cgtttggcaa cgtctgcacg atggatttcg
    22801 ctgctgttgg cacgggagtc ggcagcagct tggctggcgg cgagttcttc ggcaacagaa
    22861 tcacggcctt cgttcaatgc agctttcaga acgcgcaatt cttgggtttt ttgcagggtg
    22921 aatgccaacc aagagtacag gtcgggtttg ttggctttca gtttttcttc aactgacaag
    22981 tcaaatggag tgtgcagcag cgagcaagag ctggaaatcc acaaacggtc acccagtttg
    23041 gcttgcagag gctcgacagt ttccaaaact ttgttcaggt tggcgcgcca aatgttgcgg
    23101 ccgtcaatca cgccggcaga caggactttg tcgtagtcgg cgaacgcgtc cagttgctcg
    23161 ggggcgcgta ccaagtcgat gtgcagaccg tcaacaggca gggctttcaa caatgcggcg
    23221 tgttcggcaa cagaaccgaa gtaagtgctc aacaggattt tggcacttac tttgctcaaa
    23281 gtagcgtaaa cgtctttgta ggcttccacc cattctttag gcaaatcgac agccaaagca
    23341 ggctcgtcga tttgaatcca ctcggcaccg gcttcaacca aagcagtcag gatttcaacg
    23401 taaacaggca acagtttagg caacaggctc agacggtcga attcgacggc gcctttttct
    23461 ttacccaccc acaggaaagt caacggacct acaacggtcg gtttggcttt cagaccgagg
    23521 gcttgggctt cttgcagttg ttgaacatag tgtttggcat tggctttgaa ttcggtatcg
    23581 gcgtggaatt caggcaccaa gtagtggtag ttggtgtcga accatttggt catttcgata
    23641 gcgaattggt ctttgttacc gcgcgccagt tggaagaatt gttccaaaga caggttttgg
    23701 ctgtcgaagc cgaagcgggc gggaatcgcg ccggtggcga cttgcaggtc gaggatgtgg
    23761 tcgtagaaag tgaaatcgcc tacggcaacg aaatcggcgt tggcagcgac ctggtgtttc
    23821 cagtttttct cgcgcaagtc tttagcaaca gccagcaatt cttgctcgct gatttctttg
    23881 cgccagtatt tttcttgtgc gaatttcaat tcgcggaagg cgccgacacg cgggaagcct
    23941 gagaaatgta atgttgtcat gttgaactct ccagttggat tttgtaagga ccggttcaat
    24001 ccgaatcggc cggtattgta aatcagaatg gctcggatgg ggcggtgttt tgctttttag
    24061 acaccttaga tgccgtctga aactgtttga tacggcttta agggcgcacg cctaaaatat
    24121 ggcaaatggc gtaagtcagc tcgctgcggt taagcgtata gaagtggaaa tctttcacgc
    24181 cttcgcggga caggactttg accatatcga tggcgatact tgccgccacc agattgcgcg
    24241 taccttggtc gtcgtccaaa ccttcataca tttgcgacag ccagcttggg attttgacgt
    24301 tggttacttg agccatttta ccgagctgct tgaagttggt aacaggcaaa ataccgggga
    24361 cgatttccac atcgataccc aacatcacgc agcggtcgcg gaagcgcagg tagcgttcca
    24421 catcgaagaa gaattgggtg atgacgtggt tcgcgcccgc atcgattttg cgtttcaaat
    24481 taatcaggtc ggcttgtgcg gatttcgctt cgggatgcac ttcgggatat gctgctacag
    24541 agatgtcgaa gtcggcgacg gagcgtaata gcttaaccaa gtcttcggcg taaaacggtt
    24601 ttttctcata accggccggc tcgtctccgc gcagggcgac aatgcggcgg atgccgctgt
    24661 cccaataatc tttggcaatt tggcgcaatt cgtcgggaga agcgtcgata ccggtcaggt
    24721 gaggcgcggc ttccaagccg gtttcctgtt tgatgcgttt gacgatgccg tgtgtgcggt
    24781 cgcgctcgcc tgagtttgca ccgtaagtta cggaaacaaa tttcgggtgc aaggtttgca
    24841 ggcgatggat ggaatcccac agcatggttt ccatttgttc gtttttcggc gggaaaaatt
    24901 cgaatgaaac gttgatgtcg cctttcaaat cggaaaggct gttatttaac gcattgattt
    24961 cttttgcgta attcatggct gcgtaccttt tattatcttt tatatgatgt ttcaggcaac
    25021 ataataaagt tgcgccaaac atgagtcaat ttcaaaattt tcagatttat catgaaaatt
    25081 tctaatatat tacaaaaata gttaaatttc cttgtacagc ccttctaaac tatgctagag
    25141 tttgttatgt tataacactg aaagcaaggc aatatatgaa accgaatatt catcccgaca
    25201 attaccgaac cgtccttttt ttcgatagca gcgccaatga aggctggtta atccgctcct
    25261 gtgccgaaac acacggaaaa acgatggttt ggacagacgg caaagaatat ccgctgtttt
    25321 cgctggatac ttcttccgca tcccatcccg tctatactgg caaacagcgc aacgtcaaca
    25381 ccgaaggccg tgccagcaaa ttcaaccaac gtttccaatc cgtaatgtca tcgtttagaa
    25441 aggacaaata atgcaggttc tgtcttcact caaaaccgcc aaacaacgcc accgcgactg
    25501 ccaaatcgtc aggcgcaggg gcaaagttta cgtcatctgc aaaagcaatc cgcgttttaa
    25561 agcgcgccaa cgctgacccc ctgcccttcc tgcttcggtt gtaaatcccc tcctaccgca
    25621 agcccttttc aaaaaatgcc gtctgaaaca gaaaaatgcg tttcagacgg cattttttcc
    25681 gtcaatacga atccggaatg tgtttgaaat acagcataaa cagataccaa aacagcgtcg
    25741 cggcggccgc accgagcagc acccgggcac tgatttcggc aacttcgcgc agggcgcgtt
    25801 tctgcctgcg gctgaagagg cggttcataa tcagcgcggc aagtgcgaaa aagaaaaaaa
    25861 tacggaaaag tctgcctatc atgtcgggaa gcgaaaagta tggttcgggc gcggcggcat
    25921 ggggaaggat gtttcagcgc gtcaggctgc ttgtccgacc gtgtcaaaaa gtcatgccgt
    25981 ttgcgatata ataacgcttt ttgccgtatt tgttggaaca ggatatgagt caaaatgcct
    26041 cggtgggcat tgtaatgccc caaaaaattc cgtttgaggt gccgctggtt ttggaaaacg
    26101 gtaaaacttt gccgcgtttc gatctgatga ttgaaaccta cggcgagctg aatgctgaaa
    26161 aaaacaatgc ggttttaatc tgccacgcgc tgtcgggcaa ccatcatgtt gcgggcaggc
    26221 attcggcgga agataaatat acgggctggt gggacaatat ggtcggacct ggcaaaccga
    26281 ttgatacgga acgttttttc gtggtcggtt tgaataatct gggcggctgc gacggcagca
    26341 gcgggccttt gtcgattaat cctgaaacgg gcagggaata cggcgcggat tttccgctgg
    26401 ttacggtgaa ggactgggta aaatcccaag ccgcgcttgc cgattatctc ggcatcgggc
    26461 aatgggcggc ggttgtcggc ggcagcttgg gcggcatgca ggctttgcag tgggcgattt
    26521 cctatcccga acgcgtgcgc cacgccttgg tgattgcgtc cgcgccgaaa ctgtccacgc
    26581 aaaatatcgc gttcaacgat gtggcgcgtc aggcgatttt gaccgatccc gatttcaacg
    26641 aaggacatta ccgcagccgc aacaccgttc ccgctcgggg cttgcggatt gcccgcatga
    26701 tggggcacat cacctatctt gccgaagacg gtttgggcaa aaaattcgga cgcgatttgc
    26761 gttccaacgg ctatcaatac ggctatggcg ttgaatttga agtagaatcc tatctgcgct
    26821 atcaaggcga caaattcgtc gggcggtttg atgccaacac ctatttgctg atgaccaagg
    26881 ctttggacta tttcgatccg gcggcggatt tcggcaacag cctgacccgc gccgtgcagg
    26941 atgttcaggc aaaattcttt gtcgccagct tcagcaccga ttggcgtttc gcgcccgaac
    27001 gttcgcacga actggtcaag gccctgattg ccgcccaaaa atccgtgcag tatatcgaag
    27061 tcaaatccgc acacgggcac gatgcctttt taatggaaga cgaagcctat atgcgtgcgg
    27121 tcgccgccta tatgaacaac gtttataagg aatgtcagca atgaacctgc gcgatgattt
    27181 gcaactgatt tacgaccgga tacccgaagg cagccgcgtc ttggacttgg gctgcggcga
    27241 cggcgaactg cttgccgcat tggtcgaaca caaaaaatgc agcggctacg gcatcgaaat
    27301 cgacaccgac agcgtcatcg ccgcgatgtc gcgcggcgta aatgttatcc aagccgattt
    27361 ggaagaaggt ttaaccgcat tcaacgatca aagttttgat gtgattgtgt tgagccaaac
    27421 catccaagcg atgcagaata ccgaaaaaat cctgcgctgc ctgatgcgcg ttgccaaaca
    27481 ggcgattgtc agcttcccga atttcggcta ctggcgcaac cgcgtccaaa tcgcactcgg
    27541 cggacatatg ccggtttccg aacgtatgcc ctaccattgg tacgacacgc ccaatatcca
    27601 ttggtgcacg ctcaaagact ttgatttgtt gtgcgccaaa aacaacatcc gcgtcctcga
    27661 acgcgccgtg atgacgggca acagacaggt caaacatttc cccaaccttt tgggcagcct
    27721 ggcgttttac cgcgtcgggt aagacaggtt gagaaccttg tcggcaataa caggttcttc
    27781 ggttctatta acaacaggcc gtctgaaaaa tgaaacggca ggttttcaga cggccttttt
    27841 aatattggaa acaatagaat gaaaaacaaa acctcatcac ttctcttatg gcttgccgca
    27901 atcatgctga ccgcgtgttc cccgaacaaa gaagataaaa ccaaagaaac cggcgcatct
    27961 gccgcttcgt ccccggcatc cgccgcttcg tcttccgcgc cccaaaccga tttgcaaccg
    28021 gccgcatccg cccctgataa cgtcaagcag gcagaaagcg cgccgccgtc aaattgcacc
    28081 gacctgcacc ccgccaccgg cattgacgat ctcatgcagc aaatcgccga acacatcgac
    28141 tcggactgtc tgtttgccct ttcccatcac gaactggaaa cccgtttcgg cttacccgac
    28201 agtggctatg acaacataca gcggctgctg tttcccgaca tccgccctga agatcccgac
    28261 taccatcaga aaatcatact ggcaattgaa gacttgcgtt acggaaagcg cacgatcagc
    28321 cggcaggcac aagatgcctt gatggaacag gaacgccgcc tccgagaagc gacgctgttg
    28381 ctgacacagg gcagcgaaga aacccgcggg caaggcgagg agccgaaacg cacgcgttat
    28441 tttgaagttt cggcaacccc tgcctattcg agccggcaca acaacggact tggcggcaat
    28501 ttccaataca tcggccaatt gcccggctat ctgaaaatac acggagaaat gcttgaaaac
    28561 caatcactct tccggctgtc caaccgtgaa cgcaatcccg acaaaccgtt tttagacatc
    28621 cattttgacg aaaatggcaa aatcacgcgt attgtcgttt acgaaaaaaa catctacttc
    28681 aatccaaact tggggcgaag ataaaaaaat gccgtctgaa agcctttcag acggcatttt
    28741 tcaagtagga tatcaggcgc gtttgcggaa ttcgccggtg cgggtatcga tttcgacttt
    28801 gtcgccgttt tcgatgtaag acatcacttg gatttcggtg ccgccgacca gacgcgcggt
    28861 tttcatcact ttgccggaag tgtcgccttt gacagcaggc tcggtgtact cgacttcgcg
    28921 tacgatgatg gtaggcagtt cgacagaaat ggggttgcct tcgtagaagg taacttcgca
    28981 ttggtcttcc ataccgtcaa cgatgaattt caacgcgtcg ccgatgttgt cggcttcgat
    29041 ttcgtattgg ttgaattctt cgtccataaa gacgtacatc gggtcggcaa aatagctgta
    29101 cgtacagttt ttgcgggaca ggatgaccac gtcgaatttg tcgtcggctt tgtaaatggt
    29161 ttcggaagcc gcgccggtca gcaggttttt cagtttcatg ctgactttgg cggaagagcg
    29221 gccgcctttg atgtattcgg ttttttgaac gaccatagga tcgttgccga ccataaatac
    29281 attgccggcg cgcagttctt gtgctgtttt cattgtgatt ttccaatcaa atcggttgtc
    29341 gtaaaacgcg ctattctagc gtattttttg atgctttgaa acaaaggcgg cgagtttttc
    29401 ggatgcggaa ggctgcccga aaagataacg gctccaatcc tccgcgcctt gccgccagcc
    29461 gttttgatgt tgttgcaggg tttgccaaca ttcgaggcgt tgcgtggcgg ataaagcctc
    29521 tccgccgttg aggtcgtctg aaaggcggcg gtgtaccgat gcggtttcgg gcgagtaaaa
    29581 tccatgcgcc ttatcccaaa aggcgtggag tttatcgaga tggacattct cgtcttgcgg
    29641 gtagatgtgc caaaagaagg gtttgccggc aagctgggcg cgcacgaaac tgtcttcgcc
    29701 gcgtatcacg gcgcagtcgg cgaggtgcag cagtttgtcg aagtcctgtt gcggcacgaa
    29761 agggattttg acgaggcgga cggatgccgt ctgaaaaaca tcgccgtcgt tttgcagggc
    29821 atcttgcgga ataacgccgc tttgtttgag gctgtcgatg atttgcgtcc ccgccagcaa
    29881 cagtgtcatc gggctgcctg cctgtcgcca catttccagc cactttgccc aaacatcgct
    29941 ccgatagccg aaaagcagcc attcgggggc gtttttttcg ggaagcatca gccgctctcg
    30001 caaggcttcg gtatcgaaac ggacggcatt tcggtaatcg cgttcgcgta tcaacccgcc
    30061 gcttttttcg ctgaaaccca taaaccaaaa atatttttga acactctcct gcagcgaagg
    30121 catcagatgc agcctttcat tgctttcttc cgcgctcaaa tattcccaat tcagccaaag
    30181 cggcttgtgt cggcggatga tgtgcagcac attttcgggc aggtcgcagg caaaagtttc
    30241 gataacgata tcgggaacaa gggcagtatc gatatccgcc gcatcggaat gccaagtgcg
    30301 gacatgaata tcctgatgaa cgcagggaac atcgggcaaa tcagggcaaa gcgcacgcaa
    30361 ggcggacaca tcgtccgtcc acaaatgcac ctgccaaccg agttcgcggt gcaaaacacg
    30421 ggcgagccgc cacgaaacgc cgatgtcgcc gaaattgtcg atgaccttgc aaaaaatcca
    30481 acagacaaaa ggaggagtat tcatagaaat aacggaaaca agctaaaacg cgccgaaata
    30541 gtggaacaaa tacacaatca gcaaaataat cggaataaac agcaacatag tttgacgttt
    30601 caaatcaaac tcttgtttca aatgatgctt gatggtgtcg aaaaggacga atttaaacaa
    30661 aaacgtcgct tcgcaggcaa ggatgatgcc gttgatcaga tgctggagtt tgtcttcggg
    30721 cggattggcg gcgaaaacgg caagcgtcgc caacgggatg aggcagacgg caagccaacg
    30781 gacaagcagg tttcgagaca ttgcaaggct ttcaaaaaaa gcaaaacgcc attatcgccc
    30841 caagcgcacg ccttgtctaa cggacgcacc ggagatgccg tctgaagcct tgccgcagga
    30901 aaacaccgca ccgccgaacc tttaaatacg cccgagacgg gcgttccccg aaaaatcgga
    30961 cgctgccgcc gatgcctgag gacaaggcgg cagcaggcac gggcatattg aaaacccggc
    31021 gcgtcggttt gaa
//
LOCUS       DBBZXW010000011        30269 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.011, whole genome shotgun sequence.
ACCESSION   DBBZXW010000011 DBBZXW010000000
VERSION     DBBZXW010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30269
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.011"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            138..572
                     /locus_tag="ACJJD2_000483"
     CDS             138..572
                     /locus_tag="ACJJD2_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HGG7579082.1"
                     /translation="MNFALSVITFTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(621..1964)
                     /locus_tag="ACJJD2_000484"
     CDS             complement(621..1964)
                     /locus_tag="ACJJD2_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HGG7579083.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGVWLDEAGTLKAVEDTDAMAFTGSTYTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIRLANDSPFGLGACIYTADTGCA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(1969..2622)
                     /locus_tag="ACJJD2_000485"
     CDS             complement(1969..2622)
                     /locus_tag="ACJJD2_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HGG7579084.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQVRPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2773..3063
                     /gene="gatC"
                     /locus_tag="ACJJD2_000486"
     CDS             2773..3063
                     /gene="gatC"
                     /locus_tag="ACJJD2_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HGG7579085.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            3126..4571
                     /gene="gatA"
                     /locus_tag="ACJJD2_000487"
     CDS             3126..4571
                     /gene="gatA"
                     /locus_tag="ACJJD2_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HGG7579086.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGVKIGLPKEYFGEGNSADVQTA
                     LQNTINLLKTQGAELVEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4568..5500
                     /locus_tag="ACJJD2_000488"
     CDS             4568..5500
                     /locus_tag="ACJJD2_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HGG7579087.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5543..6973
                     /gene="gatB"
                     /locus_tag="ACJJD2_000489"
     CDS             5543..6973
                     /gene="gatB"
                     /locus_tag="ACJJD2_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HGG7579088.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPEATIAEIIEKHGLQQMTDTGAIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7065..8075
                     /locus_tag="ACJJD2_000490"
     CDS             7065..8075
                     /locus_tag="ACJJD2_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HGG7579089.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMDGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILE
                     LHIRRRKNGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQNSSRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8204..8836)
                     /gene="pdxH"
                     /locus_tag="ACJJD2_000491"
     CDS             complement(8204..8836)
                     /gene="pdxH"
                     /locus_tag="ACJJD2_000491"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HGG7579090.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            9067..10116
                     /locus_tag="ACJJD2_000492"
     CDS             9067..10116
                     /locus_tag="ACJJD2_000492"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG7579091.1"
                     /translation="MSKQPTSKRQWRDGVAPSAKKTAKPFKSKARPKDETDKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(10185..11726)
                     /locus_tag="ACJJD2_000493"
     CDS             complement(10185..11726)
                     /locus_tag="ACJJD2_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HGG7579092.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVSTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVVETFAVLGLLYLALMMFGAFTICVPADGWK
                     PEGYIAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(12019..13374)
                     /gene="xseA"
                     /locus_tag="ACJJD2_000494"
     CDS             complement(12019..13374)
                     /gene="xseA"
                     /locus_tag="ACJJD2_000494"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HGG7579093.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAEERKKPLPVRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGTGSEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            13571..14392
                     /gene="nadE"
                     /locus_tag="ACJJD2_000495"
     CDS             13571..14392
                     /gene="nadE"
                     /locus_tag="ACJJD2_000495"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HGG7579094.1"
                     /translation="MMRIFSTGGTMDTQAVITHIARWLDEYATQANAKGFVIGVSGGI
                     DSAVVSTLAARTGRPTLLLDMPIRQHPGQLERARLHIRNLQRQYANVSAQTADLTDTF
                     QTFEQTVGIHQTAFDNQPLSLANAKSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(14463..14936)
                     /gene="dnrN"
                     /locus_tag="ACJJD2_000496"
     CDS             complement(14463..14936)
                     /gene="dnrN"
                     /locus_tag="ACJJD2_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HGG7579095.1"
                     /translation="MTDFSVWETAPFGATVDYILQRYHNVHRAQFEELVPLAQKVVQV
                     HADTFPAEIARLLADMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            15234..15566
                     /gene="trxA"
                     /locus_tag="ACJJD2_000497"
     CDS             15234..15566
                     /gene="trxA"
                     /locus_tag="ACJJD2_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HGG7579096.1"
                     /translation="MSSELIIHTSDAAFEKDVLNSDTPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(15619..16566)
                     /locus_tag="ACJJD2_000498"
     CDS             complement(15619..16566)
                     /locus_tag="ACJJD2_000498"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7579097.1"
                     /translation="MTDITPFANRLGKNIKHLMKWVKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWAKRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMLDILDIQRDHKKLIDGAVKLLASDGILYFSNNLSSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            16894..18282
                     /locus_tag="ACJJD2_000499"
     CDS             16894..18282
                     /locus_tag="ACJJD2_000499"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG7579098.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGWRGDHKPSKEGFGGKTRGEGFKKEGFKRDGFKKTGEGFKGKRKAGDS
                     FAGKGERRYKDR"
     gene            complement(18874..19428)
                     /locus_tag="ACJJD2_000500"
     CDS             complement(18874..19428)
                     /locus_tag="ACJJD2_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579099.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            complement(19513..20013)
                     /locus_tag="ACJJD2_000501"
     CDS             complement(19513..20013)
                     /locus_tag="ACJJD2_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579100.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            20417..21613
                     /locus_tag="ACJJD2_000502"
     CDS             20417..21613
                     /locus_tag="ACJJD2_000502"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HGG7579101.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALADALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLCRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            complement(21716..22960)
                     /gene="clpX"
                     /locus_tag="ACJJD2_000503"
     CDS             complement(21716..22960)
                     /gene="clpX"
                     /locus_tag="ACJJD2_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HGG7579102.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            23151..23522
                     /gene="rbfA"
                     /locus_tag="ACJJD2_000504"
     CDS             23151..23522
                     /gene="rbfA"
                     /locus_tag="ACJJD2_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HGG7579103.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            23555..24478
                     /gene="truB"
                     /locus_tag="ACJJD2_000505"
     CDS             23555..24478
                     /gene="truB"
                     /locus_tag="ACJJD2_000505"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HGG7579104.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKARDITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVSHFPQTVLNDYAVHMLHCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            complement(24520..24630)
                     /locus_tag="ACJJD2_000506"
                     /pseudo
     CDS             complement(24520..24630)
                     /locus_tag="ACJJD2_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            24799..27006
                     /locus_tag="ACJJD2_000507"
     CDS             24799..27006
                     /locus_tag="ACJJD2_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HGG7579105.1"
                     /translation="MKTDIQTELTQALLPHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNSQPASQPASQPASQPASQPASQP
                     ASQPASQLYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRYTADGKQAVGEIKR
                     HSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYYFVKKKQQDSFGYNTNFK
                     LSTWLTFMKNRLSIAKELLTDDGIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIM
                     NLKGNNDEYAFAGTHEYTLVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGFYKKGAPM
                     RATGTEDKREDRPEMFYPFLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEKYE
                     NLGYNFILPIADKQWGRWRWGYSIKNKARLQTDIIVSQSKNGISLYKKQRPELDDLPT
                     KKPKTIFYKPEYSSGNGTEQMKNLFGEKAFKNPKPEELIQDFITITTNESDIVLDYHL
                     GSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGEQGGISKAVNWQGGGEFVY
                     AELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLP
                     LDEQKQMVLEMLDLNQMYVSLSEMDDEQFADCLNDDDKAVSRAFYQAEKKNGE"
     gene            26996..29782
                     /locus_tag="ACJJD2_000508"
     CDS             26996..29782
                     /locus_tag="ACJJD2_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HGG7579106.1"
                     /translation="MANNKTLFEVIENRKAVYLEDGDDEKYRLPKFVSNNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPTHAKFLFTEKILQGDTVIPIRKVETFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNAQTKGKKQGELDLEVELKA
                     NAGNAEIERKGWEHMVLELLLNKNGNPSQNVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYLAFLNWAENVQAVDFSFLTTFSTSLNDSDSDNANEQGKTRTEQALKFMQE
                     KGVEFAHLADWVKQNYQKHNVIITNSETNKTKTEKTDSETEKLLNNLEAADNPIRAIF
                     TVDRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAF
                     EGKQPNKRKFDNDMQHELRILEELFYYAHDEQSRYISELKNELRKDGYLPEKDDDKVL
                     ATFKLKSEFAANKDFRELLIWANKKIPNPNAKSNNADSLKANPQTLSFQVHGNQLLQE
                     TQFTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSK
                     LDIQNRNELQNNLLKDWQIEFLGLGQDKQVRLDDKLAGCLKILEMVEKHLNESDMPFI
                     GTKEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISA
                     RLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQI
                     FIEPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFT
                     ESFPLGAASLEKMK"
     gene            complement(29926..>30269)
                     /locus_tag="ACJJD2_000509"
     CDS             complement(29926..>30269)
                     /locus_tag="ACJJD2_000509"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HGG7579107.1"
                     /translation="SNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDIL
                     KAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASI
                     LRGKDWGRETV"
BASE COUNT         7989 a         8108 c         7410 g         6762 t
ORIGIN      
        1 gggaatctgt ttcaccccaa tatataaagc accatattaa ggcggagttt cttccccact
       61 ttgacccgaa cccggaaaag acaccgccca agccaatcct gatgctgccc cgacagccaa
      121 cccttaagga aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt
      181 tcctgcccgt cccgcctgcc ggagccgccg tctttacttg gaaggacggc ggcggcaaca
      241 gctattcgga tgtaccgaaa cagcttcatc ccgaccaaag ccaaatctta aacctgcgga
      301 cgcgccaaac caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg
      361 gcgcggcaca ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa
      421 agaaaagaat tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa
      481 tgaacctgaa ggcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat
      541 acaataacgc cgtaaacaaa tactgccgtt gagcagcctc atcgaaaacc ccatgccgtc
      601 tgaagcggca cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac
      661 agcccgaatt cggacaattc gcgcccgtaa ccggaatctt taacccctcc gaaaggcagg
      721 cgcaaatcgc tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca
      781 aaccgccagg cgcatccggt atcggcggta taaatgcagg caccgagccc gaacggggaa
      841 tcattggcaa ggcggatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc
      901 ccgaatactt cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg
      961 ggataaaacc agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt
     1021 gaaacggcat cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt
     1081 gcaagcgtag tatcgggatg tttggggtcg cccattttca atttagcgca ttcggcaaga
     1141 aacagcgtga taaaacgatc ggctgcggct tcggttacga tgatgcgctt ggcggcgtta
     1201 cacgattgcc ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc acgctccaaa
     1261 tcagcatcgg gcatcacgat aaaggcgttg ctaccgccga gctccaacac ggttttctta
     1321 aggtttgcgc ccgcgtgtgc cgcaaggatg cgccccgtat acgttgaacc ggtaaacgcc
     1381 attgcatcgg tatcttcaac cgccttgagc gtgcccgcct catccagcca cacgcctgcc
     1441 agaggaatgc cgtctgaagc caaatcgaac agtgcctgac tgacgcgtgc cacgctgggc
     1501 gcgggtttga cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc
     1561 tgccagacgg gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcgaagcgc
     1621 acctgactca aactcgcctg cgtcgcgatg gttttgtggg caagcagttc gggggcaagg
     1681 cgggcgtaat agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcaag
     1741 cagcgtccga cttcctcaca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg
     1801 tcggcaaatt tttgcaggcg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg
     1861 ccgcgcattt tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg
     1921 cggtaaagcg tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag
     1981 ttgcgggaat atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat
     2041 catacccatg atacggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt
     2101 cccggcaacg attaaaatgg cataacaaat cgcactgacc accaaaccgg ccacgataat
     2161 cagcgcgatg tcgctgtacg ttttggctgc cgaagcgtaa ataatcacgg tcgaaatacc
     2221 gcccgggccg atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg
     2281 ggcggggcgc acctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc
     2341 gttgccgttc atcatcgaaa tggcaatcag caacaccaaa attccgccgc cgacctgaaa
     2401 cgaaccgacg ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc
     2461 aatcacggca aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct
     2521 gtgcccgttg gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa
     2581 aaaagccaca atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa
     2641 acccgtgcgg caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa
     2701 ttaaaaattc aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca
     2761 aggatgcttt tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga
     2821 ctgcacctga ctgcggaaga aaaagaaaaa tcgcttcaag aattaaacga cattttcact
     2881 atggtcgaac agatgcaaac catcaacaca gacggcatcg aaccgatggc gcacccgcac
     2941 gaggccgccc tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat
     3001 caggcgggtg ctccggaagt acgcaaccgt ctgtacatcg taccgcaagt tatcgaagaa
     3061 taatccgaat atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa
     3121 gatttatgac ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt
     3181 ccgccgtcga actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca
     3241 acggctatat caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac
     3301 gtatcgcgca gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt
     3361 tctgccaaac cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc
     3421 cctacaccgc caccgtcgtc caaaacctgc tcgacgaagg tatggtaacg ctcggccgca
     3481 ccaatatgga tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggtgcagcca
     3541 aaaacccatg gaatcttgag cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg
     3601 ttgccgcgcg cctcgcccct gccgcgctcg gttcggacac cggcggctct atccgccagc
     3661 ctgcatcgca ctgcggcatt accggcatca aacccacata cggcacggtt tcccgcttcg
     3721 gtatggtcgc ctacgcctcc agcttcgacc aggccggtcc gatggcgcaa accgccgaag
     3781 actgcgcgat tctgttgaac gcgatggcag gtttcgaccc caaagactcc accagcctcg
     3841 aacgcgaaaa agaagactac acccgcgatt tgaaccaacc gctcaaaggc gtgaaaatcg
     3901 gcctgcccaa agaatatttc ggcgaaggca acagcgccga tgttcagacg gcattgcaaa
     3961 atactatcaa cctcctcaaa acccaaggcg cggaattggt cgaagtttcc ctgccgcaaa
     4021 ccaagctgtc catccccgcc tactacgtcc tcgcctccgc agaagccagt accaaccttt
     4081 cacgttacga cggcgtacgt tacggacacc gtgccgccca attcggcgat ttggaagaaa
     4141 tgtacggcaa aacccgcgcc gaaggtttcg gcagcgaagt taaacgccgc atcatgatcg
     4201 gcacttatgt actgtcacac ggctactacg atgcctacta tctcaaagcc caaaaactgc
     4261 gccgcctcgt tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc
     4321 cgaccgcacc cactgcagcc ccaaaaatcg gagcggatgc ttcgccggtt gaaacctact
     4381 tgagcgatat ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg
     4441 caggcttcag cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg
     4501 aagccaaaat cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac
     4561 gacccgaatg aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta
     4621 tgcgccttta tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa
     4681 agaaatttac gccttcgagc agtttgtcaa cgcatcccct atccgtcagg ggctgttcct
     4741 ccactgcccg caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg
     4801 caaacgccgt ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac
     4861 agacatcctg caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga
     4921 cggcatcagc ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt
     4981 atctttgcgc gacgaagcag gcaaccggct gtatatggcg accttcgcct ttgtcggcac
     5041 acacctgctg acagcctccg tacaagggcc ggcgggtgaa gaagccaaag acaccgtccg
     5101 ccgcataacc aaacaactcc acggcttgcg tccccaacaa ctgatggtaa ccgccctgca
     5161 atatttcgcc gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt
     5221 caaactgcgc tggaaactta aaaagcgtgt caaaatgaat tacgacgcat tctggcagga
     5281 atacggcgca agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa
     5341 agaccttacc gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct
     5401 ggacaatatg gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga
     5461 cggcatccaa acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga
     5521 tattttagag aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt
     5581 ccaattgaac accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc
     5641 caacgcgcac gccggcgtag tggaatgtgc tttgccgggc gtactgccgg taatgaaccg
     5701 agaagtcgtt gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa
     5761 aaacgtgttc gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag
     5821 ccagttggac ttaccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt
     5881 gaaaaccatc aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtacatga
     5941 aggcttgaac ggcgcgaccg gtatcgattt gaaccgcgcc ggcacgcctt tattggaagt
     6001 cgtatccgaa cccgaaatgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca
     6061 cagcttggta acctggctga acatttgcga cggcaatatg gcggaaggtt cgttccgcgt
     6121 cgatgccaac gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat
     6181 taaaaacctc aattccttcc gtttcttgga gcaggcgatt aattacgaag cagaagcgca
     6241 aatcgagatt ttggaagacg gcggcaaagt acagcaggca acgatgctgt ttgatcccga
     6301 aaaaggcgaa acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc
     6361 cgaccccgat ttgctgcccg tcatcatttc agatgcccaa atgcaaaaag ccaaagcaga
     6421 aatgcccgag ctgccgaaag aaatggcagc gcgtttcgtg gcggactacg gcgtgtccga
     6481 atacgacgcg cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc
     6541 caaagagagc ggacaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc
     6601 actgaacaaa gaaggcatgg aacttgccga cagcccgatt accgctccgc gcctcgccgc
     6661 gctggtaggc aaaatcgccg acggcacatt aagcagcaaa ttagcgaaaa aagcctttga
     6721 agccatgtgg gcagaacccg aagccactat tgccgaaatc atcgaaaaac acggtttgca
     6781 gcaaatgacc gataccggcg cgattgaagc catggtggac gaagtgctgg caaacaacgc
     6841 caaagccgtg gaacagttca aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca
     6901 agtgatgaag gccagcaaag gcaaagccaa ccccgcgcag gttcaagagc tgattaaagc
     6961 caaacttgcc tgacaagcaa gatgccgtct gaaacccaaa tccgacgttc agacggcatt
     7021 ttcacagtct gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta
     7081 ccctgcccga ccaaaccacc tttgccgcca acgacggcga aaccgttttg gccgctgccg
     7141 cccgacaaaa cctcaacctg ccccattcct gcaaaagcgg tgtctgcgga caatgcaaag
     7201 ccgaactggt cagcggcgat attcaaatgg acggacactc ggaacaggct ttatccgaag
     7261 cagaaaaagc gcaaggcaag attttgatgt gccgcaccac cgcgcaaagc gatatcagca
     7321 tcaacatccc cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg
     7381 aaagtattat tttcaaacac gatgtcgccc tcctgaaact tgccctgccc aaagccccgc
     7441 cgtttgcctt ctacgccggg caatacattg atttactgct gccgggcaac gtcagccgca
     7501 gctactccat cgccaatccg cccgaccaag aaggcatttt ggaactacac atccgcaggc
     7561 gcaaaaacgg tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag
     7621 gcatcgtccg cgttaaaggt ccgctcggtt cgtttaccct gcaggaagat agcggcaaac
     7681 ccgtcatcct gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc
     7741 ttatccgcca aaacagcagc cgcgccgtcc atttctactg gggcgcgcgt catcaagatg
     7801 atttgtatgc cctcgaagaa gcacaagggt tggcatgccg tctgaaaaac gcctgcttca
     7861 cccccgtatt gtcccgcccc ggagagggct ggcagggaag aaaagggcac gtacaagaca
     7921 tcgcggcaca agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg
     7981 ccatgaccga acaagcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt
     8041 ttttctccga cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg
     8101 ctttccgttc ggaacacaaa aaacttcccg tccgtatttt ccccataaaa aatgccgtct
     8161 gaagcccgat tccggttttc agacggcata tgttttttcc tgttcaaggc gacagccgct
     8221 cgcgtatcca gccaccatcc agcaaacggt attggatgcg gtcgtgcagc ctgctcggcc
     8281 tgccctgcca aaactcaatc aaatcgggaa tcacaatata gccgccccaa tgcggcggac
     8341 gcggcacgtg caaaggatgt ttgagtccga ccgccgccgc ctttgccacc aataccgcct
     8401 tgttcggaat cacctcgctc tgcgcacttg cccacgcacc caaacggctc tgatacgggc
     8461 ggctctcaaa atattcgtcc gacaacttct ccgccagcct ttcaacacgc ccttccacgc
     8521 gcacctgacg ctccagctcc ggccaaaaaa acgtcatcgc cgcaaatgga tgagcatcca
     8581 gcgaacgtcc cttacggctg tgataattcg taaagaaaac aaaaccttca gaattaactt
     8641 ccttcagcag caccatacgg ctgttgggtc tgccgcgtcc gtcgaccgcc gccacattaa
     8701 ccgccgtcgg ctcgttgacc tgtgcgcgta ccgcctcgtc caaccaccgc tcgaactgct
     8761 cgatcggatt gtcggcgcaa tcgccttccg acaattcccg tttactgtaa tcttcccgaa
     8821 tattgtgcaa atccatttac cgctcctctt gtcatttgaa agattctacc cccgcacgca
     8881 aaccgatttc aaccgttgca caaactttgc ctcgcttctc caaacctcag gacacaacga
     8941 tttcatccgc aaaaccgccg cataaggtac aatatcgaac cgtccgaccg agggcggcat
     9001 tttatcaacc cgtcctgccg cacacgccgc agaagaaccg ccttatcagg cgagttagga
     9061 aaaatgatgt ccaaacagcc caccagcaaa cgccaatggc gcgacggcgt agccccgtct
     9121 gccaagaaaa ccgccaaacc tttcaaaagc aaagcccgtc ccaaagacga aacggacaaa
     9181 accgcatccc aaccttacgg acaaaaagct tcagacggca tcaaacctca aaacctcccc
     9241 aaacagcgcg ccgccaaagc caaaaaactc gtcgtccgca atcccaacca aaaaattatg
     9301 gaacacgcgc gcgatttaaa agaacgccgc agcgacctat cgcgcatgga acccgaacgc
     9361 ctgcaaaaag tgcttgccgc gtccggcgtc ggctcgcgcc gcgaaatgga agaatggatc
     9421 aacaacggct gggtaacggt caacggcaaa accgcgcaac tgggcgacaa agtcaccccc
     9481 gacgaccacg ttaccgtcaa aggcagcatc atcaaactca aatgggccga ccgcctgccg
     9541 cgcatcatcc tatattacaa acaagaaggc gaaatcgttt cccgcgacga cccgcaaggc
     9601 cgcgtcagca tattcgaccg cctgccgcag gccgccagca gccgctgggt cgccatcgga
     9661 cgcttggaca tcaacaccag cggacttctg attctcacca cctccggcga actcgtccaa
     9721 cgtttcgccc accccagctt cgaagtcgaa cgcgaatacg ccgtgcgcgt cttgggcggg
     9781 ctgaccggcg aacaaatgcg cgtcctcacc gaagaaggcg tgatgctcga agacggcttg
     9841 gcaaaagtcg aacgcatccg cgaacaaggc ggcgaaggcg cgaacaaatg gtacaacgtc
     9901 gtgattaaag aaggccgcaa ccgcgaagtg cgccgcattt ttgaaagcca agggctcacc
     9961 gtcagccgcc tcgtgcgcgt cggcttcggt cccatcggac tgcccaaccg cctcaaacgc
    10021 gggcagttct acgaactcaa ccccgccgaa gtcgccaaca tcatcaaatg ggcggacatg
    10081 ctgctgccgg gcgaacgccg ccgcaaaaaa gcctaaaccc gccaaaacac aaaaatgccg
    10141 tctgaaacat ctgctgtttc agacggcatt ttattcgggc gttttcagga gaaaaggtcg
    10201 agtgctttga caaagaccat caccacgccg taggcgagcg gtatgacggc caatgcccaa
    10261 cgccaccaga ccgatatgcc gccgccggaa actttttcgc ccacaaggta agcgtcggat
    10321 atggcggttt cgtcatcggg gttgccgctg tgtgcggcgg ttttgatgtc tttttcgtgg
    10381 tgtttttcgt gtacggattt gacggcgagg ttgcacaaca aaccgataat cagcagaccc
    10441 gccatgatgt acatggttac gctgtatgcc tgtgccgccg gtatgccgct gtcgatttgg
    10501 ctttggcgta tgtaattgac cagtaccggg ccgatgacgg cggcggttga ccaggccagc
    10561 aggatgcgcc cgtgaatcgc gccgacctga taggtgccga acaggtcttt caggtaggcg
    10621 ggaatggcgg caaatccgcc gccgtacatg gaaataatca cgcaaaagcc gatgatgaac
    10681 agggctttgc tgccgccctc gccgatggag ggaacggcga aatacagcag cgaaccgagt
    10741 acgaagaaga tggtgtaggt gtttttgcgt ccgattttgt cggaaacgct cgaccacaaa
    10801 aagcgtccgc ccatgttaaa caggctcagg aggctgacga agcctgccgc cgcacctgcg
    10861 ccgactgctg cctgcctgcc tatggaggtt tcggaaaaga gttcctgaat catcacggat
    10921 gcctgaccca atacgccgat gccggcagtt acgtttaggc acaataccca gaacaacagc
    10981 caaaactgcg gcgttttcat ggcttgggac acgttgacat gattgctgct gaccagcttg
    11041 ttttgcgttt tcggcgcgat atagccttca ggtttccagc cgtcggcagg tacgcagatg
    11101 gtaaacgcgc cgaacatcat cagtgcgagg taaagcagtc ccaatacggc aaaggtttca
    11161 acaaccccga ccgaagcggc gtttgaaaag gcgttcatca gtgatacgga aagcggtgag
    11221 gccagcattg cgccgccgcc gaaacccata attgccaaac cggtcgccat acccggcttg
    11281 tcgggaaacc atttcatcag tgtggaaacc ggcccgatgt agcctaagcc taagcctacg
    11341 ccaccgatga cgccgttgcc caaataaagc aggaagaggt tgtgcgtact cacgccgaat
    11401 gcggatacga agaagcccag gctgaaacag caggcggcgg caaatatggc tttgcgcggc
    11461 cctacccgtt ccatccatgt gccgaacagg gcggccgacg cgcccagcat cgcgagtgcg
    11521 atactgaaaa tccaacctac ggtcgtcagc ttccaatctc cggccgccga ttcggttatg
    11581 ccgataagtt tggtcagcgg cgcgttgaat acggaatagg cgtaaatctg cccgatggca
    11641 aggtgtaccg ccaatgctgc gggcggtacg agccaacggt tgaaacccgg cttggcaatg
    11701 cttgcctcac ggtctaaaaa cttcataaca tcctctttct gtcagttgaa aaataaaatt
    11761 tcatttgctc aatggaaact tattgaaaat tataaaaaaa tatcgggtcg ggtttttatc
    11821 cgccccaaga tgcgccgtct gaaacatttc gggtgtacgg aaaggtttct gttttttccg
    11881 acaaattcct gcggcttttc gcttccggat tcccgctttt gcgggaatga cgaattaaag
    11941 attatcttaa ggtcaaggga ctggattccc gctttcgcgg gaatgacggc ggagggggag
    12001 cggtttttcc gattgggttt aaatgcaatc gaacaaatcc tgctgccctt gttctttgct
    12061 tacgcgcacg tcggtttcgc cgtcggcgaa ggtaatgtgc agcttctgcc cctgcttcaa
    12121 aacatcggcg ttgcggatga cttgtccgcg tgtatctttg acgacggaaa agccgcgttc
    12181 caaaatgtgc tgcggcgaaa cggcttcgag caatgcggct tgggcggtca ggctttggcg
    12241 gcggtgggta agcagttggc tgaaggcggc gggcaatgcc gtctgaaggc ggacgatgtt
    12301 gtttttgcaa acggaaacat caggacggta atgttgcagg gcttgggttt ggcgttcaaa
    12361 acgggcggtg tgggcacgga ggttttgctt catagagtaa gacagcgttt gcgccagctt
    12421 gccgattgaa gcgcgctgct catcaagttt ttggcgcgga tgacggattt gccgcgcaag
    12481 ccagtcgagt ttttggctgg catcgaaata gcgttgttcc aaaacggttt tcagacggcc
    12541 ttgcgcctgg gcgagacgat gtagcgattc ttggcggttg gggctgacca gttccgccgc
    12601 gccggtcggc gtgggcgcgc gcacgtcggc gacaaaatcg gcaagcgtga aatcggtttc
    12661 gtgtcccacg ccactgacga cgggaaccgt gcaggcttcg attgcgcgta cgaccggttc
    12721 ttcgttaaac gcccacaaat cttcaatgct gccgccgccg cgacagacaa tcaacacgtc
    12781 gcattcggcg cgttgcgatg cggttttaat cgcttgggca atctgaaact cgctgcctgt
    12841 gccttgaaca ggtgtcggat aaacgataac gggaatttcg ggcgcgcggc gtttcaaggt
    12901 ggttacaaca tcgcgcaatg ccgccgccgc caaactggtt acgatgccga tacattgagg
    12961 gcggacgggc aacggttttt tgcgttcctc cgcaaacgcg ccttccgcct gcaactgcgc
    13021 cttcaaccgc tcataggctt cgtaaagctg ccccaaacct ttgagccgca cttcgttcac
    13081 ggtaatctga aattcgcccc gcgtttcata aatactgatt ttgcccgcca cttcgatatg
    13141 gtcgccttct ttcaaaggtt tcgccaaacg cgccgccgca cccttgaaca tcgcgcaacg
    13201 cacctgcgcg cggctgtctt tgagcgagaa ataataatgc ccgctggcgg cacgggtcag
    13261 gttggacact tcgcccgcaa tccacagacc ggcaaggtgg ttttccaaaa tacttttggc
    13321 aaatgcgttc aactcggaaa cggacaacac gtcagaatgg aaaaaatcag acatcgaatc
    13381 aatcaaatag taaaaaatat gaatatgttt tgaagcccaa ggcggcatag agccgcctaa
    13441 attgtcaaca atattataac acgcgccatc ttgccgcccg actttgcccg tatgactttt
    13501 ttaagcgggg aatgggaaaa atattcatca acctgcctgc aatctattca aattgaaccg
    13561 ccgacaagct atgatgcgga tattttcgac aggaggaacc atggatacgc aggcagttat
    13621 cacacatatc gcccgatggt tggacgaata cgccactcag gcaaatgcaa aaggattcgt
    13681 cataggcgtt tccggcggca tcgattccgc cgtcgtctcc acactcgccg cccgcaccgg
    13741 ccgccccacg ctgcttctgg atatgccgat acgccaacac cccggccagc ttgagcgggc
    13801 aaggctgcac atccgcaatc tgcaacggca atatgccaat gtaagcgcgc aaacggccga
    13861 tttgaccgac accttccaga cctttgaaca aaccgtcggc attcatcaga cggcatttga
    13921 caatcagccg ctttccctcg ccaacgccaa aagccgcctg cgtatgctga ccctgtacta
    13981 ctacgggcag atacacggac tgctggttac ggggacaggt aataagattg aagatttcgg
    14041 cgtgggattt tttaccaaat acggcgacgg cggcgtagac atcagcccga ttgccgacct
    14101 gaccaaaacg caggtttacc ggcttgccga agcattgggc gtggacgagg cgattcaaaa
    14161 agccccgccg accgacggcc tgtgggatac ggaacgcacc gacgaagaac agatgggcgc
    14221 aagctatccc gaactggagt gggcaatggg cgtgtacggc acgcgcaaac ccgaagattt
    14281 tgaagggcgg cagcgcgaag ttctggaaat ctatacgcgg ctgcaccgcg cgatgcagca
    14341 caaaatcaac ccgattcccg tgtgccgcat tccgcccgaa ttgttgggct gaaacgtgga
    14401 aatgccgtct gaagcggaaa aaccgtattt cagacggcat ggaaatatcc ggctcccgtt
    14461 ccttaagaat cgagtacgcg ggcaaacaga atatcgtttt ccaaatgaat gtggtcgttc
    14521 aaatcctcca ccatttcttt ggccaaagcg taaaggcgcg tccagcttcc gcaagcccct
    14581 tctggcggtt ggaaattgtc ggtcagctct ttgagccgtg cgatggcgcg gtcgtgttct
    14641 tcgtgttcgt gcatcatcac gctgatgggc attgccgcac cgcgtccgac accctgatta
    14701 atcatcggaa acagcatcct ttcctctttc atcatatgca tcagcagttc gttctgcata
    14761 tcggcaagca gcctggcaat ttccgccgga aaggtatcgg catggacttg gaccactttc
    14821 tgcgccagcg gcaccaattc ttcaaattgt gcgcggtgga cattgtggta gcgttgcagg
    14881 atataatcga cggttgcgcc aaagggggct gtttcccaaa cggaaaaatc agtcattgca
    14941 gtgttccttt tatagggttt cgggtttggt tttgaacatt catactttaa gaatctattt
    15001 aaacggagca tacaccgccc gcgcgtttct gtacagcttc aaaaacattc cttacacttt
    15061 gataataaaa gtaattttca aaaataaaat actgtccgaa ccgtttttta gaatttgcaa
    15121 aggcgattgg ggcggtacag aaaaactatt atcccgcccg cccacttgaa atttttatgc
    15181 ccaagcccta tcctgcacgc tatcgtgcca atcccaaccg aaaaggaaaa ataatgagca
    15241 gcgaattgat tatacacacc agcgatgccg cttttgaaaa agacgtttta aattcagata
    15301 cccccgtcct gctggacttt tgggctccgt ggtgcggccc ctgcaaaatg attgccccga
    15361 ttttggacga catcgccgcc gaatttgaag gccgtctgaa agtggtcaaa atcaacatcg
    15421 acgacaacga agccaccccg tcccgtttcg gcgtgcgcgg cattccgacc ctgatggtgt
    15481 tcaaaaacgg cgaagtcgtg gctaccaaag tcggcgcatt ggcaaaaggt cagctgaccg
    15541 cctttgtcga agcctccatc gcctgataaa gcgcaatcga aaaagccgcc ggaagattcc
    15601 ggcggctttt tcgcaccctt aagatttgtg gcggatttcc cagcacctat ggattttttt
    15661 gttgcggaaa tcttcgggaa cggattgttt ggaaatgtct ttgacggcgt attgttccga
    15721 taccaagtcg tctaagacga agctgctcag gttgttggaa aagtacaaaa tgccgtctga
    15781 agcgagcagc ttcaccgcgc cgtcaatcag ctttttgtgg tcgcgctgga tgtcgagaat
    15841 gtcgagcatc tttttgctgt tggagaagct gggcgggtcc atcacaatga ggtcgaaccg
    15901 cctgccttcc ccatatgccg tctgaagata ttgaaacacg tcggcgcgga cgattttgtg
    15961 tcgttccgta tcgatgccgt tcaattcaaa attgcgtttc gcccaatcaa gatatgtgtt
    16021 ggacaaatcg acggtttcgc tggatgccgc gccgccggtg gcggcataga cggtgaagct
    16081 gccggtgtag gaaaacaggt ttaaaaaacg tttgcccgcc gccgtttcgc cgactttttt
    16141 gcgcgtgttt cgatgatcca aaaaaagccc cgtatccaaa tatttatcaa ggttgaccca
    16201 aaacttgcgg ccgttttcgg tgatgacgaa atcgtcgccc gccttgccgg ttttctcgta
    16261 ctgctgcaaa cctttttggc gttcgcggcg tttgaggcgg atttgttcgg gcgcaaaacc
    16321 ggtaacgaaa gcgacggctt ccaagacttc ggcaagccac gcttcgtatt cttcgggccg
    16381 catcagccag ccggtatcgt attcctgaag gtggattcga tcgccgtaaa catcggcggc
    16441 aaaggggaat tgggggatgt cgcggtcgta aatgcgccag gcttcgatgc cgttgcgttt
    16501 cacccatttc ataaggtgtt tgatgttttt gcccaagcgg ttggcaaacg gtgtgatgtc
    16561 ggtcattggt ttcaggcgga ataaagtgga aaacggcaat tttactgtaa ttaacgcccg
    16621 attgcttgac cgtttcgggc aaaccctata ccatccgtcg cttatcttgt catacgaagc
    16681 catcgccttc caacctaaac cgcccttacg ggcgcgtttc ttctgttgct ttgattttgc
    16741 aaagcatatc tgtgcaggtt gccgtcgatg taaaccacaa gcaagccgct tgcgacaacc
    16801 ctgtaacttc acattccccg tatcgttacc cttccctgct tcaggccgtc tgaacctttc
    16861 ggacgcgggc gttgttgtct tccaaggata gccatgtcta ttaaatttgc cgatttgaac
    16921 cttgataaaa acattttgtc cgccgtcagc agcgagggtt acgaaagccc gaccccgatt
    16981 caggcgcaag ccattccgtt tgctttggaa ggccgcgaca tcatggcttc ggcgcaaacc
    17041 ggctccggca aaaccgccgc ctttctgtta ccgactttgc aaaaactgac caaacgcagc
    17101 gaaaaaccgg gcaaaggccc gcgtgctttg gtgttgaccc cgacccgcga actggcggct
    17161 caagtcgaga aaaacgcgct ggcgtatgcc aaaaatatgc gttggttccg caccgtcagc
    17221 atcgtcggcg gcgcgtcttt cggctaccaa acccgtgccc tgagcaaacc ggtcgatctg
    17281 attgtcgcca cgccgggccg tctgatggac ctgatgcaaa gcggcaaagt tgattttgaa
    17341 cgtttggaag tgctgatttt ggacgaagcc gaccgtatgt tggatatggg ctttatcgac
    17401 gacatcgaaa ccatcgtgga agcaacgccg agcgaccgtc agactttgtt gttctccgcc
    17461 acttgggacg gcgcggtcgg caaactggcg cgcaaactga ccaaagaccc tgaaatcatc
    17521 gaagtcgaac gcgtggacga tcaaggcaaa atcgaagaac aactgctgta ctgcgacgat
    17581 atgcgccaca aaaaccgcct gctcgatcat atcttgcgcg atgccaatat cgatcaatgc
    17641 gtgattttca cgtccaccaa agccatgacc gaagtcattg cggatgaact gtacgaaaaa
    17701 ggtttcgccg caaactgcct gcacggcgat atgccgcaag gctggcgcaa ccgcacgctg
    17761 atggatttgc gtaaaggccg ctgcaaaatt ttggttgcca ccgatgttgc cgcacgcggt
    17821 atcgacgtac cgaccattac ccacgttatc aactacgacc tgccgaaaca ggcggaagac
    17881 tacgtccacc gcatcgggcg caccggccgc gcaggccgca cgggtattgc gattacgttt
    17941 gccgaagtga acgaatacgt caaagtccac aaaatcgaaa aatacattaa ccgaaaactg
    18001 cccgaactga ccatcgaagg catggaaccg acccgcaaac gcaaatccgc aggcggcaag
    18061 ccgaaaggca aaggcggctg gggcgatcgt aaatccggcg gttggcgcgg cgatcataaa
    18121 ccgagcaaag aaggcttcgg cggcaaaacg cgcggcgaag gtttcaagaa agaaggcttt
    18181 aagagagacg gtttcaaaaa aaccggcgaa ggcttcaaag gcaaacgcaa agccggcgat
    18241 tcttttgcag gcaaaggcga acgccgttac aaagaccgct aagccccaac ctgccgcata
    18301 aaccaatgcc gtctgaaacc gatttcgagt ttcagacggc atttttgcaa tgtttcagca
    18361 ccgcccggct ttgataccca aaggattaat ctgcaatata gtggattaac aaaaaccagt
    18421 acggcgttgc ctcgccttag ctcaaagaga acgattctct aaggtgctga agcaccaagt
    18481 gaatcggttc cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt
    18541 aatccactat aaaaaccctt ttccgctttg gcaacgattg aaaatttctg taaattcaaa
    18601 tatctaaatt ccttcctgcg tgggaatgac gcagaagggt ttcagatgca gggtgggcat
    18661 tcctgttcac caaaaaatcc cgcccttaca acggtgggca agaatgctca ccccacgacc
    18721 tgacggttcg atatgatgcc gtctgaaaac ccaacggcgg catgacaatg ccgccctgcc
    18781 aacgcacgta aatcagaatt gccatcccga catcaaactc ttggaaacaa aatgccgtct
    18841 gaaagccctt cagacggcat tggcgcgccg ggtttaccgc ctcctgccga aaccgcgcat
    18901 agccggtcgg cggtaattgg cgggcgggcg cgttgtcggg cggtaacgct gcgcctgcgc
    18961 cgcctgttgt tttgcgcgga ggctgcgcgt gttcaaatcc ctgctggtgc gcgcattggg
    19021 gcgtgcggac tgatggtagg ctgcacgcgc gcgccgggcg acgggactgt cttggttgcc
    19081 tgcccgtgtg aatttgtttg ccagcgcgtt gccgataaac gcgcctgccg ccgcgccgac
    19141 caggctttgc agcagccagc ttcctgtcga ttggtcgtaa atatactgct gcccgtcttt
    19201 accggtaacg ggttgcccgt tgttgccgtt tgcctgtgct tcggcaggaa tggtgtcttt
    19261 gactgcttcg ggagtcagtt ggtaaaccgt atcgtctgcc tgctgtgcga gctgctgttg
    19321 cagggcttca atctgtttct gctgctgttc gagccgcgcc tgcgtgtcgt cttggcaggc
    19381 ggcgagtgcg aatgttgcga taagcgcgga ggcgatgatt tttttcatgt gtgtcctgtt
    19441 tgggtggaaa atcggtttta ttgtatcgcc gtcgggaatt ttggcaagca ttctgccgac
    19501 aaatcgtgat gtttacaggg gcagggtgtg cagtttgcgg acaaatgcga ggctgttggc
    19561 gactgggttg cctttgtttt cgacttcgtg ttcggtttct acggtcagca ggcggcggtt
    19621 tttgtgtttg ttcaggctca attcggcttg tgcgggtgtg aaaaacaggc ggtgtttttc
    19681 ggcaaagcgg cgggcgcggc tgttggcggt tttcaaaatc tgaagcagcg atacgtccag
    19741 atggaagcgt cgcacgccca atacgagaat ccgtgcggca aaaaaatcgg cggcatcggt
    19801 aaactcggcg gggctgctgc ggctgaagtc gtgccgttcg gcggctatca gggcggcaac
    19861 ggtgcggatt tgcggaatca tcgattcgct gataagtgtg tcgtcccgcc ctgcatcgag
    19921 aagcatgggg gaaaaatcct gcgcatcatc gacaataatg ctacaagtgt gcagggtttc
    19981 gttttgtgcg gcggtttggg gcattgcatt catggtcatt ttcctgattc tgtcgtgtgt
    20041 tgccgaatcg ggcgacctgt gtgaaggtaa caaaaaagcc gccccatttt cgagcggcct
    20101 gttttgcgta tgggatggat ttcaagcaag cgcaaaaaag taccgcacgt ctgtgtggta
    20161 ccaatagcaa taagcggttg taaatttttt gccttgcatg atgaaatgcc gtctgaagat
    20221 aaaaatattg gggagattct aaatcaaaac gctgccgcgc ctcaagcatt ttatcgaaat
    20281 ttttttgatt tttcatctat ccgattgaaa atatttcggt ttatttttac cgctgcccga
    20341 tattgtcggc aatttccctt tatctgcttt gaaaaacggt gcataatccc gagcaaaacc
    20401 gcaatcagga gcaattatgc aaaactatct gacccccaat ttcgcctttg ccccgatgat
    20461 tcccgaacgc gcttcaggca gccgcgtttg ggatacggaa gggcgtgaat atattgattt
    20521 ttcaggcggt atcgccgtca atgcgctggg acactgccac cctgcccttg ccgatgcttt
    20581 aaacgcgcag atgcacaagc tgtggcacat ttccaatatc tatacgacgc gtccggcgca
    20641 ggaattggcg caaaaattgg ttgcaaacag ttttgccgac aaggtttttt tctgcaactc
    20701 gggcgcggaa gcgaatgagg cggcgttgaa gctggcaagg aaatatgcgc gcgaccgttt
    20761 cggcggagga aaaagcgaaa tcgtcgcctg tatcaacagt ttccacggac gcacgctgtt
    20821 taccgtgtcc gtcggcggtc agccgaaata cagcaaggat tatgcaccgc tgccgcaagg
    20881 cattacgcac gttccgttca acgatattgc cgcgctggaa gctgccgtcg gcgaacagac
    20941 ctgcgcggtc atcatcgagc cgatacaggg cgaaagcggc atcctgcccg ccactgcgga
    21001 atatttgcaa accgcgcgcc gtctgtgcga ccggcacaat gcgttgttga ttttggacga
    21061 agttcaaacc gggatggggc atacgggcag gctgtttgcc tatgaacatt acggcgttgt
    21121 tcccgatatt ttgagttcgg caaaagcctt gggctgcggc tttccgatcg gcgcgatgct
    21181 ggcgacagaa aagattgccg ccgccttcca accgggcacg cacggctcga ctttcggcgg
    21241 caacccgatg gcgtgtgcgg tcggcagccg cgcattcgac atcatcaata cgcccgaaac
    21301 tttaaaccat gtccgtgaac aggggcagaa acttcagacg gcattgctgg atttgtgcag
    21361 gaaaacgggc ttgttctcac aagttcgcgg gatggggctg ctactcggct gcgtgttgga
    21421 cgaagcctat cgcggacgcg catccgaaat caccgccgcc gccttgaaac acggcgtgat
    21481 gattttggtt gcgggtgcgg acgtattgcg tttcgcgcct tcgctactgt tgaacgatga
    21541 ggatatggcg gaaggtttgc gacgtttgga acacgcgctg acggaatttg ccgcgacatc
    21601 agacaatccg taaaactcaa atgccgtctg aaggcgggaa ggcttcagac ggcatcagaa
    21661 acaaaaaacc gcttcagaaa cgtggttcaa cgttccgaag cggttttgtt tgccatcagg
    21721 actcgaacac caattccggt tccctgccct cttcgatgac tgccttaccg accaccactt
    21781 ttttcaagcc tttcaaatca ggcaggcggt acatcgtatc gagcaggcag cgttcgacga
    21841 tggacctcag gccgcgcgcg ccggttttgc gttccattgc ctgacgcgcg atggaacgca
    21901 atgcgccttc ttcaaactcc agttcgacat tttccatacc gaacaacgcc tgatactgct
    21961 tgaccaaagc atttttcggc tcggtcaaaa tattaatcag cgcgtcttcg tccaattctt
    22021 ctaaagttgc aatcacaggc aaacgtccga ttaattctgg aatcagaccg aatttaatca
    22081 agtcttccgg ttcgacgatg ccgaacagct tggtaatgtc ggcattttcg tccttgctgt
    22141 gaacggacgc accgaaaccg ataccgcctt tttcagtacg ctggcggatg actttttcca
    22201 agcctgcaaa cgcgccgccg cagataaaca ggatgttggt ggtatcgacg ttgataaatt
    22261 cctgattcgg atgcttgcgg ccgccttggg gcggaacgct ggccactgta ccttcaatca
    22321 gtttcaacaa ggcttgttgc acaccttcgc cggatacgtc gcgggtaatc gacgggttgt
    22381 cgcttttgcg tgaaatttta tcgatttcgt cgatatagac aatgccgcgc tgggcttttt
    22441 cgacatcgaa atcacatttg cccaaaagct tggtaatgat ttgctcgacg tcttcgccga
    22501 cataacctgc ttcagtcaaa gttgtggcat ccgccatcac gaacggcaca tccagtttgc
    22561 gcgccaaaga ttgcgccagc agggttttac ccgatccggt cgggccgata agcaggatgt
    22621 tggatttcga caattcgaca ttagctcctg ctttaggatg gcgcaggcgt ttgtaatggt
    22681 tgtacaccga caccgccaag gctttcttgg cttgttcctg accgataacg tggtcgttga
    22741 ggttggcgac gatttcggcg ggcgtgggca gcttgccgga ttcttccggc tcccctccgg
    22801 cactttccga aggcgtgccg tcatttccgt cttcatgcaa tatttcaata cagtttgaga
    22861 cgcattcgtc acagataaag gcgttttcgc cctcaattaa atgtttgacg tgtgatttgg
    22921 attttccgca aaaggaacaa gtacggtttt cgttggacat ggctttcttt acaatgtatg
    22981 cgttacagaa aacggcacgt gccgttcggg ttgccaagta taataactat atccgttctt
    23041 atcaatgtat taccttaaaa tcccgccgat taggctataa tacgcccttt cgcaaccgcc
    23101 ccggcggcaa aaatgccgtc tgaaaccaaa tctgaaatct gaggatattc atgagaaaac
    23161 cccaacgcgg ctacgcccgc caagaccgtg tcaaagaaca aattatgcgc gagcttgccg
    23221 aactcgtccg taccggactg aaagacccgc gcgccggctt cattaccgtc aacgaagtcg
    23281 aagttacccg cgattacagc cacgccaccg tgttctacac cattttaaac caagacgcgc
    23341 gcgaaattac ggaagaagtg ctggaacacg cgcgcggaca cctccgcagc gaattggcca
    23401 aacgcatcaa gctgttcaaa acgcccgaac tgcatttcaa atacgacgaa tctttggaac
    23461 gcggtttgaa cctgtccgcc cttatcgatc aagtggcggc ggaaaaaccg gttgaagact
    23521 gacggatatg cccatgccgt ccgaacatcg aaccatgaat acaggcaaac cccaaaaacg
    23581 tgccgtcaac ggtgttttgc tcttggacaa acccgaaggc ctttccagca acaccgcgct
    23641 gcaaaaagcg cggcgtttgt ttcatgccga aaaagccgga cataccggcg tgctcgaccc
    23701 tttggcaacc ggacttttgc ccgtctgctt cggtgaagcg accaagttcg cccaatacct
    23761 gctggatgcc gacaaagcct acaccgccac gctgaaactc ggcgaagcca gcagcacggg
    23821 tgatgccgaa ggcgaaatca ttgccaccgc ccgcgccgat atttccttag ccgaatttca
    23881 gacggcctgc caagcactga caggcaacat ccgccaagtg ccgccaatgt tttccgcgct
    23941 caagcacgaa ggcaaaccgc tgtacgaata cgcccgcaaa ggcatcgtca tcgaacgcaa
    24001 agcgcgcgac attaccgttt acgccatcga tattgccgaa tttgacgcgc ccaaagccgt
    24061 catcgacgta cgttgcagca aaggcaccta catccgcacc ctcagcgaag acatcgccaa
    24121 acacatcggc acgttcgccc acctgaccgc cctgcgccgc actgaaaccg ccggctttac
    24181 catcgcccaa agccacacgc ttgaggcctt ggcaaatttg aacgaaacag aacgcgacag
    24241 cttgctgcta ccctgcgacg tattggtttc acactttccc caaaccgttt taaacgatta
    24301 tgccgtccat atgctccact gcggacaacg tccgcgtttc gaagaagacc tgccttccga
    24361 cacgccggta cgcgtttaca cggaaaacgg ccgctttgtc ggtctggcgg aatatcaaaa
    24421 agaaatatgc cgtctgaaag ccttgcgcct gatgaacacg gcggcatccg ccgcctgaac
    24481 ggcggttaaa aatacaggct gtgtttgaat aatgtgttga tatagtggat taaatttaaa
    24541 ccagtacagc gttgcctcgc cttgccgtac tatttgtact gtctgcggct tcgtcgcctt
    24601 gtcctgattt aaatttaatc cactatattt ccgcaaaatc acgacacact cggacacccg
    24661 ccccgcttat cgcaactttg cgaacgcccc ggaaacagca aatacagcaa ataattgatt
    24721 ttattagagt ttatttgcaa aaccatttgc cgttacacaa gaatggcaca ttaaaatgac
    24781 tgatgaggat ttataacgat gaagacagac attcaaaccg aattaaccca agccctacta
    24841 ccacacgaaa aagtatgggc gaacgaagaa aaaaccattt tagccaaaaa cattctgttg
    24901 gatttggtgg aaaaaaccga cccgaccatt atcggtttgt tattgaataa tgatgagtta
    24961 aaacgccatt tctttgtgga agtgaatggt gttttggtgt ttaaattgca ggatttacgt
    25021 tttttcttgg acaaacacag cgtcaataat tcctacacaa aatacgccaa ccgcattggt
    25081 ttgacggacg gcaaccgctt tttgaaagac aattcggata ttgtgttgga ttttccgttt
    25141 aaagattgcg tattgaatgg cggacaaagc accgaagaag gcgaagagat ttattttaaa
    25201 cgcagtaata gccagccagc cagccagcca gccagccagc cagccagcca gccagccagc
    25261 cagccagcca gccagccagc cagccagcca gccagccaat tatacactaa attaacccga
    25321 aaaagacaag aaatcttttt taatcaaacg cttgcttttg atgaaatcga tcggcttttt
    25381 gacgcaaaag cattctcaaa attctctcgc tataccgcag acggcaaaca agcggttggc
    25441 gaaatcaaac gtcattcaga cggcacaccc gccgaaaatc tcattatcaa aggcaataat
    25501 ctgatagccc tacattcgct tgccaaacag tttaaaggca aagtgaagtt gatttatatt
    25561 gatccgcctt attattttgt taaaaagaaa caacaagata gttttggtta taacactaac
    25621 tttaaattat ctacttggct tacatttatg aaaaatcgtt tatcaattgc caaagaatta
    25681 ttaactgatg atgggattat tgttatttcc attgatgatg acggaaatgc ttatttaaag
    25741 attttgttag atgaaatttt tggatttgaa aattttatcg gaaatttacc cactattatg
    25801 aatttaaaag gtaataatga tgaatatgct tttgcaggca ctcacgaata cacactagtc
    25861 tttgctaaaa ataaagataa atctactttt tatgaatttc caatagatga agataatttt
    25921 ttagagaaat gggaagaaga tgaaattggg ttttataaaa aaggagctcc aatgcgagca
    25981 acaggaaccg aagataaaag agaagataga cctgaaatgt tctatccttt tttggtaaaa
    26041 aataacacag ttagtacaat tacagatgaa gaattttctc aaatctataa taaagattta
    26101 gaagtattca atgatgattt tattcaaaaa ctaaaagaga aatacgaaaa tcttggatac
    26161 aattttattt tacctattgc tgataaacaa tgggggcgtt ggcgttgggg gtattcaata
    26221 aagaataagg caaggctgca gacggatatt attgttagcc aatctaaaaa tggaatttcc
    26281 ttgtataaaa aacaaagacc tgaattagat gatttaccta caaaaaaacc taaaactatt
    26341 ttttataaac ctgaatacag tagtggtaat ggaactgaac agatgaaaaa tctttttggt
    26401 gaaaaggcat ttaaaaatcc taaaccagaa gaacttatcc aagattttat taccatcaca
    26461 accaacgaat ccgacatcgt cttagactac catcttggta gtggcacaac cgccgccgtt
    26521 gcccacaaaa tgaaccgaca atatatcggt attgaacaaa tggattatat tgaaacgctt
    26581 gccgttgaac gcttgaaaaa agtgattgat ggcgagcaag gcggtatttc caaagccgtg
    26641 aattggcaag gtggtggcga gtttgtttat gccgaacttg ccccatttaa cgaaaccgca
    26701 aaacaacaaa ttttggcttg cgaagattca gacggcatca aaacgctgtt tgaaggttta
    26761 tgcgaacgct atttcttgaa atacaacgtc agcgtaaatg aatttagtca aatcattcaa
    26821 gagcctgaat ttcaatcttt gccattagac gaacaaaaac aaatggtgct tgaaatgtta
    26881 gatttaaatc aaatgtatgt ttcattatcc gaaatggacg acgagcaatt tgcagattgc
    26941 ctgaacgatg acgataaagc ggtaagccgt gcgttctatc aagcggagaa aaaaaatggc
    27001 gaataataaa actttgtttg aagtaattga aaaccgcaaa gctgtgtatt tggaagacgg
    27061 agatgatgaa aaatacaggc tgcctaaatt tgtttcaaat aatttgaaat atccgttttt
    27121 tgaatggcaa aaatcggctt tagaaaactt tgtgattttt gaccgcactt caaaattaaa
    27181 ggattttccc gatatcaaaa accgccctac tcatttgcta tttaatatgg caacaggtgc
    27241 aggcaaaacg atgatgatgg cggcattgat tttgtattat tttgaaaaag ggtatcggca
    27301 ttttctgttt tttgtgaatc aaaacaatat cgtggataaa acggaaaata attttattga
    27361 cccgacacac gcaaaatttt tatttaccga gaagattttg cagggcgata cggtaattcc
    27421 cattcgcaaa gtggaaacgt tcagcccaca ttcagacggc attgaaatta aatttaccag
    27481 cattcaaaag ctgtataacg atattcacac cgaacgggaa aaccaaacca cattggcgga
    27541 tttgcacgaa ttgaatcttg tgatgctggg cgatgaagca caccatttaa acgcgcaaac
    27601 caaaggcaaa aaacaaggcg agttggattt ggaagtggaa ttaaaagcca atgcaggcaa
    27661 tgccgaaatt gaacgcaaag gctgggagca tatggttttg gaattgttac tcaataaaaa
    27721 tggcaatccc agccaaaatg tgctgttgga atttaccgcc acgctgcctg aaaatgctga
    27781 cgtgcaacaa aaatacgcgg ataaaatcat cacaaaattt ggcttaaaag aatttttgca
    27841 aaaaggttat accaaagaaa tcaatttggt atccagtacg ctgggcaaga aagagcgggt
    27901 gttgcacgct ttattatttg cttggtatcg ccatcaaatc gctttgaaat atggcattgc
    27961 caatttcaag cctgtgatgt tgtttagaag taagacgatt gatgaatcaa aagcggatta
    28021 tctggcattt ttaaattggg cagaaaatgt gcaggcggtt gatttttcgt ttttaactac
    28081 attttcaaca agcttgaacg atagcgatag cgataacgcc aacgaacaag gcaaaacccg
    28141 cactgaacaa gccctaaaat ttatgcagga aaaaggcgtt gagtttgcac atttggcaga
    28201 ttgggtaaaa caaaattatc aaaaacacaa tgtgattatt accaactccg aaaccaacaa
    28261 aaccaaaacc gaaaaaaccg acagcgaaac agaaaaattg ctgaataatt tggaagcggc
    28321 tgataatccg attcgtgcca tttttacggt ggacagatta accgaaggtt gggacgttct
    28381 gaatttgttt gatattgtgc gtttgtatga agggcaaaac ggcggcggtt caaataaaaa
    28441 atcaggcaaa acggctgccg ccaccgtatc ggaaaagcag ttgattggtc gtggcgtgcg
    28501 ttattttcca tttgcgtttg aaggtaaaca gccgaataaa cgcaaatttg acaacgatat
    28561 gcaacacgaa ttgcgtatct tggaagaatt gttttattac gcgcacgatg agcaatcccg
    28621 ctatatttca gaactgaaaa atgagttgcg aaaagacggt tatttgcctg aaaaagacga
    28681 tgataaggta ttggcaacat ttaaactcaa atctgaattt gccgctaata aggattttag
    28741 agaattgtta atttgggcga ataaaaaaat ccccaaccca aacgccaaaa gcaataatgc
    28801 agacagccta aaagccaatc cacaaacgct ttcattccaa gttcacggta atcaactgtt
    28861 gcaggaaacg caatttacag ccgatgaaaa tgatgaaaca gcccgacaaa tcggcacaca
    28921 aaataatttt actcaaacca taaaaatgag tgaaatggag cggcacattt tcaataaagc
    28981 attacatatc aaagggaaaa atagtcaatc tttattccat ttcaaccgtt tgcaaagcaa
    29041 gctcgacatt caaaatcgca atgaattgca aaataacttg ttgaaagact ggcaaattga
    29101 atttttagga ttagggcaag acaaacaggt tcgcctggac gataaacttg caggctgcct
    29161 gaaaatcttg gaaatggttg aaaaacatct gaatgaaagt gatatgccgt ttatcggtac
    29221 aaaagaattt acacctaaaa aattatggga aattttcggc acgccaaaac aaaaatgggt
    29281 caaaaaagat gatgtaaaaa cgactattgc cacgcaaaat gattggtatg tgatgaataa
    29341 ttttgccgga acgggtttgg aagaagcgtt aattcaattt atttcagcgc gtttgggcga
    29401 tttgaaatct aaatatgacg ttcatttaat ccgtaatgaa gaagtgttta aattgaataa
    29461 ctttgccgat ggtgaaggat ttatgccgga ctttatttta ttgctgaaag ataaacaaaa
    29521 atcttcttcc aatggtgtga acgacttttt gcattaccaa attttcattg agcccaaagg
    29581 tgagcattta gtggaaactg atggatggaa agaagaattt ttagaagcca tcactgtgga
    29641 atatgggatg gataagatcc tgcaaaaaga tacaccgcat tatcgtttga tcggtttacc
    29701 gttttttact gatcatcaga aaaatggaca atttacggag tcattccctt taggtgcggc
    29761 atcgcttgaa aaaatgaagt agtgcattgc aggcaacccc gtttgacaaa acttccttta
    29821 caaaagggcg ttttgtcaga tatttaatca acacattatt aaaatacagc caaattttaa
    29881 tgccgtccga accctgtgtt cagacggcat cgtatttttc agtatctaaa ccgtttccct
    29941 gccccaatct ttgcctctca aaatcgaagc atcgacatct tgaatatcgc ggtgtcccgt
    30001 aaacgccata gatatatcca tttctttata caggatttcc agcgcacggg ttacgccttc
    30061 ttcaccatac gcacccaaac catacagaaa cgcccggcct atcatcgtac ctttcgcgcc
    30121 caaagcccac gccttcaaaa tatcctgacc gctgcggata ccgctgtcca tccaaacttc
    30181 gatgtcgctg cccactgcgc tgacgatgtc gggcaaggct ttgatggcag acacggtatc
    30241 gtcgagctgt cggccgccgt ggttggaaa
//
LOCUS       DBBZXW010000012        30069 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.012, whole genome shotgun sequence.
ACCESSION   DBBZXW010000012 DBBZXW010000000
VERSION     DBBZXW010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30069
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.012"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            25..1107
                     /gene="mraY"
                     /locus_tag="ACJJD2_000510"
     CDS             25..1107
                     /gene="mraY"
                     /locus_tag="ACJJD2_000510"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HGG7579108.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVAGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            1222..1494
                     /locus_tag="ACJJD2_000511"
     CDS             1222..1494
                     /locus_tag="ACJJD2_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG7579109.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            1584..2921
                     /gene="murD"
                     /locus_tag="ACJJD2_000512"
     CDS             1584..2921
                     /gene="murD"
                     /locus_tag="ACJJD2_000512"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HGG7579110.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            3058..4371
                     /locus_tag="ACJJD2_000513"
     CDS             3058..4371
                     /locus_tag="ACJJD2_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004465726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HGG7579111.1"
                     /translation="MTGGFLKISEVLVKVGDGVHTLLLDRQIVRDGRKFDAPLLWMVV
                     LMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRL
                     VPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRRE
                     EVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLI
                     MVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAF
                     LDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFG
                     FFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGA
                     LPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            4375..5442
                     /gene="murG"
                     /locus_tag="ACJJD2_000514"
     CDS             4375..5442
                     /gene="murG"
                     /locus_tag="ACJJD2_000514"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HGG7579112.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPAPAERFQGRKGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            5597..7006
                     /gene="murC"
                     /locus_tag="ACJJD2_000515"
     CDS             5597..7006
                     /gene="murC"
                     /locus_tag="ACJJD2_000515"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HGG7579113.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            7119..8033
                     /locus_tag="ACJJD2_000516"
     CDS             7119..8033
                     /locus_tag="ACJJD2_000516"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HGG7579114.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            8023..8751
                     /locus_tag="ACJJD2_000517"
     CDS             8023..8751
                     /locus_tag="ACJJD2_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HGG7579115.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            8837..10081
                     /gene="ftsA"
                     /locus_tag="ACJJD2_000518"
     CDS             8837..10081
                     /gene="ftsA"
                     /locus_tag="ACJJD2_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HGG7579116.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLQRWIENSF"
     gene            10200..11378
                     /gene="ftsZ"
                     /locus_tag="ACJJD2_000519"
     CDS             10200..11378
                     /gene="ftsZ"
                     /locus_tag="ACJJD2_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HGG7579117.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            11516..12826
                     /locus_tag="ACJJD2_000520"
     CDS             11516..12826
                     /locus_tag="ACJJD2_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HGG7579118.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFVMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            13451..14326
                     /gene="prpB"
                     /locus_tag="ACJJD2_000521"
     CDS             13451..14326
                     /gene="prpB"
                     /locus_tag="ACJJD2_000521"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HGG7579119.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            14411..15565
                     /gene="prpC"
                     /locus_tag="ACJJD2_000522"
     CDS             14411..15565
                     /gene="prpC"
                     /locus_tag="ACJJD2_000522"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HGG7579120.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEDR"
     gene            15977..16699
                     /locus_tag="ACJJD2_000523"
     CDS             15977..16699
                     /locus_tag="ACJJD2_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HGG7579121.1"
                     /translation="MDKDKGSYAGIPVQNTKELVWQKIQEIPISECGEPLVSVGNTGR
                     IRVNPVYFSQGIEGAINTVLLRRSVADRLTQVVSLLPEMYGLEIFDGWRPVIVQRALR
                     ENMKQEIEKRHPEYDEVQVREALDCFAADPDRAGMPLPHLTGGSVDVGLFDIKSGKSL
                     DMGSEFDATGHLSYSDALEKEGEYFSSARNLRRILIHAMKEAGFSNLPTEWWHFDYGN
                     QNWAYFTQQSNAVFGAVEEQDT"
     gene            16725..17930
                     /locus_tag="ACJJD2_000524"
     CDS             16725..17930
                     /locus_tag="ACJJD2_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HGG7579122.1"
                     /translation="MQTLISADNHLLLWAFVMLAAAAAIFIEQNSRLAGKVPGAVLAL
                     LIALIASNLGVIPTDAPVFDAVWSYIVPLAIPLLLFQLDLHALFKESGRMLFIFLISS
                     LGTVIGTLVSFALLKNYIPELDKVAGMISASYTGGGVNFAAMSAKLNPAKDVIAATIV
                     ADNLMMACYFFILIGISSSYWVRKVWGSPYQDKLEQEYHDPSVNKAAEYWKPKSISLQ
                     SIALSLAASILLVAVSFSLSSFLQNHFQSVDGVALKMLTGLISDKYLLLTTFTLAVVL
                     FFRKGIQKLDGSQELGTYCIYLFFVVIGVPASIPLIIKTAPLLFVFTLIIAVLNLLLT
                     LVLGKLFKFSIEEIVLACNANIGGPTTAAALAISKGWRDLVGAILLIGTVGYIIGNYI
                     GSFVYALLS"
     gene            18034..20640
                     /gene="acnD"
                     /locus_tag="ACJJD2_000525"
     CDS             18034..20640
                     /gene="acnD"
                     /locus_tag="ACJJD2_000525"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HGG7579123.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRQPGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAGKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGVVA"
     gene            20727..21173
                     /locus_tag="ACJJD2_000526"
     CDS             20727..21173
                     /locus_tag="ACJJD2_000526"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579124.1"
                     /translation="MKTQEDEVTKQKIFNHMINNKSFLNFQFWTFAALSAGSFAFLIS
                     AANIDSKDRDLTLEIAIVGYSVSLILNSILCFLIRGIEDDELSVKMLNEFNLDKRTFW
                     IPILATWSFALSTLFLLFTISLVGAITALIMAVLAIISFIKFTKKS"
     gene            21337..22506
                     /gene="prpF"
                     /locus_tag="ACJJD2_000527"
     CDS             21337..22506
                     /gene="prpF"
                     /locus_tag="ACJJD2_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HGG7579125.1"
                     /translation="MPQIKIPAVYYRGGTSKGIFFKRTDLPEAAQQAGEARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFSIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            22920..24119
                     /locus_tag="ACJJD2_000528"
     CDS             22920..24119
                     /locus_tag="ACJJD2_000528"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG7579126.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFSKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAVGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVGCGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            24227..24847
                     /locus_tag="ACJJD2_000529"
     CDS             24227..24847
                     /locus_tag="ACJJD2_000529"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HGG7579127.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(24974..25417)
                     /locus_tag="ACJJD2_000530"
     CDS             complement(24974..25417)
                     /locus_tag="ACJJD2_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HGG7579128.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            25591..25959
                     /locus_tag="ACJJD2_000531"
     CDS             25591..25959
                     /locus_tag="ACJJD2_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG7579129.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            26004..27158
                     /locus_tag="ACJJD2_000532"
     CDS             26004..27158
                     /locus_tag="ACJJD2_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HGG7579130.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(27215..28087)
                     /locus_tag="ACJJD2_000533"
     CDS             complement(27215..28087)
                     /locus_tag="ACJJD2_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HGG7579131.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATFPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVEELWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            28172..28984
                     /locus_tag="ACJJD2_000534"
     CDS             28172..28984
                     /locus_tag="ACJJD2_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HGG7579132.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGEVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKHWVLDAV"
     gene            complement(29992..>30069)
                     /locus_tag="ACJJD2_000535"
     CDS             complement(29992..>30069)
                     /locus_tag="ACJJD2_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7579133.1"
                     /translation="YHNWGRLENTRFKTHEVSLGMRYHF"
BASE COUNT         6997 a         7549 c         8267 g         7256 t
ORIGIN      
        1 gacaaaacaa aaaaaggaag ccccatgttt ttatggctcg cacatttcag caactggtta
       61 accggtctga atatttttca atacaccaca ttccgcgccg tcatggcggc gttgaccgcc
      121 ttggcgtttt ccctgatgtt cggcccgtgg acgatacgca ggctgaccgc gctcaaatgc
      181 gggcaggcag tgcgtaccga cggcccgcaa acccacctcg tcaaaaacgg cacgccgacg
      241 atgggcggtt cgctgattct gaccgccatt accgtgtcca ccctgttgtg gggcaactgg
      301 gcgaacccgt atatctggat tctcttgggc gtattgctcg ctaccggcgc actcggtttt
      361 tacgacgact ggcgcaaagt cgtctataaa gaccccaacg gcgtgtccgc caaattcaaa
      421 atggtgtggc agtcaagcgt tgccattatc gccggtttgg cattgtttta ccttgccgcc
      481 aattccgcca acaatatttt gattgtcccg ttcttcaaac aaatcgccct gccgctgggc
      541 gtggccggct ttttggtgtt gtcttacctg accatcgtcg gcacatccaa cgccgtcaat
      601 ctcaccgacg gcttggacgg ccttgccgcc ttccccgtcg tcctcgttgc cgccggactc
      661 gccattttcg cctacgtcag cggacactac caattttccc aatacctgca attaccttac
      721 gttgccggcg caaacgaagt ggtgattttc tgtaccgcca tgtgcggcgc gtgcctcggt
      781 ttcttgtggt ttaacgccta tcccgcgcaa gtctttatgg gcgatgtcgg tgcattggca
      841 ttgggtgccg cgctcggtac cgtcgccgtc atcgtccgcc aagagtttgt cctcgtcatt
      901 atgggcggat tatttgtcgt agaagccgta tccgttatgc ttcaggttgg ctggtataag
      961 aaaaccaaaa aacgcatctt cctgatggcg cccatccatc accactacga acaaaaaggc
     1021 tggaaagaaa cccaagtcgt cgtccgcttt tggattatta ccatcgtctt ggtgttgatc
     1081 ggtttgagta ccctcaaaat ccgctgaacc tatgccgtct gaacaccttt cagacggcat
     1141 ttgaacgcgc aataaacctg cggcgacaat ccgcccagcc ctatcgttaa cggcggctta
     1201 tactaaaaca gaagtaaaac catgaaacag acagtcaaat ggcttgccgc cgccctgatt
     1261 gccttgggct tgaaccaagc ggtgtgggcg gatgacgtat cggattttcg ggaaaacttg
     1321 caggcggcag cacagggaaa tgcagcagcc caatacaatt tgggcgcaat gtattacaaa
     1381 ggacgcggcg tgcgccaaga ccttgtgctc gctcaagaat ggtttggtaa ggcttgtcaa
     1441 aacggagacc aagacggctg cgacatttac caacgcctga aggcaggtta ttgaacagcc
     1501 cgcgatgccg tctgaaagcg gcttgggcag gggcggacat ccccccacct gcccaatatg
     1561 atttgtttta ggacaaaacc aaaatgacgc ttgaaaacaa aaaaatcctc gtcgccggac
     1621 tcggcggtac gggtatttcc atgattgcct atctgcgcaa aaacggcgcg gaggtggccg
     1681 cttatgatgc ggagttgaag cccgagcgcg tgtcgcaaat cggtaagatg tttgacgggc
     1741 tggtgtttta cacaggccgt ctgaaagatg cgctggacaa cggtttcgat attttggcac
     1801 tcagccccgg catcagcgag cgtcagccgg atattgaggc gttcaagcaa aacggcggac
     1861 gcgtgttggg cgacatcgaa ttgctggcgg acattgtgaa ccgccggggc gacaaggtaa
     1921 ttgcgattac cggcagcaac ggcaaaacca cggtaacgag cctggtcggc tatctctgta
     1981 tcaagtgcgg gctggatacc gttatcgcgg gcaatatcgg cacgccggtt ttggaggcgg
     2041 aatggcagcg cgaaggcaaa aaggcggacg tgtgggtgtt ggagctttcc agcttccaac
     2101 tggaaaacac cgaaagcctg cgcccgacgg cggcgacggt actgaatatt tccgaagacc
     2161 atctcgaccg ctacgacgac ttgctcgact acgcgcatac caaagccaag attttccgtg
     2221 gcgacggtgt gcaggttttg aatgcggacg atgcgttctg ccgtgccatg aaacgtgccg
     2281 ggcgcgaggt aaaatggttt tcgttggaac acgaagccga tttttggttg gaacgtgaga
     2341 caggccgcct gaaacaaggc aatgaagatt tgattgccac gcaagatatt ccgttgcaag
     2401 gcttgcacaa cgccaccaac gtgatggctg ccgttgcctt gtgcgaagct gtcggtttgc
     2461 cgcgcgaagc attgctcgaa cacgtcaaaa cctttcaagg cctgccgcac cgcgtggaaa
     2521 aaatcggcga gaaaaatggc gtggtgttta tcgatgacag caaaggcacg aacgtcggtg
     2581 cgaccgccgc cgcgattgcc ggtttgcaaa atccgctctt cgtgatttta ggcggcatgg
     2641 gcaaagggca ggacttcacg cctctgcgcg acgcgcttgc cggcaaggca aaaggcgtgt
     2701 tcctgatcgg cgttgatgcg ccgcaaatcc gccgcgattt ggacggctgc ggtctgaata
     2761 tgaccgactg cgccactttg gaagaagccg ttcagacggc atatgcccaa gccgaagcgt
     2821 gcgatatcgt gctgctcagc ccggcttgtg cgagttttga tatgtttaaa ggctacgcgc
     2881 accgttcgga agtgtttatc gaagcgttta aggctttgtg atgccgtctg aaatgcaaac
     2941 gccgtcattg ttgggcggca agtaaagatt tagaataccg atttgggatg tatcgtatgt
     3001 tcggacggca ttgtctgccg tctgaaattt ttgccctttg cggcaggtgc aaacagaatg
     3061 acaggtggtt ttttgaagat ttcggaagta ttggtaaaag tgggcgacgg tgtccacact
     3121 ctgctgctcg acaggcagat tgtgcgcgac ggcaggaaat tcgacgcgcc gcttttgtgg
     3181 atggtggtgc tgatgacggc gttcagcctg ctgatgattt attcggcttc tgtgtatttg
     3241 gcatcaaaag aaggcggcga tcagtttttc tatttgacca gacaggcggg gttcgtcgtt
     3301 gccggcttga tagcgagcgg ttttttatgg tttctttgca ggatgaggac atggcggcgg
     3361 cttgtgccgt ggatttttgc cttatccggc ctgttgctgg tagtcgtatt gattgccggg
     3421 cgcgaaatca atggcgcgac ccgttggata cctttgggtc cgttgaattt ccagccgacc
     3481 gagctgttca agctggcggt catcctttat ttggcaagcc tgttcacgcg ccgtgaagaa
     3541 gtgttgcgca gcatggaaag tttgggttgg cagtcgattt ggcgggggac ggccaatctg
     3601 atcatgtccg ccaccaatcc gcaggcacgt cgtgaaacat tagaaatgta cggccgtttc
     3661 cgggcgatca tcctgccgat tatgctggtg gcgttcggtt tggtgctgat aatggtacag
     3721 ccggatttcg gttcgtttgt cgtcattacc gtcattgccg ttggaatgct gtttttggca
     3781 ggattgccgt ggaaatattt tttcgtcctg gtaggcagcg tcttgggcgg gatggtgctg
     3841 atgattaccg ccgctcccta ccgtgtgcag cgggtagtgg catttttgga cccgtggaaa
     3901 gacccgcagg gtgccggcta ccagcttacc cactctctga tggcaatcgg gcgcggagag
     3961 tggttcggta tgggtttggg tgcgagtttg agcaaacgcg gctttctgcc ggaagcgcat
     4021 accgatttta tttttgccat catcgccgaa gaattcggtt tcttcggtat gtgcgtgctg
     4081 atattctgtt acggctggct ggtggtgcgg gcgttttcca tcggcaagca gtcgcgcgat
     4141 ttgggtttga ctttcaacgc ctatatcgct tcgggtatcg gcatttggat cggtatccaa
     4201 agtttcttca atatcggtgt gaacatcggt gctttgccga ccaaaggtct gacgctgccg
     4261 ttgatgtcct atggcggttc gtcagtcttt ttcatgctga tcagcatgat gctgctgttg
     4321 cgtatagatt atgaaaaccg ccggaaaatg cgcggttatc gggtggagta aatcatgggc
     4381 ggtaaaacct ttatgctgat ggcgggcgga acgggcggac atattttccc cgcgctggcg
     4441 gtggcggatt cattgcgcgc gcgcggccat catgtgattt ggctgggcag caaggattcg
     4501 atggaagagc gtatcgtgcc gcaatacggc atacgcttgg aaacgctggc gattaaaggc
     4561 gtgcgcggca acggcatcaa acgcaagctg atgctgccgt ttactttgta tcaaaccgtc
     4621 cgcgaagcgc agcggattat ccgcaaacac cgtgtcgagt gcgtcatcgg cttcggcggc
     4681 ttcgttacct tccccggcgg tttggcggcg aagctattag gcgtgccgat tgtgattcac
     4741 gagcaaaacg ccgtggcagg tttgtccaac cgccacctgt cgcgctgggc gaagcgggtg
     4801 ttgtacgctt ttccgaaagc gttcagccac gaaggcggct tggtcggcaa ccccgtccgc
     4861 gccgatatta gcaacctgcc cgcgcctgcc gaacgcttcc aagggcgtaa aggccgtctg
     4921 aaaattttgg tggtcggcgg cagtttgggc gcggacgttt tgaacaaaac cgtaccgcag
     4981 gcattggctt tgctgcccga caatgcgcgt ccgcagatgt accaccaatc gggacggggc
     5041 aagctgggca gcttgcaggc ggattacgac gcgctgggcg tgaaagccga atgcgtggaa
     5101 tttattaccg atatggtgtc cgcctaccgc gatgccgatt tggtgatttg ccgtgccggc
     5161 gcgctgacga ttgccgagtt gacggcggcg ggattgggtg cgttgttagt gccgtatcct
     5221 cacgccgttg atgaccatca aaccgccaac gcgcgtttta tggtgcaggc agaagcagga
     5281 ctgctgttgc cgcaaaccca gttgacggcg gaaaaactcg ccgaaatcct cggcagcctg
     5341 aaccgcgaaa aatgtctcaa atgggcggaa aacgcccgta ctttggcatt gccgcacagc
     5401 gcggacgacg ttgccgaagc cgcgattgcg tgtgcggcgt aaactgccga accatgccgt
     5461 ctgaaatgcc gtccagacag catggatgtt ttttatttca atccgctata tatttgtcag
     5521 aaaactatgg cgcgcaaacg gtcagccctt taaaataacg cctttacgca tcgaaaatcc
     5581 accggaacgc aacattatga tgaaaaatcg agtgaccaac atccattttg tcggtatcgg
     5641 cggcgtcggc atgagcggca tcgccgaagt cttgcacaat ttgggtttta aagtttccgg
     5701 ttcggatcag gcgcgtaatg ccgctaccga gcatttgggc agcctgggca ttcaagttta
     5761 tcccggccat accgcagaac acgttaacgg tgcggatgtc gtcgttacct ctaccgccgt
     5821 caaaaaagaa aatcccgaag ttgtcgctgc gttggagcag caaattcccg ttattccgcg
     5881 cgccctgatg ttggcggagt tgatgcgctt ccgtgacggc atcgccattg ccggcacgca
     5941 cggcaaaacc acgaccacca gcctgaccgc ctccatcctc ggcgcggcag gacttgaccc
     6001 gactttcgtt atcggcggca aactcaacgc cgcaggcacc aacgcccgct tgggcaaagg
     6061 cgaatacatc gttgccgaag ccgacgagtc ggatgcatcc tttctgcacc tgacaccgat
     6121 tatgtccgtc gttaccaata tcgacgaaga ccatatggat acctacgggc acagcgtcga
     6181 aaaactgcat caggcgttta tcgatttcat ccaccgtatg cccttctacg gcaaagcctt
     6241 tttgtgtatt gacagcgaac acgtccgcgc gattttgccc aaagtgagca aaccttatgc
     6301 tacttacggt ttggacgata ccgccgacat ctacgccacc gacatcgaaa acgtcggcgc
     6361 gcaaatgaaa ttcaccgtcc atgttcaaat gaaaggacat gagcaggggt cgtttgaagt
     6421 cgtgctgaat atgcccggca gacacaacgt gctgaacgca ttggcagcca tcggcgtggc
     6481 gctggaagtc ggcgcatcgg ttgaagcgat ccaaaaaggc ttgctcggct ttgaaggtgt
     6541 cggccgccgc ttccaaaaat acggcgacat caagttgcca aacggcggga ccgcgctctt
     6601 ggtggacgac tacggacacc accccgtcga aatggcggcg acccttgccg ccgcacgcgg
     6661 cgcgtatccg gaaaaacgtt tggtactcgc cttccagccg caccgctata cccgcacgcg
     6721 cgatttgttt gaagacttta ccaaagtcct caataccgtt gacgcgctgg tgctgaccga
     6781 agtttatgcc gccggtgaag agccgattgc cgccgccgat tcccgcgctc ttgcccgcgc
     6841 catccgcgtg ttgggcaaac tcgagccgat ttactgcgaa aacgttgccg atctgcccga
     6901 aatgctgttg aacgttttgc aggacggcga catcgtgttg aatatgggtg cgggaagcat
     6961 caaccgcgtc cccgccgcgc tgctggaatt gtcgaaacag atttgaggca cacccgcctg
     7021 acagacggaa catcatataa aggtcgtctg aaaccgcaaa tcaggtttca gacgacctct
     7081 ggcaacaagc ataaagcaat caggaaagaa caaaaacaat gcagaatttt ggcaaagtgg
     7141 ccgtattgat gggcggtttt tccagcgaac gagaaatctc gctggacagc ggcaccgcca
     7201 ttttgaatgc tttaaaaagc aaaggcatag acgcatatgc cttcgatcct aaagaaaccc
     7261 cattgtctga attgaaggca caaggttttc agacggcatt caacatcctt cacggtactt
     7321 acggcgaaga cggggcggtt cagggtgcat tggaactgtt gggcattccc tataccggca
     7381 gcggtgtcgc cgcatccgcc atcggcatgg acaaataccg ctgcaaactg atttggcagg
     7441 cattgggact gcccgttccc gagttcgccg tcctgcacga cgacactgat ttcgatgccg
     7501 tcgaagaaaa attgggcctg ccgatgtttg tgaaaccggc ggccgaaggc agcagcgtag
     7561 gcgtggtaaa agtcaaagga aaaggccgtc tgaaaagcgt ttacgaagaa ttgaaacacc
     7621 ttcagggcga aatcattgcc gaacgtttta tcggcggcgg cgaatattcc tgccccgtcc
     7681 tgaacggcaa agggctgccc ggcatacaca tcattcccgc aaccgagttt tacgactacg
     7741 aagccaagta caaccgcgac gacaccattt atcaatgtcc ttcggaagat ttgaccgaag
     7801 ccgaagaaag cctgatgcgc gaactggcgg ttcgcggcgc gcaggcaatc ggtgcggaag
     7861 gctgcgtgcg cgtcgatttc ctcaaagata ccgacggcaa actctatctg ttggaaatca
     7921 acaccctgcc cggtatgacg agccatagtt tagtaccgaa atccgctgcc gttacgggcg
     7981 tgggttttgc cgatttatgt attgaaattt tgaagaccgc acatgtggga taatgccgaa
     8041 gcgatggaac ggctgacgcg ctggctgctt gtcatgatgg cgatgctgct tgctgcgtcc
     8101 gggctggttt ggttttacaa ttcgaatcat ctgcccgtca agcaggtgtc gctgaagggc
     8161 aacctggttt attccgataa gaaggcattg ggcagtttgg cgaaagaata catccatggg
     8221 aatattttga ggacggacat caatggcgca caggaggcct accgccggta tccgtggatt
     8281 gcgtcggtca tggtgcgccg ccgttttccc gacacggttg aggtcgtcct gaccgagcgc
     8341 aagccggtcg cgcgttgggg cgaccatgcc ttggtggacg gcgaaggcaa tgtttttgaa
     8401 gcccgcttgg acagacccgg aatgccggta ttcagaggcg cggaaggaac gtctgccgaa
     8461 atgctccgcc gttatgacga attttcgact gttttggcaa aacagggttt gggcatcaaa
     8521 gagatgacct atacggcacg ttcggcgtgg attgtcgttt tggacaacgg catcaccgtc
     8581 aggctcggac gggaaaacga gatgaaacgc ctccggcttt ttaccgaagc gtggcagcat
     8641 ctgttgcgta aaaataaaaa tcggttatcc tatgtggata tgaggtataa ggacggattt
     8701 tcagtccgct atgcttccga cggtttaccc gaaaaagaat ccgaagaata gtgggaacag
     8761 gtatcggaca gattacggcc gtgccgtctg aaacggtgcg acgcaaattt caatcagttt
     8821 taagagcaga cgaacaatgg aacagcagca aagatacatc agcgtactgg atatcggtac
     8881 gtctaaagtc ctcgcactga tcggggaagt tcaagatgac gacaaaatca acatcgtcgg
     8941 tttggggcag gctccttcac ggggcttgcg cgcgggcatg gtaaccaata tcgatgccac
     9001 cgtccaagcc atcaggcagg cggtcaatga tgccgagctg atggcggata ccaaaattac
     9061 ccacgttacc acaggtatcg caggcaacca catccgcagt ctcaattcgc aaggtgtggt
     9121 taaaattaaa gacggggaag tcacgcaggc agacatcgac cgcgccattg aaacggcaaa
     9181 ggcaatcaat atcccgcccg atcaaaaaat tctcgatgcc gtggttcaag actacattat
     9241 cgacacccaa cttggcgtga gggagcccat cggtatgagc ggtgtgcgtc tggatacgcg
     9301 ggtgcacatc attaccggtg caagtacggc agtgcagaat gtccaaaaat gtatcgagcg
     9361 gtgcggtttg aaaagcgatc agattatgct tcagccgttg gcaagcgggc aggcggtgct
     9421 gactgaagat gaaaaagacc tcggtgtatg cgtcatcgac attggtggcg gaacgaccga
     9481 tattgccgtt tatatgaacg gcgccatccg ccatacgtcc gtcattccgg ccggtggtaa
     9541 tctgattacc aaagatttgt ccaaatcgtt gagaacacct ctcgatgccg ccgagtacat
     9601 taaaatccat tatggcgtgg catcatgcga tacggaaggc ttgggtgaga tgattgaagt
     9661 tccgggcgtg ggtgaccgga catcgcgtca ggtttccagt aaggttttgg cagcaatcat
     9721 cagtgcacgt attcaggaga tttttggcgt agtgctgggc gagctgcaaa aatcgggttt
     9781 ccccaaagaa gtgctgaatg cgggtatcgt tctgaccggc ggtgtgtcca tgatgaccgg
     9841 gattgtggaa tttgccgaaa aaatcttcga tttgcctgta cgcaccggtg caccccaaga
     9901 aatgggcggt ttgtccgacc gcgtccgcac accgcgtttt tctaccgcta tcgggctgct
     9961 tcatgcagca tgcaagctgg aaggaaactt gccgcagccg gaaaacggtg cagtgcaaga
    10021 gagggaaggg ggcggcggtt tgttggcaag attgcaacgg tggattgaaa acagcttctg
    10081 aacaggtgga ttgccgtttg acaggtgaga agtattttgc cagcagcaag atacttctta
    10141 tataatgaat aataatttat ttaaaccgtc ctctgaatgg ggcgagcagg agtttttgaa
    10201 tggaatttgt ttacgacgtg gcagaatcgg cagtcagccc tgcggtgatt aaagtaatcg
    10261 gcttgggcgg cggcggttgc aatgcaatca ataacatggt tgccaacaat gtgcgcggtg
    10321 tggagtttat cagtgccaat acggatgcgc agtctctggc aaaaaaccat gcggcgaaga
    10381 gaatccagtt gggtacgaat ctgacacgcg gtttgggcgc gggcgcgaat cccgatatcg
    10441 gccgtgcggc agcccaggaa gaccgggaag ccattgaaga agccattcgc ggtgcgaata
    10501 tgctgtttat cacgaccggt atgggcggcg gtaccggtac cggttccgcg ccggttgttg
    10561 ctgagattgc caagtctttg ggcattctga ccgttgccgt ggttacccga ccgttcgcat
    10621 atgaaggtaa gcgcgtccat gtcgcacagg cagggttgga acagttgaaa gaacacgtcg
    10681 attcgctgat catcatcccg aacgacaaac tgatgactgc attgggtgaa gacgtaacga
    10741 tgcgcgaagc cttccgtgcc gccgacaatg tattgcgcga tgcggtcgca ggcatttccg
    10801 aagtggtaac ttgcccgagc gaaatcatca acctcgactt tgccgacgtg aaaaccgtga
    10861 tgagcaaccg cggtatcgct atgatgggtt cgggttatgc ccaaggtatc gaccgtgcgc
    10921 gtatggcgac cgaccaggcc atttccagtc cgctgctgga cgatgtaacc ttggacggag
    10981 cgcgcggtgt gctggtcaat attacgactg ctccgggttg cttgaaaatg tccgagttgt
    11041 ccgaagtcat gaaaatcgtc aaccaaagcg cgcatcccga tttggaatgc aaattcggtg
    11101 cggctgaaga cgagaccatg agcgaagatg ccatccggat taccattatc gctaccggtc
    11161 tgaaagaaaa aggcgcggtc gattttgttc cggcaaggga ggtagaagcg gttgccccgt
    11221 ccaaacagga gcaaagccac aatgtcgaag gtatgatccg caccaatcgc ggtatccgca
    11281 cgatgaacct taccgctgcg gatttcgaca atcagtccgt acttgacgac tttgaaatcc
    11341 ctgctatttt gcgtcgtcaa cacaattcag acaaataatg tgctgtttgc ccgtaaacct
    11401 gctgcctccc gaatcggttt gtccggtttg ggaggtatgt ttttcaagat gttgcaattt
    11461 cgtacggttt gcggtcggcg gattcagatt tttccacttg atacagactt cagatatgga
    11521 cacttcaaaa caaacactgt tggacgggat ttttaagctg aaggcaaacg gtacgacggt
    11581 gcgtaccgag ttgatggcgg gtttgacaac ttttttgacg atgtgctaca tcgttatcgt
    11641 caaccctctg attttgggcg agaccggcat ggatatgggg gcggtattcg tcgctacctg
    11701 tatcgcgtct gccatcggct gttttgttat gggttttgtc ggcaactatc cgattgcact
    11761 cgcaccgggg atggggctga atgcctattt cacctttgcc gtcgttaagg gtatgggcgt
    11821 gccttggcag gttgcgttgg gtgcggtgtt catctccggt ctgattttta tcctgttcag
    11881 cttttttaaa gtcagggaaa tgctggtcaa cgcactgcct atgggtttga aaatgtcgat
    11941 tgctgccggt atcggtttgt ttttggcact gatttccctg aaaggcgcag gcattatcgt
    12001 tgccaatccg gcaaccttgg tcggcttggg cgatattcat cagcccagcg cactgttggc
    12061 attgttcggt tttgtcatgg tggtcgtatt ggggcatttc cgcgttcaag gcgcaatcat
    12121 catcaccatt ctgacgatta ccgtcattgc cagcctgatg ggtttgaatg aatttcacgg
    12181 catcatcggc gaagtaccga gcattgcgcc gacttttatg cagatggatt ttgaaggcct
    12241 gtttaccgtc agcatggtca gtgtgatttt cgtcttcttc ttggtcgatc tatttgacag
    12301 taccggaacg ctggtcggca tatcccaccg tgccgggctg ctggtggacg gtaagctgcc
    12361 ccgcctgaaa cgcgcactgc ttgcagactc taccgccatt gtggcaggtg cggctttggg
    12421 tacttcttcc accacgcctt atgtggaaag cgcggcgggc gtatcggcag gcggacggac
    12481 cggcctgacg gcggttaccg tcggcgtatt gatgctcgcc tgcctgatgt tttcaccttt
    12541 ggcgaaaagt gttcccgctt ttgccaccgc gcccgccctg ctttatgtcg gcacgcagat
    12601 gctccgcagt gcgagggata ttgattggga cgatatgacg gaagccgcac ccgcattcct
    12661 gaccattgtc ttcatgccgt ttacctattc gattgcagac ggcatcgcct tcggcttcat
    12721 cagctatgcc gtggttaaac ttttatgccg ccgcaccaaa gacgttccgc ctatggtatg
    12781 gattgttgcc gtattgtggg cactgaaatt ctggtatttg ggctgattga ttcgatatta
    12841 aaaatgccgt ctgaaaggtt ttcagacggc attttgtttg ccgatatatt taatttttat
    12901 taaattatat aaaaatcaaa tagataataa actacatcag attacttaaa aataatacat
    12961 tgtttttatg tataaaatat tttataaggt ttcaggattt tgattatcga aaatttttct
    13021 tgatttcctg acaattttat tgaaacaaat aattcaaaat taatctagtt taatcatgga
    13081 attaaaataa aatattaaaa ttatgtaatg agtctcctta aaaatgtttg acattttcag
    13141 tcttgtgttt tagattagcg aaaaataaaa ctacacaata ctacaaagga acattactat
    13201 gaaaccaatt cagatgtttt ccccttttct gaataatccc cttgttttct tcttgtctgc
    13261 ggttttgccg cataattccg aacggtctgc tgtttttctt tgattcgttt taaatatcaa
    13321 taagataatt gttctcatat atttttaatg attggattgg gatgcccgac gcgtcggatg
    13381 gctgtgtttt gccgtccgaa tgtgatggaa gcctgtccat actgaaaaaa gtctataaag
    13441 gagaaatatg atgagtcaac actctgccgg agcacgtttc cgccaagccg tgaaagaatc
    13501 gaatccgctt gccgtcgccg gttgcgtcaa tgcttatttt gcacgattgg ccacccaaag
    13561 cggtttcaaa gccatctatc tgtccggcgg cggcgtggca gcctgttctt gcggtatccc
    13621 tgatttgggc attaccacaa tggaagatgt gctgatcgac gcacgacgca ttacggacaa
    13681 cgtggatacg cctctgctgg tggacatcga tgtgggttgg ggcggtgcat tcaatattgc
    13741 ccgtaccatt cgcaactttg aacgcgccgg tgttgcagcg gttcacatcg aagatcaggt
    13801 agcgcaaaaa cgctgcggcc accgtccgaa caaagccatt gtatctaaag atgaaatggt
    13861 cgaccgtatc aaagctgccg tagatgcgcg cgttgatgag aacttcgtga ttatggcgcg
    13921 taccgatgcg ctggcggtag aaggtttgga tgccgctatc gaacgcgccc aagcttgtgt
    13981 cgaagccggt gcggacatga ttttccctga agccatgacc gatttgaaca tgtaccgcca
    14041 atttgcagat gcggtgaaag tgcccgtgtt ggcgaacatt accgagtttg gttccactcc
    14101 gctttatacc caaagcgagc tggctgaaaa cggcgtgtcg ctggtgctgt atccgctgtc
    14161 atcgttccgt gcagcaagca aagccgctct gaatgtttac gaagcgatta tgcgcgatgg
    14221 cactcaggcg gcggtggtgg acagtatgca aacccgtgcc gagctgtacg agcatctgaa
    14281 ctatcatgcc ttcgagcaaa aactggataa attgtttcaa aaatgattta ccgctttcag
    14341 acggccttcc aatctatccg catcggccgt ctgaaaattg aaaatccata aaaaacaaag
    14401 gagaaatacg atgactgaaa ctactcaaac cccgactttc aaacctaaaa aatccgttgc
    14461 gctttccggc gttgcggcgg gtaatacagc attgtgtacc gtcggccgta ccggcaacga
    14521 tttgagctat cgcggttacg acatcttgga tttggcacaa aaatgcgagt ttgaagaagt
    14581 cgcccacctg ctgattcacg gtcatttgcc caacaaattc gagctggccg cttataaagc
    14641 caagctcaaa tccatgcgcg gcctgcctat ccgtgtgatt aaagttttgg aaagcctacc
    14701 tgcacatacc catccgatgg atgtgatgcg taccggcgta tccatgctgg gctgcgttca
    14761 tcctgaacgt gaaagccatc cggaaagcga agcgcgcgac atcgccgaca aactgatcgc
    14821 cagcctcggc agcatcctct tgtactggta tcaatattcg cacaacggca aacgcattga
    14881 ggttgaaagc gacgaagaga ccatcggcgg tcatttcctg caactgttgc acggcaaacg
    14941 cccaagcgaa tcccacatca aagccatgca cgtttcactg attctgtatg ccgaacacga
    15001 gttcaacgct tctaccttca ccgcccgcgt gattgccggt acaggctctg atatgtactc
    15061 cagcattacc ggagcaatcg gcgcgttgaa aggtccgaaa cacggcggcg cgaacgaagt
    15121 ggcttacgat attcaaaaac gctaccgcaa tgccgacgaa gccgaagccg acatccgcga
    15181 acgcatcggc cgcaaagaaa tcgtgatcgg tttcggtcat ccggtgtaca ccatctccga
    15241 ccctcgcaac gttgtcatta aagaagtggc acgcggtttg agcaaagaaa ccggcgatat
    15301 gcgcctcttt gacattgccg aacgtttgga aagcgtgatg tgggaagaga aaaaaatgtt
    15361 cccgaatctg gactggttct ccgccgtttc ctatcaaaaa ttgggcgtac cgaccgctat
    15421 gttcacaccg ctgttcgtga tttctcgtac aaccggttgg agcgcacacg ttctcgagca
    15481 acgcaaagac ggcaaaatca tccgtccgag cgcgaactac acgggccctg aagatttggc
    15541 gtttgtggag attgaagacc gctaatacgc gtaacagcag ggtgggccgc cagcccgccc
    15601 catctcgaaa tgccgtttga aaacaatgaa taaatgatgt tttcgttttt cgatggccta
    15661 gtgcagtatg cgagagagag ccggccgttt ggaaaacatg ctgctctgct gtcgtcattc
    15721 ccatacaggc agaaattcaa aagttgaaat gttctgctgt aaagagtgct gaaagattta
    15781 agtttggatt tccgtctata cgggaatgat ggtagcggag cagcaatttt tttcataccg
    15841 cgaatagatt tcagataaca agcaataaaa cagaatttat ggtttcagac ggcctgaagg
    15901 tccgaatcaa caggccgtct gaaaaaagaa atttaatgaa tttattggca tactaattat
    15961 taatgcggaa catttgatgg ataaggacaa ggggtcttat gctggtattc ccgtacaaaa
    16021 taccaaagag ttagtttggc agaaaataca agaaatacct atttctgaat gtggggaacc
    16081 gttggtcagt gttggtaata ccggacgcat tcgtgtcaat cctgtttatt tttcccaggg
    16141 tattgaaggt gcaataaata ctgttttatt gcgtagaagt gttgctgata ggctgactca
    16201 ggttgtctct ttgctgccag aaatgtacgg attggaaatt tttgatggtt ggcgtcctgt
    16261 catagtgcaa agagcattac gagaaaatat gaagcaagaa attgaaaaac gccatccgga
    16321 atatgatgaa gttcaagtta gagaagcact ggactgtttt gctgctgatc cagatcgggc
    16381 aggaatgcct ctgccccatt tgacaggcgg atctgttgat gtcggattgt ttgatataaa
    16441 aagtggcaaa agtttggata tgggaagtga gtttgatgca accggacatt tatcttatag
    16501 cgatgcttta gagaaagaag gtgagtattt ctcctctgct cgtaatttac gccggatttt
    16561 gattcatgcg atgaaagagg caggatttag taatttgcca accgaatggt ggcatttcga
    16621 ttatggcaac caaaattggg cttattttac ccaacaaagc aacgcagttt ttggggcggt
    16681 agaagagcag gatacttaaa ttaaaataaa aattgggagg aaaaatgcaa actttaattt
    16741 cagcagataa tcatttgctg ctgtgggctt ttgttatgtt agctgccgct gctgcgattt
    16801 ttattgagca aaacagtcgc ttggctggga aagtccctgg tgcagtatta gctttattga
    16861 ttgcgttgat tgcttctaat ttgggtgtta ttccgacgga tgctccagta tttgatgctg
    16921 tatggtctta tattgtacct cttgctattc cgttgttatt gtttcaatta gatcttcatg
    16981 ctctatttaa ggaaagtgga cgtatgctgt ttattttcct gattagttca ctagggacgg
    17041 tcattggaac gcttgtctca tttgcactat tgaaaaacta tattcctgaa ctagataagg
    17101 tagctggcat gatttcagca tcttatacgg gaggtggtgt taattttgca gctatgtcag
    17161 ctaagcttaa ccctgctaaa gatgttattg cagcaacaat tgttgctgat aatttgatga
    17221 tggcttgtta cttttttatt ttgattggta tctcttcctc atattgggtc agaaaagttt
    17281 ggggaagtcc atatcaggat aaattggagc aggaatatca tgatccgagt gtgaataagg
    17341 ctgccgagta ttggaaacct aaatccattt cgctacagag tatagcctta tctttggctg
    17401 cctcgatttt gttggtcgca gtttcattct cattatccag ttttttgcaa aatcattttc
    17461 aaagtgttga tggtgttgca ttaaaaatgc tgacaggttt aattagtgac aaatatttgc
    17521 tgttaacgac atttacattg gcagttgttt tatttttccg taaaggcatt caaaaactag
    17581 atggcagtca agaattaggg acatattgta tttatctgtt ttttgttgtg attggtgttc
    17641 ctgcctctat accgttaatt attaaaacag caccattact ctttgttttt actttgatta
    17701 ttgcggtatt gaatttgtta ctgacgttag tgttaggcaa gctgttcaaa ttcagtattg
    17761 aagaaattgt attggcttgt aatgccaata ttggagggcc gactactgca gcagccttag
    17821 ccatcagtaa aggttggcgt gatttagtcg gtgcaatttt gttaattggt actgtaggct
    17881 acattatcgg taactatata ggttcgtttg tatatgccct attgagctga agactaatct
    17941 aacaatccat gaaccttttc agacgacccc cttcaaaaaa cgtcgtctga aaccccaaac
    18001 cacaagaaaa atagatccac aggagaactg aacatggctg ccaaccaacg ttaccgcaaa
    18061 ccgctacccg gtacggattt ggaatactac gacgcgcgtg cggcgtgtga ggacatcaaa
    18121 cccggctctt acgacaagct gccttataca agccgtatct tggctgagaa cttggtcaac
    18181 cgcgcagaca aagtcgacct gccgacgctg caaagctggc tgggccagtt gatagaaggg
    18241 aagcaggaaa tcgactttcc gtggtatccc gcgcgggtgg tgtgccacga tattctgggg
    18301 cagaccgcgc tggtggattt ggcgggcttg cgcgatgcga ttgccgaaaa aggcggcgat
    18361 cctgccaaag tgaatccggt ggtgcaaacc cagcttatcg tcgaccactc tctggcggtg
    18421 gagtgcggcg gttacgatcc tgatgccttc cgcaaaaacc gcgaaatcga agaccggcgc
    18481 aacgaagacc gtttccactt catcaactgg acaaaaaccg catttgaaaa tgtggacgtg
    18541 attccggcgg gcaacggcat tatgcaccaa atcaatctgg aaaaaatgtc gcccgtcgtc
    18601 caagtcaaaa acggcgtggc tttccccgat acctgcgtcg gcacggattc gcacacgcca
    18661 cacgtcgatg cgctgggcgt gatttccgta ggcgtgggcg gtttggaagc cgaaaccgta
    18721 atgttaggcc gtgcatccat gatgcgtctg cctgatattg tcggcgttga gttgactggc
    18781 aaacgtcaac ctggcattac tgccaccgac atcgtgttgg cactgaccga attcttgcgt
    18841 aaagagcgcg tggttggcgc atttgtcgaa ttcttcggcg agggcgcaag aagcctgtct
    18901 atcggcgacc gagccactat ttccaacatg acccctgagt tcggcgcgac tgccgcgatg
    18961 ttcgctattg atgagcaaac cattgattat ttgaaactga caggccgcga cgacgcgcaa
    19021 gtgaaattgg tggaaaccta cgccaaaacc gcaggcttgt gggcagatgc cttgaaaacc
    19081 gccgtttatc ctcgcgtatt gaaatttgat ttaagcagcg taacgcgcaa catggcaggc
    19141 ccaagtaacc cgcatgcccg ttttgcgact gccgatttgg ccggcaaagg cttggctaaa
    19201 ccttatgaag agccttcaga cggccaaatg cctgacggtg cagtgattat tgccgcgatt
    19261 acttcctgta ccaatacttc caatccgcgc aacgttgtcg ccgccgcgct gttggcacgc
    19321 aatgccaacc gcctcggctt gcaacgtaaa ccttgggtga aatcttcgtt tgccccgggt
    19381 tcaaaagtag ccgaaatcta tttgaaagaa gcaggcctac tgcctgaaat ggaaaaactc
    19441 ggcttcggta tcgttgcctt cgcatgtacc acctgtaacg gcatgagcgg tgcgctggat
    19501 ccgaaaatcc aaaaagaaat catcgaccgc gatttgtacg ccaccgccgt attatcaggc
    19561 aaccgcaact tcgacggccg tatccacccg tatgcgaaac aggctttcct cgcttcgcct
    19621 ccgttggtcg ttgcctacgc gctggcaggc agtatccgtt tcgatattga aaacgacgta
    19681 ctcggcgttg cagacggcaa ggaaatccgc ctgaaagaca tttggcctgc cgatgaagaa
    19741 atcgatgccg tcgttgccga atatgtgaaa ccgcagcagt tccgcgatgt gtatgtaccg
    19801 atgttcgaca ccggcacagc gcaaaaagca cccagtccgc tgtacgattg gcgtccgatg
    19861 tccacctaca tccgccgtcc gccttactgg gaaggcgcgc tggcagggga acgcacatta
    19921 agaggtatgc gtccgctggc gattttgccc gacaacatca ccaccgacca cctctcgccg
    19981 tccaatgcga ttttggccgt cagtgccgca ggcgagtatt tggcgaaaat gggtttgcct
    20041 gaagaagact tcaactctta cgcaacccac cgcggcgacc acttgaccgc ccaacgcgct
    20101 accttcgcca atccgaaact gtttaacgaa atggtgaaaa acgaagacgg cagcgtgcgc
    20161 caaggctcgt tcgctcgcgt cgaacccgaa ggcgaaacca tgcgcatgtg ggaagccatc
    20221 gaaacctata tgaaccgcaa acagccgctc atcatcattg ccggtgcgga ctacggtcaa
    20281 ggctcaagcc gcgactgggc tgcaaaaggc gtacgcctcg ccggcgtgga agcgattgtt
    20341 gccgaaggct tcgagcgtat ccaccgcacc aacttgatcg gtatgggcgt gttgccgttg
    20401 cagttcaaac cgggtaccaa ccgccatacc ctgcaactgg acggtacgga aacctacgac
    20461 gtggtcggcg aacgtacacc gcgctgcgac ctgaccctcg tgattcaccg taaaaacggc
    20521 gaaaccgttg aagttcccgt tacctgccgc ctcgataccg cagaggaagt gctggtgtac
    20581 gaagccggcg gcgtgctgca acggtttgca caagactttt tagaaggtgt ggtagcataa
    20641 aggtagacgg tcttttttat gatttatgag aagaccgttt gaaaattatt tatggttaaa
    20701 tttttaattt aaattaaaca gtaaatatga agacacaaga agatgaggta actaagcaga
    20761 aaatttttaa tcatatgatt aataataaat catttttaaa tttccagttt tggacatttg
    20821 ctgctttgag tgcaggttca tttgcctttc taataagtgc agcaaatata gattctaaag
    20881 atagagactt gacgcttgaa atagccattg ttggatattc agtaagttta atattaaatt
    20941 ccatactatg ttttttaata agaggcatag aagacgatga gttatcggtt aaaatgttaa
    21001 atgaatttaa tttggataag cgtacttttt ggattcccat tctagcaacg tggagttttg
    21061 cgctttcgac acttttctta ttgtttacca ttagtctagt aggagcaatt actgctctta
    21121 taatggctgt tttagcaata attagtttta taaaatttac aaaaaaatca tagattttta
    21181 caatttgaag tggtgcgtaa atcgggcatt gatgcccgac acagaagttg taggttgagt
    21241 taagccccgg cattttgcta aatccaacgg ttttttcggg tttgcaaccc aacctacctc
    21301 tgctgctaat ctgcatcata caaaggagaa ctcgaaatgc cgcaaattaa aatccccgcc
    21361 gtttactacc gcggcggtac atctaaaggc attttcttca aacgcaccga cctgcccgaa
    21421 gcggcgcaac aagcaggcga ggcacgcgac aaaatcctgt tgcgcgtact cggcagcccg
    21481 gatccctacg gcaagcagat agacggtttg ggcaacgcca gttcgtccac cagcaaagcc
    21541 gtgattttgg acaagtccga acgcgccgat cacgatgtcg attacctttt cgggcaagtt
    21601 tccatcgaca aaccttttgt cgattggagc ggcaactgcg gcaacctcac cgctgccgtg
    21661 ggcgcattct ccatcgaaca gggcttggtc gataaaggca agattccttc agacggcatc
    21721 tgcacggtca aaatctggca gaaaaacatc ggcaaaacca ttattgccca tgtaccgatg
    21781 caaaacggcg cagttttgga aacaggcgat tttgagctcg acggcgtaac gttcccggca
    21841 gccgaagtac aaatcgaatt tcttgatcca gccgacggcg aaggcagtat gttcccaacc
    21901 ggcaatttgg tcgatgaaat tgatgtgccg aatataggcc gtttgaaagc cacgctcatc
    21961 aacgcgggca ttccgaccgt tttcttgaat gccgccgact tgggctacac aggcaaagag
    22021 ttgcaagacg acatcaacaa cgatgccgcg gctttggaaa aattcgagaa aatccgcgct
    22081 tacggtgcgc tgaaaatggg tctgatcagc gacgtatccg aagctgccgc tcgcgcgcac
    22141 acgccgaaag tcgccttcgt cgcgcccgcc gccgattaca ccgcctccag tggcaaaacc
    22201 gtgaacgccg ccgacatcga tttgctggta cgcgccctga gcatgggcaa actgcaccac
    22261 gcgatgatgg gtaccgcctc tgttgccatt gcgaccgccg ccgccgtacc cggtacgctg
    22321 gtcaaccttg ccgcaggcgg cggaacgcgt aaagaagtgc gcttcgggca tccttccggc
    22381 acattgcgcg tcggtgcagc cgccgaatgt caggacggac aatggacggc caccaaagcg
    22441 gtcatgagcc gtagcgcacg cgtgatgatg gaaggttggg tcagggtgcc tgaggattgt
    22501 ttttaaattg acgtagcatg ggtttgcccg cgagccataa aaaggtcgtc tgaaaaacaa
    22561 gtaaacatca aatcactgac cattcctttc ccttgccctg tggcggaagg cggcaaatca
    22621 caaggaagaa cacggaaacc ccgataaaag acagcttccc gtattaccgt cattcccgcg
    22681 caggcgggaa tccagacctg tcaatatgga ggattggcag gggaaaacag gtttcgtgag
    22741 ttctacattc tggattcccg ccacagcctg tcctcgcgta ggcggggacg gaataacgat
    22801 agaaaatgcg gcatatgctt tgcccaaaga ggccgtctga aacacactcc gcccaacgcc
    22861 catccttttt cagacgaccc cacaccaaaa aacaaccaca aactacaagg agaaacatca
    22921 tgtccgacca actcattctt gttctgaact gcggcagttc atcgctcaaa ggtgccgtta
    22981 tcgaccgcaa aagcggcagc gtcgtcctaa gctgcctcgg cgaacgcctg accacgcccg
    23041 aagccgtcat tacgttcagc aaagacggca acaaacgcca agttcccctg agcggccgca
    23101 actgccatgc cggcgcggtg ggtatgctgc tgaacgaact ggaaaaacac ggactgcacg
    23161 accgcatcaa agccgtcggc caccgcatcg cccacggcgg cgaaaaatac agcgagtctg
    23221 ttttgatcga ccaggccgta atggacgaac tcaatgcctg cattccgctt gcgccgctgc
    23281 acaaccccgc caacatcagc ggcatccttg ccgcacagga acatttcccc ggtctgccca
    23341 atgtcggcgt gatggatact tcgttccacc aaaccatgcc ggagcgtgcc tacacttatg
    23401 ccgtgccgcg cgagttgcgt aaaaaatacg ctttccgccg ctacggtttc cacggcacca
    23461 gtatgcgtta cgttgcccct gaagccgcac gcatcttggg caaacctctg gaagacatcc
    23521 gcatgattat tgcccactta ggcaacggcg catccattac cgccatcaaa aacggcaaat
    23581 ccgtcgatac cagtatgggt ttcacgccga tcgaaggttt ggtaatgggt acacgttgcg
    23641 gcgacatcga tccgggcgta tacagctatc tgacttccca cgccgggatg gatgttgccc
    23701 aagtggatga aatgctgaac aaaaaatcag gtttgctcgg tatttccgaa ctttccaacg
    23761 actgccgcac cctcgaaatc gccgccgacg aaggccacga aggcgcgcgc ctcgccctcg
    23821 aagtcatgac ctaccgcctc gccaaataca tcgcttcgat ggctgtgggc tgcggcggcg
    23881 ttgacgcact cgtgttcacc ggcggtatcg gcgaaaactc gcgtaatatc cgtgccaaaa
    23941 ccgtttccta tcttgatttc ttgggtctgc acatcgacac caaagccaat atggaaaaac
    24001 gctacggcaa ttcgggcatt atcagcccga ccgattcttc tccggctgtt ttggttgtcc
    24061 cgaccaatga agaactgatg attgcctgcg acactgccga acttgccggc atcttgtagc
    24121 caaaaaaggg acgagtccgc aaaaatgccg tctgaaattt tcagacggca ttttgtttgg
    24181 attttgggcg tacaatacgg aaaacatgac gataaggaca caaactatgg cacagttttt
    24241 cgccgttcat cccgacaacc cccaagaacg cctcatcaag caggcggtcg aaatcgtcaa
    24301 taaaggcggc gtggtcgttt atccgaccga ttcctgttat gccttgggct gcaaactcgg
    24361 cgataaggcg gcgatggaac gcatactctc catccgcaaa atcgatttga aacaccacct
    24421 gaccctgatg tgcgcagatt tgagcgagtt gggcacatac gccaaagtcg acaacgtaca
    24481 gtttcgtcag cttaaagccg ccacacccgg gccttatact tttattttac aggcgacgaa
    24541 ggatgtgccg gcgcgcacgc tgcacccgaa acgcaaaacc atcgggctgc gtattcccga
    24601 taatgccatt gcacaagccc tgctggggga attgggcgag ccgcttttaa gctgcaccct
    24661 gatgctgccc gaagacggcg aaccattgac cgatccttat gaaatccgcg agcgtttgga
    24721 acacgccgtc gatttggtga ttgacggcgg ctggtgcgga accgagccga ccaccgtcgt
    24781 cgatatgacc gacggcacgg aattggtgcg ccaaggttgc ggcgatacgg cggtgttcgg
    24841 tttgtaggga aaccgatgcc gtctgaagca tcggctgttc agacggcatt gcgcgccttg
    24901 ccggcggcag tccgaaatgc cggcgcgtat cgcgctcggt cggaatatcc gtttgaaacg
    24961 gcattttgat gcattactgc accgcaatcg gaattctcgg ttcgtagagc aggtcgtagg
    25021 tcggcttgtt gagcaggtct tggagcgtga aaccgtccag atacgtgaaa aacgacttca
    25081 tcgcgccgcc gagtatgccc gtcagccggc aggacggtgt aatcaggcat tcgttgttct
    25141 cgcccatgca ctcgaccagc tgcatcggtt cgaggtggcg gacaaccgag ccgatgttga
    25201 tgcggtcggg cggtgcggca agccgcagac cgccgccttt tccgcgcaca ctgtggagga
    25261 agccgccttt gaccagcgcg gtaacgacct tcatcagatg gcttttggaa atgccgtagg
    25321 ttacggcgat ggtactgatg ttgaccagcg catcgtcgtt gatggcagtg tagataagga
    25381 cgcgcagccc gtagtccgta tgttgtgtca aatacatgat tttctcggta tggattgtta
    25441 ttcttatcgg tacggtttaa ggttcacgga caatacctta atggttgaaa ccctgtccgt
    25501 cggggcggta gaatgcagcc tgtctgcggc ggtatgccgt ctgaaacatc cgcgctaccg
    25561 tttgagaatt tgttattgta actcaaaatc atgaaaccgt tgaaacgaca tcccgccctt
    25621 atcgggcttt cgcgtgacca ccaccattcg ctttccctgt gcgtgcgtct gttgcggacg
    25681 ccggaagaaa ggcatcggga cgaactcgaa ccgcattttt ccgaattgga aacccatttt
    25741 cgcgaagaag aagccaagtt tgccccaatt tggcagaatg tcgcccccga attgaaacaa
    25801 cgtttcgaga aagaccacgc ccgactgcgg cagatgatgg caagccccga atacggtaac
    25861 gcggcgtgga ataccgcttt tgccacaacc ctgcgcgacc acgcgcgctt tgaagaacgc
    25921 gagctgtttc ccgccgccga accgtttttg ccggcatgat tccgttttgc ggcaaatata
    25981 ttaatgataa acaaggaaca cacatgaaat ttaccaagca ccccgtctgg gcaatggcgt
    26041 tccgcccatt ttattcgctg gcggctctgt acggcgcatt gtccgtattg ctgtggggtt
    26101 tcggctacac gggaacgcat gagctgtccg gtttctattg gcacgcgcat gagatgattt
    26161 ggggttatgc cggactggtc gtcgtcgcct tcctgctgac cgccgtcgcc acttggacgg
    26221 ggcagccgcc cacgcggggc ggcgttctgg tcggcttgac tatcttttgg ctggctgcgc
    26281 ggattgccgc ctttatcccg ggttggggtg cgtcggcaag cggcatactc ggtacgctgt
    26341 ttttctggta cggcgcggtg tgcatggctt tgcccgttat ccgttcacag aatcaacgca
    26401 actatgttgc cgtgttcgcg ctgttcgtct tgggcggcac gcacgcggcg ttccacgtcc
    26461 agctgcacaa cggcaaccta ggcggactct tgagcggatt gcagtcgggc ttggtgatgg
    26521 tgtcgggttt tatcggtctg attggtacgc ggattatttc gttttttacg tccaaacggt
    26581 tgaatgtgcc gcagattccc agtccgaaat gggtggcgca ggcttcgctg tggctgccca
    26641 tgctgaccgc catgctgatg gcgcacggcg tgatgccttg gctgtcggcg gctttcgcgt
    26701 ttgcggcagg tgtgattttt accgtgcagg tgtaccgctg gtggtataaa cccgtgttga
    26761 aagagccgat gctgtggatt ctgtttgccg gctatctgtt taccggattg gggctgattg
    26821 cggtcggcgc gtcttatttc aaacccgctt tcctcaatct gggtgtgcat ctgatcgggg
    26881 tcggcggtat cggcgtgctg actttgggca tgatggcgcg taccgcgctc ggtcatacgg
    26941 gcaatccgat ttatccgccg cccaaagccg ttcccgttgc gttttggctg atgatggcgg
    27001 caaccgccgt ccgtatggtt gccgtatttt cttccggcac tgcctacacg cacagcatac
    27061 gcacctcttc ggttttgttt gcactcgcgc ttttggtgta tgcgtggaag tatattcctt
    27121 ggctgattcg tccgcgttcg gacggcaggc ccggttgaga caaaccgccg cagatttcgg
    27181 gtctgggcgg tttgcttttc agacggcagg gcggtcagtt gccgtccagc cagcggtcgc
    27241 gtgtggtttt ggcttcttca aaatagcggt acagggcttc gcggtcgtcg gtggtcagga
    27301 tgtttgccaa aacgtccaac tgtttgccca agccttgaac cagttgcagc aggctgtctt
    27361 tgttggcaag gcagatgtcc gcccacacgg cgggatgacc ggaggcgatg cgggtgaagt
    27421 cccgaaagcc cgtggcggcg aatttcagat attcctgtcc gtcggggtgg tcgagaatct
    27481 ggtggacata ggcgaaggcg gtcaggtggg gcatatggga gacggcagcg aaaaccgcgt
    27541 cgtggcgttg cgcgtccatc gtataaattt ccgcaccgac cgcgtgccac agttcttcta
    27601 ccaaggcaat gccgtctgaa tgttcgccgc cgtgtggcgt gatgatgagt tttctgtggc
    27661 ggaacagccc gaactgcgcg gcttgcgcac cgcttctgtc cgaaccggca atcgggtggg
    27721 cggcgatgca gcggtgcagg cggtcgggca gacagcggcg gaaggcttcg atgaccgaag
    27781 atttggtgct gccgacatcg gaaatccaag tgtgttccgg caaaacgggg cgcagcgcgg
    27841 tcaaaatggc gggaaaggtg gcgacgggcg tggcaatcag taccaagtcc gcaccgccga
    27901 tgctgtccgc gtcgatggca acggaggcac ggtcaatcac gccgcgttcc aatgcacgtt
    27961 cgaggttgtc gcggtcggtg tcgataccgg taacggtgcg gacgagtccc tgccttttga
    28021 ggtcgagaac gaacgaaccg ccgatcagcc ctacaccgat gagggcaata tggttcaaaa
    28081 tgggcatttg tgtaaacggt tttcgcaaag taccgtcatg gtagcctatc ggcggaatat
    28141 gccgcaaggt cggcaggaaa aaggagaaga aatggacaaa atcagagttg ccgccgtgca
    28201 gatggtgtcg ggcgtgtcgc cggaaaccaa cgtcgctgcc atgaaacgcc tggtcgcacg
    28261 ggcggcggag cagggtgtgg attgggtgct gctgcccgaa tattgggtgc tgatgggcgc
    28321 aaacgatacc gacaaactcg cgcttgccga gcctttgggc ggcggacgct ttcagacggc
    28381 attgagcgaa acggcgaaag aatgcggcgt ggtgctgttt ggcggaaccg tgccgctgca
    28441 aagccccgag gcgggcaagg tcatgaatac tttattggtg tacgggcgcg acggcaaacg
    28501 gacggggctg taccacaaaa tgcacctctt cggcttttcc ggtttgggcg aacgctatgc
    28561 cgaagccgat accatccgcg cgggcgggga agtgccgcac ttgtcggcag agggcgtgcc
    28621 ggtggcagca ggtatttgtt acgatgtccg ctttcccgaa tttttccgcc gccagctgcc
    28681 gtttgacgta ttgatgctgc ccgctgcgtt tacgcacacg acgggcaagg cgcattggga
    28741 gctgctgctg cgcgcgcgtg ccgtcgaaaa ccaatgttac gtcgtggcgg cggcacaggg
    28801 cggtttgcac gaaaacggac ggcgcacgtt cggacacagc atgattgtcg atccgtgggg
    28861 cgacgtgttg gacgtattgc ccgaaggcga aggcgttgtt acggcagaca tcgatgccaa
    28921 ccgcctgaac agcgtccgca accgcctgcc cgccttgaaa cactgggttt tggatgccgt
    28981 ctgaaggttt caaacggcat cggtgtcggg gaatcagcgg gctgtaggat gggcttcagc
    29041 ctgccatttc catcaatccc acatttctac cgttttcatc gaatccatcg aatccgcccc
    29101 tttcgacgac ccagtcctac gcaactgaac cgtcattccc acggaagtgg gaatctagaa
    29161 tctcggggtt tcagtcattt ccgatagatt cccgccgcgt cggaggtcta gattcccgcc
    29221 tgcgcgggaa tgacgggttt taagattacg gtgttgtcgg aacgcaactg aaccgtcatt
    29281 cccacggaag tgggaatcta gaatctcggg gtttcagtca tttccgatag attcccgccg
    29341 cgtcggaggt ctagattccc gcctgcgcgg gaatgacgga tttcgagatt acggtgttgt
    29401 cggaacgcaa ctgaaccgtc attcccacgg aagtgggaat ctagaatctc ggggtttcag
    29461 tcatttccga tagattcccg ccgcgtcggg ggtctggatt cccgcctgcg cgggaatgac
    29521 gaatttcgag attacggtgt tgtcggaacg aaactgaatc gtcattccca cgaaagtggg
    29581 aatctagaac gcggggtttg ggcaactgtt tttatccgat aagtttctgt gcggacaggt
    29641 ctggattccc gcctgtgcgg gaatgacggg tttcaagatt gcggtgttgt cgggaatgac
    29701 gaatccatcc atacggaaac ctgcaccacg tcattcccac gaaagtggga atctagaatc
    29761 tcggggtttc agtcatttcc gatagattcc cgccgcgtca gggggctgga ttcccgcctg
    29821 cgcgggaatg acgggtttca agattgcgct gttatcggga atggcgggtt tcaagattac
    29881 ggtgttgtcg ggaatgacgg ttcgggtatt tccacgcccg ccccgcgcct gtaaacggcg
    29941 agtgcatcaa aaatgccgtc tgaaggttca gacggcatcg gtatcgggga atcagaagtg
    30001 gtagcgcatg cccaatgaga cttcgtgggt tttgaatcgg gtgttttcca agcgtcccca
    30061 gttgtggta
//
LOCUS       DBBZXW010000013        29273 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.013, whole genome shotgun sequence.
ACCESSION   DBBZXW010000013 DBBZXW010000000
VERSION     DBBZXW010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29273
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.013"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(103..2478)
                     /gene="hmbR"
                     /locus_tag="ACJJD2_000536"
     CDS             complement(103..2478)
                     /gene="hmbR"
                     /locus_tag="ACJJD2_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent hemoglobin receptor HmbR"
                     /protein_id="HGG7579134.1"
                     /translation="MKPLQMLPIAALVGSIFGNPVLAADEAATETTPVKAEIKAVRVK
                     GQRNAPAAVERVNLNRIKQEMIRDNKDLVRYSTDVGLSDSGRHQKGFAVRGVEGNRVG
                     VSIDGVNLPDSEENSLYARYGNFNSSRLSIDPELVRNIEIVKGADSFNTGSGALGGGV
                     NYQTLQGRDLLLDDRQFGVMMKNGYSTRNREWTNTLGFGVSNDRVDAALLYSQRRGHE
                     TESAGNRGYAVEGEGSGANIRGSARGIPDSSKHKYHSFLGKIAYQINDNHRIGASLNG
                     QQGHNYTVEESYNLTASSWREADDVNRRRNANLFYEWMPDSNWLSSLKADFDYQKTKV
                     AAVNNKGSFPMDYSTWTRNYNQKDLDEIYNRSMDTRFKRFTLRLDSHPLQLGGGRHRL
                     SFKTFVSRRDFENLNRDDYYFSGRVVRTTSSIQHPVKTTNYGFSLSDQIQWNDVFSSR
                     AGIRYDHTKMTPQELNAECHACDKTPPAANTYKGWSGFVGLAAQLNQAWHVGYDITSG
                     YRVPNASEVYFTYNHGSGNWLPNPNLKAERSTTHTLSLQGRSEKGMLDANLYQSNYRN
                     FLSEEQKLTTSGTPGCTEENAYYGICSDPYKEKLDWQMKNIDKARIRGIELTGRLNVD
                     KVASFVPEGWKLFGSLGYAKSKLSGDNSLLSTQPLKVIAGIDYESPSEKWGVFSRLTY
                     LGAKKAKDAQYTVYENKGWGTPLQKKVKDYPWLNKSAYVFDMYGFYKPAKNLTLRAGV
                     YNVFNRKYTTWDSLRGLYSYSTTNSVDRDGKGLDRYRAPSRNYAVSLEWKF"
     gene            complement(2653..3282)
                     /locus_tag="ACJJD2_000537"
     CDS             complement(2653..3282)
                     /locus_tag="ACJJD2_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HGG7579135.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            3745..5079
                     /locus_tag="ACJJD2_000538"
     CDS             3745..5079
                     /locus_tag="ACJJD2_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HGG7579136.1"
                     /translation="MPPLIFATFPMKPFAENIPHSLRGNCCDEALPPHTVDCPECGCR
                     ADVPRLDSGEAAFCPRCGHKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPG
                     AASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALR
                     LATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGPAFYLMFALSVMLIRTSVSV
                     PQHWVYFQIGRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLS
                     ISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSAS
                     ILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFH
                     TYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHD"
     gene            5072..6733
                     /gene="pqiB"
                     /locus_tag="ACJJD2_000539"
     CDS             5072..6733
                     /gene="pqiB"
                     /locus_tag="ACJJD2_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HGG7579137.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELN
                     GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            6733..7251
                     /locus_tag="ACJJD2_000540"
     CDS             6733..7251
                     /locus_tag="ACJJD2_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HGG7579138.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            7255..7806
                     /locus_tag="ACJJD2_000541"
     CDS             7255..7806
                     /locus_tag="ACJJD2_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HGG7579139.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIDSDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDINTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            7796..8437
                     /locus_tag="ACJJD2_000542"
     CDS             7796..8437
                     /locus_tag="ACJJD2_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HGG7579140.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLNDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(8489..8713)
                     /locus_tag="ACJJD2_000543"
     CDS             complement(8489..8713)
                     /locus_tag="ACJJD2_000543"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HGG7579141.1"
                     /translation="MPSEPAGRLFQKTPYRCNFMRLYGVGFALQTAYASRSSLVFQSV
                     HDYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            8712..9070
                     /locus_tag="ACJJD2_000544"
                     /pseudo
     CDS             8712..9070
                     /locus_tag="ACJJD2_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9101..11953
                     /gene="gcvP"
                     /locus_tag="ACJJD2_000545"
     CDS             9101..11953
                     /gene="gcvP"
                     /locus_tag="ACJJD2_000545"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HGG7579142.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVTLRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVGDFAQAEEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDAFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTVGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHVVTDMHNASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVERGEWPKEDNPLVNAPHTASDVTGEWTHPYSREEAVFPL
                     PFVREHKFWPSVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(12418..13257)
                     /locus_tag="ACJJD2_000546"
     CDS             complement(12418..13257)
                     /locus_tag="ACJJD2_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HGG7579143.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADGAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            13542..13617
                     /locus_tag="ACJJD2_000547"
     tRNA            13542..13617
                     /locus_tag="ACJJD2_000547"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13575..13577,aa:Arg,seq:ccg)
     gene            complement(13682..14875)
                     /locus_tag="ACJJD2_000548"
     CDS             complement(13682..14875)
                     /locus_tag="ACJJD2_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HGG7579144.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(14896..15984)
                     /gene="trmA"
                     /locus_tag="ACJJD2_000549"
     CDS             complement(14896..15984)
                     /gene="trmA"
                     /locus_tag="ACJJD2_000549"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HGG7579145.1"
                     /translation="MNDYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASMIRCDRFEAASEAVNRLMPELIAAAAQSPELKKRW
                     YAVEFLSTLSGEMLVTMIYHKRLDAEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANRIGNIKIARLSAEEFTEAYTRKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            16131..17231
                     /gene="aroC"
                     /locus_tag="ACJJD2_000550"
     CDS             16131..17231
                     /gene="aroC"
                     /locus_tag="ACJJD2_000550"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HGG7579146.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDGVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIRVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRSAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            17323..17748
                     /locus_tag="ACJJD2_000551"
     CDS             17323..17748
                     /locus_tag="ACJJD2_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HGG7579147.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDAALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETLSVEAEAAESSAAE"
     gene            complement(17822..19807)
                     /gene="parE"
                     /locus_tag="ACJJD2_000552"
     CDS             complement(17822..19807)
                     /gene="parE"
                     /locus_tag="ACJJD2_000552"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HGG7579148.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDEHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVAGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(19874..20422)
                     /locus_tag="ACJJD2_000553"
     CDS             complement(19874..20422)
                     /locus_tag="ACJJD2_000553"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HGG7579149.1"
                     /translation="MNLTEGDTVLDREGYRPNVGIILINNRDEVFWGKRVREHSWQFP
                     QGGIKPGESPETAMYRELYEEVGLLPQHVKIIGRTRDWLRYDVPNNWVRREWRGSYRG
                     QKQIWYLLRLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELS
                     SRFLRGMESYEDFAARQSSDNR"
     gene            20564..21859
                     /gene="serS"
                     /locus_tag="ACJJD2_000554"
     CDS             20564..21859
                     /gene="serS"
                     /locus_tag="ACJJD2_000554"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HGG7579150.1"
                     /translation="MLDIQLLRSNTAAVAERLAARGYKFDAARFNALEEQRKAVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWL
                     LSIPNLPHEDVPFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(21937..22935)
                     /locus_tag="ACJJD2_000555"
     CDS             complement(21937..22935)
                     /locus_tag="ACJJD2_000555"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HGG7579151.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEAEKIGGRYVELNELYARSDIITLHCPSTPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSSAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(23060..24136)
                     /gene="prfA"
                     /locus_tag="ACJJD2_000556"
     CDS             complement(23060..24136)
                     /gene="prfA"
                     /locus_tag="ACJJD2_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HGG7579152.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITNALIAEHQAELLAAMGD"
     gene            complement(24226..24996)
                     /locus_tag="ACJJD2_000557"
     CDS             complement(24226..24996)
                     /locus_tag="ACJJD2_000557"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG7579153.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATRPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILWIAEIAAQIRGVGVADIAAITERNADSLLRP"
     gene            complement(24999..25991)
                     /locus_tag="ACJJD2_000558"
     CDS             complement(24999..25991)
                     /locus_tag="ACJJD2_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HGG7579154.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNVRIPNQDAADVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSEGWGADEVKHELQRLGLV"
     gene            complement(26058..26741)
                     /locus_tag="ACJJD2_000559"
     CDS             complement(26058..26741)
                     /locus_tag="ACJJD2_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG7579155.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(26930..28264)
                     /gene="glmM"
                     /locus_tag="ACJJD2_000560"
     CDS             complement(26930..28264)
                     /gene="glmM"
                     /locus_tag="ACJJD2_000560"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HGG7579156.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLVGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLAAVCADWQPYPQTMINVRIGKGQNWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(28394..29245)
                     /gene="folP"
                     /locus_tag="ACJJD2_000561"
     CDS             complement(28394..29245)
                     /gene="folP"
                     /locus_tag="ACJJD2_000561"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HGG7579157.1"
                     /translation="MARHGWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAKTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLVEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGAVELLARQTDTGICLMHMQGLPETMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGF
                     PLLIGVSRKRMIGELTGEADAAARVHGSVAAAVAAVARGAQIVRVHDVKATADALKVW
                     EALGINL"
BASE COUNT         6659 a         8107 c         7687 g         6820 t
ORIGIN      
        1 cccatcacac agatttacgg taaaaagccg tccgaatgag ttcttgaaca caattcggac
       61 ggctttaatt ttcaacaagg cgattaattc aataatacca gattaaaact tccattccag
      121 cgatacggcg taattacggc ttggggcgcg gtagcggtct aagcctttgc catcgcggtc
      181 gaccgagttg gtggtgctgt agctatacag gccgcgcagg gaatcccaag tggtgtattt
      241 gcggttgaac acattatata cgcctgcacg caaagtcagg tttttagccg gtttgtagaa
      301 gccgtacata tcaaacacat aagccgactt gttcagccac gggtaatctt ttaccttttt
      361 ctgcaaaggc gtaccccagc ccttgttttc ataaacggtg tactgcgcat ctttggcctt
      421 tttcgcgccc agataggtca ggcgggagaa tacgccccat ttttcgctcg gactttcata
      481 gtcgataccg gcaatcactt tcagcggctg tgtggacagc aggctgttgt cgcccgacag
      541 tttgcttttc gcataaccca gcgagccgaa cagtttccaa ccctcaggaa caaaagacgc
      601 tactttgtcc acattcagac ggcctgtcag ctcgataccg cggattctgg ccttgtcgat
      661 atttttcatc tgccaatcca gtttttcttt gtaggggtcg ctgcatatac cgtagtaagc
      721 attttcctca gtacagccgg gagtgccgct ggtggtcagc ttctgctctt cagacaggaa
      781 attgcggtaa ttgctttgat acaggttggc atccagcatg cctttttcgc tgcggccttg
      841 cagagacagg gtgtgggtgg tgctgcgctc ggctttcagg ttgggattag gcagccaatt
      901 acccgaaccg tggttgtagg tgaaatacac ttcggacgca ttggggacgc ggtagccgga
      961 agtaatgtcg taaccgacat gccaagcctg attcagttgc gccgccaagc cgacaaaacc
     1021 gctccagcct ttataagtgt tggctgcagg tggtgttttg tcacaagcat gacactcggc
     1081 attcaattcc tgaggcgtca ttttggtgtg gtcgtaacgg atacctgcgc ggctactgaa
     1141 cacgtcgttc cattgaattt ggtcagacag tgagaaaccg tagttggtgg ttttcaccgg
     1201 atgctggata ctgctggtgg ttcgaacaac acggccgctg aagtaataat cgtcgcggtt
     1261 taggttttca aaatcacggc ggctgacgaa agttttaaac gacaggcggt gtcgcccccc
     1321 cccgagttgc aacggatggc tgtccaaacg caaagtaaaa cgtttgaatc gggtgtccat
     1381 gctgcggttg tatatttcgt ccaaatcctt ctgattatag ttgcgcgtcc aggtggaata
     1441 atccatcggg aacgagcctt tgttgttaac cgccgccact ttggttttct gataatcgaa
     1501 gtccgccttc aaagacgaca accaatttga atcaggcatc cattcgtaaa agaggttggc
     1561 attgcgccgt ctgtttacgt catcggcttc gcgccaggaa gaagcggtca ggttataaga
     1621 ctcttcaacc gtgtaattat gtccctgctg gccgttaagc gatgcgccga tgcggtggtt
     1681 atcgttaatt tggtaagcaa tcttacccaa aaagctgtgg tatttgtgtt tggacgaatc
     1741 agggataccg cgtgccgaac cacggatatt cgcgccactg ccttcccctt ccacagcata
     1801 gcctcggttt cccgcgcttt cggtttcatg accgcgacgt tgcgaataca gcaaagcagc
     1861 atccacgcgg tcgttactca caccgaaacc gagagtattt gtccattcac ggttacgcgt
     1921 gctgtaaccg tttttcatca tcacgccgaa ttgcctgtcg tccaacagca aatcacggcc
     1981 ttgcagcgtt tggtaattca caccgccgcc caatgcacca ctgccggtat tgaaagagtc
     2041 tgcgcccttc acgatttcga tgttgcgcac gagttcgggg tcgatagaca aacgcgagct
     2101 gttgaagttg ccataacggg cgtacagcga gttttcttca gaatcaggca ggtttacacc
     2161 gtctatgctc acgccgacac ggttgccttc cacgccgcga acagcaaagc ctttttgatg
     2221 gcggccgctg tcgctcaagc cgacatcggt ggaatagcgc accaagtctt tattgtcgcg
     2281 tatcatttct tgtttgatac ggttaaggtt gacgcgttcc acagccgcag gcgcattgcg
     2341 ctgaccttta acgcgcactg cttttatctc tgccttaacg ggtgtggttt cagttgcagc
     2401 ttcatctgct gccaagaccg gattgccgaa aatactgccg accagcgcgg cgatagggag
     2461 catttgtaat ggtttcatat tatcaactca agatgtatgg attgttcatc catcggttag
     2521 cgaataatag attttatgat aatcattaat atttaataag acagtaatcc atgtaaacaa
     2581 agccgcgccg tgtaattaaa ggtccctgca aacagctatg ccgagacctt gtttatttgg
     2641 ttcgattatt ttttagtgcc tgtgcggcat cattccttcc ggtgcttcgg catcggctgc
     2701 caaaccgaag gtttcgcgca acacgacttt gtagaatgca aaggcttcgc gcgcgccttg
     2761 gatggcttcc gcttcggctt cgggagtcag gttcaaagcg ttcagatgct cgacgaaggc
     2821 acgccagtgt ttgccgcgcc cgtcgggatg cggagcgagg tggcgcgcgc cgtgttcgcc
     2881 gttgtaatcg agtttttggg cgtgtttgaa caaaaacgcc gcgcccaaat tggatccttc
     2941 ggcgcaataa agccagccga ttgctttgtt gccggtttca tgcggcagcg gtttgccgta
     3001 ttcgtaaggt ttgtcaccca aatctgcaag gtcttgcgtt acggcatcgt atcgcgccat
     3061 gtattccagc tcgggaatgg ctttgtttaa ttcggcatct ttatagatgt ggtcgacagc
     3121 cttgtggaaa acggattgga gtttcaaaaa tttgatgtag ttttctttgc tgacaaacgg
     3181 ttggacagac ataacgaggt tatccacgct gtcgtgaacc gccgtggtat ccgccttcaa
     3241 gcgtttggca aatgtcaatg cttgattttc ggtttcactc atattttttc ctttgtcggt
     3301 aagggataag gatgcggtgc gggcaaaatc cgcacttgcc cgcatatata gtggattaac
     3361 aaaaaccagt acggcgttgc ctcgccttag ctcaaagaga acgattctct aaggtgctga
     3421 agcaccaagt gagtcggttc cgtactattt gtactgtctg cggcttcgcc gccttgtcct
     3481 gatttttgtt aatccactat aaaaataata aagaatcata aacgaaattt attatcacat
     3541 atttttggaa aaaatatcat ttgcgtgatg tttttaagca ggtattttac tattctttac
     3601 agaatcggga ttttatcaaa tgggttcggc agtcggcgga caaccgctca aaaaatattt
     3661 ttgccggaca ccaagggttt gttcatactg ccgaacctgc cggttttgca tcctgattgg
     3721 gtgtatcgcc ttttttcctt tataatgccg ccacttatat ttgccacttt cccgatgaag
     3781 ccgtttgccg aaaatatccc ccacagcctt cgcggcaact gctgcgacga agccctgccg
     3841 ccgcatacgg tagattgtcc ggaatgcggc tgccgcgcgg atgtaccccg gttggacagt
     3901 ggagaagcgg cgttctgtcc ccgttgcgga cacaaactct tcagggtggg caggcatcct
     3961 ttttccgccc cgcccgccta tgcggcggct tcgctgattt taatggcgtt tgcttacggt
     4021 atgacgtata tcgaggtcgg gataccgggt gcggcatccg tcctttcgct gcccgagatg
     4081 atgcgcctga tggtgtttca ggattatggt tttttggccg aagtgatgtt tgtgctgact
     4141 ttcggcgcgc cggttctgtt tctgctgctg tgcctgtatg tctatgccgc gctgatacgg
     4201 aaacaggcgt atcctgcgct gcgtttggca acgcgtgtga tggtgcgctt gagacaggcg
     4261 atgatggtgg atgtgttttt tgtttccact ttggtggcgt atatcaagct ctcgtctgtg
     4321 gcagaggttc gcttcgggcc ggcgttttat ctgatgttcg cgctgtcggt tatgctgatt
     4381 cggacttcgg tatcggttcc ccagcattgg gtgtattttc aaatcgggcg gctgacgggg
     4441 gataatgcgg ttcagacggc atcggaaggt aaaacctgtt gcagccgctg cctgtatttc
     4501 cgcgacagtg ccgaatcccc ctgcggcgtg tgcggtgcgg aactgtaccg ccgacggccg
     4561 aaaagtctga gtatttcgtc ggcgtttctg acggcggcgg ttattttgta tttccctgcc
     4621 aatatcctgc cgattatgat ttcgtccaat cctgccgcca cggaggtcaa taccatcctt
     4681 aacggcatcg cttatatgtg ggacgagggc gacaggctga ttgcggcggt tattttcagc
     4741 gcgagtattt tggtgccggt actgaagatt gcggcaatgt cggttttgat tgcgtccgcc
     4801 cgcttcgctt tgccaacggg tgcaaagaaa ttgtcgcacc tctaccgcat caccgaagcg
     4861 gtcggccgct ggtcgatgat tgatattttt gtgattatta ttttgatgtg ttcgttccac
     4921 acttatgccg cgcgcgtcat tccgggcagt gcggcagtct atttctgcct ggtcgtgatt
     4981 ctgacgatgc tgtccgccta ttatttcgac ccgcgcctgc tttgggacaa acgcgcttca
     5041 gacggcattg ctttcaatga aacggaaaaa catgactgac aacagccctc ctccaaacgg
     5101 acacgcccaa gcacgcgtcc gcaaaaacaa caccttcctc tctgccgtct ggctggttcc
     5161 gctgatcgcg ctgattgccg gcggctggct ttgggttaag gaaatccgca acagggggcc
     5221 tgtggttacg ctcttgatgg acagcgcgga aggcattgag gtcaacaata cggtcatcaa
     5281 agtattgagc atcgatgtcg gacgcgttac ccgaatcaaa ctgcgcgacg accaaaaagg
     5341 cgtggaagta accgcccaac tcaatgcgga cgtatccggc ctcatccgca gcgataccca
     5401 gttttgggtg gtcaagccgc gtatcgacca aagcggcgta accggtttgg gtacgctgct
     5461 ttcgggttcg tacatcgcct ttacacccgg caaaagcgac gaggcaaaag acgtgttcca
     5521 agtgcaggac attccgcccg ttaccgccat cgggcaaagc gggctgcgct tgaatttgat
     5581 tggtaaaaac gaccgcatcc tcaacgtcaa cagccctgtt ttgtatgaaa actttatggt
     5641 cgggcaagtc gaaagcgcgc atttcgaccc gtccgaccaa agcgtgcatt acaccatctt
     5701 catccaaagc cccaacgaca aactgattca ttccgccagc cgtttctggc tggaaagcgg
     5761 catcaatatc gaaaccacag gcagcggcat caaactcaat tccgcccctc tgcctgccct
     5821 gctgtcgggc gcgatttcat ttgattcgcc gaaaaccaaa aacagtaaaa acgtcaaaag
     5881 cgaagacagc ttcacgcttt acgacagccg cagcgaagtc gccaacctgc ctgacgaccg
     5941 ctcgctgtac tacaccgcgt ttttcaaaca atccgtgcgc ggcctgaccg tcggttcgcc
     6001 cgtcgagtac aaagggctga atgtcggcgt ggtttccgac gttccttatt tcgaccgcaa
     6061 cgacagcctg cacctgtttg aaaacggctg gatacccgta cgcatccgca ttgaaccttc
     6121 ccgtttggaa atcaatgccg acgaacaaag caaagaacat tggaaacaac aatttcagac
     6181 ggccttaaac aaaggcctga ccgccaccat ctccagcaac aacctgctga ccggaagcaa
     6241 aatgattgag ttgaacgatc agccttccgc atcacctaag ctgcgaccgc ataccgttta
     6301 tgcaggcgat accgttatcg cgacccaggg cggcggtttg gacgatttgc aggtcaaatt
     6361 ggcggatttg ctggacaaat tcggcaaact gcctttagat aagacggttg ccgaattgaa
     6421 cggttcgctt gccgagctca aatccacact caaatctgcc aatgccgccc taagctccat
     6481 cgacaaactg gtcggcaaac cgcagacaca aaacattccg aacgaactga accaaaccct
     6541 gaaagagttg cgcacaaccc tgcaaggcgt atcgccgcaa tcgcctatct acggcgacgt
     6601 acaaaatacg ttgcaaagtt tggacaaaac cttaaaagac gttcaacccg tcattaacac
     6661 tttgaaagaa aaacccaacg cgctgatttt caacagcagc agcaaagacc ccatcccgaa
     6721 aggaagccga taatgcgcct cttcccgatt gccgccgccc tgacgcttgc cgcctgcggt
     6781 actgtgcaaa gcacacaata tttcgtgttg cccgacagcc gctacatccg tcctgcaaca
     6841 caaggcggcg aaaccgccgt cgaagtccgt cttgccgaac cgctcaaacg cggcggactg
     6901 gtctatcaaa ccgaccccta ccgcctcaac accgcacaaa accacgtttg ggcagacacc
     6961 ttggacgata tgctcgaagc ggcgttgagc aatgcattca accgtttgga caacacacgc
     7021 atctttgttc ctgcctcacg cagcggcagt accgaaaaat ggacggtcta tatcgacgca
     7081 ttccaaggca gctacacggg caaaaccctc atcagcggct acgccgtcct acccgacggt
     7141 acgaacagac ccttccatat cgaaaccgaa cagcagggtg acggctacgc cgcgatgacc
     7201 gccgcactcg aacagggact gaaacaggcg gcgcaacaga tggtcgagta aaccgtgaac
     7261 tattgcgaat ttgccgcctc acttcccgaa aacaccgata acccgaacaa acattaccac
     7321 gacacgcaat acggttttcc gattgacagc gacaacggac tgtttgaacg gctggtgttg
     7381 gaaatcaatc aggcaggatt aagctggacg ctgatgctga agaagcggca ggcgtttcag
     7441 acggcatttg aaggtttcga catcaatacc gttgccgcct tcgacgacac cgaccgcgaa
     7501 cgcctgcttg ccgacgcggg catcgtccgc aaccgcctga aaatcgatgc cgccattttc
     7561 aatgcacggc aaatccaagc gttgcaacaa gaatacggct cgttcaagaa ctggctcgac
     7621 gcgcaccatc cgcgaagcaa agacgaatgg gttaaactct ttaaaaaaca tttcaaattc
     7681 gtcggcggcg aaatcgtcgg cgaatttctg atgagtaccg gctacctcaa aggcgcgcac
     7741 gccgaaagct gtccggttta ccgtgaaacc ctgaaatacc acccgaaatg gctcgatgcc
     7801 atctgaaaaa ccaatgaaca gaagaacctt cctcctcggc gcaggcgcgt tgctccttac
     7861 cgcctgcggc agaaaatccg cccgaaccca cgccaaaatt cccgaaggaa gcaccgtact
     7921 tgccttgggc gattcgctta ccttcggcta cggcgcaaac cctggcgaat cctaccccgc
     7981 gcaactgcaa aaactgacgg gttggaatat tgtcaacggc ggcgtatcgg gcgatacatc
     8041 cgcccaagcc ctgtcgcgcc tgcccgcgct gttggcacgc aaacccaagc ttgtgattgt
     8101 cggcataggc ggcaacgact ttctgcgcaa agttcccaag gagcagaccc gcgccaatat
     8161 cgcgaaaatc atcgaaaccg tgcagaagga aaacatcccc gccgtcctcg tcggcgtgcc
     8221 gcacattacc ttgggcgcgt tgttcgggca tttgaacgat catccgctgt atgaggattt
     8281 gtccgaggaa tacggcattc cgctgttcgg cggcgcgtgg gcggaaattt tgggcgataa
     8341 taatctgaaa tccgaccaaa tccacgccaa cggcaaaggc tatcggaaat ttgccgaaga
     8401 tttgaatcaa tttttgagaa aacaggggtt tagataaaca aaggtttatc cgcacccaag
     8461 ttgtttatat atagtggatt aacaaaaatc aggacaaggc gacgaagccg cagacagtac
     8521 aaatagtacg gcaaggcgag gcaacgccgt actggtttaa atttaatcca ctataatcat
     8581 gaaccgactg gaacaccaaa ctgcttcggg acgcatatgc cgtctgaagt gcaaaaccta
     8641 cgccatacag ccgcatgaag ttgcagcggt atggcgtttt ttgaaaaaga cggcctgccg
     8701 gttcagacgg catgaccgac cgtccgagcc tgctgtggat aaagcccgga caggctgaaa
     8761 tcatggaata ttgcgaacct gaagaagcat ccgacccgta cgcaacatac aggcgtgcca
     8821 acctgatggc gaggctgccg ctgtttgtcg tgattttggt tctgctcaat attgttttcc
     8881 gcttccggcg catcccttag cttggctggt gcctgcaggt ttcatggttt tggtcggcgg
     8941 ctttccctta tcgctgccgc ttgtggcgct gcttgtcctg acctgctgca ttctggcgca
     9001 ttgtccgcca ttatcccgtc ttttgtgcta cccttgcccg aatcatccga tgtctaaaaa
     9061 ttctgcctga tggcagccct acaaacccga aggagtagaa atgaaactgt ccgaactgtt
     9121 caaccccgac gaatttgccg cgcggcattt gagtttcggc gacgaagcgg cgttgcttgc
     9181 cgctgtcggc gagaaaagta tggacgattt tgtcggcaac accgtgccgc aaagcatccg
     9241 tatgccgtcc gaactcgatt tgcccgatgc cctgaccgaa gcggacgcgt tggcaaaatt
     9301 gaaaggcatt gcgtcgaaaa acgtgatcaa caagtcctat atcggtttag gctattaccc
     9361 gacccgcgtg ccgaatgtga ctttgcgcaa cgtattggaa aatccgggct ggtataccgc
     9421 ctacacgccg tatcaggcgg aaatcgcgca gggtcgtttg gaagcattgt tgaacttcca
     9481 acaagtgtgc atcgatttga ccggttttcc cgtggcgggc gcgtctttgc tggacgaggc
     9541 aactgccgcg gctgaagcga tggcgatggc gcaccgagtg ggcaaagtga aatccgaacg
     9601 tttctttgtg gatgcgcgcg tgtatccgca aactttggac gtgatgaaaa cccgcgccaa
     9661 atatttcggc tttgaattgg tggtcggtga ttttgcccaa gcggaggaag gcgaatactt
     9721 cggtgcgctg ttccaatacg tcggcaaaga cggcgatgtg caagacttgc aggacgttat
     9781 cggccgtctg aaagccaaag gcacaatcgt tgccgttgca gccgacatta tgagcttggt
     9841 tttgctgaag tctccggctg aactaggtgc ggatattgct ttgggcaaca cgcaacgctt
     9901 cggcgtgcct atgggctttg gtggtccgca cgccgcttat ttcgcgttta aagacgagtt
     9961 caaacgttcc gccccgggcc gcatcatcgg cgtatccaaa gacgcatcag gcaaacctgc
    10021 cttgcgcatg gcgttgtcca cccgcgagca acacatccgc cgcgaaaaag cgacatccaa
    10081 tatttgtacc gcgcaggcat tgctggcgaa cttggcgggt atgtacgccg tttaccacgg
    10141 ccctgaaggt gtgaaacgca tcgccaaccg cattcacgcg ctggcttctg cctttgccga
    10201 tgcgctggtt tcagacggcc tgaatgtggt tcataaggtc ttcttcgata ccgttaccgt
    10261 cgatttcggc aacaaagaga aagcagacca agtgtttgcc gctgctttgg aatcgggcta
    10321 taacctgcgc cgcgttaacg atactcaagt tgcggctgca ttccacgaaa catcggcatg
    10381 cgaagatttg gttgatttgt accgcgcgtt taccggcaag gatgcgttcg catttgccga
    10441 tgatgtcaaa ggccgtctga acgccgaatt gctgcgtcaa gatgacattc tgcaacatcc
    10501 tgtgttcaac cgttaccaca ccgaacacga aatgttgcgc tatctgaaaa aactcgaaga
    10561 ccgcgatttg gcgatgaacc gcagcatgat ttcgctcggt agctgcacca tgaaactcaa
    10621 cgcgactgcg gaaatgctgc cgattacttg ggcggagttc tccgacatcc acccttacgc
    10681 tcccgaagcg caaaccgtcg gctaccgcga attgcttgcc gatatggaaa acagcctgaa
    10741 agccatcacc ggctttgacg caatttcctt ccagcccaac tccggcgcgc agggcgaata
    10801 cagcggtatg cttgccatcc gccgctatca ggaagcgcaa ggcgaagcgc agcgcaacat
    10861 ctgcctgatt cccaaatccg cccacggcac caaccccgcc accgccgcca tgctcggttt
    10921 gaaagtcgtc gtcgtcgata ccgacgaaca cggcaacgtc aacatcgacg atttgaaagc
    10981 caaagccgag caacaccgcg acgctttgtc cgccatcatg attacctatc cgtccaccca
    11041 cggcgtgtac gaagaaggca tccgcgacat ctgccgcatc atccatgaaa acggcggaca
    11101 ggtttatatg gacggcgcca acctcaacgc tcaaatcggc atcatgcagc ctgccgaagt
    11161 cggcgcggac gtgttgcaca tgaacctgca caaaaccttc tgtatccctc acggcggcgg
    11221 cggcccgggc atgggtccga ttggcttgaa agcccatctg gctccgttcg caccaggcca
    11281 tgtggtaacc gatatgcaca acgccagtgc cgatcaaact gccgtggctg ccgcagcttt
    11341 cggttctgcg tccatcctgc cgattacttg gatgtacctg accatgatgg gcaaacaagg
    11401 catggagcag gcaacacgct gggcattgct caacgccaac tacgttgcca aacgcttgag
    11461 cgaagactat ccgattctgt atacaggcaa aaacggccgc gtcgcgcacg aatgtatcgt
    11521 cgacttgcgt ccgctcaaag ccgaaagcgg cattaccgaa accgacatcg ccaaacgcct
    11581 gatggactac ggcttccacg ccccgaccgt ctccttcccc gttgccggca cgctgatgat
    11641 cgagccgacc gaaagcgaga gcaaagccga actcgaccgc ttcatcgccg ccctgaaaca
    11701 aatcaaacag gaagtgttga aagtcgagcg cggcgaatgg ccgaaagagg acaacccgtt
    11761 ggtgaacgct ccgcataccg catccgacgt aactggcgaa tggacgcatc cgtattcccg
    11821 cgaagaagcc gtcttcccat tgccgttcgt ccgcgaacac aaattctggc cgagcgtcaa
    11881 ccgtgtggac gacgtgtacg gcgaccgcaa tctcgtgtgc agctgcccac cgatggaaaa
    11941 ttatgaagac tgaccgttga aaccccgaag acaaatgccg tctgaaacac tttcagacgg
    12001 cattttcgtc gacggcagac tggttgcacc aatacacgta tctcgactat aactttaaaa
    12061 caaatgagtt aaaccagtat ccatacatca gcttttttat catcctactt tttattcatc
    12121 cgatcgtgca aacagatttc aaagatgaaa agcctattca caccctttga tgtcatttcc
    12181 acacggacaa acaaatatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc
    12241 tcaaagagaa cgattctcta aggtgctcaa gcaccaagtg aatcggttcc gtactatctg
    12301 tactgtctgc ggcttcgtcg ccttttcctg atttttgtta attcactata aattcccata
    12361 aaaaaacgga gcagatacct gccccgtttt tatttaatcc gaaattttaa tctaaattta
    12421 aaattttgca ccggattggt ttgccatata atcaacagcc gctttgactt cgtcatcgct
    12481 caaaccggca ttgccgcctt tggcaggcat cgcgttaaag ccttcaaggg cgtgtttgtg
    12541 caaggtttct ttgccttttt tgatacgcgg tgcccaatcg tcttttttgc ctatgccggg
    12601 aataccggga atcgaaccgc cgtggcacac ctgacaggtt gcttcgaaga cttttttacc
    12661 gtcaacgccg accgcagggg ctgccgcacc cttgtcttct gccttcgctt ctgccggagc
    12721 tgcaccatcg gcaggagcag aagctgttcc tgaagcggca ttgtcggcag gcgcagcctc
    12781 atcaggattc gggaaagaac cgccgctttt gttcgccatg taagtaatcg cccgtttgag
    12841 ttcctgatcg gtcaggtctg ccgcaccgcc tttggcaggc atggcgttaa agccgttcag
    12901 cgcgtgttgg aacaaggtat cgaagccttg cgcgatacgc ggtgcccaat cgccgttgtg
    12961 ttccagtttc ggagcgttcg gcacattgct gtccgccgcg tggcattgga tacagatttt
    13021 gccgaaaatc tgttcgcctt ggcgttcgcc gacggggatg ccgtcgccca tcgtcaattg
    13081 tccgacgggc tggatacggg tctgcgttgc cgcttccgta gtggcatcga catcgccgaa
    13141 cgagccgctg cccgccagct taatcaggaa ataaaggact gcaataacaa taacgatacc
    13201 gctcacaagg gtaaacagtg cagagccttg ggctttgttg tcgcggagtt gtttcatttg
    13261 gtaggcctcg ccgtcaggtt aggttgtgct gtaaattata gtttggtgtg ttaaacgcag
    13321 ttaacaatat tttgctggat tatactgaat tcacagggtc tttccaatcg ctatcattga
    13381 aaatatgaaa aaatttgcca acggtatctg tataaaacaa ataatccttt gaaaataatg
    13441 gtttatcctc aagaaaactc tccttatgcc gccatacgcc gcctgccggc gcaagataac
    13501 ctttgccaat ttgcagaatt tacgttaacc ttacgtttta cgcacccata gctcagttgg
    13561 aagagtgtca gtttccgaag ctggaggtca caggttcgat ccctgttggg tgcgccaatt
    13621 ataaagagac cgtctgaaag ataaatattt ttcagacggt cttttgactt acttcaaact
    13681 cttatttcaa gacttccgca aatgcgcggg caacatagtc ggtattcgac gtattcagtc
    13741 cggcgacgca catcctgccg gaatccagca ggtaaacggc aaattcgtcg cgcagcctgc
    13801 ggacttgttc cacgctcaat cctgtgtagc cgaacatgcc gcgctgtttg atgaaataag
    13861 tgaaatcgcg atcggggatt tgcgcagtta agacatcata aagtttctgc cgcatcgcac
    13921 ggatgcggtc gcgcatcata taaacctcgt tttgccacaa ggcgtaaagt tcggggctgt
    13981 tcatcacgtc ggcggcgata tacgcgccgt gcgcgggcgg gctggagtag atgcggcgga
    14041 cagtgaattt gagctgtccg aacaccaaat ccgcttcttc cttattcggg caaaccacgc
    14101 tcaggccgcc gacgcgctcg ccgtagagcg acaggttttt tgagaaggaa ttgctgacga
    14161 acaagggcaa ttccatttcc accgctttgc ggacggcgta ggcatcgctg tccaaatcgc
    14221 cgccgaagcc ttggtaggcg atgtccataa acggaatcag tttgcgcgtt ttgatgatgt
    14281 gcaacacttc gtcccattgt tgttccgaca tatccacgcc ggtcgggttg tggcagcagg
    14341 gatggaggat caggacgctg ttttcgggca gggtgttgaa aaacgcggtc atttcgtcga
    14401 atttcacgcc aacagtggca gggtcgtaat atgggtaagt gccgacctcg aaacctgcgc
    14461 cttcaaaaat gccgcgatgg ttgtcccaag tcgggtcgct gacgtaggcg cgcgcttcgg
    14521 gaaaccagcg gtgcaggaag tccgccccga ctttgagtgc gcccgagccg cccaaggttt
    14581 gtacggtagc gatgcgtcct tgcgcgagcg cagggttgtc tttgccgaac aataaatgct
    14641 gcaccgcgct gcggtaagtg tccaagcctt ccatcggcag gtagggcgac ggcgcaggcg
    14701 tggcggcgcg ggcggtttcg gcacggcgca cggattccaa cacgggcatt ttgccttcgt
    14761 cgtcgaaata aatgcctatg ctcaaattga ctttttcagg gcgcgggtcg tttttgaagg
    14821 tttcgaccaa actcaaaatc gggtcgcccg gatagtattc gatgtgtcgg tacatagtcc
    14881 ttacctttta ctttttcaaa ggattttctt tttcaacaat acaccacttt cgatatggtg
    14941 cgtaaacggg aattggtcga acagggcggc gcgttcgacc gcatgggttt ccaccaaggt
    15001 gtccaaattg gcacgcagcg tttcgggatt gcaggaaatg tagatgatgt tgtcaaactg
    15061 cgacaccagc ttcaaagttt cctcatcgat accggcacgc ggcggatcga cgaaaatagt
    15121 ggaaaatgcg taatccgtca aagcaatacc gccatcctta aggcgtttaa actcacgttt
    15181 tctggtatag gcttcggtaa attcttcagc agacagacgg gcgattttga tgttgccgat
    15241 gcggttggct tcgatattcc attgcgccgc gctgatggag gttttggaga tttcggttgc
    15301 caaaacacgt tcaaactttt cagataaagg aagcgtaaag ttgccgtttc cgcaatacag
    15361 ttcgagcaaa tccccatcca atccttctgc tgcaccgcag gcccattcaa gcattttctg
    15421 acacacggcg gcattcggtt gggtaaaact gccttcaatt tgccgataac ggaaatcccg
    15481 gttgccgacc ttcaaagttt ccgttacata gtcctgtttt aagactattt tctgtcccct
    15541 gctccgccca ataacggaaa tatccaactg ttgctgtaac gcttgcgccg cctgcatcca
    15601 ctcagcatca agccttttgt ggtaaatcat ggtaaccagc atttccccgc tgagcgtgga
    15661 cagaaattcg acggcatacc agcgtttttt gagttcgggg gattgcgcgg cggcggcgat
    15721 cagctcgggc atgaggcggt tgacagcctc ggaagctgct tcaaaacggt cgcagcgtat
    15781 catgcttgcg ccgctggctt tctgcccttt ttcaaacatg gcataaaaca tttccccgcc
    15841 ttcgtgccaa atacggaact cggcacgcat acggtaatgt ttgtccggag attcgtacac
    15901 ttcccactca ggaacatcca aacctgcaaa aagggtttta aggtagtctt ttttaccttg
    15961 aagctgctgc gtgtagtcat tcatatcgct atcctgaaaa atcagaccgg attataagcc
    16021 gatttgcctc gccgcacgca aactctttga ctgccgcccc ttcaatgacg gacgggcttt
    16081 tgtgctaaaa tccgccatct ttccacacta taccgataaa gggaaaaatc atggcaggca
    16141 acactttcgg acaactcttc accgttacca ccttcggcga aagccacggc gcgggtttgg
    16201 gctgtatcat cgacggctgc ccgcccggct tggaattaag cgaagcggat atccaatttg
    16261 acctcgaccg acgcaaaccc ggcaccagcc gccacgttac ccaacgccgc gaagccgacc
    16321 aagtcgaaat cctctccggc gtattcgaag gcaaaaccac cggcacgccc atcgccctct
    16381 taatccgcaa taccgaccag cgcagcaaag actacggcaa catcgccacc agcttccgcc
    16441 ccggccacgc cgactatacc tattggcaca aatacggcac gcgcgactac cgcggcggcg
    16501 gcaggagctc cgcccgtgaa accgccgccc gcgttgctgc cggagccgtt gccaaaaaat
    16561 ggttgaaaga aaaattcggc acggaaatca ccgcctacgt tacccaagtc ggcgaaaaag
    16621 aaatccggtt tgaaggctgc gaacacattt cccaaaatcc tttttttgcc gccaaccata
    16681 gccaaattgc cgagctggaa aactatatgg acggcgtgcg caaatccttg gattccgtcg
    16741 gcgcgaagct gcatatcgaa gcagccaatg tccctgtcgg cttgggcgaa cctgtttttg
    16801 accgcctcga tgccgaaatc gcctacgcga tgatgggcat caacgccgtc aaaggcgtgg
    16861 aaatcggcgc aggttttgac agcgtaacgc aacgcggcag cgaacacggc gacgaactga
    16921 ccccgcaagg cttcctgtcc aaccactcag gcggcatcct cggcggcatc agcaccgggc
    16981 aagacatccg cgtcaatatc gccatcaaac ccaccagctc catcgccacc ccgcgccgca
    17041 gtatcgacat caacggcaac cccatcgaac tcgccacgca cggcaggcac gacccctgcg
    17101 tcggactgcg ctccgcgccg atcgccgaag ccatgctcgc gttagtcctc atcgaccacg
    17161 ccctgcgcca tcgcgcgcaa aatgccgacg ttcaggttaa tacgcccgac attacccttt
    17221 caaacaaata aaaatttagc caaaacacag actttataat agaatatcga gcattgccgt
    17281 gcagccttga cgcacgggtt tgtttagagg aatacaaccg aaatgacaca agaaaccgct
    17341 ttgggcgcgg cactaaaatc cgccgtccaa actatgagca aaaagaaaca gaccgaaatg
    17401 atcgccgacc acatctacgg caaatacgat gtgttcaaac gcttcaaacc gttggcgctc
    17461 ggcatcgatc aggatttgat tgccgctttg ccgcaatacg atgccgcact gattgcacgc
    17521 gtcctcgcca accactgccg ccgtccgcgc tatctgaaag ccttggcgcg cggcggcaaa
    17581 cgtttcgatt tgaacaaccg tttcaaaggc gaagttaccc ccgaagaaca ggcgatcgcg
    17641 caaaaccatc cttttgtgca gcaggctttg caacagcagt ccgcccaagc tgccgccgaa
    17701 acgctgtctg ttgaagccga agcagccgaa tcttccgcag cagaataaat ccccaaacga
    17761 aatgccgtct gaaaaccgat ttggtttcag acggcatttt ttcgtatgcg gcaatcacgg
    17821 ttcaaatatc gagttccgcc gtatcgcctt cgcgttccat ccaggcacgg cgggcggcgg
    17881 cttcgccttt gcccatcagt ttgacgaaga tgtcgcgcgt ctcgtcatcc gcgccttctg
    17941 ggatttgtac ctgcaacagg cggcgggtgt cggggtgcat ggtagtatct ttgagctggt
    18001 ctgggttcat ctcacccaag cctttgaaac ggctgatgga ataagcagtt tctttaacgc
    18061 cttctttttg cagccgctct aaaatgccgt caagttcgtt ttggtcgagg gcgtagaatt
    18121 tgcgggcggg tttgctttta ccttgtgcgt tgacatctac gcggaacagc ggcggctggg
    18181 cgacgtagat gtgtccgtca gcgaccagtt tcgggaagtg gcggtagaac agggtcagca
    18241 gcaaaacttg aatatgcgag ccgtccacgt cggcatcgga caggatggcg attttgccgt
    18301 aacgcaggcc gcttaaatcg ggatggtcgt tgatgccgtg cggatcgacg ccgatggcaa
    18361 ctgaaatgtc gtggatttcg gcgttgccga agagctggtc ggggtggact tcaaagctgt
    18421 tgagcacttt gccgcgcagg ggcaggatgg cctgggtggc tttgtcgcgg gcgagtttgg
    18481 ctgagccgcc ggcggaatcg ccttcgacaa ggaagagttc gttttcgcgg atgtcttcgc
    18541 tttcgcagtc ggtcagcttg ccgggcagga cggcgacgcc gctgcctttt ttcttttcga
    18601 ttttcttaac cgaacgcatc cgcgcctgcg cctgacggat ggcgagttcg gcaatttttt
    18661 taccgaagtc cacgttttgg ttcagccaca attccaaagg gtcgcccgct acagcggcga
    18721 caagtttcag cgcgtcgcgg ttggtcagct tgtctttggt ctgaccttgg aactgcgggt
    18781 cgaggacacg ggcagagagg acaaaggcgg ttttgccgaa cacgtcgtcg ctttgtactt
    18841 tcacgccgcg cggcaagagg ttgtgcagat tgatgaaatt gttgacggcg ttgaacacgg
    18901 cttgtttcaa gcctgcttca tgcgtgccgc ccaaaggggt ggggatgagg ttgacatagc
    18961 tttcgttggc acacgagcct tcttccagcc aagtcagggc aaacgccgct ccttcgccga
    19021 tgctgaaatc gccgttgtgt tcgtctgaaa tgtagttttc gcaagagaac agcggcacag
    19081 cttcttgcgc gtcggcaatc aggtcggtca gatagctttt caggccgtcg gggtagtgcc
    19141 aggtttgggt gtgcgcttcg tcttcgcctt tgaccggacg ggtcagggaa acgcgcacac
    19201 ccggcagcag cacggctttg gcacgcagca ggcgttcgag ttcgggaatg ctgtaattcg
    19261 ggctttcaaa atatttgccg tccggccaga cgcgcacttc ggtgccgctg tctttgacgg
    19321 cgcatttgcc cacttgtgcc aacggttcga ccacgtcgcc gccggcaaac acgatacggt
    19381 ggattttgcc ttcacgtttg accgttacct caaggcgggt ggagagggcg ttggtgacgg
    19441 atacgcccac gccgtgcagt ccgcctgaaa aggcatacgc gctgccgccg tcttttttgt
    19501 tgaacttgcc gcccgcgtgc agacgggtga acacgagttc gactacgggt acgccttctt
    19561 cagggtgcag gccgacggga ataccgcggc cgttatcacg gacggaaagc gaaccgtctt
    19621 catgaatttg cacgtcgatt gcagtcgcga aaccacccaa cgcctcgtcc gccgcattat
    19681 caatcacttc ctgacagatg tgggtcgggc tgtcggtgcg ggtgtacatg ccgggacgtt
    19741 ctttgaccgg ctccaagcct ttgaggacgg tgatgctgga ttcgctgtat tggttgtttt
    19801 tagccatagg aataatctga aagtaagaaa aacaacgctt tcagacggcc tgaaagcgtt
    19861 gcgttccgtt gttttagcgg ttgtcggaag attggcgggc ggcaaagtct tcataacttt
    19921 ccataccgcg caggaagcgg gaagagagtt ctttcaacgc ccccaaataa acgtcgcgtt
    19981 tgaaatcaat cacttcgtca acgggcgccc aatattgatg ccaacgccag ccgtcaaatt
    20041 cggggtggcg ggtggcgcgc aggttgacat cgcaatctcg gccggtcagg cgcaggagat
    20101 accaaatctg cttctgcccg cgataggatc cgcgccattc gcggcgtacc cagttgttcg
    20161 gcacgtcata acgcagccag tcgcgcgtgc ggccgataat tttgacgtgt tgcggcaaaa
    20221 gcccgacttc ttcgtacaac tcgcggtaca tggcggtttc ggggctttcg cccggcttga
    20281 tgccgccttg cggaaactgc caagaatgtt cgcgcacgcg cttgccccaa aagacttcgt
    20341 cgcggttgtt gattaagatg ataccgacat tggggcgata gccttccctg tccaacacgg
    20401 tgtcgccctc cgttaaattc aatcttggga ttttcccaca aatcggacgg ttttgacaaa
    20461 tcggacgata gggttcaggc atgtcgaaac acagacggat tcgggaaaat atcttaaatt
    20521 tggtttacaa taatacgttt caaattaatt cgggaatcag accatgttag atatccaatt
    20581 gctccgcagc aacaccgccg ctgtggcgga acgcttggcg gcacgcggtt acaagtttga
    20641 tgccgcgcgt ttcaatgcgc tggaagagca gcgaaaagcc gtccaggtga aaaccgaaga
    20701 gctgcaagcc tcgcgcaaca gcatttccaa acaaatcggc gcactgaaag gtcagggcaa
    20761 acatgaagag gcgcaggcgg ccatggatca agtcgcccaa atcaaaaccg atttggaaca
    20821 ggcagccgcc gatttggaag ccgtgcaaaa ggaactggac gcatggctgt tgagcattcc
    20881 gaacctgccg catgaggacg tgcctttcgg taaggatgaa accgaaaacg tcgaagtccg
    20941 caaagtcggc acgccacgcg aatttgactt tgaaatcaaa gaccatgtcg atttgggcga
    21001 acctttgggt ttggatttcg aaggtggcgc gaaactttcc ggcgcacgat ttaccgtgat
    21061 gcgcggacaa atcgcccgcc tgcaccgcgc gctggcgcaa ttcatgctcg atacgcacac
    21121 gctgaaacac ggctacaccg agcattacac accctatatc gtggacgaca ccaccttgca
    21181 aggcacgggt cagctgccga agtttgcaga agatttgttc cacgttaccc gtggcggcga
    21241 cgagagcaaa accacgcaat atctgattcc gacagctgaa gttaccctga ccaataccgt
    21301 tgccggcagc attatcccgt ccgaacaact gccgctgaag ctgaccgcgc attcgccctg
    21361 tttccgcagc gaggcgggtt cgtacggcaa agacacgcgc ggtctgattc gccagcacca
    21421 gttcgacaaa gtggaaatgg ttcaaatcgt tcatcccgaa aaatcatacg aaacgctgga
    21481 agaaatggtc ggccatgccg aaaacatcct gaaggctttg gaactgccct accgcgtgat
    21541 taccctgtgt accggcgaca tgggcttcgg cgcaaccaaa acgtatgact tggaagtttg
    21601 ggtaccggcg caaaacacct accgcgaaat ctcaagctgc tccaactgcg aagatttcca
    21661 agcccgccgc atgaaggcgc gtttcaaaga cgaaaacggc aaaaaccgct tggtacatac
    21721 tttgaacggc tccggcttgg ctgtcggcag aacgctggtc gccgtattgg aaaaccatca
    21781 aaacgccgac ggcagcatca acatccctgc cgcactgcaa ccgtatatgg gcggcgttgc
    21841 caagttggaa gtgaaataag tttgcaagct gcctgaacgt caaatgccgt ctgaaacctg
    21901 gttcagacgg catttccttt aaacttttaa aacacatcaa ccgtcggcac gaaccgcatt
    21961 gccgcaatcg ccggtctgtc cgacctcgcg gatattggac agcgtaactt ccgaaatatt
    22021 acccaacgcc tcttccgtca aaaatgcctg atggccggta aacagcacat tatgacaaga
    22081 cgacaggcgg cggaacacgt cgtcggtaat cacatcgttg gatttgtctt caaaaaacaa
    22141 ttcgcgttcg ttctcgtaca cgtccatacc caatgcgccg attttccggc gtttcaacgc
    22201 ctcaatcgcg gcagaactgt caatcagacc gccacggctg gtgttgataa tcatcacgcc
    22261 gtctttcatt ttgtcgaacg ccgcttcgtt cagcatatag tggttttccg gcgtggaggg
    22321 gcaatgcagc gtgatgatgt ccgaccgggc atacagctcg ttcaactcca catacctgcc
    22381 gccgattttt tccgcttcgg ggttgcaaaa cggatcgtaa gccagcaggt tcatgccgaa
    22441 accctttaaa atccgcatgg ttgcaatacc gattttcccc gtgccgataa cgcccgccgt
    22501 tttgccgtac atattgaaac cggtcagacc ttccagcgaa aaattcgcat cgcgggtacg
    22561 ctgataggct ttgtggatac ggcggttcaa cgtcagcatc agaccgaccg tatgttccgc
    22621 aaccgattcg ggcgaatagg caggcacgcg cacgactttc aagcccaact cttcagccgc
    22681 ctttaaatcc acattattga agccggcaca acgcaacgcc acagttttca cgccaatttg
    22741 cgccaatttt tccaacacgg gccggctgcc gtcgtcgttt acaaaaatac agaccgcttc
    22801 cgcgccttcc gccattttcg ccgttttcgc atccagcata aaatcaaaaa actccagctc
    22861 gaagccgaaa tgccggttgg cgcgggtaaa atgttcgcgg tcatagcttt tcgtaccgta
    22921 aatcgcaatc ttcatcaata tgtccagttg tcgcctatgg ttgagaaacg gcataataca
    22981 ctgaattcaa acaaatcagt agaatatggc agattaaaat tgattgcata cacggcattt
    23041 ccatttcaaa acacaaaact caatcgccca ttgccgccag aagctccgcc tgatgctcgg
    23101 caatcagggc attggtgatt tctgccaagt cgccgtccat cacaaaatcc agcttgtgca
    23161 gggtaaggtt gatgcggtgg tcggttaccc tgccttgggg atagttgtag gtgcggatgc
    23221 gttcgctgcg gtcgccgctg ccgatgaggg atttgcgctc ggcggcttct ttggcttggg
    23281 cttcgcgttt ttgcgcgtcg ttcaggcggg cggcgaggac tttcattgcc tgcgctttgt
    23341 tggcatgttg gctgcggccg tcttggcatt cgaccaccat gccggtgggc aggtgggtga
    23401 tgcggacggc ggagtcggtt ttgttgatgt gctgaccgcc cgcgccggat gcgcggaagg
    23461 tgtcgatgcg caggtcggct gggttcagtt cgatgtcttc cagttcgtcc gcttcgggca
    23521 tgacggcaac ggtgcaggcg gaggtgtgga tgcggccttg gctttcggtg gcggggacgc
    23581 gctgcacgcg gtgtccgccc gattcaaatt tcaaacggct gtacgccccg agtccgacaa
    23641 tacgggcgat gacttcttta tagccgccca attcgctttc gttggcggac acgatttcaa
    23701 cctgccaacg gttgcgctcg gcgtagcggc tgtacatacg cagcaaatcg ccggcaaaca
    23761 gcgcggcttc gtcgccgccc gttccggcgc gtatttcgat gaagatgttt ttgtcgtcgt
    23821 cggcatcttt gggcagcagc agtttttgca gttcggtatc gagcgtgttg attttggctt
    23881 ttgccgcttc gatttcttcg gcggcaaaat ctttcatttc ggggtcggac aacatttctt
    23941 cggcatccgc caagtcgctt tgggcaagcc gatagttttg gaacacttcg acgacggggg
    24001 tcagttcggc gtgttcgcgc gtgagcttgc ggtagttgtc catatctgcc gtggcttcgg
    24061 gttgccctaa aaggtgggta acttcttcca accggtcgcc gagttgttgc agtttttcta
    24121 agatagacgg cttcataatt cttccataac aaacgccgcc tgaatttcag acggcatcaa
    24181 aacgcggtca ttataatata ttttctgaat attcaaaaag ataatctagg gacggagcag
    24241 gctgtcggca ttgcgttccg ttatcgcggc gatgtccgcc acgccgacac cgcgtatctg
    24301 cgcggcaatt tcggcaatcc aaagaatatt ggcaggcgta ttaatctctt ttttcagcat
    24361 aaacgggctg tcggtttcca atacgaaatc cccgtcgttc aaggctttaa gcgtatcgcg
    24421 cactttacgc gcgttcggat tgagcaacaa cgaaccgatg ccgattttga aacccagttt
    24481 cgtcaacacg cgcgcttctt ccgcgctgcc tgagaaggcg tgaacgatgc cgccttgggc
    24541 aaagcctgtc tgtttgacgg cggcggcgat gtcggcggtg gctttgagat tatggataat
    24601 cacgcggcgg cgcagggttt gcgcgatggc aagctggcgg acgaaaactt ggatttgccg
    24661 ttcgcgctgc ggcggcgttt gggttttgtc gtaaaaatcc aaaccgattt cgccgaccca
    24721 tgcctgcgga taacgtgcca acatcgcttc caggcggacg caatcacgct cggcaatgcc
    24781 gtctgaaaac caaggatgga tgccgagcgc aatacggatt tgaccgtgtt cggacggcat
    24841 ttccgacagt tccgccacgc tttgccaatc ctgcgggcgc gtcgcgggaa cgataaaccg
    24901 ccacacaccc gcctgtcgcg cttcggcaag cacctgcgcc agattgccgc gcaaaacaga
    24961 atcggcaaga tggcaatgtg tgtcggtcag cctcatcttc acaccagccc caaccgctgc
    25021 aactcgtgtt tcacctcgtc cgcgccccat ccttcagaaa cggcaagcgt catcaatgcg
    25081 gttgcggttt ccaaattgca tttgccgccg ttgatgatgc ctgagttgcg gaacgcgttg
    25141 ccttgcgcgt aaacggcagc ggttctgcct tgtcggactt ggctgatgtt gagcagcagt
    25201 ttgccttgct gcgtaaagtc ttgcacggcg cggatgaaac cttcgtctgc gggcgtgttg
    25261 ccgtgtccgt aactttgcag gataagggcg tgggcgggaa gctgtccgag tccgtcggca
    25321 agttcttgga cggcaaagcc ggggataagc gtgcggacgg cgatttttgc ctgcgggtcg
    25381 ggataacgga ttttgaggcc gtctgaaaca tctgccgcgt cctgattcgg gatgcggaca
    25441 ttgtgccagc cctgggtttc gtcccactcc gccagtgcgc cgaaatgcgg attgtcgaaa
    25501 ccggcggcgg tttcggtgct gactttgctg ctgccgacgg cgggataaag tttgccgtca
    25561 aaggcaataa gcgtctgctt caatccgagt gggaatgcgg caacggcagt cgccagattg
    25621 cgcggcgcgt cgctgcccac ggcgttgtac ggccattggg agccggtcag gacgattggc
    25681 ttgtccaaac cctgcagggc gagggcgaac agattggcgg tataggcgag cgtgtccgtg
    25741 ccgtgcagca ccaaaacgcc gtcgtactgc ggcagcgcgg cggcaatgat gtccagccaa
    25801 gcgcaccagt tttgcagttg gacggcggaa gaatcaatca gcgtcccaca aacgtgccaa
    25861 tcgaaatcca tgccgtttga aaacggcgcg agtgcctgcc cgaccagcgc ggtatcgggg
    25921 cgcaggcctt cgctgctttg cgtcatgccg atggtgccgc cggtataaag gacaaaaatt
    25981 ttctgtttca tggctcatcc tgaaaatgca aagaccgcct gaaacgcgaa atgcgtccgg
    26041 acggtcgaaa atctgattta ctgctgcttc tgtgccgctt ttttcgctgc cttttccgcc
    26101 ttgcgtttgg cgcgtttttc gctcaattgt gcgcggtaaa gctgataatg tcggcgtttg
    26161 cgccaccaga accacgccag cgccgccgcc agcacgccca atgcgatgaa gatgccggat
    26221 tgcaggctgt gcattttcgc catcagccaa tcgatgttgt gcgcgccgta ctcgcccaag
    26281 taaatccaaa cgggcacgga aatcagcgcg gcaagcccgt ccataatcag aaagcgcaga
    26341 tacgatactt tgcggctgat gccggcggta acgaaaacgg cagtccgcaa acccggcagg
    26401 aagcgggcga caaacagaac ccagttgccg tatttgtcga atttttcctg aacctgtgcg
    26461 taacgtttcg gcgtcatgat gcgcgcaatc ggtttgaact tgaggatttt ctgcccccag
    26521 atgcgtccgg cggcgaacat gatgccgtcc ccgaccaata cgccgagcat accgactgca
    26581 aacataatat gcggattggt ataacccata cccgaaatca cgccgcctgt taccaaggtc
    26641 aaatcctcgg gaatcggcac gccgaaaccg cagatgacca aaacgaaaaa cacggccgcg
    26701 tagccgtatt cgacaaaaaa ggcttccaaa agggcaaaca tagcggatat tccattgtcg
    26761 gagataaaaa gtcagaacaa gccgaaacat tttctgcgcg aaacggcatt ctatcaaaga
    26821 ttatgccgtc tgaaagcggc agggggcaga ttcgcgccct ctgccggacg ttcagacggc
    26881 atttaaacag gaaaaccgcc gctgttgaaa cggttttgcc tgattttgcc taaaggctgc
    26941 cgatggcgga agcaatacgt tccgcaccgt cgcgcgccca atccgcctgc cgcgcctcca
    27001 ccatcacgcg cacgacgggt tcggttcccg aagcgcgcaa cacgacacgc cctttgcctt
    27061 cgagttcttt ttccacttcc gccaacacgt cttttgaggc ttcctgccag ttttgccctt
    27121 tgccgatacg gacattaatc atcgtttgcg gatacggctg ccagtcggcg caaacggcgg
    27181 caaggtcttg gttcagcgtt tgcaatgccg ccaaaacctg caaggcggaa ataatgccgt
    27241 cgccggtgtt gtgtttgtcc atgcacaaaa tatggccgct ggcttcgccg ccgacgagcc
    27301 agccgcgttg gttcagctgt tccaacacat agcggtcgcc gactttggcg cggcagaaat
    27361 ccacgccctg ctctttcagg gcgatttcca tcgccatatt ggtcatgacc gtgccgacca
    27421 cgccgccgat gttgatacct tctcgggcgc gggctttagc aatgacgtaa atcaggctgt
    27481 cgccgtcgta aaccttaccg tttttatcga ccatcatcag gcggtcgccg tcgccgtcta
    27541 aggcgatgcc gtagtcggct tcatgctgta aaacggcggc ctggagtgtc ttggtataag
    27601 tcgcaccgca tttttcgttg atgttgtagc cgttgggttc gtcgccgatg ctgacgacct
    27661 gtgcacccag ttcgtgaaac accttgggtg cgacaccgta ccccgcgccg ttggcggtat
    27721 cgataaccaa cttcaaacca cgaaggtcgg aatggctggg aaaggtggat ttgcaaaatt
    27781 cgatatagcg gtcgtccgca ccgctgatac ggcgtgcgcg cccgaggcgt gcagaaggct
    27841 gggttttcat ttcttcgtcg attttggctt cgatttccaa ctcgatttca tcggaaagct
    27901 tcacgccacc ctcggcaaag aatttgatgc cgttgtcgga ataggcatta tgcgacgcgg
    27961 aaatcatcac accggcggac aaacgcagcg cacgggtcag ataagccacg ccgggcgtag
    28021 gcagcggacc ggtttggata acgttgacac ctgcggcggt aaaacctgcc accaaagcgg
    28081 cttccagcat ataaccggaa atacgcgtat ccttgccgat taaaacggtc ggtttctggt
    28141 cagtgtcgtg ctgaaccaaa acctgccccg ccgcatagcc gagtttcaat acaaaatcgg
    28201 gcgtaatcgg aaactgcccg acttcgccgc gcacgccgtc cgtgccgaaa tatttttttg
    28261 ccatgtgttg ctccgagaat gtgaaccgtt gtccgagatt atacagtctg tttgtgccct
    28321 gctgtctgca ccgttgatgc cgtctgaagc cgccccgtcc ttttcagacg gcatgaagta
    28381 tgcgaaccgc tgtttacaga ttgatgccca acgcttccca caccttcaac gcgtccgccg
    28441 tcgccttcac gtcatgcacc cgcacaattt gcgcgccgcg cgccacagcc gccacagccg
    28501 ccgccacgct gccgtgtacg cgcgccgccg cgtctgcctc gccagtcagc tcgcctatca
    28561 tacgtttgcg cgacacgccg atgagcagcg gaaaacccgt ttccgccatc aattcgggta
    28621 aatgccgcat cagtgcgata ttgtgttgta aggttttgcc gaaaccgaaa ccggggtcga
    28681 gtgtgatgcg ttgcggggcg atgcctgccg cgatgcattc cgccgcccgc gctttcaaat
    28741 accgcgccac ttcaccaaca acatcctgat atttcggatt aatctgcatg gtttcaggca
    28801 aaccctgcat atgcatcagg caaatacccg tgtccgtctg gcgcgccagc aattcgaccg
    28861 cgccttcgtc ggtcaacgcc gccacatcgt taataatatc gatgccgccg agtgccaacg
    28921 ctttttccat aaccaccgtg cggcgcgtgt ccaaactgac gggaacgccc catcccgcga
    28981 cttctaccaa tacaggctca acccgcgccc attcttcttc ggacgaaaca taatccgcac
    29041 ccggccgcgt cgattcgccg ccaatgtcga gaatgtccgc accctctttc aaaagccgtt
    29101 cggcgtgcgc caaagcggtt ttggcatttt gcgaatacgc gccgccgtcg gaaaaagaat
    29161 caggcgtgag attcacgatg cccataattt tcggcttgtc caaaccgatt tcaaaccgtc
    29221 ctgcctgcca accgtgtcgt gccatctgaa ctcctcccaa aataaaaaaa cag
//
LOCUS       DBBZXW010000014        27739 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.014, whole genome shotgun sequence.
ACCESSION   DBBZXW010000014 DBBZXW010000000
VERSION     DBBZXW010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27739
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.014"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            169..792
                     /gene="lolA"
                     /locus_tag="ACJJD2_000562"
     CDS             169..792
                     /gene="lolA"
                     /locus_tag="ACJJD2_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HGG7579158.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1065..2204
                     /locus_tag="ACJJD2_000563"
     CDS             1065..2204
                     /locus_tag="ACJJD2_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7579159.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAGQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTQQVKKAL
                     GTDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2336..2647
                     /locus_tag="ACJJD2_000564"
     CDS             2336..2647
                     /locus_tag="ACJJD2_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7579160.1"
                     /translation="MDLSIVVPIYNVESYLEACLNSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKTTNNKQQTTNNKQQTTNNKQQTTPDTEHQTSNIYIRITKGRQKLGIP
                     E"
     gene            2599..2733
                     /locus_tag="ACJJD2_000565"
                     /pseudo
     CDS             2599..2733
                     /locus_tag="ACJJD2_000565"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
     gene            2743..3378
                     /locus_tag="ACJJD2_000566"
     CDS             2743..3378
                     /locus_tag="ACJJD2_000566"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HGG7579161.1"
                     /translation="MPDVVFLNAVKYDKGSVSHFGEDYQPEKILKQSKVEVLKGLCRF
                     RKFPGSACNKIIKRELIIKEKLFFEKEVYAEDIEWSMRLFNAATTFSYLDGCYYYYRQ
                     GRKDSKTGTVSEKSIKSLLYILEKNAEMEFDRDISSYLYSFLSYEYLVLLFIMTSKNI
                     ECDADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            3419..3949
                     /locus_tag="ACJJD2_000567"
     CDS             3419..3949
                     /locus_tag="ACJJD2_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HGG7579162.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLEGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(3983..4099)
                     /locus_tag="ACJJD2_000568"
     CDS             complement(3983..4099)
                     /locus_tag="ACJJD2_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HGG7579163.1"
                     /translation="MPSEPEKRLSDGIFACNSNADGQNQGASDTVIGCVPSA"
     gene            complement(4314..5909)
                     /locus_tag="ACJJD2_000569"
     CDS             complement(4314..5909)
                     /locus_tag="ACJJD2_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HGG7579164.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVKPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(6016..6411)
                     /gene="hisI"
                     /locus_tag="ACJJD2_000570"
     CDS             complement(6016..6411)
                     /gene="hisI"
                     /locus_tag="ACJJD2_000570"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HGG7579165.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(6442..7209)
                     /gene="hisF"
                     /locus_tag="ACJJD2_000571"
     CDS             complement(6442..7209)
                     /gene="hisF"
                     /locus_tag="ACJJD2_000571"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HGG7579166.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(7222..7959)
                     /gene="hisA"
                     /locus_tag="ACJJD2_000572"
     CDS             complement(7222..7959)
                     /gene="hisA"
                     /locus_tag="ACJJD2_000572"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HGG7579167.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQTVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(7992..8630)
                     /gene="hisH"
                     /locus_tag="ACJJD2_000573"
     CDS             complement(7992..8630)
                     /gene="hisH"
                     /locus_tag="ACJJD2_000573"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HGG7579168.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVWTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCIAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDRQGCRLKVPHMGWNTVRQTQNHPLFKDIPQNTRFYFVHSYY
                     FDPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(8761..10263)
                     /gene="pta"
                     /locus_tag="ACJJD2_000574"
     CDS             complement(8761..10263)
                     /gene="pta"
                     /locus_tag="ACJJD2_000574"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HGG7579169.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(10448..11506)
                     /gene="fbpC"
                     /locus_tag="ACJJD2_000575"
     CDS             complement(10448..11506)
                     /gene="fbpC"
                     /locus_tag="ACJJD2_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HGG7579170.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(11527..13044)
                     /gene="fbpB"
                     /locus_tag="ACJJD2_000576"
     CDS             complement(11527..13044)
                     /gene="fbpB"
                     /locus_tag="ACJJD2_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HGG7579171.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(13112..14107)
                     /gene="fbpA"
                     /locus_tag="ACJJD2_000577"
     CDS             complement(13112..14107)
                     /gene="fbpA"
                     /locus_tag="ACJJD2_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HGG7579172.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(14358..14828)
                     /locus_tag="ACJJD2_000578"
     CDS             complement(14358..14828)
                     /locus_tag="ACJJD2_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HGG7579173.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RTEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAIHSAMLIHRAADALRKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(14885..16261)
                     /gene="argH"
                     /locus_tag="ACJJD2_000579"
     CDS             complement(14885..16261)
                     /gene="argH"
                     /locus_tag="ACJJD2_000579"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HGG7579174.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQSLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAVEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(16280..17149)
                     /gene="galU"
                     /locus_tag="ACJJD2_000580"
     CDS             complement(16280..17149)
                     /gene="galU"
                     /locus_tag="ACJJD2_000580"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HGG7579175.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(17177..17776)
                     /gene="rdgB"
                     /locus_tag="ACJJD2_000581"
     CDS             complement(17177..17776)
                     /gene="rdgB"
                     /locus_tag="ACJJD2_000581"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HGG7579176.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAEYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELAGKTDKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALADLIRKLAL"
     gene            complement(17769..18002)
                     /locus_tag="ACJJD2_000582"
     CDS             complement(17769..18002)
                     /locus_tag="ACJJD2_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HGG7579177.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(18110..18643)
                     /locus_tag="ACJJD2_000583"
     CDS             complement(18110..18643)
                     /locus_tag="ACJJD2_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HGG7579178.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(18745..19203)
                     /gene="nudB"
                     /locus_tag="ACJJD2_000584"
     CDS             complement(18745..19203)
                     /gene="nudB"
                     /locus_tag="ACJJD2_000584"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HGG7579179.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            19414..19490
                     /locus_tag="ACJJD2_000585"
     tRNA            19414..19490
                     /locus_tag="ACJJD2_000585"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19448..19450,aa:Pro,seq:ggg)
     gene            19648..21474
                     /gene="mafB"
                     /locus_tag="ACJJD2_000586"
     CDS             19648..21474
                     /gene="mafB"
                     /locus_tag="ACJJD2_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HGG7579180.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLFIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSNNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNKNSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            21477..21941
                     /locus_tag="ACJJD2_000587"
     CDS             21477..21941
                     /locus_tag="ACJJD2_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579181.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            22166..22312
                     /locus_tag="ACJJD2_000588"
     CDS             22166..22312
                     /locus_tag="ACJJD2_000588"
                     /inference="COORDINATES: protein motif:HMM:NF012755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579182.1"
                     /translation="MWYEANIGLINTMSRSNQAGTRLLYSNYGLLYITTDHYISATRF
                     VAWK"
     gene            22324..22611
                     /locus_tag="ACJJD2_000589"
     CDS             22324..22611
                     /locus_tag="ACJJD2_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HGG7579183.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            23125..24363
                     /locus_tag="ACJJD2_000590"
     CDS             23125..24363
                     /locus_tag="ACJJD2_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HGG7579184.1"
                     /translation="MIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEALKKDKQ
                     TARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKESLYYLN
                     KHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGSCAETFG
                     LGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEYVQFSID
                     LFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAH
                     AQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVE
                     IKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSK
                     SGIKIEGFTEPNRTAYPIYE"
     gene            24394..24813
                     /locus_tag="ACJJD2_000591"
     CDS             24394..24813
                     /locus_tag="ACJJD2_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579185.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            24850..25824
                     /gene="mafB"
                     /locus_tag="ACJJD2_000592"
                     /pseudo
     CDS             24850..25824
                     /gene="mafB"
                     /locus_tag="ACJJD2_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
     gene            25835..26296
                     /locus_tag="ACJJD2_000593"
     CDS             25835..26296
                     /locus_tag="ACJJD2_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579186.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            26283..26570
                     /locus_tag="ACJJD2_000594"
                     /pseudo
     CDS             26283..26570
                     /locus_tag="ACJJD2_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229180.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
     gene            26597..27016
                     /gene="mafI"
                     /locus_tag="ACJJD2_000595"
     CDS             26597..27016
                     /gene="mafI"
                     /locus_tag="ACJJD2_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MafI"
                     /protein_id="HGG7579187.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            27106..27177
                     /locus_tag="ACJJD2_000596"
                     /pseudo
     CDS             27106..27177
                     /locus_tag="ACJJD2_000596"
                     /inference="COORDINATES: protein motif:HMM:NF026862.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin type 17 domain-containing
                     protein"
     gene            27174..27416
                     /gene="imm31"
                     /locus_tag="ACJJD2_000597"
     CDS             27174..27416
                     /gene="imm31"
                     /locus_tag="ACJJD2_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm31 family immunity protein"
                     /protein_id="HGG7579188.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            27494..27739
                     /locus_tag="ACJJD2_000598"
     CDS             27494..27739
                     /locus_tag="ACJJD2_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7579189.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
BASE COUNT         6953 a         6328 c         7658 g         6800 t
ORIGIN      
        1 cggcacacat taaagggcag cgtggcgcgc ctgccttttc cgagcggtca aaaaaatcag
       61 ccctcggaaa acgctgtttg taaaatgcaa accgcccgta acgccgcccg tatgattgtt
      121 ttgccgcgcc gatactttac gccacaccca tcccaacaag gaaaaataat gatgaaaccg
      181 cacaacctgt tccaatttct cgccgtttgc tccctgaccg tctccgtcgc ttccgcacag
      241 gcgggcgcgg tggacgcgct caagcaattc aacaacgatg ccgacggtat cagcggcagc
      301 ttcacccaaa ccgtccaaag caaaaagaaa acccaaaccg cgcacggcac gttcaaaatc
      361 ctgcgcccgg gcctcttcaa atgggaatac acttcgccct acaaacagac tattgtcggc
      421 gacggtcaaa ccgtttggct ctacgatgtc gatttggcac aagtgaccaa gtcgtcccaa
      481 gaccaggcca taggcggcag ccccgccgcc atcctgtcga acaaaaccgc cctcgaaagc
      541 agctacacgc tgaaagagga cggttcgtcc aacggcatcg attatgtgct ggcaacgccc
      601 aaacgcaaca atgccggcta ccaatacatc cgcatcggct tcaaaggcgg caacctcgcc
      661 gccatgcagc ttaaagacag cttcggcaac caaacctcca tcagtttcgg cggtttgaat
      721 accaatcccc aactctcgcg cggcgcgttc aagtttaccc cgcccaaagg cgtggacgtg
      781 ttgagcaact gatgccgtcc gcctcgatgc cgtctgaatg ccgccgaggc ttcagacggc
      841 attttcacgc aggcggaaca atgtcccgca ttaccgcccg atcgggcatc ggaacggcaa
      901 acccgtgaaa attaacggtt gcgccccggt tgtttttgcc gtttaatgca aaccttgctg
      961 caccaagggc caagaaagcc gaccggccgc ccccacagct tccgatgcag gcggcccgtc
     1021 cgtccctgca atgtttttta tttttgaacg aaaggtcgaa aaccatgaaa aaaacactgg
     1081 tggcggcggc gatcctgagc ctcgccttga ctgcgtgcgg cggcggaagc gataccgccg
     1141 cccaaacccc ctccgccaag cccgaagccg gacaatcggg caaactcaat atctacaact
     1201 ggtcggatta tgtcgatccc gaaaccgtcg ccgcctttga aaaagaaacc ggcatcaaga
     1261 cgcgttccga ttattacgac agcaacgaaa cactggaggc aaaagtcctg accggcaaat
     1321 ccggctacga cctgaccgcg ccgtccatcg ccaacgtcgg ccggcaaatc aaagcgggtg
     1381 cgtatcagaa aatcgacaag gcgcaaatcc cccattacgg caacatcgat aaagatttgc
     1441 tgaaaatgat ggaagccgtc gatccgggca acgaatatgc cgtgccttat ttctggggaa
     1501 tcaatacttt ggcaatcaat acccagcagg tgaaaaaggc attgggtacg gacaagctac
     1561 ccgaaaacga gtgggatttg gtgttcaaac ccgaatacac cgccaaactc aaatcctgcg
     1621 gcatcagcta tttcgacagc gcaatcgaac agattccctt ggcgttgcac tatttgggca
     1681 aagaccccaa cagtgaaaat cctgaagaca tcaaagccgc cgtcgatatg atgaaagccg
     1741 tccggggcga cgtgaaacgc ttcagctctt ccggctatat cgacgatatg gcggcgggca
     1801 acctgtgtgc cgccattggt tacggcggcg atttgaacat tgccaaaacc cgtgccgaag
     1861 aagccgcaaa cggcgtggaa atcaaagtat tgaccccgaa aaccggcgtg ggcgtgtggg
     1921 tggattcctt tatgattccg cgcgacgcgc aaaacgtcgc caacgcccac cgctatatcg
     1981 actacacgct ccggcccgag gtggcggcga aaaacggcag cttcgttacc tacgcgcccg
     2041 ccagccgtcc cgcgcgcgag ctgatggatg aaaaatacac ctccgacgca tcgattttcc
     2101 cgaacaaaga actgatggaa aaaagtttca tcgtatcgcc caaatccgca gaatccgcca
     2161 aactgggcgt gaagctgtgg caagggctca aggccggaaa ataaccgcaa cctctgccgt
     2221 ctgaaacctt tcgggcggca ggaaacggcg cgtccgttat caaacagggg gcgtttcccc
     2281 gcccgcctgt tatgattggg ttaagattaa aatgatttag taaaatgaga aagatatgga
     2341 tttaagtatc gtagttccca tttataatgt cgagagttat ttggaagcgt gtctaaattc
     2401 catagaacct atattaagta atgaaaatgt cgaacttatc cttgtgaatg acgggtcaaa
     2461 agacggaagt gaagatatat gttataaata tatagataaa acaacaaaca acaaacaaca
     2521 aacaacaaac aacaaacaac aaacaacaaa caacaaacaa caaacaacac cagataccga
     2581 acaccaaaca tcaaatatat atatcaggat aaccaaggga cggcagaagc taggaatacc
     2641 ggaataaaaa attcaaacgg aaaatatata gtctttattg attcggatga ttttattaat
     2701 tgtcaggtct tgctggattt tcttagtaaa gatgatattg atatgccgga tgtggttttt
     2761 ttaaatgcgg ttaaatatga taagggaagt gtttcacatt ttggcgaaga ttatcagcct
     2821 gaaaaaatac tcaagcaatc caaagtcgaa gttttgaaag gattatgccg atttagaaaa
     2881 tttccgggtt cggcgtgtaa taagattata aaaagggaat tgattatcaa agaaaaactg
     2941 ttttttgaaa aagaggttta tgccgaagat atcgaatggt caatgagatt atttaatgcg
     3001 gcaacaactt tttcttattt ggacggttgt tattactatt atcggcaggg aagaaaagat
     3061 tctaaaacag gaactgtttc ggaaaaaagt ataaagtcat tattatatat tttggagaaa
     3121 aatgcggaaa tggaatttga tagggatata tcaagttatc tttattcttt tctttcctac
     3181 gaatatctcg ttttgctttt tatcatgacg agtaaaaata tagagtgtga tgctgatata
     3241 aaaagaaggg cgtatcattt aaggtttatg ctgttaaagt ccaataaatt gatatataag
     3301 ctgatattcc cgataatcac attattcggg gtcgatatta caggcaggat tttaaaagca
     3361 atcaggggga atatttaata aatcctttaa cactatacat cttaccgaag gaggaaaaat
     3421 gaacgcaatc cgaactttcc aaaaccgcac gcccgaaatc cacgaaagct gtatgataga
     3481 cgaagcgtgc gtcgtcatcg gcgaagtgtc gcttgccgaa gacgtttccg tgtggccgtg
     3541 cgccgtgttg cgcggcgatg tgaacagcat caccgtcggc gcgcgcagca atatacagga
     3601 cggcagcgtc ctgcacgttt cccacaaaac cgccgccaaa cccgaagggt cgccgctggt
     3661 tatcggcgaa gacgttaccg tggggcacaa agtgatgctg cacggctgcc gtatcggcaa
     3721 ccgcgtcctg gtcggcatgg ggacgacggt tctggacgat gccgtgattg aggacgaagt
     3781 gatgatcggc gcgggcagcc tcgtgcctcc gcgcaaacgt ttggagggcg gctatcttta
     3841 tgtcggttcg ccggtcagac aagtgcgcgt gttgaccgat gaggaaaaag cctttttgaa
     3901 gtattccgcc gcgcattatg tgaagctgtc gaaacagtac gggatgtgaa atcacatcgg
     3961 cgttcttgcg tcagccccaa attcatgcgg atgggacgca tccgataacg gtatccgatg
     4021 cgccttgatt ttgaccgtct gcgtttgagt tgcaggcaaa aatgccgtct gaaagccttt
     4081 tttcgggttc agacggcatt ttatcgccta aagtttgacc gaatgttcgc gcgtttcgtg
     4141 gaacacgatg tccggccagc gttcttgcgt cagccctaaa ttcatgagga cgggatgccc
     4201 gataacggta tccgatgcgt cttgattttg atcggtgcat ttgagttgca ggcaaaaatg
     4261 ccgtctgaaa gccttttttc gggttcagac ggcattttat cgccgattgc tttttacagt
     4321 ttaaccgaat gttcgcgcgt ttcgtggaac acgatgtccg gccaacgttc ttgcgtcaac
     4381 cccaaattca cgcggttggg ggcgaggtag gcgaggttgc cgcccgcgtc gatggcgagg
     4441 ttgcccgcgt tggctttttc aaactccgcc agttttttct tgtcgtcgca cgatacccag
     4501 cgcgccgacc agatggatgc gctgtcgaac acggcttcta cgccgtattc gttggccagc
     4561 cgcgaggtaa cgacttcaaa ctgcaacacg ccgaccgcgc ccaaaatcaa atccgcgccg
     4621 ctcatcggtt tgaatacctg taccgcgcct tcttcgccaa gctgttgcaa acctttttgc
     4681 agttgcttga ttttcagcgg gtttttgatg cggacgctgc ggaacagttc gggcgcaaag
     4741 aatgggatgc cggtaaacgc cagttgttcg ccttcggaga agctgtcgcc gatttggatg
     4801 ttgccgtggt tcgggatgcc gatgatgtcg ccggcgtagg cttcttccac cagctcgcgg
     4861 tcgtgcgaca taaaggttac cacgctggag gcagcgattt cgcggttgat gcgcaggtgt
     4921 ttcatcttca taccgcgctc gaatttgccg gagcagacgc gcaagaaggc gatgcggtcg
     4981 cggtgtttcg gatccatatt ggcttggatt ttaaagataa atccggagaa tttcggctcg
     5041 tccggcttga ccatacgtac ggtcgcgtcg cgcggtttcg gcgcgggcgc ccagtcaatc
     5101 aatgaattga ggatttcctg aataccgaag ttgttaatcg cagagccgaa gaatacgggc
     5161 gtgagttcgc cggcgaggaa ttcgtcgaga ttaaactcgt tggaagccgc ctgcaccaat
     5221 tcgatttcgt cgcgcaactg ctggatttcc aatggaaagc gttgttccaa ttcgggattg
     5281 tcgatgcctt tgatgatgtc gaactcgtgc ggcagacgtt cgccaccggc ttcaaagaga
     5341 tagatttcgt cgttcaggat gtggtacacg cctttgaagt ttttgcccat gccgatcggc
     5401 caggttacgg gcgcgcagcg gatttgcagg atgttttcca cttcgtccag caactccaaa
     5461 gaatcgcgca cttcgcggtc gtatttgttc atgaacgtga caatcggcgt attgcgcagg
     5521 cggcagacgt tcaagagttt gatggtttgc gcttccacac cttttgccgc gtcgatgacc
     5581 atcaaggcgc tgtccacggc ggtcagaacg cggtaggtgt cttcggagaa gtcttggtgt
     5641 cccggcgtgt ccaagaggtt gacggtgtgg tctttgtagt cgaactgcat cacgcttgat
     5701 gccacggaaa tgccgcgctg cttctcgatg tccatccagt cggaggtggc gaatttgccg
     5761 gtttttttgc cttttaccgt acccgcgctc tgaatcgcgc ccgaaaacag caacagcttt
     5821 tcggtcagcg tggttttacc cgcgtcgggg tgggagatga tggcaaacgt gcggcggcgg
     5881 cgcacttggt cgaggatttc ttgggacatg gttttctttg caaaaaggtt caggccgctt
     5941 ttcagacggc ccggacagtg tttgagacgg cgaaattgta caaaaaaatg cctgataatt
     6001 caatgttgga ggcggtcagt gcgtgctgcc gtaaatctct ttttcgtctt tcaggacggc
     6061 atcggcggtt tcccacgcgc cgccgcgcca gactttgtaa aagcagcttt ctcgcccggt
     6121 gtggcaggcg atgccgccgt tttgggcgat gagcatcaca atggcgtcgc cgtcgcagtc
     6181 gaggcgcagt tcgcggactt tttgcgtgtg tcccgactct tcgcccttca tccattgttt
     6241 ttggcgcgaa cggctgtaat agtgggcaaa gccggtttcg acggtttttt gcagggcttc
     6301 ggcgttcatc cacgctacca ttaaaacacg tttggtttcg gcatcttggg cgatggcgca
     6361 aaccaaacct ttttcgtcaa atttgacggc ttcaagcagg tttttatcca tatttccttt
     6421 cagacggcat agtcggggcg gtcagaggcg cacttcgatg ccggcttcgc gcatagcgcg
     6481 tttggcttcg cggatggcga tttccccgaa atggaaaacg ccggcggcaa gtacggcatc
     6541 ggctttgcct tcggttatgc cttcaatcag gtgccggaca ttgccgaccc cgccggaggc
     6601 gatgacgggg atgtcgacgg cttcggcaac ggcgcgggtc agcggcaggt tgaaaccctg
     6661 tttcgtaccg tccctgtcca taccggtaag caggatttcg cccgcgccgc gtttttgcat
     6721 ttcgatcgcc cattccaccg catccaaacc ggtcggattg cgcccgccgt gggtaaagat
     6781 ttcccagcgt gtgttttcgg ggttgacggc tttggcatcg acggcggcga cgatggcttg
     6841 cgaaccgaaa aatccggcgg cttcgtcaat caggtcggga cgggtaacgg cggcggtgtt
     6901 gatgctgact ttgtccgcgc cggcattgag caggcggcgg atgtcggcaa cggtgcgtac
     6961 gccgccgccg acggtcagcg ggatgaagac ttgtccggca acttcttcga tgatgtgcag
     7021 gatggtatcc cggttgtcgg atgaggcggt gatgtcgagg aaggtcaatt cgtccgcgcc
     7081 ttcgccgttg tagcgtttgg cggcttcgac ggggtcgccc gcgtcgcgca aaccgatgaa
     7141 gttcacgcct ttgacgacgc gcccgtcttt tacgtcgaga caggggatga tgcgttttgc
     7201 cagtgccata atcggatgcc tttagtcgag ggaatctgcc agttgctgcg cttgggcaaa
     7261 atcgatgctg ccctcgtaaa tcgcgcggcc ggtaatcgcg cctgctacgc catgtttttc
     7321 ggcggcacac agggcgcgga tgtcgtccaa gccggtcagt ccgccggagg cgatgacggg
     7381 aatgcggacg gtttgggcga gtttgaccgt cgcgtcgatg ttcacgccgc tcatcatacc
     7441 gtcgcgcccg atgtcggtgt agatgatgct gttgacgccg tcgtcttcaa agcgttttgc
     7501 caaatcaatt acatgatgcc cggttacggt tgcccagccg tcgatggcgg ccataccgtc
     7561 tttggcatcc agcccgacaa taatcctgcc ggggaaggct ttgcacgcct cgcgcacgaa
     7621 gtcggggttt ttgaccgccg ccgtgccgat aatcacgtcg ttcagaccca aatccaaata
     7681 ttgtccgatg gttttcaaat cgcgtatgcc gccgccgagc tgtacgggga tgtctttggc
     7741 gacggcggca aggatgtctt tgatggcggg caggttttgc ggaacgccgg caaacgcgcc
     7801 gttcaaatct accagatgca ggcggcgcgc gccttgtttg aaccagtgca gtgcggtttc
     7861 ggcgggcgaa tcggaaaaga cggtcgcctc ttccatcagc ccttgtctca ggcggacgca
     7921 gcgtccttct ttcaaatcga tggcgggtat cagcagcata atttttctcc ttgtgcgggg
     7981 ccgtgtccgg cttaccagtt taaaaagttt ttcaacatcg tcagcccggc atcgtggctt
     8041 ttttcggtgt gaaattgcgt ggcgaatacg ttgtctttgc cgacgatgca ggcaaacggg
     8101 gacgggtagt cgctttcgcc caatatggtt tcgggatttt cggggtcgaa atagtagctg
     8161 tggacgaagt aaaaacgcgt gttttgggga atatctttaa acagcgggtg gttttgggtt
     8221 tggcgcacgg tgttccagcc catatgcggg actttcagac ggcatccctg ccggtcgcgg
     8281 aggtcgcgct caaagcgtct gactttgccg ccgaaccagc ccaagccgtc ggtgtttcct
     8341 tcttcactgt ggtcgaataa aagttgcgcg ccgacgcaga ttccgaaaaa gggtttgttt
     8401 tttaaggcat ctttgactgc ctcgtccaag ccgccgcgcg tcagtgccgc aatacagtcg
     8461 ggcatcgcgc cctgcccggg aaaaatgact ttgtcggcgc gggacacgcg ttcggggtcg
     8521 ccgcttaaaa agatttcggt attttttccg gcaagctgcc ccgccgtcca gacggatttc
     8581 aatacggaat gcaggttgcc cataccgtaa tcgataatgg cgatttgcat ggcttcctcc
     8641 tctttttttg caatatggct gcgattttaa caaacaaatg tgccgtgctg ataaaaatgc
     8701 cgtctgaaaa cgggagtctg tcttcagacg gcatagggtt taaacccgga aagccgtttg
     8761 tcagccttcc atttgttttg cctgaacggc agttagggcg atggtgaaca cgatgtcttc
     8821 caccagcgcg ccgcgcgaca ggtcgttgac cggtttgcgc aggccttgca gcagcgggcc
     8881 gacgcttaag acgttggcac tgcgttggac ggctttatag gtgcagttgc cggtgttcag
     8941 gtcggggaag accaaaacgg ttgcctgtcc tgccaccggg ctgcccggag ctttggattt
     9001 gcccacgccc ggcacggttg ccgcatcata ttgcagcggg ccgtcgatgg cgaggtcggg
     9061 gcgtttttcc cgggcaagtt tggttgcttc gatgacggta tcgacatcgg ggccgctgcc
     9121 ggagttgacg gtggagtagg aaatcatcgc cactttcggg tcgatgccga aggcttttgc
     9181 ggaatcggca gactggatgg cgatgtcggc aagctgttgc gcggtcgggt tcggattaac
     9241 cgcgcagtcg ccgaagacga ggacttggtt gggcagcagc ataaagaata cgctggacac
     9301 gaggcttgcg cccggtgcgg ttttaatcag ttgcaaagcg gggcggatgg tgttggcggt
     9361 ggtgtgaacc gcaccggata ccaaaccgtc cacatcattt tgcgccatca tcatcgtacc
     9421 gagtaccacg gtgtcttgca gttgcttgcg cgcgtcttcg ggtgtcaggc ctttggattt
     9481 gcgcagttcg cacatcggtc cgacgtattg ttcgaccaat gaggcgggat cgatgatttc
     9541 caaagagtcg ggcaggctga tgccgcgttc tttggcaacg gcttcgactt cttcgcgttt
     9601 ggcaagcagg acgcagcggg caatgccttt ttcgtggcag atggcggcgg cttggacggt
     9661 gcggggttct gcgccctcag gcaggacgat gcgtttgtcg gcttggcggg cgaagtcgat
     9721 caggttgtag cggaattgcg ccggcgacag gcgttttgct tcgcggcctg ccaatacgga
     9781 tacgtctttc agcgcgtcgc tcgaaccgaa gaaggtcagg ccggtttttt cggctgccgc
     9841 ttcggcaacg gaggctgccg cgccgtccac gacaaaacct tccaatacgc ccggcgcggc
     9901 ggcgaagaac tgtttggcaa ggttcagccg atttgccagt tcgtcggcat cggcgttgtc
     9961 ggaacggacg gcgaagacgg ctgccgcgtc aagggacaat gccagttcga cgtttttgcc
    10021 tgcgaggtag attttgtcgg catcgggcgc gatgccttcg atgacgaggt tggcggcatc
    10081 gagtgcggca actttgccga ccagtgcgtc gaaccagtcg tcgcttttgc cttgcgcgag
    10141 cagggtttcg gcggttgcgt caacggcttg gaaaatttgt gcgtccagtg cttttgcaaa
    10201 ggcttgtgcg gcggcggagg cgtccagtcc ggcagatacg ggtacgatga gtacttttgc
    10261 catgatatat cctttcgtat gctgcggtgt gcggcatatg tggttggaag gggcggcata
    10321 taggcagaaa cggctgcctg cgtgccgtgc gtgccgtgtt tggcttgagg cgcgcaggtt
    10381 gaatatagca aacaaattct gtttccaaca agataaatat ccgcaggctt gtggatgctg
    10441 ccgcctttca gagggtattt ccggggaaga acagggcggg accgtccaaa tggaggacgg
    10501 cggaaatgcc gtctgacagg gtgggggcgg aagggaggtt gagcgtgagg acggtttgtc
    10561 cgacccggag gctgatttcg gtatgccgcg ctttgggcgt ggttttgaga accacggcgt
    10621 gaatggaggc ggtgggtgcg gaatgggggt gaaggctgaa ctgttccgga cggatgagca
    10681 gtgtgccgcg tgtgcctgcg ggtgcgccgc tttgaacggg caggcggccc aatccgcaat
    10741 cggcggtgcc gtcggcgttg agcgcggcgg ggaacacgat gccttcgccg ataaacaggg
    10801 cggcatcaag gtcggcaggt tgtcggtaca attcgtgagg gcttgcagtt tggaggatgc
    10861 gcccctgttt catcacggca atccggtcgg cgtattgcag ggcttcttcg cggtcgtggc
    10921 tgacgaaaac ggcagatttg ccgttggcgc gcagggcggc aatcatgtct tcgcgaatct
    10981 ggcggcgcaa ctgttcgtcc agcgcgctga agggttcgtc caacaaaatc agttcgggat
    11041 cgggtgcgag ggcgcgggcg agggcgacgc gctgttgctg tccgcccgaa agttcgtgcg
    11101 gatagcgtcc ggcaagttcg gaaatgccgg tcaattccaa catagcttcg atgcgctgcc
    11161 gctcttgcgc cgtcttgcct ttgccgttgc ccagcccgta ggcggtgttg cggtaaacgg
    11221 tcaggtgggg gaacagcaca ccttcctgta cgacataacc caaacggcgt tcgcggacgg
    11281 ggaggttggt atttttcgag aagatggttc tgccggaaag cgaaatttcg ccaaaatcgg
    11341 gttgttcaaa accggcaagg cagcgtaaaa gggtggtttt gccgcagccg gacgcgccga
    11401 cgataaagag gatttcgccc gggtcgaggc tgagcgaaat gtcgtttaaa actggggtgt
    11461 tttgaaaact tttggacagg tgtccgatgt gcagggcggc ggtcatggcg gtacttcctc
    11521 aagctgttat ttgaaggcgt atttcttcag caggaatacg gggatgccgg aaaataatac
    11581 cagcatcagc gcgtaagggg tggcggcggc gtattgtgcg tccgatgtgt attcccaaac
    11641 ggcggtggag agtgtgtgga catcgtcggt ggtcagcagc agggtggcgg tcagctcttt
    11701 catcagtttg aggaagacga gtgcgaatgc ggcggtaatg ccgggcagga tggacggcag
    11761 taccaacgtc ctgaaaataa agaagtgtcc gcgccccaat gttgcgccga cctgttccat
    11821 cccttttggg agttgttcca aggaagtcct cagggtggtt tgcgccatcg gcaggtaaag
    11881 catgaaatag gcaaggatga cgacgataaa ggtttggtaa acggcagggg tgtagttgat
    11941 gctgaaataa accaaggata gggcgataac caaaccgggg acggcgtgca gtaaaaacgg
    12001 cagcctgtct atccaaacgg ttaaaaaatt gcgatagcga accgatgccc aaacaagggg
    12061 caaggcacat aatatagtca aaatcgcacc taaagccgat acgcttaagg aacggataaa
    12121 ggcatcaaat acggatacga gcgcgaatgt gccggaagtg ccgaccatca tccaatgtat
    12181 caatacgcca aaggggataa taatgcccaa agtcaacaag ctgcttaaaa aaacaatcgc
    12241 gccaatctga ccgggcagtt tgagggtttt gacgggataa ggacgggcaa cgcctttgcc
    12301 gctgtggtaa atcttggctt tgccgcgaaa tatgctttct ccaaatacga cgatgccgca
    12361 caccgccatt aaaacagcgg aaagcagggc ggcggtattg ttgttgtagg acatttcgta
    12421 ttcttggaaa atggcggtgg taaaagtggg gtagttcaaa atggataccg cgccaaattc
    12481 gaccaacata tgcagggcaa tcagtaacac gctgctgccg atggcgggtt tgagctgggg
    12541 gaggatggcg gaaaaaaagg tttgcaggcg gcttttgccc aaggacaggc tgacttcttc
    12601 gtaagacagg ctgatgcgtt tgagtgccgc ctcgacgggc aggtaggcga gcgggaacga
    12661 ggacaggctc ataatcatca ctgtccccca aaagccttcg acacggaagg tcaggctgat
    12721 ccaggtgaaa cagctgacaa atgcggggat gcacaaaggc agggtgattg ccgtctgaaa
    12781 aaaggttttg ccgaagaagc ggtaacgttg gaacaaaagg gcgcaggcaa tgcccaaaac
    12841 aatggaaatc agggtaacgc ccgccatcat cgtcaaggtg ttggagagca aatcccacat
    12901 acgcgggcgg aacaacagtt cgacggcgcg gttgatgccg acctgccacg aacgcatagc
    12961 gacatataaa aaaggcaggg taagcggtag ggcaatcagt aggatgaggc cggtaagcca
    13021 aatgggtatt tttttaggag acatagtgtt ttttatcggc aaaacgggcg gacagtataa
    13081 atgtccaccc gtttgacaat ccgaaaacgg cttatttcat accggcttgc tcaagcagcc
    13141 gggtggcgtg ttctttttcg gaaacagtgg tggcggacac ttggggtgct tccaacttgg
    13201 cgatgggttc caaattgaag gtggatacca cgtgcggatt caaaggatac tcggcacgga
    13261 cggcggtcag ggcgcgctgt ccttccttgc tggcgaggaa ggcgacgaat tttttcgcct
    13321 catccttgtt ttgggaggat tttaacacgg ctgcgccgga ataggtaacg agtgcgccgg
    13381 gatctctgtg gcggacgaaa ttcaggcggg tgtggacatt ttgtacgcct ttttcacgcg
    13441 caaaagcgtg ccagtagtag ttgttgatga gggcggcatc gatttcgccg ttttcaaccg
    13501 cttgaagggc gacggagttt ttagcgtaag gcttgccgta ttctttcaga cctttgagcc
    13561 atttcaatgc ggccgcttcg cctttcagtt tgacgatggc gacaacctgt tccaagaacg
    13621 cgccggaagt gggggcgtaa ccgatgcggt ttttccattt cggcgtggcg taattcagga
    13681 cggatttttc caaatctttt tcagacagtt tgcgggtgtc gtaaacgacg acgcgcgaac
    13741 gtccgctcag tgccacccag tcttttttgg cggcaaccgg cacgcccttg ccgcgtgttt
    13801 cgttgatggt ggaggcgggc aggggctcta ggaggttggc ggcggaaagg gtggcgagtg
    13861 ccgggatttg ttcggaatag aatacgtcgg cggggcttcg gctgccttct tctttgattt
    13921 gaccggcaag ctggtcgcct ttggcgctgt tgagtttgac tttgatgccg gtagcccggg
    13981 taaaggcatc tgcaacggct tgtgctgctt ctttgtgttg gccgttgtac acggtaatgt
    14041 ctgccagcgc gggggttgcg gcggtcaggg ctgcggcaag cagtgcgtat cggatagatg
    14101 ttttcatatc gattttctcc taatgaatga gagtgtacac cttgttaaaa cataacggtg
    14161 tgtagtgtat tccttcttct ttataaatgc aaataattat tttttaaatt tgttattatc
    14221 cgatccggtt atggtttgtt ctgacttgta ttttttccgt gcatcgcgcc cgtaaggcgg
    14281 aagcggcggg caatgcgtgg cggaatgtgg gtaaaggcgg cattttgatt tgtcggaatg
    14341 cttgagaacc cctctcttta aaacagcgtc tgaacagggt tgccggaata gtattgccat
    14401 cccggcagat acagtttgtc ggggtcttgc caatattgtt catccagact gttcggcagt
    14461 gaggcggttt tgttgtcgag atgttttgtt atatcccaca tttctttcag gtttttacct
    14521 tccgattgga ggtggcggat ttcttttctc aatgcgtctg ccgcccgatg gatcagcatt
    14581 gcgctgtgta tcgcgccgat ttttttcaga acggaacaag tcttttcggc ggcgggaaaa
    14641 ccccaattgc agacaaattg cagtatgccg ccgttaccga tatcggcttc tgtccgccaa
    14701 atcaaaacca gctcctgttc ccgcccgtcc atgctttcga gtttgccgtc atgctgttca
    14761 aaaagtttgt ccaccgcctg ccacatcatc tgttcgaagc ggtcggcttg ggtatccgta
    14821 tcggtcatcg tgttcttgcc ttttaaaaat gccgtctgaa catttcttca gacggcatcg
    14881 ggggttaagc caacatttcc cgccagcgtt tgacttggaa acggacttgt tcaggcgcgg
    14941 tgccgcccaa gtggttgcgc gcgtttaagc tgccttcggg tgtcagcacg ccgtaaacgt
    15001 cgtcggcaat caaatcgctg aaaccttgta agacttcgag cggcagttcg ctcaaatcga
    15061 cgccagcttc atcggcgtgg cgcacggctt gggcgacgac ttcgtgggca tcgcggaagg
    15121 gcataccttt tttaaccaga taatccgcca agtcggtggc ggtggcaaaa ccctgcatca
    15181 cggcggcgcg catattgtcg ggtttgacgg ttacgccgcg catcatatcg gcgtaaatcc
    15241 gcagcgtgtc gataagcgtg tcggcggtgt caaacaaagg ttctttgtct tcctgattgt
    15301 ctttgttgta cgccaagggc tgcgatttca tcagggtaat caagccgata aggtgtccga
    15361 tgactcggcc ggatttgccg cgcacgagtt cgggcacgtc ggggtttttc ttctgcggca
    15421 tgatggacga acctgtgcag aaacggtcgg cgatgtcgat aaagccgaaa cgcggactca
    15481 tccacaaaat caattcttca gacaggcggc tcaggtgaac cataaccagc gaggcggcgg
    15541 cggtgaactc gacggcaaaa tcgcggtcgg atacggcatc gagcgagttt tggcagattt
    15601 gttcaaagcc caatagctcg gcggtaattt cgcgctgaat cgggtaggtc gtcccggcaa
    15661 gggcggctgc gccgagcggc atacggttga cgcggcggcg gcagtccgcc atccgttcgt
    15721 tatcgcggcc gagcatttcg acgtaggcga gcatatggtg tccgaagctg acgggctggg
    15781 cgacttgcag gtgggtaaag ccgggcataa cggtttcggc gttttgttcc gccaaatcca
    15841 gcaatgccgt ctgaaggttt tgaatcaggc tttggataac ggtaatctgg tcacgcagcc
    15901 acaggcggat gtcggtggcg acttggtcgt tgcggctgcg gccggtgtgc aggcgtttgc
    15961 ccgcgtcgcc gattttgtcg gtcaggcggc gttcgatgtt catgtggaca tcttccaaat
    16021 cggacgacca ttcgattttg ccgctgcgga tttcttcgag gatttccgcc atgccccgac
    16081 ggatgtccgc caaatcgcct tcgtccaaca cgccggtttc tttcaacatt tgcgcgtgtg
    16141 ccagcgagcc ttgaatgtcc cattcggcaa gccgtcggtc gaaaccgatg gaggcggtgt
    16201 attgtttgac gagttcggaa acgggttcgt tgaaacgtcc ggaccaggtt ttgtcgtgca
    16261 taaggattcc ttgatggggt tattcggtgc ggtatttttc caaaaggcgg cggaagggtt
    16321 cgccggtttc ggggtgtttc aggccgtagg cgacggtggc ttcgaggtag cccagtttgc
    16381 tgccgcagtc gtagcgcgtg ccttcaaagg ggtgcgccag gacaaattcg tgatcgagca
    16441 gcttggcgat gccgtctgta agctggattt cgttgcccgc gccgcgcggc agtccggtca
    16501 gtaagtcgaa aatgcgcggg gtaaggatgt agcgtccgac gacggcaagg ttggagggcg
    16561 cgtcttcggg cttgggtttt tcgacaatgc cgataatgcg ttggaactgt ttgagctgtt
    16621 cggtttcgac gatgccgtat gagccggttt gcgatgcttc aacggtttct acgcccaaaa
    16681 tgctgttgcc gctgcgcccg tacacttcga ccatttgttt gagcgcgcct ttgggggcat
    16741 caatcaggtc gtcggcaagg ataacggcaa agggttcgtc tccgatggcg gcgcgggcgc
    16801 acaagacggc gtgtcccaag cccagtgctt ccgcctgacg gatgtagagg caggtaatgt
    16861 tcggcggcag gatgttgcgg acgtgttcca acaatttgtc tttatggcgc atttccaact
    16921 cggtttcgag ttcgtatgcc ttgtcgaaat ggtcttcgat gctgcgtttg ttgcgtccgg
    16981 taacaaacac catttccgtg cagccggctt ccacggcttc ttctacggcg tattggatca
    17041 gcggcttgtc gacgatgggc agcatttctt tcgggcttgc cttggtggcg ggcaggaagc
    17101 gtgttcccat ccctgcgacg gggaagacgg ctttttttat cggtttcatt ctttttcctt
    17161 tgtattgttt tgatgtttaa agggcgagtt tgcggattaa atcggcgagt gcctgcgcgc
    17221 ggtggctttc gcggtttttg acctccgaat ccaattcggc ggcggttttg ccgtgtccgg
    17281 gcagataaaa atacgggtcg taaccgaaac cgttttcacc ggcgggaacg ccgttccatt
    17341 gtccgtgcca tacgccctcg gcgataattg gacgcgggtc gtctttatgg cggacaaaaa
    17401 ccaatacgca gacgtagcag cagcttttgt cggtcttgcc ggcaagttcg gcggcaagtt
    17461 tcaggttgtt ggcggtatcg gatttgggat tgtcgcccgc gtaacgtgcg gaatggatgc
    17521 ccggcgcgcc gtttagggcg gcggcacaga tgccgctgtc gtcggcaagc gcgggcagcc
    17581 cgctgtattc ggcggcatgg cgtgcttttg ccagcgcgtt ttcgacaaag gtgggatagg
    17641 gttcggggca ttcgggtatg ccgaatgcgg attgcggcaa tacggtgatg ctgtaaggtt
    17701 tgaataagtt gccgaattct tcgagcttgc cggcattgcc gcttgccaaa acgatttttt
    17761 ccggtttttc agacatagcg gttttccttt gcggcggatt gggcggcgcg tagggatttg
    17821 tgccgcaggt agagggcgag gctgccgatt tgtccgaaca gtgcgccgaa tgcgaaaaga
    17881 aaggaggcga cggcgaaggc tttgctgccg acggtcagca gataagcacc caagaggacg
    17941 agcagcataa atgccagtgt gaagagggca acagacaaca gatagatttt tcggcggttc
    18001 atggcgttcg gtcggaaacg gtatgttcgg attatagccg attgggacgg tattccctag
    18061 agcttggaaa aatgccgtct gaaacggcgt tcagacggca tggcgggcgt tatgcctgtt
    18121 tgttccaacg ttcgatggat tctttgatga cttttttcgc ttcttccgca tcgccccacg
    18181 attcgacttt ggtcgtacct gcttttttca ggtctttgta atggttgaag tggaactcga
    18241 tttgtttgat cagctgttgc ggcaaatcgg acaaagtttt gtaggcgttg ccgttgttgc
    18301 ggtcgtcggc aggaacgcag acgattttgt cgtccacttc gccgtcgtca acgaatttca
    18361 tcacgccgat aacgcgcgct tccaagaata cgccggttgc caaaggttgt tcggtaacga
    18421 gcagcacgtc caattcgtcg ccgtcttcgt ccaaagtttg gggaatgaag ccgtagttgg
    18481 tcggtttggc gaagatggcg ggttcgacgc ggtcgagttg gaatgcggcg agtttgcggt
    18541 tccactcgat tttgtggttg ctgccggcgg ggatttcgtt gacgacgttg atgatgccgc
    18601 cgtccacatc gccgggggtc aggatttggt tgaagtctgc catttggttt cctttgtttg
    18661 ggaaagtttg aagtttgaaa gtatagcaca aacgtccggc tgaaaatgcg cccgatgccg
    18721 tctgaaaggg tgtacgggcg cgtgttaccg tttgcccaaa aacctgccca gttccagaat
    18781 cgcgcgcctg ttggacgggg aaaacacttt ttccgccgct tcttccaagc cgaaccagcc
    18841 gtaggagacg tgttcttcgg gttgcagggc gatgggcgta tcacgcggga tttcggcaga
    18901 gaagaggtgt tcgcggtttt caaacacgcc ttttggatag cggtgccgcc agtggtggta
    18961 gatttcgtaa accgtgctgt cgtgccagtc ttgaagctgc ccgtccgcca gcaggatgcc
    19021 ggtttcttcc caaacttcgc gccttgccgt ttgggcgacg gtttcgcccg gttcgaggct
    19081 gccggttacc gactgccaaa atccttccgg atgcgtgcgt tcgatgagca ggatgccgcc
    19141 gtccccgcta taaaggacga ccagtgcgga gacggggtat ttgagcggtt ttgccatcgg
    19201 catctttcgg cgggctgcgg taatgaaggg gcggattata gcaaacgccg cacgttatgg
    19261 cgtttatcct tttccgtatc cttttttctg cacggatggg acgcgccggt gtttgccggt
    19321 aaattttccg ttgtgtcaaa aagataaggg cggttgtgat tttaatgctt gccaaagcgt
    19381 cgggcggaaa ctataatccg aaacttatcg agtcggagtg tggcgcagtc tggtagcgca
    19441 cttgcatggg gtgcaagggg tcgaaggttc gaatcctttc actccgacca aaaattccga
    19501 aagccgcttt caaaagcggc ttttttgccg tccgtatgat tatgatgtag agtacgcggc
    19561 gacagacatt caaatgccgt ctgaaaaccg ttcagatggc atctctttat cttagtttca
    19621 ttccgtacca tcttaaggaa catcaaattg ggcatttccc gcaaaatatc ccttattctg
    19681 tccatactgg cagtgtgcct gccgatgcat gcacacgcct cagatttggc aaacgattct
    19741 tttatccggc aggttctcga ccgtcagcat ttcgaacccg acgggaaata ccacctattc
    19801 ggcagcaggg gggaacttgc cgagcgcagc ggtcatatcg gattgggaaa catacaaagc
    19861 catcagttgg gcaacctgtt catccagcag gcggccatta aaggaaatat cggctacatt
    19921 gtccgctttt ccgatcacgg gcacgaagtc cattccccct tcgacaacca tgcctcacat
    19981 tccgattctg atgaagccgg tagtcccgtt gacggattca gcctttaccg catccattgg
    20041 gacggatacg aacaccatcc cgccgacggc tacgacgggc cacagggcgg cggctatccc
    20101 gctcccaaag gcgcgaggga tatatacagc tacgacataa aaggcgttgc ccaaaatatc
    20161 cgcctcaacc tgaccgacaa ccgcagcacc ggacaacggc ttgccgaccg tttccacaat
    20221 gccggcgcta tgctgacgca aggagtaggc gacggattca aacgcgccac ccgatacagc
    20281 cccgagctgg acagatcggg caatgccgcc gaagccttca acggcactgc agatatcgtc
    20341 aaaaacatca tcggcgcggc aggagaaatt gtcggcgcag gcgatgccgt gcagggtata
    20401 agcgaaggct caaacattgc tgtcatgcac ggcttgggtc tgctttccac cgaaaacaag
    20461 atggcgcgca tcaacgattt ggccgatatg gcgcaactca aagactatgc cgcagcagcc
    20521 atccgcgatt gggcagtcca aaaccccaat gccgcacaag gcatagaagc cgtcagcaat
    20581 atctttacgg cagtcatccc cgtcaaaggg attggagctg ttcggggaaa atacggcttg
    20641 ggcggcatca cggcacatcc tgtcaagcgg tcgcagatgg gcgcgatcgc attgccgaaa
    20701 gggaaatccg ccgtcagcaa caattttgcc gatgcggcat acgccaaata cccgtcccct
    20761 taccattccc gaaatatccg ttcaaacttg gagcagcgtt acggcaaaga aaacatcacc
    20821 tcctcaaccg tgccgccgtc aaacggcaaa aatgtcaaac tggcagacca acgccacccg
    20881 aagacaggcg taccgtttga cggtaaaggg tttccgaatt ttgagaagca cgtgaaatat
    20941 gatacgaagc tcgatattca agaattatcg gggggcggta tacctaaggc taagcctgtg
    21001 tttgatgcga aaccgagatg ggaggttgat aggaagctta ataaattgac aactcgtgag
    21061 caggtggaga aaaatgttca ggaaataagg aacggtaata aaaacagtaa ctttagccaa
    21121 catgctcaac tagagaggga aattaataaa ctaaaatctg ccgatgaaat taattttgca
    21181 gatggaatgg gaaaatttac cgatagcatg aatgacaagg cttttagtag gcttgtgaaa
    21241 tcagttaaag agaatggctt cacaaatcca gttgtggagt acgttgaaat aaatggaaaa
    21301 gcatatatcg taagaggaaa taatagggtt tttgctgcag aataccttgg caggatacat
    21361 gaattaaaat ttaaaaaagt tgactttcct gttcctaata ctagttggaa aaatcctact
    21421 gatgtcttga atgaatcagg taatgttaag agacctcgtt ataggagtaa ataaaaatgg
    21481 caatttggaa ttatcggtac taccttatcc catcagctgc tatcagaaat aaatttaatg
    21541 caaataaaga tatcatactt gatgagtatc gatctaatgg ttttcagaat tttaatgaga
    21601 ataaaagttt tgaaaattac tttatcgata atgatgttat attattatca ataataaatg
    21661 aagcaaaaaa acagcttaaa ttgaaagaat cttgggataa agacgcaatc atgttttgtg
    21721 ataattttgg taatagtctt accgtttggc cagatgatat agagtgcgaa cttgatttaa
    21781 gatttgatta tactaaattt attcagaaaa ccattgattg ggcaataaaa tataattgtc
    21841 tacttgtaat agaaaaaaca ggaaatgtag tttcccctaa tataaataat ctgatgtatg
    21901 aaataaaagc atatttggaa agcaagccgt ggcccatatg aaacctaaac tcaacaagta
    21961 ggatgtgtgc ggaacgcacg tatgcggttc tcaaggtttg agctaagagg ccgtctgaaa
    22021 acagaaaaac tgtttcagac gacctttctt ttaaccagtt gccacagcaa ccggacaaaa
    22081 gcagcctacc tccacatcca tataggcaat acaggggaga tattttgtaa attctacgaa
    22141 tattttacct gctaaacagg gtaggatatg gtatgaagcg aacattggct taataaacac
    22201 tatgtcaaga tcgaatcagg ctggtactag attgttgtat tccaattatg gattgctata
    22261 tataacaact gatcattata tctctgcaac acggtttgta gcttggaaat aggagtataa
    22321 cttatgcaat tagagattat cggtagtaaa atttatacgg aacaagattt tcataatcaa
    22381 atttcaaaaa tattttctat acaagattat tatgggaaca atcttgatgc tttatgggat
    22441 ttattaagca caaatgtaga acgaccgatt actttggtat ggaaagatgc tatgttctca
    22501 aaaaatcaat tagaaaatat atttattgaa atcgtaaatg ttctagaaag agttaagaaa
    22561 caagatgagg attatggatt cgaagaaaaa tttaattata ttttagagta agtaaaccct
    22621 aattacatta cgtacacagg cttaaaactc cccagagcca attaagcaag ccgtaaccca
    22681 tataaaactt aaactcaaca agtagcatgt gtgcggaacg tacgcatgcg gttcttaaag
    22741 tttgagctaa gaggccgtct aaaaacagaa aaaccgtttc agacggtctt tgtttaacgc
    22801 caccgatcca gcgggttaca aagcgcagtc aatgccgctg cgccttatgc ctccgaagca
    22861 ataggcagaa catttggaca cggtgaaaac aaaaacgaaa ccgcccaagc cgtcggacat
    22921 ttccttttag gagcagctat tgcccgcgtc aacggtggta attttgctgc cggcggctcg
    22981 gcagcagttg cagctgaaaa ggcggcggaa catcttgccc aacagtataa cgacggtaaa
    23041 accgcaatcg atccgcaaac aggcgagttc aatgccaacc tgctgccgga acatatcaaa
    23101 gaggaaatca aatcaaagag cggggtgatt gcatcgctga cgggcgcggc cgtgggcggc
    23161 acgccggtag atgcgcaaac cggaggtgcg gtcggacaga atgcggtgga aaacaacctc
    23221 tatctgacat cggaagcctt aaagaaggac aagcagacag ctcgtaaaat ttattccgtc
    23281 ataaaagagc aagtcaagca tgaatgcagt tccacaggaa gaattaccga atgtcgtcaa
    23341 aatataggac gcattatcga atttacccaa gacaaacgct ttgacagtag gtttaaggac
    23401 ttaaaaaaag aatccttata ttacctaaat aaacatcctg atttagtagc ctcttatttg
    23461 aaggctgaat acgaaaagct ggatagggaa gacaaaagta tcctgcaccg ctacatctca
    23521 cccggggctg aaatcgtttc gggcagtttg ggggttgttc tttcaggagt agccggaggc
    23581 ggatcttgtg ccgagacttt cggcttaggc tgtgccgccg ctttggttgg tgtaacgtct
    23641 tcctacgatc atgtcattac tgggacgaaa aacttcggaa aaaaagccag cgagcaacga
    23701 ccgacgattg cggttcaggc cttgaagcag ttggggctgt cggagcaggc tgcggaatat
    23761 gttcagttct ctatagattt gttcagtgtg ggtaaatcgg ggggcggtat acctaaggct
    23821 aagcctgtgt ttgatgcgaa accgagatgg gaggttgata ggaagcttaa taaattgaca
    23881 actcgtgagc aggtggagaa aaatgttcag gaaacgagaa gaaggagtca gagtagtcag
    23941 tttaaagccc atgcgcaacg agaatgggaa aataaaacag ggttagattt taatcatttt
    24001 ataggtggtg atatcaataa gaaaggcaca gtaacaggag ggcatagtct aacccgtggt
    24061 gatgtacggg tgatacaaca aacctcggca cctgataaac atggggttta tcaagcgaca
    24121 gtggaaatta aaaagcctga tggaagttgg gaggtgaaaa cgaaaaaagg tgggaaagtg
    24181 atgaccaagc acaccatgtt cccaaaagat tgggatgagg ctagaattag ggctgaagtt
    24241 acttcggctt gggaaagtag aataatgctt aaggataata aatggcaggg tacaagtaaa
    24301 tcgggtatta aaatagaagg atttaccgaa cctaatagaa cagcatatcc catttatgaa
    24361 tagtaatatt tatgaaaaat taggagatta atgatgaaaa gaattaagtg cttttgtgat
    24421 aaatttccat caggagatac atttagaatg tgtatcattc tggatgacta tgataatagg
    24481 gttgattatt atgtaggaat atatgattac attacgtcta ccttaatgag cgatatttac
    24541 tatcgatcca cgattgatga gcatttcaag attatagaat taatagaaaa taatccaaat
    24601 gaaatttatg atgatggcgg tggtcaacaa ttttgcctag aatttcatca tgataaggtc
    24661 attttttatc acaatgaatt tgatgaagaa gatggttatc cagtattaag ctgttcgctg
    24721 catactttta aaactgcttt aattgcttgg aatgcttttt tgcaattgcc taaaagtatt
    24781 cattcggtgg tggagactgt gattgaggaa taagcataat tagcttaatg aatagaatca
    24841 gcgatataga aaggtagaat cagatatatc ccacctaaaa attactctcc ttcagcaccg
    24901 ctaccaaaag gacctaataa tggatatagt gccgggaatt taagcaaaaa agtcctgact
    24961 ttagtttaca taaacggcaa actcaaattc gggccaagca gtctgccgtc ttcggcattg
    25021 aaagcacctg ttcccattgt cggcaaggct gaggctccgc ccggaaaagc tgtgcctgtc
    25081 ggcgaagccc gcattccttc aaatccaaaa gcggtaaaag gaacaaccgt taccctgtcg
    25141 caggaacaac gcctagccaa cggagagctg ataccgaaag gctctgtggt aacgtggtcg
    25201 gacaatgcgg tgaaggttgt gcggcctgat gggaaaaagc ggagatttaa tagtcgggat
    25261 tgggaacaga aggcattgcc gaaaccgcaa ctaccgaaag attacagaga tgacatcaac
    25321 ataggtggaa ataatcctag atttaatcag caacggcatg aaaaaatcga atcccacaac
    25381 ccaaacagaa tagaggagat acgccaacgt aatgccgttt cttctgcaga aaggcaggct
    25441 gatgcattaa aaaggatgca aacgtctggc cgcacccgcc tgcctgggca gccacaaaaa
    25501 ggaaaacccg gcgctgctag agaaatgtcc tcttcagaca atccgaatca aacagccgag
    25561 gcttttgcac gtcgatattt aggcaggaaa cctacactaa tggaacgagt cgaaggtgaa
    25621 aaattatacg gaggtaaatg tgtgggctgt tggaaagcgc aaatgccgga cggaaccttt
    25681 gtggtgtata ggccagcagg taatgcttct atgaccaagg gaactactgc gtctgttgat
    25741 attaataacc caacattaaa taacttaaat attaatttaa aaggcaagcc aacagagtta
    25801 aaatttaaat tccctgctag ataaggatgt tttaatgaat ttagagacag cagaaaatat
    25861 tcaatgcgaa tttgagtatt tagcattaga tggttatttt ccaatgcatt ttgcatcgca
    25921 tggtcaagga aacaaagatt ggcaatttgc agttgaattc atatatagat tattaatatg
    25981 tcaattagca actcttgaac ctatcaactt tgaaacgaaa aatgatattt tagacttttg
    26041 ccataattta gcaaaacaaa gtccttttaa taatgataat gaggtgtggt atcaggggga
    26101 aattgtatta acaaaaaaag ggatagattt aataaaggaa tatattccag aggcgtttga
    26161 agagtggaat ggaaagaaat ttgaattaaa cattcctttc attaaaacat taaaaaatat
    26221 atttgttaat tatgaggtag catgggatga gaataatcca ctattcccca ttatatcttt
    26281 aaacctcggc acctgataaa catggggttt atcaagcgac agtggaaatt aaaaagcctg
    26341 atggaagttg ggaaatgaaa aaaggaaggg gcggaaaacc tatgacaaat cattctatgt
    26401 tcccaaaaga ttgggatgag gctagaatta gggctgaagt tacttcggct tgggagaaaa
    26461 gaaaggaatt agaaggtcaa aaatggagag gtacaagtaa atctggtgtt gaaatagaag
    26521 gatttacgga acctaatcga acagcttatc cactttataa tagtaaatga agtattgatt
    26581 aaaaaggtgt ttttaaatgt ataaaataaa atgtttttat gatcagttta gttctggtga
    26641 attatttaac tactgccagt ttttagataa ttcttctaat caaaagataa atacacgagg
    26701 aacggtgtat caatatatta tttatgtttt aacaggagac ctttatctac aaaaagacat
    26761 agatgaaaat ttagaattta tccatcaagc agaaaataat cccaatgaag tttattcagg
    26821 aggtggacaa ggtttttgct gggatatttc tgctgaaaaa gtagttttct atcacaacga
    26881 atttgatgaa gaagacggct ggcctgattt aagctgttcg ctgcatactt ttaaaactgc
    26941 tttaattgct tggaatgctt ttttgcaatt gcctaaaagt attcattcgg tggtggagac
    27001 tgtgattgag gaataagcat aattagctta atgaatagaa tcagcgatat agattggact
    27061 gcaaatccac gcttatacgc tgtgccatga ttaacaggaa gagagcaact tggatgggct
    27121 agtagggatg gtaagcattt aaatatatca attgatggaa agattacaca caaatgacta
    27181 atttaaaatt agatttctac tctgaagtta ttataaaaga ttcttgccct aatgatttgt
    27241 tagaaaatgg tgagactatt aaaggaaaaa aaggagtggt attaggtata agcgaagaag
    27301 atggtataat ctatggctat actattttac tttttgatat aaaatattgt atatatatag
    27361 ataagaaata tattataccg actggaaaaa aattctctcg cgatgatttt tattagctaa
    27421 tttaagtaat ttaagcaagt tttttagata ctgaaactgg taattatgtt tatgtaagca
    27481 taaggagttc agattgaagg attctacagg gcaaatgagg ctggcaacca aggatttggc
    27541 ggaagccatt aaacgaggag aagtacgtag ttctgctttt acaacaaagc aactaaaggc
    27601 aatcgaaaaa ggagaatcta aaataccgga ttacacttgg catcatcatc aagacactgg
    27661 aaggatgcaa ttgattaatg aagacttgca tcatgatacc ggccatatcg gttggagagc
    27721 gatgagtaaa ggaaagtaa
//
LOCUS       DBBZXW010000015        24506 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.015, whole genome shotgun sequence.
ACCESSION   DBBZXW010000015 DBBZXW010000000
VERSION     DBBZXW010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24506
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.015"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(431..2272)
                     /locus_tag="ACJJD2_000599"
     CDS             complement(431..2272)
                     /locus_tag="ACJJD2_000599"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HGG7579190.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFKIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGSILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            2363..2833
                     /locus_tag="ACJJD2_000600"
     CDS             2363..2833
                     /locus_tag="ACJJD2_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HGG7579191.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            complement(2904..3716)
                     /gene="hpnC"
                     /locus_tag="ACJJD2_000601"
     CDS             complement(2904..3716)
                     /gene="hpnC"
                     /locus_tag="ACJJD2_000601"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HGG7579192.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYGNFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(3803..4285)
                     /locus_tag="ACJJD2_000602"
     CDS             complement(3803..4285)
                     /locus_tag="ACJJD2_000602"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7579193.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            4759..5040
                     /locus_tag="ACJJD2_000603"
     CDS             4759..5040
                     /locus_tag="ACJJD2_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579194.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPATEAPAA
                     EAPATEAPAAEAPAAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAAK"
     gene            5150..6517
                     /locus_tag="ACJJD2_000604"
     CDS             5150..6517
                     /locus_tag="ACJJD2_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HGG7579195.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLIIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELVGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(6698..8683)
                     /locus_tag="ACJJD2_000605"
     CDS             complement(6698..8683)
                     /locus_tag="ACJJD2_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HGG7579196.1"
                     /translation="MISLFFSILYTSPLLAVDYVYDNSKLTNEQIDRLKKLRDKSSEY
                     WKQETYLLKPTNGSSQNSLKVPALYSKTHQFKNINNSKKISFYDKEYTEDYLVGFARG
                     FGVEKRNGEEEKTLQQYFKDCVNTGNSNNDKCEQPSFENSGPRLIKSDIFALAPQIKN
                     SHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFHYIEVTDNSHVIGQTISLDE
                     FRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAGGARFRFAYDLKDKVS
                     ETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNGTADKHAFRLSGKHQKGIYT
                     LSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLNDKNSDIFDRTLPRKGLWLR
                     VIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQLSVGLMSGQAEQRSTFRNP
                     DTDNLTTGNVKGFGAGIYATWHQLQDKQTGAYADSWVQYQRFRHRINTEDATERFTSK
                     GITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLGVNGKFSDSENAHVNLLGSR
                     QLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGVEIDGERRVINNKTAIESQL
                     GVAVKIKSHLTLQASFNRQTSKYHQAKQGALNLQWTF"
     gene            complement(9114..9560)
                     /gene="smpB"
                     /locus_tag="ACJJD2_000606"
     CDS             complement(9114..9560)
                     /gene="smpB"
                     /locus_tag="ACJJD2_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HGG7579197.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(9615..10625)
                     /gene="waaF"
                     /locus_tag="ACJJD2_000607"
     CDS             complement(9615..10625)
                     /gene="waaF"
                     /locus_tag="ACJJD2_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HGG7579198.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDKAKIVSLHLECSPCFKRECPLGHTDCLNKLYPEKIVQAVEE
                     AV"
     gene            complement(10756..10831)
                     /locus_tag="ACJJD2_000608"
     tRNA            complement(10756..10831)
                     /locus_tag="ACJJD2_000608"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10796..10798),aa:Asn,seq:gtt)
     gene            complement(11022..11774)
                     /locus_tag="ACJJD2_000609"
     CDS             complement(11022..11774)
                     /locus_tag="ACJJD2_000609"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HGG7579199.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETRVCECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHMEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPNAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            12085..12432
                     /locus_tag="ACJJD2_000610"
                     /pseudo
     CDS             12085..12432
                     /locus_tag="ACJJD2_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
     gene            complement(12421..13019)
                     /locus_tag="ACJJD2_000611"
                     /pseudo
     CDS             complement(12421..13019)
                     /locus_tag="ACJJD2_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751227.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(13751..14896)
                     /gene="dapE"
                     /locus_tag="ACJJD2_000612"
     CDS             complement(13751..14896)
                     /gene="dapE"
                     /locus_tag="ACJJD2_000612"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HGG7579200.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARAAIAEICGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNAV"
     gene            complement(15009..15629)
                     /locus_tag="ACJJD2_000613"
     CDS             complement(15009..15629)
                     /locus_tag="ACJJD2_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HGG7579201.1"
                     /translation="MLTSKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQVWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTDKYAAFDMWHGAESEYDDYRTVAQQSESDR
                     KLQNDEDFFCIGKHIERDDLGKQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(15654..16163)
                     /locus_tag="ACJJD2_000614"
     CDS             complement(15654..16163)
                     /locus_tag="ACJJD2_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG7579202.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQITRYFNVAAPLHHEDEEEDFFPLLLQYAPQAREGVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDAEAFKRFVAGYDVHLAIEEPLFDMGNTFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(16258..16809)
                     /gene="azu"
                     /locus_tag="ACJJD2_000615"
     CDS             complement(16258..16809)
                     /gene="azu"
                     /locus_tag="ACJJD2_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HGG7579203.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEEASLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(17090..17512)
                     /locus_tag="ACJJD2_000616"
     CDS             complement(17090..17512)
                     /locus_tag="ACJJD2_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HGG7579204.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDVSIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAAKLEKRHPELAEALANLVRRHGA"
     gene            17644..20394
                     /gene="secA"
                     /locus_tag="ACJJD2_000617"
     CDS             17644..20394
                     /gene="secA"
                     /locus_tag="ACJJD2_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HGG7579205.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            20538..22310
                     /gene="dnaG"
                     /locus_tag="ACJJD2_000618"
     CDS             20538..22310
                     /gene="dnaG"
                     /locus_tag="ACJJD2_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HGG7579206.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAEAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEVGRILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            22496..24424
                     /gene="rpoD"
                     /locus_tag="ACJJD2_000619"
     CDS             22496..24424
                     /gene="rpoD"
                     /locus_tag="ACJJD2_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HGG7579207.1"
                     /translation="MSRNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         6316 a         6826 c         5710 g         5654 t
ORIGIN      
        1 aatcggttcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta
       61 atccactata tccgactttc catacttaaa cagcactgcc tcttttcaga cattgacggt
      121 tgcagccgcc cacctgaacc ttaatgattg actatttttt aatcatgtta ttattttcca
      181 taaaatacat gacattaaga tgtttttcca caaaagatac acacaccggc aaacaccggc
      241 tgtgtttatc ttttcttatg cctatttttt aatcatcgta tttttatctt ttaatttcaa
      301 tacgcaaact aacttataca cacggttttc acatctttgg actgcttccg tgtgtatagc
      361 ggatattgcc gttttccttt ctgacaaaaa tgccgtctga gaacttcaga cggcatttga
      421 aacatcggaa tcagcggttt tgttcatacc actcgataaa cttgtctgct ttgacaaaac
      481 ccagcagcgg ctcgctgcgg ctgccgtcgg agcggacgac aaacacgccc ggcggcccga
      541 acagaccgta ttctttcaac aacgcctgat gttcgggcgt gttggcggtt acgtcgattt
      601 ggaaaaagcg ttccatatcg actgcctgat gcacttccgg ctgattgagc gtgtaagccg
      661 ccatttcttt gcaggaaatg caccagtcgg cataaaaatc caaaacgacg ggtttgtcgg
      721 gatgttcttt caacgccgta tccatcgctg ccttcagcgc ggcagtatcg gcaaacattt
      781 tgccgtgttc cgaagatttg cctgcttcgg ccggcggatt gagggtcagg aaatggtgca
      841 gcgcggtcgt tttgccgttt gcgccctgcc agccgaacca cgcgccgcct atcagcaata
      901 tgctgcccaa tgcgaatgcc acagctttcg gacggcgttt ctgcctgcgt ccgttgacca
      961 gcagcataca ggcaggaacc agcatcagca gcgtgtacag cgcgacgacg agataatagg
     1021 gcaagtgcgg cgtggcgagg taaacggcga cggcaagcag gataaagccg aaagcgtatt
     1081 tgacggcatt catccaatcg cctgccttag gcaggatatg cccgccgaac gtgccgatgg
     1141 caatcagcgg aacgccggtg cccaacgcca aagtgtaaag tgccaaaccg cctaaaaccg
     1201 catcgcccgt ctgaccgatg tagcccaaag caaatgccag cggcggggcg acgcacggcc
     1261 cgacaatcag cgcggacaat atgcccataa taaagacgga aacgatttta ccgcctgaaa
     1321 gcctgctgct ttgattctga aaatacgact gcacggcgtt gggaagctgg atgttgaaca
     1381 gcccgaacat agacagtgcc aagacgacca tcaaagccga tgccgccaac acgacccaag
     1441 cctgctgcaa ccatacggtc agcagtgcgc ccgtcagtcc ggcaacaatg ccgaccagcg
     1501 tataagtcag agccaaaccc tgaacataaa cgacggacag cacaaacgcc cgcgccttgc
     1561 ccgccttttt gtcgccgacc acaatactgg aaacaatcgg caacagggga tacatacagg
     1621 cggtaaaact cagacccaaa ccggcgagaa aaaacgccaa aagattggcg ttgagcgtat
     1681 cccaagacag cttgaaacgg ctgtcgccgc cctcatcccc cttcgggggc ggcagcgccc
     1741 cgctgccgtt ttgagaggaa ggctgcaaaa agcggtcttt ggcggatgcc ggttcgtcgg
     1801 tttgcggatg gtaagtgccg ttgccggaaa tatcaaactc ggtatccacg ggcggatagc
     1861 acacgccggc ttcggcacag ccctgatagg tcaaaaccaa tttatacggt tcgccgacag
     1921 cctttgcata aggaaaggca acctgcgctt cgtgatggta aaccgtctgc ctgccgaaaa
     1981 actcgtcttc cttctcttcg cccttgctga aagaaggctg tcccaacaaa tccgccggat
     2041 cggtcttgcc gacgattttc gcctgataca tatagtatcc gtcggcaatc ttgaaacgga
     2101 cgttcacacc gtcgtcggca acggcaagct ccggcacgaa tgccttttcc ggcggcagca
     2161 gatcgttcgc atccagcgcg aaagctcgtc cgcacaacat caaaaatacg gcgaacaggc
     2221 aaatcagttt tttcataatc gaatccgttt cagacaaata atttgtctgc attataaatg
     2281 gtaaggttga cggtgggatt taatttatgt aaaacccgcc attatccgaa cctatttcca
     2341 taaccatctt atcgaacccg ccatgtacga tgtcaatacc cacgatgtcc gccgcttttt
     2401 cgcccgcgtg tggcagcagc ggctcaatcc gctgcaactg agcgcactgg aacagaaagc
     2461 cctccgcatt gtcgaagccc atcccgaata ccaccgctat ctcgaacgca tcgaagacca
     2521 tctggacacc gactggctgc ccgaaaacgg cgaaagcaac cccttcctgc atatgtcgct
     2581 gcatctgtcc gtccaagaac aggcgggcat agaccagccg cacggcatac gcgcaatcca
     2641 cgacaccctg tgcgccaaac gcggctggct ggaagccgaa cacgaaatga tggaggcact
     2701 ggcggaaaca ctgtggacgg cgcaacgcta cggcaccggt ttggatgtca atttctacat
     2761 gacccgactg cgcaaactca tcggcttggg tgcagaagat caagccaggt tgaacccaca
     2821 tgaaatcgcc tgaccatacc aaccgcctgc aaaatgccgt ctgaagcgga acaacccctt
     2881 tcagacggca tgcatttccc ccatcatttc cacaacgcgc gtttcagcat aatcaaccaa
     2941 tccttcttat ccaaaacggg gcgttgtgca aacacatcgt atcggcacgc gtccagtttc
     3001 tgcaaaatca actgcgcccc taacacaatc atacggagtt ccaaaccgat acgccctttc
     3061 aattcgcgcg ctaaaggcga acccgccttc agcatacgaa atgcgcgccg gcactcatac
     3121 gccatcagcc gctgaaacgc cgcatccgcc ctaccctccg caatctgtcc ttcggaaaca
     3181 ccgaatttca acaaatcgtc ctgcggaata taaaccctgc ccttttgcca atccacagcc
     3241 acatcctgcc aaaaattcac cagttgcaaa gccgtacaga tgccgtcgct ttgcgccacg
     3301 cacaccgcat ccgttttccc gtacaaagcc agcataatgc gtccgacagg attggcagaa
     3361 cgtcggcaat aatcggccag ctcgccgaaa tttccatacc ttgttttaac cacatcctga
     3421 gaaaatgcag aaagcaaatc ataaaacggc tgcaaatcca aaccgaacgg cacaaccgcc
     3481 tcggcatcca atcgtgcaat caaaggatgc gccgaccggc cgcccgatgc caacacgtcc
     3541 aactcgcgcc gcaaaccctc caaccccgcc aacctggctt cagacggcat actgccctcg
     3601 tccgccatat cgtccgccgt ccgtgcaaac gcgtacaccg cgtgaaccgg cttcctcaac
     3661 ctgcgcggca aaatcagcga accgacggga aaattttcat aatgcccaac cgacatacct
     3721 tctccatcca tcaaacaaaa tgccgtctga aatggaacaa acccttttca gacggcatca
     3781 gatacctcca agctgccggc aatcagtggt ggtgatgacc gtgcggaccg tggacatgac
     3841 cgtgtgcgat ttcctcatcg gatgcatcgc gcacactttc aaccgtagcc ttaaagcgga
     3901 ttttcatgcc tgccaaagga tggttgccgt ccaccaccgc cttgccgtcg gcaacatcgg
     3961 ttacacgata gacgacaaca tcgccggttt caggatcgtc ggcttcaaac atcatgccga
     4021 cttcgacttc aacagggaac acgcccgcat cttcaatacg gaccaactcc ggatcctgct
     4081 cgccgaacgc atcgtcgggc gacagcgcca catcgaccgt atcgccggca tccttaccgt
     4141 gcaacgcctc ttccaccaaa gggaaaatgc cgtcgtaacc gccgtgcaga tacgcaatcg
     4201 gttcttcggt tttgtccaaa agctgattgt tggcatcata catctcataa tgcagcgaaa
     4261 ccacggaatt tttcacgata gccatatttg tcctttcagg aacagcagat tgattacagg
     4321 cgcattctaa cacaaccgcc gcgccggccg attaccgtta acctgttcat aaactgtaca
     4381 gcacatattt caatgtaaat ttttgttatt ttattgcggt gtaacttttt tacaacattc
     4441 ttaaaaccat tccgacctgt ctgccgactt tcccaatccg ccttaataaa tcatacaaga
     4501 tactgaaatt atattaatct ctataatatt tatccctatc gaatttttaa cagcaaaacc
     4561 gttttacagg atttatcaat ccgcccgcca gaaaactttt cattcaaacc tttttcccat
     4621 ctgtacgaca ttgcaatccc ttattccata gtgcataatt acgcaaattc agcgatgaat
     4681 ttccaacccg gtttgtagta tggtcgataa aagacctatt tgtttcaata atttaaattg
     4741 gttctaaagg ttactaaaat gaaaaaatcc ctgtttgccg ctgctttgtt gtctttggtc
     4801 ctggcagcct gcggcggtga aaaagccgct gaagctcccg ctaccgaagc acctgccgct
     4861 gaagctcccg ctactgaagc acctgccgcc gaagctcccg ctaccgaagc acctgccgcc
     4921 gaagctcccg ctgctgaagc tgccgctact gaagcacctg ccgccgaagc tcccgctgct
     4981 gaagctgccg ctaccgaagc acctgccgct gaagctcctg ctgccgaagc tgcaaaataa
     5041 gcattttccg cttgcaaaaa agcaggatac gttcagtatc ctgctttttt gatttttcag
     5101 acggcatcag attcccttcc tcaatcttct ccctaccctt ccgacaaaca tgcctgacct
     5161 tcataccgaa ttttcccgac tcctgccggc agatgaaatt gccgaacttt ctccgacgct
     5221 tttaaaagac cagcgcaacc gctttacgtc tgcaccagac atcattttgc agccgcgcag
     5281 cgttgaaagc gtgcaaacca ttatgcgttt ttgttacgaa caccgtattc cggttacgcc
     5341 gcaaggcggc aataccggtt tgtgcggcgc ggcagtatcg gaaaacggcg tattgctgaa
     5401 cctttccaaa ctcaaccgca tccgcagcat caatttgtca gacaactgca taaccgtcga
     5461 agcaggttcc gtactccaaa ccgtccaaca ggcagccgaa gcctcaaaca ggctgttccc
     5521 actcagtctc gccagcgaag gctcctgtca aatcggcggc aacatcgcct gcaatgccgg
     5581 aggtttgaac gtattgcgtt acggcacgat gcgcgacctg attatcggtt tggaagtcgt
     5641 cctccccaac ggcgagctgg tttcccatct ccatcccctg cataaaaaca ccaccggcta
     5701 cgacctgcgc catctgttta tcggcagcga aggcacactg ggcatcatca ctgccgccac
     5761 actcaagctt tttgcccgtc cctcggacaa ggcaacggca tgggtcggca tacccgacat
     5821 cgaatccgcc gtccgcctgc tgaccgaaac ccaagctcac tttgccgaac gcctatgcag
     5881 ttttgaactg gtcggccgtt ttgccgccga gttgtcttcc gaattcagca aattccccct
     5941 gccgacacat tcagaatggc atattttact tgagttgacc gactcattac ccgacagcaa
     6001 tcttgatgat cggcttgtcg aatttcttta taaaaaagga tttaccgaca gcgtattggc
     6061 acaaagcgaa caagaacgta tccatatgtg ggcattgcgc gaaaacatct ccgcatcgca
     6121 acgcaaactg ggcaccagca tcaaacacga tattgccatt cctatcggac gcgttgccga
     6181 ctttgtccgc cggtgcgcca aagatttgga acagaatttt aaaggcatac aaatcgtctg
     6241 cttcggacat cttggcgacg gcagcctgca ctacaatact ttcctgcccg aaatcctcag
     6301 caatgaagtc tatcgttacg aaaacgacat caacgacgca gtttatcgca acgttcttgc
     6361 ctgcaacggc acgattgccg ccgaacacgg cataggtatc atcaaaaaac agtggctgga
     6421 caaagtacgc acgcctgccg aaatcgccct gatgaaaagc atcaaacaac accttgatcc
     6481 atataacatt atgaatccgg gcaaactgct tccgtaaccg gcatttctga tttgcataca
     6541 caacaaagaa agggacaata gatccgattg tcggtttagc gcgagctcgt gagtgcggta
     6601 aaaaattggt ggaaatgaca cgaaaaatga ccgcattttt aaaataaaaa aatcggcagt
     6661 gaatttccct gccgatttta ttttgttaca acttaactta aaacgtccac tgcaaattca
     6721 acgcaccttg tttagcctga tgatatttgc ttgtttggcg gttgaatgag gcttgtaaag
     6781 ttaagtgaga tttgattttc actgctacac ctaattggct ctcaattgcc gtcttattgt
     6841 ttatcactcg acgctctccg tctatttcca caccgaaagg tttgttgtgg taaagcgcgt
     6901 tcacagcggc gaaaggttca atagcgatat ttttatagag tgaaaattga gctttagctt
     6961 gaacgccaac ccgagtttgt aattggcggg agccaagtaa attcacgtgg gcattttcgc
     7021 tatcgctgaa ttttccgttt acccccaaat aagtcaattg tgcctgtggt tgtaggtaaa
     7081 cacgaaggct gttgcccttt ttagtgaagt gttctgccaa taaagcattg taacccgctt
     7141 caattgaggc ggtaatacct tttgaagtaa aacgttctgt agcatcttca gtgttaatgc
     7201 ggtggcggaa gcgttgatat tgtacccagc tatccgcata cgcacctgtc tgtttgtcct
     7261 gaagctgatg ccaagtggca taaatgcccg ccccaaagcc tttcacattt cccgttgtaa
     7321 gattgtctgt atctggattg cggaaagtgc tgcgttgttc tgcttgtccg ctcattaagc
     7381 caacggaaag ttgattactt tcgttttgcc atgtgaatac ttcgccaccg agttgcacac
     7441 ctttacgata gccttctaca ggtgctgttt tgccttgcac ccattggttg gaatgtccgt
     7501 caatcacacg caaccacaag cctttgcgtg gtaaagtgcg gtcaaaaata tcgctgtttt
     7561 tgtcgttcaa acgcaaggcg aataaggtat tggcggcttg agcctgttgt gcataaatcg
     7621 aaatatcatc gcgttcttgc actttggtaa aaaagccttc tgggcgttgt tgtaaagaaa
     7681 gcgtataaat tcccttttgg tgtttgccag aaagacggaa tgcgtgttta tctgctgtgc
     7741 catttacttt gataatttga tgcccgtcga gactttttaa atcgtctatt ggattttcga
     7801 agatgatgtc ggaagtgcca gttatatttt tttcaaaagt taaaactggt gtttcagaga
     7861 ctttatcttt tagatcgtaa gcaaaacgaa aacgagctcc gccagcataa tcttctttta
     7921 cgagtaaact ttcactttta gtattaaaac ggatgtctgc attcgttgtt tttaattccc
     7981 caacatcaga atcccaacgg ggttcccaga gagaattttc taagcggaat tcatccaaac
     8041 taattgtttg tccgataacg tgtgagttgt ctgtaacctc aatatagtgg aatggatcta
     8101 aaccagaata gagatgctct tgccaactag gaagcttatt aagtgttggg cgaagccatt
     8161 cgatataatt acctacagat aaaatttcgc tgttgatatg gctatttttt atttgtggag
     8221 ctaaggcgaa aatatcgctc tttattaatc ttgggccaga gttttcgaag gatggttgtt
     8281 cacacttatc attattggaa ttcccagtat ttacacagtc cttaaaatat tgctggagtg
     8341 ttttttcttc ttccccattt cttttttcaa ccccgaaacc tcgggcgaag ccaacaaggt
     8401 aatcttcagt gtattccttg tcataaaaag aaatcttttt tgagttgttg atgtttttga
     8461 attggtgtgt tttagagtat agtgcgggaa ctttgagaga gttctgagag ctaccattcg
     8521 tcggttttag aagataagtt tcttgtttcc agtattcgct gcttttatct ctaagttttt
     8581 ttaagcgatc aatttgctca tttgttaatt tagaattgtc gtaaacgtaa tcaacagcca
     8641 aaagcggaga ggtataaaga atagaaaaaa atagacttat aataaatgat tttttaaact
     8701 tctgcttgct tgcttgcttg cttgcttgct tcgagtttca taataaattt tcctttgtca
     8761 agtaaaaata aatggggcgt ggattttagc ataaaactga acaaaaaatg tcatttagct
     8821 cacatttttc tctatttatt tcttatttat taaaggtaaa cgtttgcttt ttgctatttt
     8881 gtcaagccag tttgaaaatg tgtataattg ccctcgttat ttacaaaaat ttcaggaaaa
     8941 atgaccgcac tttacccttg gctaatgcca atttatcatc aaattgctca aacctttgat
     9001 gaaggtttgg ggcatcatgc tgtgctgatt aaagcggatt ctggtttagg tgtagaacgt
     9061 ttacacatca ggcggcagcc ttgcccatac cgtctgaagc actgtttcca caatcagcgc
     9121 gtatgcttaa tcaaccgctg tttctcgcgt ttccaatccg cctctttcat actctgacgt
     9181 ttgtcgtgct gtttcttacc ttttgccaaa ccgatttcca tcttgatttt tccgcgcgaa
     9241 aaatgcaaat ccagcggcac gatggtgtag ccggcacgtt cggttttgcc gattaatttg
     9301 ttgatttccg actggttcaa caagagcttg cgcggacgta cggcatctgg tttaatgtgt
     9361 gtcgaggctg tgggcaaagc cgtaatatgg cagccgacca gataaaacgc gtcttttttc
     9421 caatagatat aactctcttt aagctgtacg cgcgcggcgc ggattgcttt gacttcccag
     9481 ccttccaaga ccaaaccggc ttcaatccgg tcttcaatga aaaaatcgtg aaatgctttt
     9541 ttattgttcg caatagccat aaacatccta tcaatatccg ccgtcagacg gcataaaccc
     9601 gaaaacagaa cccatcatac cgcctcttca accgcctgca caatcttctc gggatacagc
     9661 ttgttgaggc agtctgtatg ccctagcgga cattcccgct taaaacacgg ggaacattcc
     9721 aaatggaggc tgacgatttt tgccttatcg ctcaaaggcg gcgtgtgtgt cgggctggaa
     9781 gaaccgtaaa ccgccaccac cttcctgccc aatgccgccg ccaagtgcat cagcccgctg
     9841 tcgttgcaca cgaccgtgtc cgccaacgac agcaaatcca ttgcctgcga caaatcggtc
     9901 tttccgcata aattcacaca cataccgtct gaaaggcagt tgatttcctc ggcaatttca
     9961 tcatcttttt gcgaaccgaa cagccaaacc tgccaacccg ccgccagata atgtttgccc
    10021 aactcggcaa aatgccttgt cggccaacgc tttgccggcc cgaattccgc gcccgggcaa
    10081 aatgccaaaa caggctttcc aagattcaaa ccgaaagttt cgacagaaat ttcccgccgc
    10141 cgttcatcaa tggaaaactc ggggaatccc gaatgcccgt caaaatcttc ctgactcgga
    10201 tgcgcgagag ccgtatatct gtccaccatc aaaggcagac gttccttatc cagcctgcgt
    10261 atatcgttca acagaaaata acggctttca ccgacataac ccgtcctttt ggcaataccc
    10321 gttgctagcg cgatgactgc cgatttcaaa gaaccgggca acacgataac ctgatcgtat
    10381 ccgcgccgcc ccaaatccct gccgacccgc cagcggcgtt tcaactccaa cgcaccgtgt
    10441 ccgaacggat tttcaagaat ctcattcact tccggcatac gctcaaacac cgccatcgac
    10501 cacttcggtg cgaacacatc aatcgtgcaa ccggggtgaa gttccttcaa acggcggaac
    10561 aagggctggg tcatcacgca gtcgcctatc caactgggag aaataatcag gattttgatg
    10621 gacataacaa gaaaccgaaa tcagacaggc agaattttac cgcgaaaccg ttggaaaacc
    10681 tatcttgccg cattccgaac gccgtacgtg caaatatgaa aaagcccgaa cattcaagtt
    10741 cgggcttcaa aattctggct ccccgacctg ggctcgaacc agggacctgc ggattaacag
    10801 tccgtcgctc taccgactga gctatcgggg aatggggcgt attatagcgt ccggaaaaaa
    10861 tgtgtcaatc cttaattttg gaaaaatggg cgacaaaacg acaagcatat gaatcagaaa
    10921 gacattaaga ccgatgcctt aaaaggattg ccgttgtatg aatttccaca gccgtcatca
    10981 caccatattt aagcccgatg agccgttctg ccctcccccg cttaaaacaa tgccgtctga
    11041 acttcgccgc gttccaaagc cagtaaaaac tgtttgcggt tcaacccgcc cgcgtagccg
    11101 gtcagtttgc cgtcgctgcc gatgacgcgg tggcagggaa tcaagataga caccttgttc
    11161 tgcccgttgg cggcggcaac ggcgcggacg gcgttggggt tgcccaaacg ctgcgcctgc
    11221 tctttgtagc tgcgcgtttc gccgtaagga atcgccaaga gcgcgtccca tgcctgcttt
    11281 tgaaactcgg tgccaatctg ctccaaaggc gtggcaaagg ttttcagacg acccttgaag
    11341 tataagtcca attcctgccg caaaagttgc gtccgctcat cctcccgaaa cacaaaccgt
    11401 ccgcgcaagg ctttttggac ggcggcaatt tcctgctcca tatgtttctg tccgacaaac
    11461 tccagcagac acaatccctt atttccgaac accgccagca tctcgcccaa aggcgtggca
    11521 atggcggcac acaccagctc attcaaactg tcgggataac gcgcttccaa cagacggatg
    11581 gctcggcgga tacggacata ttcttcaggc gcgcagccga tattgtccca aaaatcccga
    11641 tcgaactgcc cggcttcgca ttccgtcaaa ttgggatgcg gcataacgcc gcactcacaa
    11701 acccgggttt cgagccaata gcggatttca tcccattttg acggcagatt gtttaaggaa
    11761 ggcagggtaa tcattcgttt gctccgtatc tctatcatgg atttggcggc aaaatcccca
    11821 atttttgcca ttcccgcacg ccggagcagg aacgggctat gacgtaaatc ttgagggtta
    11881 ggttgcggca atacctaaat attcgatatt tctaaagcct cagggaaagg aattaaagac
    11941 ttcagacgac ctgcaaaggc tcgtctgaaa ccacgatttt tgcatttgcg cattccggca
    12001 catcatccaa ccgtttcggc acattcctgc cgccgttgac agcctataat gaatccactt
    12061 attcatcaag caaaggaacc gtctatgcaa acccgcattc tctccgccgt actgctggct
    12121 ttttcaaccg ctgcctttgc cgggggcgca ttcacgctgc aattcgacaa cccgtccgaa
    12181 gacggcggct tcacgcaaaa ccagcttttg agcgcgcctt acggatttgg ctgttcgggc
    12241 ggcaatgctt cgcccgcgct gtcgtggaaa aatccgcccg ccgggacaaa aagtttcgtc
    12301 ctgaccgttt acgataaaga cgcgccgacc ggactgggct ggatgcaccg ggtggtcgcc
    12361 gacattcccg ccgatgtcca ccgccgcaac gcgacctcgc tgcaattaag ccgctgcgcc
    12421 aacatcgccg accggactgg gctggatgca ctgggtggtc gccgacattc ccgccgatgt
    12481 ccgccgccgc aacgcggcct cgctgcaatt aagccgctgc gccaacatcg ccgacgacca
    12541 gtccgcagcc atatcggcgg taatcagttt gcggatttgc cgcatcaggt tgacgccttc
    12601 gtacacggca aaaccgatgc cgtcatgctg caaccacgcc aacacgccgc aaagcgcgac
    12661 ctccgccgca ttgtgcggca cttcttcatc cgtcagcacc gccgccgcat aatcaaacgc
    12721 cgcgcccatc cgcccggggt gcggcagctt caccgcatcg cacactgcct gcgccgtccc
    12781 gtattgtgcg gcgaaccttt ctacggtttc ctgttcgaaa gcaatccatt gcgcctgata
    12841 gaggccgtct agatcgggaa tattaataac gtcaaacgtc tgtccgcctg ccaacgcgac
    12901 cgcctcaccc gccgcagctt cttacttccg cgccgcacga taagcacagc cggttcatat
    12961 accgccacgc tgcggtacaa ggcggtatga tgttgcacga tgccgcccaa agcacccaat
    13021 cgtccgcgcg tatataaagt aatttgacgg cacggttata ttcctcaatg tttcaacaca
    13081 cagggccgca cataaggcac agccctgttt accctgattt ggaaggggtt acttcccaaa
    13141 aaataaacca aaatcccatc gcccagaagg gccgggtttc aaccatattc cgtcggcgtg
    13201 cctgcaactt gactccctcc cctgtggggg agggttgggg agagggtaaa acggggcaga
    13261 tacagacaat atttccgtta ccgccccgat gccctcccct aaccctctcc cacgagagag
    13321 ggaatggatt gccgttgaaa taaatcgctc tacataaaaa atcaatgtgt tatctcaaac
    13381 ccacgttagg tctaataaaa tggtcggaca tccgtatccg acagcccatc ttcttttcag
    13441 acggcattgc aaatttaagt ttgacgtgcg ttcaaaataa ggcagttaat gcgaagcgaa
    13501 attccgtcgg cgtacctgca acttgactcc ctcccctgtg ggggagggtt ggggagaggg
    13561 taaaacgggg cagatacaga caatatttcc gttaccgccc cgatgccctc tccctaaccc
    13621 tctcccacgg gagagggaat ggattgccgt tgaaataaat cgctctacat aaaaaatcaa
    13681 tgtgttatct caaacccacg ttaggtctaa gcaaatggtc ggacatccgt atccggcaag
    13741 caagctgctt tcagacggca tttccagcca acaaccgcgc caatatcccc tcatacaccg
    13801 cagacagctt cggaatgtcg tttagccgca cgttttcgtt gatttggtgg atggtcgcat
    13861 tggacgggcc taattcgatg agttcttttg caatggcttt gatgaagcgt ccgtccgaag
    13921 tgccgccggt ggtggacaat tcggtctcta cgccgcagat ttcggcaatg gcggcgcgtg
    13981 ccacgtcggt cagtttgccc gcgtgggtca ggaagggctg ccccgaacac gaccactgca
    14041 aatcgtattg cacaccgtgt ttgtccaaaa tggcgtggac gcgttgtttc agccctgctt
    14101 cggtggactc ggtggagaag cggaaattga atttgacgct cagctcgccc ggaatgacat
    14161 tggtcgcgcc tgtaccgccg ttgatattgg aaatttgaaa gctggtcggc gggaagtatt
    14221 tgttgccttc gtcccagact tcctgcgtca gctctaacaa ggccggggca aaagtatgca
    14281 cgggattgat tgccaaatgc ggataggcaa tatggccttg cttgcctttg acggtcaggt
    14341 tgcccgacag cgagccgcgc cggccgtttt taatcatatc gcccaatttg tccacggctg
    14401 tcggttcgcc gacgatgcag tagtcgataa gctcgtcgcg cgctttcaat acatcgacga
    14461 ctttggtcgt gccgtccaac gcgtcgccct cttcgtcgga agtaatcaga agcgcaatgc
    14521 tgccttggtg gtcgggatgt tcggcaacga agcgttcaca ggcggtaacg aagcaggcga
    14581 tgctggtttt catgtctgcc gcgccgcgcc cgtataatct tccgtcgcgc tcggccggtt
    14641 cgaacggggg cgaatcccat ttttcgacag gacctgtcgg tacaacgtcg gtatgccctg
    14701 caaaacagac gacgggagct ttcgtgccgc gtcgcaacca gatgtttttg gtgtcgccga
    14761 aatggagttc ttcagccgca aaaccgattt tgtgcaggcg ttcggcaagg agtttttggc
    14821 aatccctgtc gtcaggggta acggatggtc gggaaatcag ctctttggca agctctaggg
    14881 attgagtttc ggtcatattt gttcactttt gaaattagac cgtctgaaac gttctgaatg
    14941 tgattttcag acggcattta ggttaggttg gcatacgggg tgggtatttt acccatcagt
    15001 cttctgaatc atttgccgtg gcaggcttcg taaagcggca gcaaatcttc caccgtttcc
    15061 gctatccatt tcgcgacatc ctgcttgccc aaatcgtcgc gctcgatgtg tttgccgatg
    15121 cagaaaaagt cttcgtcgtt ttgcaacttt cggtcggatt cgctttgttg tgcgacggtg
    15181 cggtagtcgt catattcgct ttccgcgccg tgccacatat cgaatgcggc gtatttgtcg
    15241 gtatcgaaat catccaacca gcggttgtat tcgggcagcg caatcggcga cacgtcggct
    15301 ttgtagcagt gccaatccaa gctgacgctc aggcggcggc ggttcaataa aatcgataaa
    15361 atcgcggcgg aatttttata ttgttcgtat ttgaagtagg caaagaaatg ggcgcgcacc
    15421 tgccagccgt tacaccagcg ttcgatatgc ggcggcgcga acggcgcacc caattcggcg
    15481 gcaacctgct ggatcagctg ctgccatacc tgccagtttt ctttatagtc tgccttgatt
    15541 tgcggaatgc tttcaggctg gtatttttta agctgggaaa attggaaaaa cgggatattg
    15601 aacaaatcgc aacttttcga ggtaagcata gtgtattcct tgagacgatt accttatttg
    15661 cgccgacgcg ccgccatgat ttcaccgatt tcggtcagtt tttctttagg gataaaggtg
    15721 ttgcccatat caaacagcgg ctcttcaatc gccaaatgaa catcatatcc cgccacaaaa
    15781 cgtttgaacg cttccgcatc gggaacataa gcattgtctg cttcgagctt ggcaaattcg
    15841 gcggaaacag ccgcccagtt gtcgtgcagc ccgatatgtt ggcgtaaaag ctcgtccaca
    15901 ccttcacgtg cttgcggcgc gtattgcagc agcagcggga aaaagtcttc ttcttcgtcc
    15961 tcatgatgca gcggcgcggc aacgttgaaa taccgggtga tttggcggat ggtttgcaaa
    16021 acaatttgat tgcagccgtt ttcggcgatg tagtccgaca gcatggcgac ttgtccgcaa
    16081 aaacggcgca ctttgccgtg gcaggcatac agcatttcaa tcggttcggc aaaggtaacg
    16141 cttttggttt caaacggatt catgttttcg ttctcaacgg gcacttttca agcagtcatt
    16201 ttataataaa acagcctgca caaagcaggc tgtccgtctt ttgagacttt aagcggatta
    16261 atcgaccaaa gtcactttgc cgttcatcaa agcaccgtga cctgggaagg tacaagcgaa
    16321 tttatattcg ccgtcggcca atttagcagg atccagagtc agggaagctt cttcgccgcc
    16381 gccgatcagt ttggtatggg caacaacgcg tgcatcatca ggtttgacat agtcggtatc
    16441 ggcagcacct acgccgtctt taaatacgcc gtccatgtct tcagctttgg caatcacgag
    16501 attgtgaccc atgctggctt tgggttgcgt accggtatgt ttcagagtga tggtaaactc
    16561 tttacatgct ttgctgactt ggatgtcttt ggtgttgaac tgcatattgt cgttggattc
    16621 gacagttgcc gcacagttgc cggcagcagg ggcttcggca gcatctgcag gagcagcttc
    16681 ggcggcaggc gcttcggaag cgggtgcttc agcagcagga gttgcctcgg cagcaggcgc
    16741 ggcaggttct tgagagcagg cagccaaacc gataacggcg gcagaaatca gagccagata
    16801 cgctttcata acaaatctcc aatcgataaa ataatattcg gttttacgga aatcaaagtg
    16861 caaccgccat taacaaaacc ttgaaaaaga ttccgccgcg ttgcacaaac agatgtttcg
    16921 gagcggcatt ttgctacaaa tttcatttga aatcaaagcc tgtctgcaag tttacaatcg
    16981 tttactttaa aaggggcaat tttaccccga acctatttct ttagtattag acccattatc
    17041 ctttacttct taatattaac ggatgtttac acaaattccc gtatacattt tatgcgccat
    17101 gccttctaac caagtttgcc aatgcctccg ccaattcggg atgccgtttt tccaactttg
    17161 ccgccgccga accgaaactc tccagcgcag ccttactcaa atgcagggta ttggttttcg
    17221 gcggtttttc cggtttcggg accagcctga ccgaaacaga gcgtatcgaa acatcaagcc
    17281 ctgccaactg cggcaatacc gacggtgcaa tcattttcaa acgcgatgcc gccatattgt
    17341 ttgccgccaa aaggacaagc ctgccgtctt cgatacatgc cgtctgaaaa tgcgggtgca
    17401 ggttggcagg cagcagtttt ttcacggcgg catccaaccg ccgccactgt cccgcctgtt
    17461 tcaaaagtcc ggaaagcagc gcgtcccgcc tgcccaactg ttccaaattc ataaaacata
    17521 cacccaaaaa gattgaaata ccgcaaacgc gcctttattt cagacggcat tagcactttg
    17581 cacaaacgct tgtgttaaaa tcgcgttttc gccccactat tatatcaggc gcaggaatta
    17641 ttcatgctga caaacattgc caagaaaatc ttcggcagcc gcaacgaccg cttgctgaaa
    17701 caataccgta aatccgttgc cagaatcaac gcgctcgaag aacagatgca agccctaagc
    17761 gatgctgatc tgcaagccaa aactgccgaa ttcaaacaac gcctcgccga cggtcagact
    17821 ttggacggca ttttgcccga agccttcgcc gtctgccgcg aagcgtcccg ccgcaccctc
    17881 ggtatgcgcc acttcgacgt gcagcttatc ggcggtatgg tgctgcacga cggcaaaatc
    17941 gccgaaatgc gtaccggcga aggcaaaacc ctggtcgcca ccctcgccgt ctatctcaac
    18001 gcgctggccg gcaaaggcgt acacgtcgtt accgtcaacg actacctcgc ctcacgcgat
    18061 gcgggcatta tggagccgct ctacaatttc ctcggcctta ccgtgggcgt gattatttca
    18121 gatatgcagc cgttcgaccg tcaaaacgcc tatgccgccg atatcaccta cggcaccaat
    18181 aatgaattcg gcttcgacta cctgcgcgac aatatggtta ccgaccaata cgacaaagtg
    18241 cagcgcgaat tgaattttgc cgttgtcgat gaagtggatt ccatcttgat tgacgaagcg
    18301 cgcactccgc tgattatctc cggtcaggcg gatgacaaca tccagttgta ccaaatcatg
    18361 aacaccgttc cgccccacct cgtccgtcaa gagacagaag aaggcgaagg cgactattgg
    18421 gtcgacgaaa aggcacatca ggtcatcctg agcgaagcag gtcacgaaca cgccgagcaa
    18481 atcctgaccc aaatgggatt gctggcagaa aacgactccc tctattccgc cgccaatatc
    18541 gccctgatgc accaccttat ggcggcattg cgcgcgcatt ccctcttcca caaagaccaa
    18601 cattacgtca tccaagacgg cgaaatcgtc atcgtggacg aattcaccgg ccggctgatg
    18661 tccggccgcc gctggtcgga gggtctgcat caagccgtcg aagccaaaga aggcgtggaa
    18721 atcaaacgcg aaaaccaaac ccttgcctcc atcaccttcc aaaactattt ccgcctgtac
    18781 accaagctct ccggcatgac cggcacagcc gataccgaag ctttcgagtt ccaaagcatc
    18841 tacaacctcg aaaccgtcat catcccgacc aaccgccctg tacagcgcaa agacttcaac
    18901 gaccagattt tccgttccgc cgaagaaaaa ttcgaagccg tcgtcaaaga catcgaagaa
    18961 tgccacaaac gcgggcagcc cgtcctcgtc ggcaccacca gcatcgaaaa ctccgaactg
    19021 gtctcccacc ttctgcaaaa agccggactg ccgcacaacg tcctcaacgc caaagaacac
    19081 gaacgcgaag ccctgattgt cgcccaagcc ggcaaagtcg gcgcgattac cgttgccacc
    19141 aatatggcgg gacgcggtac ggacatcgtt ttaggcggca acctgaagca ccaaaccgat
    19201 gccatccgtg ccgacgaaac cttgagcgac gaagagaaac aggcacaaat cgccgcactc
    19261 gaaaacggct ggcaggcaga acacgataaa gtaatggaag caggcggcct gcacatcatc
    19321 ggtacggaac gccacgaaag ccgccgtatc gacaaccaat tgcgcggacg ttccggccgt
    19381 cagggcgacc ccggatccag ccgtttctac ctttcgtttg aagacccgct gctgcgctta
    19441 ttcgcactcg accgcgccgc cgccatcctc aaccgtctcg cccccgaacg cggcgtcgcc
    19501 atcgaacaca acctgctgac gcgccaaatc gaaggggcgc aacgcaaagt cgaaggcaga
    19561 aacttcgata tgcgcaaaca ggttttggaa tacgacgacg ttgccaacga acagcgcaaa
    19621 gtcatttaca gccagcgcaa cgaaattctg accagcaaag acatcagcga cctgatgcag
    19681 gaaatccgtt ctgatgtcgt cagcgacctc gtggatacct atatgccgcc cgacagcatg
    19741 gaagaacaat gggacatccc gactttggag aaccgtctgg ctgccgaatt cagactgcac
    19801 gaagacatcc aatcctggct gaaggcggac aatgcgattg acggtcaaga catcaaagaa
    19861 cgcctgatcg aacgcatcga aaacgaatat gccgccaaaa ccgaactggt cggcaagcag
    19921 gcaatggccg atttcgagcg caacgtgatg ttgcaggtca tcgacaacca atggcgcgaa
    19981 cacctcgccg ctatggacta cctgcgacaa ggcatacacc tgcgcagcta tgcccaaaaa
    20041 aatccgaagc aggaatataa acgtgaagcc tttaccatgt tccaagacct gtggaacggc
    20101 atcaaattcc atattgcctc cctgcttacc tcggttcaaa tcgaacaaaa ccctgtcgcg
    20161 gtggttgaag agcaacccat cggcaacatc cagtccatcc attccgaatc gcccgatatg
    20221 gaagaacttt tgggtcagtc gcaaaccgat ttggttaccg aggcctttaa tcccgatgga
    20281 acggatttca gccccgaagc cttggaagcg cggggacaaa tcgtccaccg caacgacccc
    20341 tgcccctgcg gcagcggttt gaaatacaaa caatgccacg gcaaactggc ttgagcgttt
    20401 gaacgcaaat gccgtctgaa catccggttt ccggcttcag acggcatttt gcctgaaccg
    20461 ccacatccga ccgccattcc gaaaaatccc gatttcgtac cgtccaaact aaaaacaggc
    20521 atccgccccg ccgaactatg attccatccg acttcattga cgaacttctg gccaaaaccg
    20581 atattgtcga catcatcgac gaacaggttc cgctgaaaaa aggcggggcg aactatatgg
    20641 cgtgttgccc gttccacaag gaaaaaacgc cgtcgttttc ggtcagtccg accaagcagt
    20701 tttaccactg tttcagttgc ggggcgcacg gttcggcgat tggttttgtg atggaacatc
    20761 aggggctgtc gtttccggag gcagtgcagt tccttgccga ccgcgtgggt atgattgtgc
    20821 ctaaagtgcg cgggcagaac gataatcccg aagtccgtgc cgaacgtaag aaaaagcagc
    20881 agacgctgga agaaacgaca gcggaggcgg ctgattttta tgcgcaacag ttgaaattca
    20941 atccgacggc gaaggcttat ttggacaagc gcggcttgag cgcggaagtc atcgcgcatt
    21001 atggtttggg ctacgcgccc gacggctggc agcctttggc gcaagtattc caaccgtacc
    21061 cgaataccgc gttggtggat acgggtatgg tgattgacaa tgaggggcgg tattacgacc
    21121 gattccgtca tcggattatg ttccccatcc gcaatccgcg cgggcaggtc atcggtttcg
    21181 gcggcagggt gctggacgac tccaaaccca aatatctaaa ctctcccgat acgcctttgt
    21241 ttgataaggg gaaaaacctt tacggcttgt atgaagggcg tgctgctgtc aaggaagtgg
    21301 ggcggattct ggtggtcgaa ggctatatgg acgtggtcgc gctggcacag ttcggcgtgg
    21361 gctacggcgt ggcggccttg ggcacggcaa caacagcgga acacgtcaaa atcctgatgc
    21421 gtcaggcgga cagtatttat ttctgtttcg acggcgacag cgcggggcgc aaagcggctt
    21481 ggcgcgcgct ggaaaacgcg ctgccgcagt tgaaggacga caaatcgctg cattttttgt
    21541 tcctgccgga agaacacgac cccgacagtt acatccgtgc ctacggcaaa gcgcaatttg
    21601 aagacgcgct tctgaatcaa agcaagcctt tgtcggagta tttctgggaa cacctttcag
    21661 acggcattca tctcaatacg caggaaggca aggcggaatt ggtgaaaacc agttcgccgc
    21721 ttttggcgca gattaccgcg ccggcattgg cttatttgtt aaaacaacgg cttagcgaac
    21781 tggtcggcat cgaccccgac aacctcgcgc aactgctggg acaggaagcg ccgaagcggc
    21841 acgtcaaaca aaaaaactac aaactgcccc cgatttccgt caaacagccc gttatgccga
    21901 cattggtgca acggcaaatc cgcagcctct tgataaatcc ggattgggct gcatatatag
    21961 acctgcccga ttatctggcg ttggacggcg atttcgcctg ccttgccaac ctcgccgaaa
    22021 ccattaaaaa ccatccttcc gtgccggcaa ccgcacaggt tttggaacat atgcgcggct
    22081 cgccttacga agaaacgata acccgaatct tccattcaac gcaccaatcg gaagaaatga
    22141 acagcagcag tgaagaagat tgcgagaatt tccaaatcgg catgaaaaaa ctgctcaatg
    22201 agttaaaata cagccaaatc gaaacattaa aacaaaaaag cctgcaatcc ggcttaaatg
    22261 aaagcgagaa aaaacttttg ctgtcgctgc tgaccgcaaa acaaaattga ccggcggatt
    22321 ccgccatccg taaaccgtta tgccgtctga aaagcactta ccccggctgc aacaacgaca
    22381 cctgcagaac acccatccca aaaagccttc agacggcatc agagtacccg ctctgccacg
    22441 ccttcaggtg cgttcaaacg caaaccgtcg gcaccttacc aacagaaagc agacaatgtc
    22501 cagaaaccaa aatcacgaag aataccaaga cgatgcccgc cccctgacga ttgaggaaca
    22561 acgcgctcgc ctgcgccaac tcatcattat gggcaaagaa cgcggctaca tcacctactc
    22621 cgaaatcaac gacgcactgc ccgacgatat gtccgatgcc gatcaaatcg acaacatcgt
    22681 cagtatgatt tccggtttgg gtatccaagt taccgaacac gcccccgatg cggaagacat
    22741 attgttaagc gacaatgccg ccgttaccga cgatgatgcc gtcgaagaag ccgaggccgc
    22801 cctttccagc gcagattccg agttcggcag gacgaccgac cccgtccgta tgtatatgcg
    22861 cgaaatggga caggtcgacc tgctgacccg cgaagacgaa atcatcatcg ccaaaaaaat
    22921 cgaaaacgcc ctgaaaaata tggttcaggc catctccgcc tgcccgggtt ccattgcgga
    22981 aatcttagaa ctcatcgaaa aaatccgcaa agacgaaatc cgcgtcgacg aagtcgtaga
    23041 agccattatc gacccgaatg aagtattgct caacgaattg ggcttggggc acttggaaac
    23101 cacagcaccc gagaaacctt ccaacgacaa ttcggacgaa aacgaagacg acgaagaatc
    23161 ggaagaagat gcggatgaaa tctcggcagc caatctcgcc gaattgaaac aaaaagtcat
    23221 cggccacttt gcccaaatcg aaaaagacta caaaaaaatg attggccgtt tggaaaaaca
    23281 ccacagccgg cacaaagact atctcgccta ccgcgacgcg attgccaaca aacttttgga
    23341 agtccgcttc gccacccggc aaatcgacag cctcagcagc agcctgcgcg gaaaagtaga
    23401 aaacatccgc aaactcgaac gcgaaatccg cgacatctgc ctcgaccgcg tccatatgga
    23461 gcgcgactac ttcatccaaa acttcctgcc cgaaatcacc aatctggaat ggattgaaga
    23521 agaaatcgcc aaaggcaggg tttggagcga cgcgctcgac cgcttccgcc acgccatcct
    23581 cgaaaaacaa accgagttgg cggatatgga aaaagaaacc cgcatttcca tcgaagagtt
    23641 gaaagaaatc aacaaaaata tggtgtcaag cgaaaaagaa accgcagctg ccaaacagga
    23701 aatgattcag gcaaacttgc gcctcgtcat ttccattgcc aaaaaataca ccaaccgtgg
    23761 cttgcagttc cttgatttga ttcaggaagg caacatcggc ctgatgaaag cggtcgacaa
    23821 gttcgaatac cgacgcggct ataagttctc cacctacgca acctggtgga tccgtcaggc
    23881 aatcacccgc tcgattgccg atcaggcgcg taccatccgc attccggtac atatgattga
    23941 aaccatcaac aagatgaacc gcatctcgcg ccaacacctt caagaaaccg gcgaagaacc
    24001 cgattccgcc aaacttgccg aactgatgca gatgcccgaa gacaaaatcc gcaaaatcat
    24061 gaaaatcgcc aaagagccga tttcgatgga aacccccatc ggcgacgacg acgattcgca
    24121 cttgggcgac ttcatcgaag atgccaacaa tgttgcgccg gccgatgcgg caatgtacac
    24181 cagcctgcac gaagtaacca aagaaatcct cgaaagcctg acaccgcgtg aggcaaaagt
    24241 cctgcgtatg cgtttcggca tcgatatgaa caccgaccac acgctggaag aagtcggcag
    24301 acagtttgac gtaacgcgcg aacgcatccg acaaatcgag gcaaaagcac tccgcaaatt
    24361 acgccatccg acaagaagcg accgtttgag aagtttcttg gacagcgaag acagcaagct
    24421 gtaaaccaaa aaaccgcagg tttcaaatac ctgcggtttt ttcttacaca ataaacaacg
    24481 cttccacata tcccacactc ctatcc
//
LOCUS       DBBZXW010000016        24243 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.016, whole genome shotgun sequence.
ACCESSION   DBBZXW010000016 DBBZXW010000000
VERSION     DBBZXW010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24243
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.016"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(29..178)
                     /locus_tag="ACJJD2_000620"
     CDS             complement(29..178)
                     /locus_tag="ACJJD2_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579208.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAVFSCVSYADVSTHRTIQKAS
                     PYVPS"
     gene            complement(196..393)
                     /locus_tag="ACJJD2_000621"
     CDS             complement(196..393)
                     /locus_tag="ACJJD2_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579209.1"
                     /translation="MTTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(404..1420)
                     /locus_tag="ACJJD2_000622"
     CDS             complement(404..1420)
                     /locus_tag="ACJJD2_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HGG7579210.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(1519..2733)
                     /gene="gltS"
                     /locus_tag="ACJJD2_000623"
     CDS             complement(1519..2733)
                     /gene="gltS"
                     /locus_tag="ACJJD2_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HGG7579211.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(2951..4357)
                     /locus_tag="ACJJD2_000624"
     CDS             complement(2951..4357)
                     /locus_tag="ACJJD2_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG7579212.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAETQAHAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            complement(4724..5983)
                     /locus_tag="ACJJD2_000625"
     CDS             complement(4724..5983)
                     /locus_tag="ACJJD2_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HGG7579213.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            complement(6120..8168)
                     /locus_tag="ACJJD2_000626"
     CDS             complement(6120..8168)
                     /locus_tag="ACJJD2_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HGG7579214.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSL
                     VQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYR
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQTDILTCLQY
                     ADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK
                     "
     gene            complement(8330..8869)
                     /gene="rfbC"
                     /locus_tag="ACJJD2_000627"
     CDS             complement(8330..8869)
                     /gene="rfbC"
                     /locus_tag="ACJJD2_000627"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HGG7579215.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            complement(8924..9799)
                     /gene="rfbA"
                     /locus_tag="ACJJD2_000628"
     CDS             complement(8924..9799)
                     /gene="rfbA"
                     /locus_tag="ACJJD2_000628"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HGG7579216.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            complement(10012..11088)
                     /gene="rfbB"
                     /locus_tag="ACJJD2_000629"
     CDS             complement(10012..11088)
                     /gene="rfbB"
                     /locus_tag="ACJJD2_000629"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HGG7579217.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAG
                     NLKSLTEVADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEF
                     IQTNIIGTFNLLEAARAYRRQMPSEQREAFRFHHISTDEVYGDLHGTDDLFTETTPYA
                     PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLE
                     ELVPNKPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVE
                     WYLNNQTWWSRVLDGSYNRERLGS"
     gene            complement(11089..12132)
                     /gene="galE"
                     /locus_tag="ACJJD2_000630"
     CDS             complement(11089..12132)
                     /gene="galE"
                     /locus_tag="ACJJD2_000630"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HGG7579218.1"
                     /translation="MNKKYPKINYIGNKEKIASWICDQPPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQRYAEK
                     FYFHDECQQLDLYRKNIGKLDNQYKRALAFTLMRRAMIRKMPYTEDMRPGDTANPYGA
                     SKAMVERMLTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAS
                     GRLPQLSVFGGDYPTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAY
                     SVLEIIRAFEAASGLNIPYQIQPRRAGDLACSFADPSHTKQQTGWETKRGLKQMMEDS
                     WRWVSRNPNGYGD"
     gene            complement(12145..13125)
                     /locus_tag="ACJJD2_000631"
     CDS             complement(12145..13125)
                     /locus_tag="ACJJD2_000631"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7579219.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSVPDNFIFVAAKLPSSSRLVTPYRLYWQKLLLKVF"
     gene            complement(13156..15429)
                     /locus_tag="ACJJD2_000632"
     CDS             complement(13156..15429)
                     /locus_tag="ACJJD2_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HGG7579220.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQPQDVEAAAQGYLNENVPDTKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYRPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYKNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKKHGVKLIAIGNGTASRETDKIAGELVR
                     GMPEMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRNENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGTEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGAFQT
                     ASFAEGIHEIGDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(15494..16144)
                     /locus_tag="ACJJD2_000633"
     CDS             complement(15494..16144)
                     /locus_tag="ACJJD2_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7579221.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(16141..16938)
                     /locus_tag="ACJJD2_000634"
     CDS             complement(16141..16938)
                     /locus_tag="ACJJD2_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7579222.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(16938..18101)
                     /gene="ctrB"
                     /locus_tag="ACJJD2_000635"
     CDS             complement(16938..18101)
                     /gene="ctrB"
                     /locus_tag="ACJJD2_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HGG7579223.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(18116..19291)
                     /gene="ctrA"
                     /locus_tag="ACJJD2_000636"
     CDS             complement(18116..19291)
                     /gene="ctrA"
                     /locus_tag="ACJJD2_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HGG7579224.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            19418..20551
                     /gene="neuC"
                     /locus_tag="ACJJD2_000637"
     CDS             19418..20551
                     /gene="neuC"
                     /locus_tag="ACJJD2_000637"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0006047 - UDP-N-acetylglucosamine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase"
                     /protein_id="HGG7579225.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGIHMMKT
                     YGRTYKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGAAVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            20555..21241
                     /gene="neuA"
                     /locus_tag="ACJJD2_000638"
     CDS             20555..21241
                     /gene="neuA"
                     /locus_tag="ACJJD2_000638"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HGG7579226.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            21242..22291
                     /gene="siaC"
                     /locus_tag="ACJJD2_000639"
     CDS             21242..22291
                     /gene="siaC"
                     /locus_tag="ACJJD2_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HGG7579227.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFLDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYESLFGKIAA
                     CDIRKGAQIKKTDIE"
     gene            22375..23862
                     /locus_tag="ACJJD2_000640"
     CDS             22375..23862
                     /locus_tag="ACJJD2_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,8-polysialyltransferase family protein"
                     /protein_id="HGG7579228.1"
                     /translation="MLKKIKKALFQPKKFFQDSMWLTTSPFYLTPPRNNLFVISNLGQ
                     LNQVQSLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNIT
                     PKKLLYIYRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAP
                     LLESFSYHPTKLERYLIGNNLNIKGYIDYFDILHVPFPEYAKKIFNAKKYNRFFAHAG
                     GISINNNIANLQKKYQISKNDYIFVSQRYPISDDLYYKSIVEILNSISLQIKGKIFIK
                     LHPKEMGNNYVMSLFLNMVEINPRLVVINEPPFLIEPLIYLTNPKGIIGLASSSLIYT
                     PLLSPSTQCLSIGELIINLIQKYSMVENTEMIQEHLEIIKKFNFINILNDLNGVISNP
                     LFKTEETFETLLKSAEFAYKSKNYFQAIFYWQLASKNNITLLGHKALWYYNALYNVKQ
                     IYKMEYSDIFYIDNISVDFHSKDKLTWEKIKHYYYSADNRIGRDR"
     gene            24107..>24243
                     /locus_tag="ACJJD2_000641"
     CDS             24107..>24243
                     /locus_tag="ACJJD2_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7579229.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YL"
BASE COUNT         6408 a         5699 c         5710 g         6426 t
ORIGIN      
        1 atcagacttt agagcggatt aacaaaaatt aggacggaac atagggcgac gctttttgta
       61 tcgtcctgtg tgttgaaaca tcagcatagg aaacgcagga aaagacggct gttttgcgcc
      121 tgcgtaccgt attagtcaaa atgccgtctg aaaccgataa cagggtttca gacggcattt
      181 ccgtcaattt tccctttatc tgccgaacag gttggcgata ttttccatct gttcttcggt
      241 aaaaccgttc tcgcccaatc tggcggcaac tgcccattcg cccgacaaac cgtgttccgc
      301 accgagctgc cgccattttt cgactttggc ttcgtctgtg gttttttcgg gcagcggttt
      361 gacgggaatc ctgcttttgg ggacggtagt catcggtttg cccctaatcg atggaatagc
      421 cgcgaagata ctgtatccgt tcgcgcgtca tccgcgtgtc gcattgcagc ttgaggtatt
      481 cggcgtattc ctgccggtct gcctgcgcgg cggcttgtcg gcagttgctg attttttcct
      541 gcgcccactt gcgttgttcg ccgaccaact ctttttgcac gtcggtatcg agtcctcccc
      601 aaagtttggt aatttcggat tccgcacgct ggttttgtac gcgcgcctct tccacttcgc
      661 cccgtgatac ggtaacggta tcggcacgct cgccgtcgtc aggatgcagg atttccggtt
      721 cgggcgcgcc ttctgcggct tggggtacgc ccgcatcgcc gccggcggca ttgtgttcca
      781 aaatgtcttc gggcgtgggt ttggacggtt cttcttcacg ggcttttccg ctcaaaatcc
      841 tgaccgcgtc ttcttttttc accgccttgc cgtctatcat cacgatgctc ttcacgccgt
      901 aaggcagcaa cgcgacagac agcgtttgcg ccgccatacc gaccgtgttg tcgacaaatg
      961 ccgtctgacc gtctttgacg ggcaggaagc ggacggctgc cgtcaatacg ccgtctttaa
     1021 actcgacatt gccgcccgtc ttctgccgca caatatccga caaagcggtt tccccgtaca
     1081 gcagggggct gtttgccttg gcatcggcaa gcgtttcaga cggcacggta atgttcaaat
     1141 cggcgataca gaacgtgcgc ccgccttcct gcgtttccga agcgtgttcc aaagaaaacg
     1201 ccaaaccgta ggcggcggcg ataattttgt cggcatcgac aaactgcctg ccgtcttcgc
     1261 gcgcgaaaga acgcgcttcc tgcgtgagcg tttcctgaat attgccgcgt atgccttgca
     1321 acacggcggg gttggcgcat tccaatgcct tgggcggttc ttccctgccg caagcggcaa
     1381 gcagcagggc aaacggcagc gcaatgagtt tccgatacat gatgttcctt ccaaacggtg
     1441 cagaccgata gcggctatca tagcaaaagc acctgcaggc ggtaaacctt gcaggtgctt
     1501 tgtcggaaag gcggaaaatc agcctttaaa gaaattcaca aaaccggtga gaatcgcggc
     1561 attaatcaaa tcgacgaaga acgcgccgac cataggcaca atcaaaaacg ccttatgcga
     1621 cgcgccgaaa gtatgcgtga cggactgcat atttgccacc gccgtcggcg ttgcacccaa
     1681 gccgaaaccg caatggccgg cagccaatac tgccgcatca tagtcgcgcc ccataaagac
     1741 ataggtaaca aaagtcgcgt acaaaaccat caccacggtt tgtacggcaa gaatcacggt
     1801 tacaggcccc gccaaaccgg tcagctccca cagtttcaaa ttcagcaacg ccattgccaa
     1861 gaaaagcgaa agcgaagcat tgccgaacac atcgatggcg cggtcgaaca tattgacctt
     1921 gaatgcggca gtgaggatgt tgcggatgac cacgccgcca aacagacacc acacgaattt
     1981 gggcaggtcg aacagatatt ctttgtcgaa gccgtccata atctcggcaa acgccaaaca
     2041 cgcggcaaac atggcaagcg tttcaacggc agattccgcc gtaatcaggc gggtgcgttt
     2101 tgcctgctcg aacacgtcgt ccgcgttgtc gtcctgatcc tgttttttgt tttcaaccgg
     2161 tttgcggccc attttgttga tcaggcggcg cgcaaccggc ccaccgatca ggccgccgaa
     2221 caccagcccg aaagtagccg atgcaatacc caaaccggtt gcgccgacca agccgtattg
     2281 cgtttcaaaa ttaggtcccc acgcacctga cgtaccgtgt ccgcccgtca gcgacaccga
     2341 accggtaatc agaccgatga gcgggtccaa acccaaagcc gtagccagtc cgaccccgac
     2401 aaagttttgc accaagataa atccgcccac aatcgcggta aaaaccacta gcggcaaacc
     2461 gcccgccttc aaacgggaaa aatccgcgct caagccgatg gacgtgaaga aaatcagcat
     2521 aaacgcattt tgcagcggtt tctcaaattt gaagctcacg ccgtacgcct cgtgcagcgc
     2581 aaacaggata atcgcggcaa ccaaaccgcc agcgaccggc tcgggaatat tgaagtctcg
     2641 taagaatttg attttttgaa ccagaaattt accaaccagc aacacgagcg tggcggcaat
     2701 cagtgtgtaa taactgttga attcccattc catgttgttt cacctcctag aaatattttt
     2761 ccgagcatcc gtttttgttc cggatgtagt gtgtttcaac gcttggcgtt atccgccgag
     2821 tgtcatggta ttgatgcgcg gacaaggtgt tttcagaaag aaatgaaaac aatggcgtgt
     2881 ccgtgaaaaa taactggcaa atattagggg aatagttaaa gattgtcaaa aaatgcgagt
     2941 gtaaatcttt tcagacggcc ttttgtccga tggcatggtg tgcttcgcgt cgccattgtt
     3001 ctaataggga tattaatgat tcggccgaag tgtggccgtt gctgatggca gcctgcagcc
     3061 agtagcaggc ggtcggaaca tgacagccga caccttgtcc gtgatagtaa aaacaggcga
     3121 ggtggtattg ggcggaaggg tggttttgtt cggcagcgat ggcgtaccag tgtgcagccg
     3181 cccgaggatc ttgcgccgta ccgaggccgt aatggtagat gcggcctaag gcagccgccg
     3241 cgtttttatg gtggaactca gcagcttcca tgtaattttt gcgtgcggca ttatagtcgg
     3301 cgggacgacc gatggcatgg gcttgtgttt ccgccaaacg gtagatggtt tcggtttgtt
     3361 gctgttgcag ggcggcagtt ttgatttgtt cgtattgttg cggatggtac agcgcggcgt
     3421 cgctgatgag tttttgtgct gcggcggcag aacccagcgc ggcagcacgg tggtagtaat
     3481 cgtgcgcgat atggttgtca gctttgatgc cgaggccgta gcggtagagg tcgcccatga
     3541 ttttcagggc ttcaggatgg tttttctcgg cagcggcttt ggcatagcgc gccgcttgga
     3601 acggatcgcg ttcggaaagt tcgccggtca gggcgtattg ggccagcttg gcttgtgctt
     3661 ccgcttgctc cttattggcg gcacgacgat accattctaa ggcttcgggt ttgcgttggg
     3721 cggcaagaag gtcggccagc agggtttgtg cggcgatgtg gccggcttgt gcggctggtt
     3781 cgagatagtg ttcggcttgt gcgtggttgg ggctgacacc tgtaccgtag aagtagattt
     3841 gaccaagttg ccagcaggcg gcagttacgc cgagtgctgc cgctttttcg tattgttcga
     3901 tggctgtttc aacgtcgcct tggcgttgat gatggcgtgc cagatggtaa tacgcaggtg
     3961 cggcatatcg ggcggcagca agttccgccc agtagagcga ttgtggatcg ttgcgttgcg
     4021 cgtggtaacg catgaggatt aattgggctt ctgagtgccc ctgctcaccc agccaggcat
     4081 agtcgttgag aagctgtccg gtcggggtgc cgttgtgttc gcgttgttgc agcagggaga
     4141 agagtgcttt gggatggcgt tgggccgcgg cggcttccaa ccatgaaagt gcctgctccg
     4201 gttggccgtt ttgcagcaga tggttgccca atacgaaagc agcttccgca taaccttgct
     4261 ctgccgcctg ttgcaacagg ggcagggctt gggcggtatt ggattgttcc aaaagggcgg
     4321 cggcttgccg gtagaggata tcaggagcgg cggtcatggt ttgcgggcgg atataaagtg
     4381 gaagacggat gctgcggcat atgggcggcg ataccggttg agggctttgt aaaaatattg
     4441 ctcgccacag ttttgtaaag tgtattgcct tgctggctta tctttaggat gtttggcttg
     4501 ttatattgtt ttgcctggga gtacatccat attttgtgtg ttattaaggc ctcagcttga
     4561 gtcggtatgc gctcatggca gctcggtcat tatactgttt ttgtaattta ttgttaatga
     4621 taaatgcaga tttttgtgtt ttatttacat ggcagtagct aaggtattga ttgtttcagg
     4681 ccgtctgaaa tgttttcaga cggcctgaac ttccttcgct aagtcagatt actggtgtgg
     4741 aagagttgga ggtttttttg ttggggaaaa acacctgact gtagaagttg ccgttaattt
     4801 gggtcacgtt gaggtggtac attcggtagg catggaacag ctctttgtca ggcggtgtcg
     4861 gatgattcca aaattctgcc aaggtatttt ggtcagtaat gccgggaata tcataatagg
     4921 cacggccgag aaccttaact ggcatattgt gaatcagtcc ggacaggccg ctggtgctgt
     4981 tgatggtgac catgccgaga ccgtggcgca ggaaaacggg cagggggaca tcatggacat
     5041 aaatcacgcg gcctttgagt tcggggtgtt ctttgataaa gcgtttaatg tcgcgccagt
     5101 agtcgataaa accgcggtcc atcggatgat gcttgatgat gatgttggta tcggcaggcg
     5161 cgtgctcggc aaatgaactc aaaacatgga gcaggaagct gcggacgctg ggaaagtcgc
     5221 aatggatacg gacttggctg tcgttgaata cctgtaaggg aacaataaaa aacttgccgt
     5281 atttgcctgc ttccacacgt ttggcgattt ggatgtcttc aatatagtag ttcaaacgct
     5341 tgaggatgga gagcgaccac ggtttgaggt aatggccggc attgggtgcg cggtggtgga
     5401 tgtagtcggg gtatttgcgt ggattgcgga acaactcgat atagtaacgg atagcgtttt
     5461 ttgccatggg cgtaaaaccg ccgtgtaccg gcgttggcgc tttatattct tgctgggcaa
     5521 gcttagggaa ttgttcaaga aaaaagtcgg cacggcgcgg caacggggaa aatgcgttga
     5581 cgccgtcttt ttctaaggtg atgtagtagg ggcggaaata gccttcttca aacgcccaga
     5641 aactggcttg gttttcgttt gcaatgcgtt ttgcaatgac gtgataaggg cgtgtgtcgc
     5701 caaagcagac aacggcctgg atgtgatgtt gagtgatgta ttcttgcaaa aactcaggaa
     5761 aggcatcgta gttgtcgtta aaaacaacgg tatgcgcttg agtgggcgga taaaaatagt
     5821 cgtcgcctgc attaaagttg aatttatgta cggttttgcc gtttgcagtc agccagtcgg
     5881 caaggcgcag aaaaaaatcg ccgacagggc cttgaagcag caggatattt tctgcgcttt
     5941 caagcaggtt ttgcaggtta tttttgagga cggtctgttt catgttgcaa tgtggttttg
     6001 ttttttatgt aatagtttta ggttgaactt tcaagcatac gccaagagaa ttaacgatgc
     6061 aaaggcaatg atgccgcaat agaggcaagt ttatgacgca tcgttaactt tgatggtatt
     6121 tatttgaaag atcgatatag ttgtttgatt ttacctaatt ttttggcaaa gtacccgcga
     6181 tgtaatccgt tgttgttttt ttgcatattt ttttgtcgta tcaggatttg ggctgcggtt
     6241 tctgcattta tggcctgatg ggtttcgggg tggatgtagt cgggatagtg gatgagcgtg
     6301 ccggcaatca gctgccaaag ctcaagtctg cggctacggc gcggaatggg gagcagatct
     6361 tgggtaagtc cccagcctgc gtaaaaaggc aggccgtagc agctgacttt tttgccgcgc
     6421 aacaaggctt caaaaccggt cagcgaagtc atggtatgta cttcgtctgc gtattggaga
     6481 caggtcagga tgtcggtttg ctcggcggtt tggtcggcat atcgtgcagc atcttcaggg
     6541 gaaatatggc cgatgcggtt accgctgact acatcgggat gcggtttgta gatgatatag
     6601 gcattggggt ttcgttcgcg tacggtacgg agcaaatcca gattgcggta gatttggggc
     6661 gaaccgtagc ggatagacgc atcatcttca acctggccgg gaacgaggat cacggttttg
     6721 tcggttgacg gggcggtgaa gtctgagctg ccgacgttgt atttactgat gtggttttcg
     6781 gtcagcattt tttgcagctt caaggccgtc tgaaagtctt gatcgtcgaa gttttggttt
     6841 tgtaggatgt attcaagacg ggacggggtt tcggcattga aataaatgct catatcgtcg
     6901 gtaacgagcg acagcggcgg cactaagttg gagccgagtc cgaccgagcg gataaagccg
     6961 tcttccatgc gcagcagggg gatgtggtgt tgttcggcaa agcggacgat ggcctctttg
     7021 ccgttgcccc aggcaaggat gcgtgcatcg tcggacagtt tgacccctgc cagtttttgg
     7081 gtggaagaga taaatttcag acggcaagag ggtacgttaa agaacggttt ggcaaccgcg
     7141 cgtttccaca aagacatacc aacgcaatac aactcgccac gcaatttgtc gtttttgcgt
     7201 ttgaccgtcg ccagatagtc gatgacatca aagaggctgc ctgcttcgcc ggtattgggg
     7261 ttgaggtagc ggctgtattg cagataggct gcagcgaaga gctgcagcaa gttgcggggg
     7321 gcgcggcgtt gggtttgaac aaggctgtcg attttaggat ggcggtcgtc actcacgccc
     7381 catccggcat accacggcaa accaaacgtt accaaaggct tgccgcacaa caaggcttca
     7441 aaacccattt gcgaggtcac gcaatacact ttgtccaccg cttgcagcag cgaaatcgga
     7501 ttaatgtctt cagccaataa acgcacacgc ggctgctgtg ccaaatcagt aaggtaaccc
     7561 tgtttcttgc cgctcaatac atcgggatgg gttttgaccc agatttccgc atcaggattt
     7621 tcggctaagg ccgtctgaaa catttggcgg aatgtggctt catctgcgcc gccatattga
     7681 atcgccatat cgccgaaagt ttgatcaatt accaaaacaa tgtttttgct gtcttgtacg
     7741 aggccgtctg aaaaatccag agcatggtta tatttagaca aacggtgcgt caaaatcaaa
     7801 tcaatggcct gctgcgcttg gttaagcatt tcagacggca tgtttgcggc taaaatcaac
     7861 tgctccaaac gcgatgggcg ggttgtgtcg taatagatgc cgatatcgtc gtaaaccagt
     7921 gcgaagggcg gataaccggc cacgcctaag cccagtgagc gtaaaaaacc gtcttccaag
     7981 gctacaaacg gcaagccatg tgattgtgca aaagcacgtg cttggtgggt ggtcgggcgt
     8041 aagccccagc caatgatggt ttgggcgttg aatacggttt tgttaagtga atattccggt
     8101 agaaattgcg taatattcgg aattttacgt ataccgaaag agcgaagagg aatgtaggca
     8161 ggaatcacaa taaataggaa aaaatattac tgacaatata atatcttatt aacagatttt
     8221 gtgtaaattt tctgactatt taaatatagt agaaatttag ttagtaggct agctggtaaa
     8281 aattaggtca tcttgctaca aattacccac gatgacctaa aagtgaaaat taaaatgtgg
     8341 ccgcttcagc aagcatcttg cctgccaaat ccttggccga taggcttggt tctcccaata
     8401 aaggccagtc gattcccact gtggcatcat tccaaattag ggaatgttcc gcattcgggt
     8461 tgtaatagtc ggtgcatttg tagacgaatt ccgcttcatc gctcaacaca taaaatccat
     8521 gggcaaaccc ttccggcacc cataattggc gtttgttgtc tgccgataaa acctcaccga
     8581 cccagtggcc gaaagtagga ctatcacgac gcatatccac ggcaacatca aagacttcgc
     8641 ctgataccac gcgcaccagt ttgccttgtg tattttcggt ttgataatgt aaaccgcgta
     8701 atacgccttg ggtggatttg ctgtggtttt cctgcacgaa agtgcgctcg gctacatttt
     8761 ggcggaacca ttcatcacgg aaggtttcca taaaaaaacc acgctcgtca ccgaagactt
     8821 tgggttcgag caatttgaca tcgggaatgc gggtatcgat gatattcatc atgttttcct
     8881 aaaaagcgtt tcagacggcc tgaaaactgg taaaagcaac ctcttaatct ttgccaacca
     8941 agcgcaataa atagcggcca tattcatttt tacacattgg ctttgccaag tttctgattt
     9001 cttcgctgct caaccagcca ttacgccatg cgatttcttc caaacaggcg acttgtaggt
     9061 tttgaatgtt ttcaatggtt tcgacaaacg aggctgcttc caacaggctg gcgtgtgtgc
     9121 cggtatcaag ccatgcgaaa ccgcgaccga gcaattggac attgagcgaa ccatcgtcca
     9181 aatacatttg attcaaggtg gtaatttcca attcgccgcg ttcagacggc ttcacttgtt
     9241 tggcaaactc gactacgcga ttatcgtaga aatagaggcc ggttaccgcc caatcggatt
     9301 taggttgttt cggtttttct tcgattgaca gggctttgaa attctcatca aactcaatca
     9361 caccgaaacg ctcgggatct ttcacttgat agccgaatac ggtagcacct ttggtttcca
     9421 cggaagcggc ggcttctttc agggattggc tgaaatgctg gccatagaaa atattgtcgc
     9481 ccaacaccaa acacaccgaa tcatcgccga taaattcttc accaattaaa aaggcttgcg
     9541 ccaaaccatc ggggctgggt tggatggcgt aggaaatttg aataccgaaa tcgctgccat
     9601 cacccagtaa gcggcggaaa gcatcgttgt cttcgggggt ggtaatcacc agcacatcgc
     9661 ggattccggc caacatcaac accgacaagg ggtaataaat catcggtttg ttgtacaccg
     9721 gtagtaattg ctttgatacg ccgcgggtaa tcgggtaaag gcggataccg ctgccgcctg
     9781 cgagaataat gcctttcatc agtttacttt ccttatgtag tttttcaggc ggccttcatg
     9841 ccgtctgaac gtatttttat tatttgaggc ctttgcaaag ccacagattt gagtacagtt
     9901 cgaagttata gcagcgcaga aagcgcagac atatcacaaa gataggcaag ctttcgagca
     9961 gcgcataacg aagaaatgtg ccaaagatgg ggagtttgca aaggtctcta tttaactgcc
    10021 taagcgttca cgattgtagc tgccgtctaa cacgcgcgac caccaagttt gattgtttaa
    10081 ataccattcc actgttttgc ggatgccgct ttcaaaagtt tcttgcggct gccaacccaa
    10141 ctcacggccg atttttgcgg catcaatcgc atagcgcaca tcatggccgg ggcggtcttt
    10201 gacataggta atcaaatctt cataacgcgc cacgccttgc ggtttgttcg gcaccaattc
    10261 ttccagcagg gcgcaaatgg tgcgcaccac ttcaatattg gctttttcat tgtggccacc
    10321 aatgttgtaa gtttcgccga tttcgccttc tgtgaccact tgatacagcg cacgcgcatg
    10381 atcttcaaca aacagccagt cgcggatttg cataccgtcg ccatacaccg gcagtggttt
    10441 gccatcaagc gcattcagaa tcatcagtgg aatcagtttt tcaggaaaat gataagggcc
    10501 gtagttatta gaacaattgg tcacaatggt cggcaggccg taagtacgca gccatgcgcg
    10561 caccaaatgg tcgctggagg ctttggaagc cgaataagga ctggaagggg cgtaaggcgt
    10621 ggtttcggta aacaaatcat ccgtgccgtg caaatcgcca tagacttcat cggtggaaat
    10681 atggtggaaa cggaaggctt cgcgctgttc agacggcatt tgccgccggt aggcgcgcgc
    10741 agcttcaagt agattgaacg tgccgatgat attggtttgg ataaattctc ctgcagaatc
    10801 gatggagcgg tcgacatgac tttccgccgc caagtgcatc acggcatcag gccggtgttg
    10861 tgcgaatacg cggtcgagtt cggcgcggtc gcaaatatcc acttgttcaa aagcatagcg
    10921 gggattatcg gctacctcgg tcaaagattt caaattgccg gcataagtca gcttatcgac
    10981 attgacgaca gcgtcccggg tgtttcggat aatatggcgg acaacggcag aaccgataaa
    11041 gcccgcgccg ccggtaacga ggatggtttt tttgtttgcg gtttgcattt aatccccata
    11101 tccgttgggg ttgcggctga cccaacgcca cgaatcctcc atcatttgtt tcaaaccgcg
    11161 tttggtttcc cagccggttt gttgtttggt atgggacggg tcggcaaagg aacacgccaa
    11221 gtcgccggcg cgacggggtt ggatttgata gggaatattt aagccggatg cggcttcaaa
    11281 ggcacggatg atttccaaaa cggaataggc gcgccccgaa cccaagttga acaaatgtac
    11341 gccggcaaca ccgcctttcg ccttcattgc cgcgatatgc ccttctgcca aatccatcac
    11401 atgaatatag tcgcgcatac cggtgccgtc gggggtcgga taatcgccgc cgaataccga
    11461 cagttgcggc agcctgcccg aagccacttg gcagatatag ggcaaaaggt tgttgggaat
    11521 gccgttgggc tgttcgccga tcaagccgct ttcatgcgcg ccgatcgggt tgaaataacg
    11581 caacaaaatc acgctccaac gcggatcggc tttttggatg tcggttaaca tccgttccac
    11641 catcgctttg gacgcgccat aaggattagc ggtatcgccc gggcgcatat cttccgtata
    11701 gggcatttta cgtatcatgg cgcgacgcat taaagtaaac gccaaagcgc gtttatactg
    11761 gttatccagt ttccctatat ttttacggta caaatcaagt tgttggcatt catcgtgaaa
    11821 atagaatttt tcggcataac gctgactcat aaaaccggca tgcgggctgc ctgaaaaaat
    11881 cattgcgaca tcatcgtcat ttaatgtttc atggttgttt tctattaatg ctaaagcaat
    11941 ttggtaatta attgccaaaa tatcgttagt aatcacacga tagccgcgtt ttttggcttc
    12001 ataggcaaag gaacagcctc cactaaatac atctgcaact gtatctacat cagacggagg
    12061 ctggtcacaa atccaggaag ctattttctc tttattaccg atatagttaa ttttcggata
    12121 tttcttattc attttcactc atttttaaaa tactttcagc aatagctttt gccaataaag
    12181 gcggtacggc gttaccaacc tgctgctgct gggcaatttt gctgccacaa aaataaaatt
    12241 atcagggaca gattgtaagg cagctaattc acgaacggtt aaagcccgat tctgttcata
    12301 gtgaaaaact ttgcgcatat ctcctgtaat acaaacggct ggtttgttgc tgttgtaacg
    12361 gatgtattta cggatatcac ctgttttcgg acgtaatggt tcaggaatat cgttacggtt
    12421 acctccattt ttaacaaatg ccattttttc taacatttgt gccgaatgat tcatagcttc
    12481 atgatttgca acgtgtggat tgctttcgcc agcagccagt tttggaaaat gtcctattgc
    12541 tgatccaaca gtctgatggg aaatctgcaa aggttcggga aaggaaattt tgcctttatc
    12601 cctcctcccg ataaatatca ctcggctacg tatctgagga acaccgaaat cggctgcact
    12661 cagtatctta cattccaccg aataaccgat attctgaaat gcttgaataa tctcaatacg
    12721 tgttttacct gaattgtgtg tatagagtcg cgctacattt tccataacaa aaaaatatgg
    12781 ttggacaatt ttaactattc ggacaaactc tttaaataaa tggttgcgtg ggtcatctgt
    12841 aaatgtccgt ccaatctttc ctgccatact aaaaccttga caaggtggtc ctccaataat
    12901 caaatcaact gcttgtccgt taagacaatt gattaaatct tgttcggtta gtgtggttaa
    12961 atctttttgc agtaattgat gatgggggaa gttggtacgg taagtctgac aataatcaga
    13021 ctccatttca acagaaagca attgttggaa tccggcttgt tcaaaaccca aggataggcc
    13081 tcctgctcct gagaaaaggt caatataggt aagtggtgtg tgcataagtc aaaatccata
    13141 aactcttcga ttattttacc gcttcagctt cgcaaacgca tccgccatcg ccgaattggc
    13201 tggggcgcgg tcgttgcgtt ggggtttgcg gccggctgtc cgttcgcggc tgcggttttc
    13261 agacggcatt ttatgttttg cgccgcccgg ttcgtcatcc aagcgcatgg tcagcgcgat
    13321 gcgttttcta gcggcatcga cttccagcac tttcactttc actacatcgc cggctttcac
    13381 cacttcgcgc gggtcttgga cgaatttatt ggatagggcg gagatgtgca ccaagccgtc
    13441 ctgatgcacg ccgatgtcca cgaacgcgcc gaagttggca acgttggaaa ccacgccctc
    13501 taaaatcata ccgacttgca agtcgccgat ttcgtggatg ccttcggcaa acgatgccgt
    13561 ctgaaacgcg ccgcgcggat cacggccggg tttttccagt tcggacagga tgtccaaaat
    13621 ggtcggcagg ccgaagcgtt cgtcggtgaa gtcggacgct ttgatttgct tcacgcgctc
    13681 gcggttgccg atgagttcgg cggcgctaat gccttgttgc gccagcattt tggcgacgac
    13741 gggataggct tcggggtgga cggcgctcgc gtccaacggc tctgtgccgc cgttaatccg
    13801 caaaaagcct gccgcctgct cgaaggtttt ttcgcccaaa cgcggtactt tcagcaattt
    13861 tttgcggctg tcgaacgcgc cgttttcatt gcggtaggcg acgatgtttt gggcaagggt
    13921 ctgattcaaa ccggaaatcc gcgccaagag cggggcggag gcagtattca cgtccacgcc
    13981 gacggcgttc acgcagtctt cgaccaccgc gtccagcgat ttggcgagct ggctttggtt
    14041 cacgtcgtgc tgatactggc ccacgccgat ggatttgggg tcgattttga ccagctcggc
    14101 aagcgggtct tgcagcctgc gggcgatgga caccgcgccg cgcagggaaa cgtccaagtc
    14161 ggggaactcg cgcgctgcca gttcggacgc ggaataaatc gacgcgccgg cttcggaaac
    14221 gacgattttg tgcagcccca tttccggcat tccgcgcacc agttcgcccg cgattttgtc
    14281 ggtttcgcgg ctggcggtgc cgttgccgat ggcgatgagc ttcacaccgt gttttttaat
    14341 caggcgcgac agcgttgcca acatattgtt ttcttgatgt aaatagacaa tgacggtatc
    14401 cagcagcttg cccgtgtcgt ccaccacggc acatttcacg ccgttcttgt atccagggtc
    14461 tagacccaaa gtggtcagcc gtccggcggg tgcggcgagc agcaagtctt tgagatttcg
    14521 ggcaaacacg gtaatcgcgt cggtgtcggc ggcttctttc aaacgattta gggcttcgag
    14581 ttccaacgac aaaaagattt ttgcgcgcca agtcagacgc acggtgtcgc gcagccattt
    14641 gtggccgtct gaaaccttga aacggcgggc gatgatttgc tcgtattcgc tttgctgcgt
    14701 aatcggcgtg tcgtcgggcc ggtatttgag cgcgatgttc aacacgcctt cgttgcggcc
    14761 gcgcaaaacc gccagcgcac gatggctggg catcgcacga ataggttcgc ggtggtcgaa
    14821 ataatcgctg aatttttcgc cttcggtttc tttgcctcca acgacttgcg cgtggatttc
    14881 ggcttcgttc cacaacttat cacgcagcgt gccgatgagt tccgcgtctt cggcaaactg
    14941 ttccatcaga atcgcgcgcg cgccgtccaa tgcggctttg gtgtcgggga cgttttcgtt
    15001 caggtagccc tgcgcggcgg cttccacatc ctgcggctgc tcggcaagca acacgtccgc
    15061 cagcggctgc aaaccgtgtt cgcgcgcgat ttgcgctttg gtgcggcgtt tgggtttgta
    15121 gggcagatac aggtcttcca gcgcggtttt gttatcggcg gcttcgattt gcgccctgag
    15181 gtcgtctgaa agcttgcctt gctcttcaat gctttttaaa acaacggctt tgcgctcttc
    15241 caactcgcgc aggtattgca gccgctcggc aagccggcgc agctgcgtat cgtccaaccc
    15301 gcccgtggct tccttgcggt agcgggcgat aaagggcacg gttgcgccgt cgtccaaaag
    15361 ctcgatagcg gcattgattt gcgcggtagt cgcggaaagt tcttgggaaa gaatttgagt
    15421 aatgttcatc aataaaattc caacggacag gccgtctgaa atttcagacg gcctgattta
    15481 aaaaacaatc gctttaaggt agcgaattat aatattcgta ggctttgtcc atatcttcaa
    15541 actggtgcat atgccctttt tccagcacca tcgcattatc gcaatattgc ttcatggcgc
    15601 tgtggctgtg cgacaccaag atgatggaac ggtctttgcg cttttcaaac aactcgtact
    15661 tacatttatc ggcaaaacgc gagtcaccaa ctgcaatcac ttcgtcaatc aaatagcaat
    15721 caaactctac cgccaacgac aaagcaaatg ccaaacgcgc cttcatacct gaagaataac
    15781 gcttgaccgg ctcgtaaaga tattgcccca actcggaaaa ctcttcggta aagttcttca
    15841 cataatcgat atcgacattg taaatccggc agatgaaacg caaattgtcc ataccggtca
    15901 gactgccttg aaacgcaccg gagaatgcca aaggccaaga aatactcatt gtccgcttga
    15961 tttcacccgt ggtcggcggc tcaacgccac tgatcaaacg gatgagcgtc gatttacctg
    16021 caccgttgcg gccgagaata ccgattttct cgcccttctc cattttgaag ctaatatcgt
    16081 gcaagactgt ccgccaacct tggcgggtca gatagcgttt ggaaacgtgt tcaactgaaa
    16141 tcattgcggc tcgactcctt tactgaattt actgaccatc gccaagccaa acaacaacaa
    16201 caccagattg cacaatacga tataccaagg attttcatag gtaattacat cgctgccaaa
    16261 atatccggca cggaacattt ctgtgccatg caccatcgga atcattaatg catattcttg
    16321 taccttgggc ggcaaattat gcacaaaaaa gaacgcaccg gataacggca tcatcacaaa
    16381 agtcaatgtg ccccaaatct tgccaaacgg ctcgaaatta aaggcaatcg aacaaatcac
    16441 caaacccaaa ccaatcgcaa aaaaagccat caaaagccaa gccatcagca tataaaacat
    16501 atctgccggc atttcaatcc agccaatcgc aatcaatacc gccataatca caatctgcgc
    16561 aatggttgca ccagcaattt ccaaaatcat gcgcgccaag atggtatcca aaactcttac
    16621 attgcggtga taaagcaagc tggcatttga agaaatcgac ccaactgccc gttttgaggc
    16681 attacgccac atcatcaaca tcggatagcc agtaatcgca aatgcgacaa tattcaaagt
    16741 tgaatatcgg tctgccctta aaaatttcca catcaagacg ataacgaatg tcatcagcaa
    16801 cggctcaaca aacagccata aaaagccaat attattgcga ccgtaacggg tgataatttc
    16861 ccgcatcaac agcgcaccga ttacgcgcct ttgaatggct aaagattccc aaaatgatgt
    16921 tttatgcaag gctttcatca gtttttatgc tcacgaatgc tggcagtcaa caggctcaaa
    16981 ataccataaa ccatcaagcc gataatcaga gtggcaacaa tgttgtataa ccgtttaggc
    17041 tcatgtgcca aatccggcag gctcggttgc gagatcactt ccaaataaag ctgctgacgg
    17101 tctgcttcaa ccttggcact ttccaaagaa gtcatggcgg ctgccaactg ctgctctgcc
    17161 aactggtttt ccaaatacac acgctgatat tcggcagcct gattagacaa cgaagaatgc
    17221 ccaccgcccg aaatggcacg taactgttgg tcaatttctt tacgcaagct ctgctcacgc
    17281 gcctgcaaac ccggaatctg cggattctcc ggagtgactg ctttcacctg atccagctgg
    17341 gtttgaatca caatcaattc atcttgcagc ttggaaacca accccatttg cacttccgat
    17401 tgcgctttca aatcaaaaac gccattggca atccggtaat ccgtcagatt ctgagaggct
    17461 tcctttaccc gctctgccgc cgttttcact acttcttccg catagcgcac cgtatcagca
    17521 cgtgcacgat cgttcaactg gttaatcaat gcttcacctt gttttaacaa agcctcattg
    17581 attttcttag attccagcgc atcaaaggaa gttacattca acgtggaaat acccgaaacc
    17641 gtatcaaaat tgatcatcac ctgattttta tagtattgat aaaaagcctc ttcctcgcca
    17701 cggaacccaa acccattaaa gcggctgaac gcatcacctt tggtttcata aaactcacgc
    17761 accggcaaga ttttacgcag ttcatccaaa gacgagcgcg aacgcatata ctccccaacc
    17821 gtgtaaatat catcttgcgc acgggcaaaa cctgtgccct gcaaaatggc acccaggcca
    17881 ttgagagaag attggctttt aggcgagcgc accacaaagc tcgattgcga cgtaaaacga
    17941 tcggaagcga agaagccgaa atacaccaac gaaattaccg tagggataat caccgttacc
    18001 caaaataaag ggcttagctt tttaatccaa cttttctttt tcggcttttt acgctcggct
    18061 ttggtttcag tggcaactgc cacaggaagt tgctcagaca tcttaattac tcacattaat
    18121 tagttaaatt attaatactg ttcgcgccac tggtaaccgg cgagaacaca aacgacaaaa
    18181 atttctgcac ttcagccaac ggcgcattcg acacatacaa tacatcttta ttcttcacag
    18241 gaaagcgctg catagaaaat agcgaatgcg catcagccat attcacacga tataccgttg
    18301 gaatctctgc ctcactgcca taaccttgag caatccattt atcctgacgt tctgccggca
    18361 attccaccaa tggcgtatag cggaacacaa acacaccacg cgcatcagaa cggcgatctt
    18421 gcaaaccgcc catacggcca atggcttcag aaagcgataa gcctctggct gaaaaaccga
    18481 tttcttgtgt tctccccacc gcacccatag acgtaaaggt atagggattg gtaatcatgg
    18541 taaccacatc accgcgacgc agcaaaatat tttgtcgcgg atttgcaact aaatcttcca
    18601 aggcaacagt tcgtactaca ttgccacgtg tcagctgcac attcgtatcc tgcacatttg
    18661 ccgttgaacc acctaccgca gccaccgcat ccaacacacg ctcaccggct gccgtcagcg
    18721 gcatacgcac actattccca gcacgaatca ccgacacatt cgccgcatta ttctgcacca
    18781 aacgcaccat cacttgtggc tgattggcca tttttttcag gcggccttta ataatttcct
    18841 gaacctgacc aggcgtttta ccgaccaccg aaatatcgcc aacaaacggc acagaaaccg
    18901 taccacgtgc cgtgaccaac tgctctggca acttagtttg atgcgcacta cccgagccca
    18961 tcgaagaaag gccaccacca aacaatactg ccggcggcgc ttcccaaatc ataatatcca
    19021 atacatcacc aatatttagc gtaccagccg aagcataacc atcgccaaac tgagtgaatg
    19081 actgatttat ctgagcctta tataataact gagcaaccgt atgattcaca tcaatcagct
    19141 ccacttcagg aatttgaact tcagattgtt gccctaaaga gacaattttt tttgcgctgg
    19201 ggcctgatga aggaatcgca gagcatccta caattaaact tccacacaat aataatactg
    19261 cgtgacgaat ataaaatttc actttaaaca caagccaaat cctaatataa ttataaatgg
    19321 cctaattata gcacttaatc gaaataaatt tatgagtacg tagagtataa ttagtattct
    19381 tctttccaac ttccttatac ttatagattc taaaatcatg aaaagaattc tttgcattac
    19441 aggtaccaga gccgacttcg gcaagctaaa acctttatta gcctatattg aaaatcaccc
    19501 agaccttgaa ttgcatttga ttgtaactgg tatacatatg atgaaaacat atggcagaac
    19561 ctacaaggaa gtaactcgag aaaactatca acatacatat ctgttttcaa atcaaatcca
    19621 aggtgaacca atgggtgccg ttttaggcaa taccattacg tttatctctc gtctatctga
    19681 tgaaattgaa cctgatatgg tcatgattca cggcgaccgt ttagaagcac tagcaggcgc
    19741 agctgtaggt gcattaagca gccgtttagt ttgccatatc gaaggtggtg aactatctgg
    19801 tacagtagat gactccattc gtcattctat tagtaaactt tctcatatcc acttggtagc
    19861 aaatgaacaa gctgtcactc gcctagtgca aatgggagaa aaaagaaagc atattcacat
    19921 catcggctcc cccgatttag atgttatggc ctcttccacc ctcccatcct tagaagaagt
    19981 caaagaatat tacggtttac catacgaaaa ttatggtatt tctatgtttc accccgtgac
    20041 tacagaagca catttaatgc cacaatatgc ggcccaatat ttcaaagcat tagaattaag
    20101 tggccaaaat atcattagca tctaccctaa taatgacact ggcactgaaa gtattctgca
    20161 agaattatta aaatatcaat ctgataaatt tattgcattt ccttccattc gatttgaata
    20221 ttttttagtc ttattgaaac atgctaaatt tatggtcggc aactcaagtg caggtattag
    20281 agaagctcct ctctacggtg tcccttcaat tgatgttggt acacgccaaa gtaaccgcca
    20341 tatgggaaaa tctattattc atacagatta tgaaactaaa aatatctttg atgcgattca
    20401 acaagcatgc agtttaggca aatttgaagc agatgatacc tttaatggcg gagatactcg
    20461 caccagcaca gaaagatttg ctgaagtaat caacaatcct gaaacgtgga atgtttctgc
    20521 tcaaaaacgt tttatcgatt tgaatcttta aattatggaa aaacaaaata ttgcggttat
    20581 acttgcgcgc caaaactcca aaggattgcc attaaaaaat ctccggaaaa tgaatggcat
    20641 atcattactt ggtcatacaa ttaatgctgc tatatcatca aagtgttttg accgcataat
    20701 tgtttcgact gatggcgggt taattgcaga agaagctaaa aatttcggtg tcgaagtcgt
    20761 cctacgccct gcagagctgg cctccgatac agccagctct atttcaggtg taatacatgc
    20821 tttagaaaca attggcagta attccggcac agtaacccta ttacaaccaa ccagtccatt
    20881 acgcacaggg gctcatattc gtgaagcttt ttctctattt gatgagaaaa taaaaggatc
    20941 cgttgtctct gcatgcccaa tggagcatca tccactaaaa accctgcttc aaatcaataa
    21001 tggcgaatat gcccccatgc gccatctaag cgatttggag cagcctcgcc aacaattacc
    21061 tcaggcattt aggcctaatg gtgcaattta cattaatgat actgcttcac taattgcaaa
    21121 taattgtttt tttatcgccc caaccaaact ttatattatg tctcatcaag actctatcga
    21181 tattgatact gagcttgatt tacaacaggc agaaaacatt cttaatcaca aggaaagcta
    21241 aatgcaaaac aacaacgaat ttaaaattgg taatcgttca gtaggttaca accacgaacc
    21301 attgattatc tgtgaaatcg gcatcaatca tgaaggctct ttaaaaacag cttttgaaat
    21361 ggttgatgct gcctataatg caggcgctga agttgttaaa catcaaacac acatcgttga
    21421 agacgaaatg tctgatgagg ccaaacaagt cattccaggc aatgcagatg tctctattta
    21481 tgaaattatg gaacgttgcg ccctgaatga agaagatgag attaaattaa aagaatacgt
    21541 agagagtaag ggtatgattt ttatcagtac tcctttctct cgtgcagctg ctttacgatt
    21601 acaacgtatg gatattccag catataaaat cggctctggc gaatgtaata actacccatt
    21661 aattaaactg gtggcctctt ttggtaagcc tattattctc tctaccggca tgaattctat
    21721 tgaaagcatc aaaaagtcgg tagaaattat tcgagaagca ggggtacctt atgctttgct
    21781 tcactgtacc aacatctacc caacccctta cgaagatgtt cgattgggtg gtatgaacga
    21841 tttatctgaa gcctttctag acgcaatcat tggcctgtct gaccatacct tagataacta
    21901 tgcttgctta ggagcagtag ctttaggcgg ttcgatttta gagcgtcact ttactgaccg
    21961 catggatcgc ccaggtccgg atattgtatg ctctatgaat ccggatactt ttaaagagct
    22021 caagcaaggc gctcatgctt taaaattggc acgcggcggc aaaaaagaca cgattatcgc
    22081 gggagaaaag ccaactaaag atttcgcctt tgcatctgtc gtagcagata aagacattaa
    22141 aaaaggagaa ttgttgtccg gagataacct atgggttaaa cgcccaggca atggagactt
    22201 cagcgttaac gaatatgaat cattatttgg taaaattgct gcttgtgata ttcgcaaagg
    22261 tgctcaaatc aaaaaaactg atattgaata atgcttatta acttagttac tttattaaca
    22321 gaggattggc tattacatat agctaattct cattaatttt taagagatac aataatgcta
    22381 aagaaaataa aaaaagctct ttttcagcct aaaaagtttt ttcaagattc aatgtggttg
    22441 acaacatctc cattttatct taccccccca cgtaacaatt tatttgtcat atctaattta
    22501 ggtcagctta accaagtcca aagcctaatt aaaatacaaa aattaaccaa taatttacta
    22561 gtaattttat atacttctaa aaacttaaaa atgcctaagt tagttcatca atcagctaac
    22621 aagaatctat ttgaatctat ttatctattt gagcttccta gaagccctaa taatataact
    22681 cctaaaaaat tactttatat ttatagaagt tacaaaaaaa tccttaatat tatacagcct
    22741 gctcatctct atatgctgtc ttttacaggc cactactcct atctgattag tattgcaaaa
    22801 aaaaagaata ttacgactca tttaattgat gaagggactg gaacatatgc tcctttatta
    22861 gaatcatttt catatcatcc aacaaaatta gaacgttatt tgattggaaa taatcttaat
    22921 attaaaggat atatagatta ttttgacata ttgcatgtcc cctttcctga atatgctaaa
    22981 aaaatattta atgcaaaaaa atataaccgg ttttttgcgc atgctggagg aataagcatt
    23041 aataataaca ttgcaaactt acagaaaaaa tatcaaatat ctaaaaatga ctatattttt
    23101 gttagtcaac gctaccccat ttcagatgat ttgtattata agagtatagt agaaatctta
    23161 aacagcataa gtttacaaat taaaggaaag atatttatta aactacaccc aaaagagatg
    23221 ggcaacaact atgtaatgtc tttatttcta aatatggtag aaataaaccc tcggctggta
    23281 gttattaatg aacctccttt tctaattgag cccctaatat acttaacaaa tcctaaagga
    23341 attataggcc tggcctctag ttctttaatt tatacaccat tactctcacc ctcaacccaa
    23401 tgtctttcta ttggagagtt aattattaac ttaattcaaa aatattcaat ggtggaaaac
    23461 actgaaatga tccaagaaca cttagagatt attaagaaat ttaattttat taatatacta
    23521 aatgatttaa atggggtaat aagtaaccct ctctttaaaa cagaagaaac atttgaaaca
    23581 cttcttaaat ctgcagaatt cgcatataaa tctaaaaact actttcaggc tattttttac
    23641 tggcaacttg ccagcaaaaa caatattacc ttattagggc ataaagcatt atggtactac
    23701 aatgcacttt ataatgtaaa acaaatttat aagatggaat attcagatat tttttatatc
    23761 gataatatct ccgtagactt tcatagtaaa gataaattga catgggaaaa aattaaacat
    23821 tattactatt ccgccgacaa tagaattggt agagatagat aaaaatacta tgacttctga
    23881 tctccatacg tatgcttgtt ttcaaaaagc agcattaaga tagataagtg aagcttgatg
    23941 agagccattt ttgtggtcat cgccaaggta cacgcggaga gtaatcgaca acagagctgc
    24001 tgtattctgg cttttaaagc ccagtagtaa agtttataag gctgagacct ttgcaaaatc
    24061 ccccaaaatc ccctaaattc ccaccaagac atttaggaga tttctcatga gcaccttctt
    24121 ccagcaaacc gcccaagcca tgattgccaa acacatcgac cgtttcccgc tattgaagtt
    24181 ggatcaggta attgattggc agccgatcga acagtacctg aatcgtcaaa aaacccgtta
    24241 cct
//
LOCUS       DBBZXW010000017        24110 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.017, whole genome shotgun sequence.
ACCESSION   DBBZXW010000017 DBBZXW010000000
VERSION     DBBZXW010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24110
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.017"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..101
                     /locus_tag="ACJJD2_000642"
     CDS             <1..101
                     /locus_tag="ACJJD2_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HGG7579230.1"
                     /translation="TFACALGALVASEHGATPDISAERIGRFMNPV"
     gene            complement(161..718)
                     /locus_tag="ACJJD2_000643"
     CDS             complement(161..718)
                     /locus_tag="ACJJD2_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HGG7579231.1"
                     /translation="MDALKLLTNRRSSKKLKPPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(794..2428)
                     /locus_tag="ACJJD2_000644"
     CDS             complement(794..2428)
                     /locus_tag="ACJJD2_000644"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HGG7579232.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2706..3812)
                     /gene="serC"
                     /locus_tag="ACJJD2_000645"
     CDS             complement(2706..3812)
                     /gene="serC"
                     /locus_tag="ACJJD2_000645"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HGG7579233.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNREGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4177..4608
                     /gene="rimP"
                     /locus_tag="ACJJD2_000646"
     CDS             4177..4608
                     /gene="rimP"
                     /locus_tag="ACJJD2_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HGG7579234.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTISFDGKTVQIELGNIDKARLRPEFKF"
     gene            4636..6138
                     /gene="nusA"
                     /locus_tag="ACJJD2_000647"
     CDS             4636..6138
                     /gene="nusA"
                     /locus_tag="ACJJD2_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HGG7579235.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTAIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVDENQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6150..9038
                     /gene="infB"
                     /locus_tag="ACJJD2_000648"
     CDS             6150..9038
                     /gene="infB"
                     /locus_tag="ACJJD2_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HGG7579236.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQITGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGE
                     LSSLKRYKDDVKEVRMGFECGLMIKGFNEIMEGDQLECFDIVEVARTL"
     gene            complement(9249..10643)
                     /locus_tag="ACJJD2_000649"
     CDS             complement(9249..10643)
                     /locus_tag="ACJJD2_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HGG7579237.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDATRLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(10705..12054)
                     /locus_tag="ACJJD2_000650"
     CDS             complement(10705..12054)
                     /locus_tag="ACJJD2_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HGG7579238.1"
                     /translation="MLNPSRKLVELVRILEEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLIL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWVVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIILNDAPKWAVMLETEWQDGA
                     WFEGRLAQEWLDKGVAANREQVAALEAELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKTNDRT"
     gene            12197..12823
                     /locus_tag="ACJJD2_000651"
     CDS             12197..12823
                     /locus_tag="ACJJD2_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HGG7579239.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLVLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIVIYVVMGWMVLAVMKSLTASLPSAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(12887..14305)
                     /locus_tag="ACJJD2_000652"
     CDS             complement(12887..14305)
                     /locus_tag="ACJJD2_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7579240.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYPYEFHEFHDKG"
     gene            14632..15360
                     /locus_tag="ACJJD2_000653"
     CDS             14632..15360
                     /locus_tag="ACJJD2_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HGG7579241.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15419..15907)
                     /locus_tag="ACJJD2_000654"
     CDS             complement(15419..15907)
                     /locus_tag="ACJJD2_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HGG7579242.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16665..17129)
                     /locus_tag="ACJJD2_000655"
     CDS             complement(16665..17129)
                     /locus_tag="ACJJD2_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HGG7579243.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
     gene            17454..18512
                     /gene="alr"
                     /locus_tag="ACJJD2_000656"
     CDS             17454..18512
                     /gene="alr"
                     /locus_tag="ACJJD2_000656"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HGG7579244.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGITEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(19054..20409)
                     /locus_tag="ACJJD2_000657"
     CDS             complement(19054..20409)
                     /locus_tag="ACJJD2_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HGG7579245.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVTTAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINM
                     DAVKLAGETVKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(20424..20696)
                     /locus_tag="ACJJD2_000658"
     CDS             complement(20424..20696)
                     /locus_tag="ACJJD2_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HGG7579246.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENQINILNISQQLMDDFFT
                     MIILVDTSKCSKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(20822..21559)
                     /locus_tag="ACJJD2_000659"
     CDS             complement(20822..21559)
                     /locus_tag="ACJJD2_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HGG7579247.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVVAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHQRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(21840..22739)
                     /gene="prmB"
                     /locus_tag="ACJJD2_000660"
     CDS             complement(21840..22739)
                     /gene="prmB"
                     /locus_tag="ACJJD2_000660"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HGG7579248.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            22884..23477
                     /locus_tag="ACJJD2_000661"
     CDS             22884..23477
                     /locus_tag="ACJJD2_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579249.1"
                     /translation="MADGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     KNSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            23589..>24110
                     /locus_tag="ACJJD2_000662"
     CDS             23589..>24110
                     /locus_tag="ACJJD2_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HGG7579250.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIAAAAMKA
                     AIPDYMKFGAGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVSKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVERPANPDAVSTCFKADKGAEAVNNDTEHNAT
                     YFSHFPSKQKSTDG"
BASE COUNT         6395 a         6506 c         5924 g         5285 t
ORIGIN      
        1 agacctttgc ctgcgcactt ggtgcgctgg tcgcctccga acatggcgcg acacccgaca
       61 tttccgccga acgcatcggg cgtttcatga atccggttta aaacgcatgg aaaaatgccg
      121 tctgaaagcc tttcagacgg cattgtgctt gagattccgt ttaccaatga ctgacaaacg
      181 cttccaaatc ggtattcttg ggcttatgca cttcctctgt cggcgtgccg accatcatca
      241 gcccgatgat tttatcctta tccgcacatc cgaaagcctc acgcaacagg gggctgttga
      301 cccacatccc cgtaatccag acattgtcga aaccttgcgc cgttgccgcc agttgcagcg
      361 catacgccgc acaacccgcc gtcagcatct gttcccattc cggtttcggc ttaggcacat
      421 cgcggttcgg cgcaaacgtt accccgataa ccatcggcgc catattgccc actttttccg
      481 cctttttcat cgcatcgtcg ccgaaattca attcggcaac cgtttgcttc aacacatcgc
      541 gaaaacgttg caatcctacc tcgccttgaa tcacggtaaa acggaagggg cgcatattgc
      601 cgtgatcggg aacttgggtt gccgcctgaa atatttgttc caactccgcc gcatcggggg
      661 cggggggctt cagctttttg gaagatcggc ggttcgtcaa taattttaaa gcatccatat
      721 cgttatactc cggtcatcgg tcgggtgttc ggacacatat gccgtccgaa ggcttcagac
      781 ggcatatccg gcatcagcgc ggacggcggc aggctgccaa tatatccatt tccttccgat
      841 aggtttggct attggaaatg tccatcagcc ccaataccgt gctgaaatag tggtcgtgcg
      901 aatattcgtt ttccgccgct ttttgtttga ggcattggaa atctatgccc ccgtgttggc
      961 ggaaggcttt ggaaaaccac ataaccatcg ggatatgcgt ctgcccggaa ggcgcgatgg
     1021 cgtaaggcgc ggcgtgcagg tacatcccgt tttcgcccaa actttcgccg tggtcggaaa
     1081 cataatgcac cacgctttcc aaatcgtcgc ggttttcaag tttgcggata accttgtcga
     1141 taaactggtc cacatacaaa accgtattgt cgtaagtgtt gaccagcgtg gcgcgggtgc
     1201 atttgttgat ttcgttggtg tcgcaggtcg gcgtgaattt gcgttcggct tcggtatagc
     1261 gttcgtaata cgtcggcccg tggctgccga tggtatgcag gattaaaacc gcgtctttat
     1321 cgtttttgtt gaggacttcg tcgaacttgg tcagcaggat attgtcgagg cactcgccgt
     1381 tgcggcagta ttcgggcagg ttgagcgagg taacgtcggt attcggcact ttgccgcaca
     1441 cgcccttgca gccggaatcg ttttccaacc aagtaacttc cacaccggcg cgctgcacga
     1501 tgtccagcag gttgtcttgg tgttcggctt tgatttcgtc ataatccgtg cggtcgaagg
     1561 ttgagaacat acacggcagg gagtgcgcgg tcgatgtgcc gcagcttctg acctgcggga
     1621 aattgacaat ttcatcgccg cgcgcggcaa gcagcggcgt agtttggcgg ctgtaaccgt
     1681 tcaaacccca gttggcggca cgcgtggtct cgcccacgac cagcaccacg aaacggcgca
     1741 ggctgccggc cggccggttt tgcacgaccg ccatatccaa ttgcgtataa ggaatattgg
     1801 aacgcttcca atctttgtat ttcgacacgc ccgcgccgat gaaattagat ggcacaatca
     1861 gatgggttac tgatttattg ttgcggaaaa acgaggcgta atcctgatat tgcaacattg
     1921 cgatgcccaa cgcgcacaaa aaggaaacgg cggcaagcac aaggcgcgtc aaaagctcct
     1981 tataccaaac gcggtattta accttgacgg cgatatacgc cagcgcgggc aatacgccca
     2041 aacatacaat ccacagcaca tagcccggcg taatcaggcg cgcgctttcg gcagccgtag
     2101 tttgcaagac attattcaac atcgacttgt tgaaatagat attgaaaaat atttcttggt
     2161 aagacaccgc cgcactgata accaatatca acggaatcaa taccttatgc acgaaaggca
     2221 gggcaatgac gtgaaaaacg aaattactta aaaaaaacag caccaccggc atcgtataga
     2281 ggaagatatc cgccccggtg ccgttaaaag gatgaagctc gacaactttg gcaaaaaagg
     2341 cgtaattcaa taccagcgag gaatacaggg aaaggaaggc aatcagcgcg gaagagccga
     2401 gcttcggcct caggttcggt tttatcattt ggaatgtgtc ggataagggt tggaaaaggc
     2461 atccggcatt tggaatccgg attattgaaa aagattctta attataaggc aacggagcaa
     2521 agcagggcaa gaaaacggaa ggcgacgcag gctgccggat acacatctcg gcacaaacag
     2581 catcacgccc ggattgaaaa ggacggatag ccgccggcag cacaatctta ccacctccaa
     2641 aacgccgccg gagaacgccg aaacagccga tgccgtctga agccgcttca gacaacatcg
     2701 ggacatcaac cgtaacgccg ttggaaatcg cgcataaaat ctgccaaagc ccgcacgcct
     2761 tcgagcggca tcgcattgta gatgctggcg cgcatcccac cgacagactt atagcccttc
     2821 aacaggcaca agccctgcaa ttcggcttcc agcacaaaac ggcggtcaag ctcctcatcc
     2881 cccgtttgga acacgacatt cattttagaa cgcgcattcg gacggatacg gttgatatag
     2941 aaaccgccgc tgccgtctat cgtctcatac aaggtttgcg ccttcagccg attgaccgct
     3001 tcaatttttt tcacaccgcc ctgcgcctgc agccagcgga acaccagccc cgacatataa
     3061 atcgcgtaag ttgacggcgt gttgtacata ccttcgcggt tcaaatgcga acggtagttg
     3121 aacacatcgg gaatatcgtt cggacaacgc tcgagcaaat cctcacgcac aatcaccacc
     3181 gtaacccctg ccggcccgat gtttttctgt gcgcctgcgt aaatcagtcc gtagtcggca
     3241 acatcaaact cgcgcgacaa aatctcgctg gacatatcgc acaccagcgg cggcatgcct
     3301 tctgaaaggc gcggcacttc acggtattgc agcccgttga ccgtttcatt gacggcaaaa
     3361 tggacaaacg ccgaatcggg tgcaacatcc cacgtttcca caggcggcag gtcgagatag
     3421 tcgaactgct cgccgccatg cgccgccaaa cggatttccg tatcggtcaa acggctcatc
     3481 tgttcataag cgatacggct ccagttgccc gttaccaccg cgtcggcagt gcggaaaccg
     3541 tgtgccagat tcatggctgc catattaaat tgggttgttg ctccgccctg cagaaacaat
     3601 atcttatagt tgtcaggcac tttcaaaagc tgcctcaaat cctgttccgc atgatgcagg
     3661 atgctcaaaa acatttccga acggtggctc atcgccatca caggaaaacc cgtaccgttg
     3721 tagtccaaca tttcctgccg cgccgtttcc aacacggctt cgggcaatac ggcagggccg
     3781 gcggaaaaat tgtaaatcgg ataaagagac atgatgcagc cttgattctg aacaataacc
     3841 cgcccgattt taggcttgca gcaggctttg tgcaaggatg gaaaatacct gtcctccgcc
     3901 cggcttcatg ccgcccgaac acggaaaaca acatcaatat attgatttac aaacataaaa
     3961 atcatgctag cgacaaatag atacatttgt tttgtcaaca atattcacga tttcccatta
     4021 caaacctccc ttacacccgc ttttttccgt cccaaaaaca caaaataaat caacactttc
     4081 atttctccgc aaaagcggtt ataattacgc cgatttttca actttgacga aaaatggcca
     4141 cggggccatt tttttattat gtacataggg agcagcatgg atatccaaac catcctcgaa
     4201 aaaaccctgc ccggcctggg ctacgaactg gtcgatttcg aactgaccgc gcaaggaaca
     4261 ttgcgcgtgt tcatcgacaa agaaagcggc attaccgtcg aagactgcgc aaccgtcagc
     4321 aaccatttga gccgcgtctt catggttgaa gacatcgact acaaaaacct ggaaatttcc
     4381 agccccggac tcgaccgtcc cttgaaaaaa gccgccgact tcgtgcgctt tgccggtcag
     4441 aatgccaaaa tcaaaacccg cctgccgata gacggtcaga aaaactttat cggtaaaatc
     4501 gaaggctgcg aaaacgatac cgttaccata tccttcgacg gcaaaaccgt acaaatcgaa
     4561 ttgggcaaca tcgacaaagc ccgcctgcgc cccgaattca aattctaaaa cacaacaata
     4621 ttggagatgt tcaaaatgag tcgtgaaatg ttacagctgg cagaagcact ggcaagcgaa
     4681 aaaaacgttg atgcggaagt cgtcttccaa gcactggaat tcgccctgtc taccgccgcc
     4741 aagaaaaagg cagaccgcga acacatggat gtccgcgtcc aaatcaaccg cgataccggc
     4801 gaataccaaa ccttccgccg ctggctgatt gtcgccgatg aagactatac ctatcccgat
     4861 gtcgaaaaaa ccatcgagga aatccaagag gaaattcccg gcaccgccat ccaaatcggc
     4921 gaatactacg aagagcagct gcccaacgaa ggcttcggcc gccaagccgc gcaaaccgcc
     4981 aaacaaatca tcctgcaacg catccgcgat gccgagcgcg agcagaatct gaacgagttt
     5041 ctcgccgtca aagaagacat cgtgtccggc acggtcaaac gcgtcgaacg ccacggcatc
     5101 atcgtcgaag tcgttgccgg caaactggac gcgctgattc cgcgcgacca aatgattccg
     5161 cgcgaaaact tccgcagcgg cgaccgcatc cgcgccctct tcctgcgcgt cgaagaaatc
     5221 ggcaacaccg gccgcaaaca agtcatcctg agccgtactt ccggcgattt cctcgtcaaa
     5281 ctgtacgcca atgaagtacc tgaaattgca gacggcatgc ttgaaatccg cgctgtcgcc
     5341 cgcgacccgg gccagcgtgc caaagtcgcc gtcaaagcca acgaccagcg catcgatccg
     5401 caaggcacct gtatcggcgt tcgcggttcg cgtgtcaatg ccgtcagcaa cgaattgtcc
     5461 ggcgagcgca tcgacgttgt cctttggtcg cccgagcctg cccaattcgt catgagcgcg
     5521 ctctcacccg ccgaagtcag ccgcatcgtg attgacgaag acaaacacgc cgttgacgtg
     5581 attgttgatg aaaaccaact ggcgctagcc atcggacgcg gcggtcaaaa cgtgcgcctt
     5641 gcttccgacc tgaccggctg gcagctcaac atcatgactt ccgccgaggc agacgaacgc
     5701 aatgcggcag aagatgccgc catccgccgc ctgtttatgg atcacttgaa cgtggacgaa
     5761 gaaaccgccg acgtactggt tcaagaaggt tttgcaacct tggaagaagt cgcctatgtt
     5821 cctgccgccg aactgcttgc cattgaagga tttgacgaag aaatcgtcga tatgctccgc
     5881 aaccgcgccc gcgatgccat cctgaccatg gcgattgccg ccgaagaaaa actgggcgaa
     5941 gtgtccgacg atatgcgcaa cctcgaaggc atagatgccg atatgctccg cagccttgcc
     6001 gaagcaggca ttaccacccg cgacgacttg gcagagcttg ctgtggacga actgattgaa
     6061 atcaccggtg taaacgaaga aaccgcaaaa gccgtcatcc tgaccgcacg cgaacactgg
     6121 tttaccgaag acaaataaag ggggtacaga tgagtaacac aaccgtagaa caatttgccg
     6181 ccgagctgaa acgccccgtc gaagacctgt tgaaacagtt gaaagaagcc ggcgtcagca
     6241 aaaacagcgg cagcgattcc ctgacgctgg acgacaaaca gcttctgaac gcctacctga
     6301 ccaagaaaaa cggcagcaac ggcggcacca tcagcatccg ccgcaccaaa accgaagtca
     6361 gcaccgttga cggcgtaaaa gtcgaaacac gcaaacgcgg acgcactgtc aacattcctt
     6421 ctgccgaaga attggcagca caggtaaaag ccgcccaaac ccaagccgca cctgtccggc
     6481 cggagcagac ggcagaagac gcggcaaaag cccgagccga agctgccgca cgtgcagaag
     6541 cccgtgccaa ggcagaagcg gaagcggcaa aactgaaagc ggcaaaagca ggcaacaaag
     6601 ccaaacctgc cgcgcagaaa cccaccgaag caaaagccga aaccgcacct gttgcggcgg
     6661 aaaccaaacc cgccgaagaa agcaaagcgg aaaaagccca agccgacaaa atgccgtcta
     6721 aaaaacccgc cgagcccaaa gaaaaagccg ccaagccgaa acacgagcga aacggcaaag
     6781 gcaaagatgc caaaaaaccg gcgaaacctg ccgcacctgc cgtgccgcaa cccgtggtca
     6841 gcgcagaaga acaggcgcaa cgcgatgaag aagcacgccg tgccgccgca cttcgcgccc
     6901 accaggaagc cctgttgaaa gagaaacagg aacgtcaggc acgccgcgaa gccatgaaac
     6961 aacaggcaga acaacaggca aaaaccgcac aggaagccaa aaccggcaga cagcgtcccg
     7021 ccaaacctgc cgagaaaccg caggcagccg cgccggccgt cgaaaacaag cctgtcaatc
     7081 cggcaaaagc gaaaaaagaa gaccgccgca accgcgatga cgaaggtcaa ggccgcaacg
     7141 ccaaaggcaa aggcggaaaa ggcgggcgcg accgcaacaa tgcacgcaac ggcgacgacg
     7201 agcgcgtacg cggcagcaaa aaaggcaaaa aactcaaact cgagccgaat caacacgcct
     7261 tccaagcacc gaccgaaccc gtcgttcatg aagttttggt tcccgaaacc attaccgttg
     7321 ccgatttggc gcacaaaatg gcggtcaaag gcgtggaagt ggtcaaagcc ctgatgaaga
     7381 tgggcatgat ggttaccatc aaccaatcca tcgaccaaga caccgccctg attgtggtgg
     7441 aagaactcgg ccacatcggc aaacctgccg cagccgacga ccctgaagca ttcttggacg
     7501 agggcgcgga agcagtggaa gccgaagcat tgccgcgtcc gcccgtcgtt accgtgatgg
     7561 gccacgtcga ccacggcaaa acctcgctgc tggactacat ccgccgtacc aaagtggtac
     7621 agggcgaagc gggcggcatt acgcagcaca tcggcgcgta ccacgttgaa acccctcgcg
     7681 gcgtgattac cttcttggac accccgggcc acgaagcctt taccgctatg cgcgcacgcg
     7741 gtgcgaaagc aaccgacatc gtgattcttg tggtcgccgc cgacgacggc gtgatgccgc
     7801 aaaccatcga agcgattgcc cacgccaaag cggcaggcgt accgatggtg gttgccgtca
     7861 acaaaatcga taaagaagcc gccaacccag agcgtatccg ccaagagctg accgcacacg
     7921 aagtcgtgcc tgacgaatgg ggcggcgatg tacagtttat cgacgtttcc gctaaaaaag
     7981 gcctgaacat cgatgcattg ctcgaggcag tcttgctcga agccgaagtt ttggaactga
     8041 ccgcacctgt cgatgcgccc gccaaaggca tcatcgtcga ggcgcgcttg gacaaaggcc
     8101 gcggcgcggt tgccacattg ctggttcaaa gcggcacgct gaaaaaaggc gatatgctgc
     8161 tggccggtac ggcattcggc aaaatccgcg cgatggtcga tgaaaacggc aaatccatta
     8221 ccgaagccgg tccgtccatc cccgtcgaaa tcctcggctt gtccgacgta ccgaatgcgg
     8281 gtgaagacgc gatggtattg gcggacgaga aaaaagcgcg cgaaatcgcc ctcttccgcc
     8341 aaggcaaata ccgcgacgtg cgccttgcca aacagcaggc ggcgaagctg gaaaatatgt
     8401 tcaacaatat gggcgaaacc caggcccaat ctttgtcggt catcatcaag gcagacgtgc
     8461 agggctctta cgaggctttg gcgggcagcc tgaaaaaact gtccacagac gaagtgaaag
     8521 tgaacgtgtt gcacagcggc gtgggcggca ttaccgaatc ggatgtcaac ttggccatcg
     8581 cttcgggcgc attcattatc ggctttaacg tgcgtgcaga tgcctcttcg cgcaaacttg
     8641 ccgaaaatga aaacgtggaa atccgctact acaacatcat ctacgatgcc atcgacgacg
     8701 tgaaggcggc gatgagcggc atgctttctc cggaagagaa agaacagatt accggtacgg
     8761 tcgaaatccg tcaggtcatc tccgtttcca aggtcggcaa cattgcaggc tgtatggtta
     8821 ccgacggtgt ggtcaaacgc gattcccatg cccgcctcat ccgcaacaac gtggttatcc
     8881 ataccggcga gctgtcttct ttgaaacgct acaaagacga tgttaaagaa gtccgtatgg
     8941 gcttcgagtg cggcctgatg attaaaggct tcaatgaaat tatggaaggc gaccaactgg
     9001 aatgcttcga catcgtcgaa gttgcacgca ccctgtgatt ttgatgcgga aaaatgccgt
     9061 ctgaagcgtt cagacggcat acgaaacggg ttctgtatca tacagaaccc gttttttgtc
     9121 gcaaatcggc ttcagacagc cctcttgcct tatcccgatt tgaatctgac ttgccataca
     9181 aacaggcttc agacggcatt atagtgaatt aaatttaaac cggtacagcg ttggctcgcc
     9241 ttgccgtact atttgtactg tctgcggctc gccgccttgt cctgatttaa atttaattca
     9301 ctatattttc ccgacaggcg gatttgaagt ttctccacat atccggcgcg ttcggcgcgg
     9361 ctggtttcgg ggcggtgcgt attgagcgac gaccatttcc aatgactgcg ggctttgttg
     9421 agttcgggcg ggagtctggt ggcgtcccac ggggctttgc ggctgtgcag ctcgatatcc
     9481 gactgtgccg cgtgtccgcg cgtttgcagg acgtggagca aatcgagggc gcgggcggcg
     9541 agcagggtca gggtttcagg gtcggtgtgc aaggtttggc ggccggagag tttgtcggaa
     9601 atggtgcggg tattgggcag gatgccgccc aaaaagccgc cgattgccgt acccaatccg
     9661 agcgagccgc cgagtgtggc gatgtccagc cccaagccga tgagtgcgcc ggttgccgcg
     9721 cccgtgccgg tgcggatgcc gtattgtttg agcaattcgc tgtcgaacgg gtcttggcgg
     9781 aaggcttgcg gcatccagtc gccgccgtcg atttcgctgt ggtagaaacg gtagagggca
     9841 aacagccgct gctgcatctg ccgttcgagt tggcgtattt ccgcctgcat ggtttgcagc
     9901 acggtggcgg tatcctcgtt ttcgtccact tcctgcctga aggcggcggc atcgagcagg
     9961 aaatcggcga tttcgcggcg cgcttcgccg tccagccgct gccattcgcg ccggcgcatg
    10021 gctgtcaggc ggtcaagtgt gctgcgttcg ggcaacatgg tggcgaggtt ttcccacagg
    10081 cgtagttcgc cttcaaaatc aaaggcgacg gtgtcgaacc ctgcgaaaac gtgcaggttt
    10141 ctcctcgcca gcatggttgt ccacgattcg ggaggctgtc cgccggtaaa gttgaacacg
    10201 ggcataaccg gtttggcgca ccatgaaagg ataatcaatt catcccgata tttgtcgaga
    10261 acgggttcgc gcgcgtcgat gacgtacatt gccatatcgc tttgcaagac ttgccgtaag
    10321 actttggctt cctgattgaa atcatggtgc gcgccgtggc tgccgagaaa ctgttgcagc
    10381 cgttcgatgc cgtctgaacg attgtccgta tggttttcca gccattccag cacgccgccc
    10441 gcgtcttcga gtccgggcgt gtcgtacagg aaaaccagcg tgtctgcgcc gtcgctgatg
    10501 gcggcttctt cgacatgacg cgtggtcgat ggggcgtttc tgacttcgcc gaaaccgctg
    10561 tcgcgcaaaa gggtacgcag gagcgaggtt ttgccggtgt tggtatgccc gacgacggcg
    10621 agggaaaggg gttgtttgtt catgatgttt ttgaagaatg gattttcaga cgacctttta
    10681 aggatggcgg ctttatgggg cgtttcaagt gcggtcgttg gttttcagac ggccttcctg
    10741 cgccgctctg tcgggttcca gccacgccgc gccgcattcg gccagcgcgt tacgccaatg
    10801 ttccagcttt tccgaaaggt cgtctgaaag cccctgttcc gccaaaagct gcaccaccgc
    10861 gccgccctgc gccgcttccg agagtcggac aatctgccgc aacacacccc ggtccggcac
    10921 agtttgggcg cgcacgccga taagcagttg cgccggtttc tgcttcaact ccgcttccag
    10981 cgcggcgacc tgttcccgat tggcggcaac acctttatcc agccattcct gcgccagcct
    11041 gccctcgaac cacgcgccgt cctgccactc ggtctccaac atgaccgccc atttcggtgc
    11101 atcgttcaag atgattttcg gtgaaacggc ggacacggtt tcccgacgcg tatccgcatc
    11161 ggtgattttg ttctgccagc ggcggatgac cgcctgataa tagggctttt ccaaatccaa
    11221 gccgttctcg cttgttttca aaaggatttt acacactacc caagccagca ggcgcggcag
    11281 gatgccgtag caggcgatac tgccgaccag cagccccgac caagcccgcg catcggcaat
    11341 attgccgttc agacgacctt cgatgaccgc tcgcgcatca ggcacgggaa aacccagttt
    11401 cgcaggcagc catgccaaca tttccaccag ccgtaccgaa gacgaatcgc ccaacagcgt
    11461 gctttcccag ttgaacgtat attgccgcac caaaagcagc aacaataccg acaccagcat
    11521 tccgagcagc gtgcagagcc acaggctgtg cgacgttgcg cctattttcc aacgtaccga
    11581 aggttgccgc cactcgtccg catacagccg caacaccgcc tgatttacag ggtctttgcc
    11641 ccgaaaccac gtcgccggac tgctgaaaaa acgccccact ttcacgcgca ggaacaacat
    11701 tgccaaccat actgccaaca taagcgtatt catgcccaac acgcccgcca aaatcaggaa
    11761 gaaattcagc ccctgattgt ccattagaag ataagtgcct gaaaatccgg cggtaaacat
    11821 catcgatgcc gccaccaccc acaaccagaa cgaccccgca cgcacacgtt ccaacgtctc
    11881 ccgcagcata cggttcctgt caatcatctc cgcccgacgg atgatttttt cctccgtact
    11941 gccgtccacg cggcgcaaag cctccgtcgc ctgcacggga tcgccgctga aaataaagcc
    12001 gccttcttcc aaaatacgga ccagctcaac cagttttcgg gatggattca acataaaatg
    12061 ccgtctgaaa ataaaaaaca gattttaaca cacgaatttt caagaatatt cacagtgtag
    12121 gcaaagagta aatcccacac agaggcaaaa gtatcggcgt aaactgactg cctctacttt
    12181 cccgaaagat tgtgcgatgt atacaggcga acgcttcaat acttacagcc atttgagcgg
    12241 tttgattctg gcggcggcag gtttggtgct gatgctgctg aaaaccatag gacacgggga
    12301 cggctaccgt atcttcagcg tatcggttta cggcatcagc cttcttctgc tctatttgag
    12361 ttcctcgctg taccacggaa ttgcagccgg aaaactgaaa agcattttga aaaaaaccga
    12421 ccactgcatg atttatgtcc tgattgccgg aagctacaca ccgtttgcac tggtttcttt
    12481 gagaaacggg ccgggctgga cggtattttc actgtcctgg ctgctggcgg ctgcaggaat
    12541 cgcacaagaa ctcaccatcg gacggaaaag cgaaaaacgt ctgctgtcta ttgtgattta
    12601 tgtcgtcatg ggttggatgg tcttggcggt aatgaaatcc ctgacagcct cactcccgtc
    12661 ggcaggactg gcttggctgg cggcaggcgg tatgctgtac agcgtcggca tttactggtt
    12721 tgtaaacgat gaaaaaatcc gacacgggca cggaatctgg catctgttcg tattgggcgg
    12781 cagcatcacc caatttgtca gtgtgtacgg ttatgtaatc tgaatgccgt ctgaaaaaca
    12841 aaacctcccg atcctgaaga ttgggaggtt ttctgtttgc cggacatcag cccttgtcgt
    12901 ggaactcgtg gaattcatac ggataagaca aatcccgacc cgcttttttc tgtgccaaat
    12961 aatcatcata aatggcacgg atttccttac gcaacaaaaa cagggctatc aagttcggga
    13021 taaccataaa gccgttgaac atatcggaca ggctccaaac caaatcgact ttgccgagcg
    13081 tacctaaaac gatggcaagc agaaccaatg cgcgatagat gcccaagtgt cttcccctga
    13141 aaagaaaacg gatgttggac tcaccgaaat aataccagcc gataatggtc gtcaaggcga
    13201 agaaggtcag acacacggca agcaattgcg aaccgaagcc cggaaatgcc ttgttaaagg
    13261 caaattgagt aaccgccgcg ccctgttcgc ccgaaaggtt ggcatcggtc agcaggataa
    13321 tcagcgcagt tgccgtacat accaaaatcg tatcgataaa cacaccgaca aatgccgcca
    13381 taccttgctg cacaggatgc ttcacatccg cagtcgcgtg ggcgtgcgga gtcgaaccca
    13441 tccccgcctc attggaaaac agaccgcgcg ccacgccgaa acgtatcgct tcgcgcatac
    13501 cgatacccgc cgcaccgccc aaaacggctt cgggattgaa ggcggcggta aagatgtggt
    13561 tgaacatcgg cacaatatgg tcggaaaatt caaacaggat aacgacggcg cacaaaatat
    13621 aaacaaccgc cataaacggc acgacaaatt gggcaatatt ggcaatacgg ttcacgccgc
    13681 caatcacaac catgcccgca aggacggcaa gcacaatacc gactgccaaa gaaggcacat
    13741 caaatgcaat ggtaacggca gaagcaatgg agtttgcctg tgtcgcatta ccgataaagc
    13801 ccaatgcgat aatcaacgca atggaaaaga aaccggacaa aaaacgcgcc gctcccctgc
    13861 cgattttcgg agtcagaccg tgggtgatgt agaacgccgg cccgccgatg tatttgccgt
    13921 ggctgacgac gcggtatttc tgcgccagca gtgcctccgc aaaaatcgtg gacatcccca
    13981 aaacggcaga aacccacatc caaaaaatcg cgcccggccc gcctgcggtg atggcggtcg
    14041 ccacgccggc gacgttgccc gtaccgattt gcgcggatat ggcaaccgcc aacgcctgaa
    14101 actgcgataa agacttgtcg tctttatcgc ctttggcaaa caagccgccg aatacggatt
    14161 tgaatcccgc gcccagcttg gtaatctgcg gcgcaccaag atacagcgta aaaaacaggc
    14221 cgatacccaa aagcgcgtaa atcagcaggt agtcccaaag gaaccgattg actgtaccca
    14281 ccagaacaga caatatattt tccataaaat aaaccttatc ttacaattaa aatgactgcc
    14341 ttccaaaaga cattccaata aggaaacacg gcgagcagac cgtatttgcc gcaacagatg
    14401 ccttaaattg tcaacaatcg gggagaagct gcgccatcat accgtaaaat atcgttaatt
    14461 aaaacatttc tttattttta agcggaaagc ggaggaaatc gctttcagac agcatagaca
    14521 acggcacggc ataaaacagg atattttggg tacttgcaac ttatgttaaa atgccgaccg
    14581 taaaaaatct gacaaaaaca gattaattat ttgaaataag aaaggaaatt tatggcaggc
    14641 catagcaagt gggcgaatat ccagcataaa aaagcccgtc aggatgccaa acgcggcaaa
    14701 atcttcaccc gtttaatcaa agaaatcacc gttgcggcgc gtatgggcgg cggcgacccc
    14761 ggtgccaacc cgcgcctgcg cctggctttg gaaaaagcag ccgaaaacaa tatgcccaaa
    14821 gacaatgtgc aacgcgccat cgataaaggt acgggcaact tggaaggcgt ggaatacatc
    14881 gagttgcgct acgaaggcta cggcatcggc ggcgcggctt tgatggtgga ctgcctgacc
    14941 gacaacaaaa cccgcaccgt tgcggacgta cgccacgcgt ttaccaaaaa cggcggcaac
    15001 ttgggtaccg acggctgcgt ggcgttcaac ttcgtgcatc agggctattt ggtattcgaa
    15061 cccggcgttg acgaagacgc gctgatggaa gcggctttgg aagccggtgc ggaagacgtg
    15121 gttaccaacg acgacggttc catcgaagtc attaccgcgc caaacgattg ggcgggcgta
    15181 aaatccgctt tggaggcggc aggttacaaa tccgttgacg gcgacgttac gatgcgcgcc
    15241 caaaacgaaa ccgaactctc cggcgacgat gccgtcaaaa tgcaaaaact gattgacgcg
    15301 ctggaagact tggacgacgt gcaagacgtt tacacttccg ccgtattgaa tctggactga
    15361 tacgcagcac agcagacata caataaaatg ccgtctgaac ctttcagacg gcattgattt
    15421 atttagccct tgcccacgcc caccaaaccg tcaggacaac cgccagaaaa tacgccgcgc
    15481 tccaaacagg caaagcaacc cctaacagat aatccggttc ggcacaattt ccgaacccgc
    15541 gcacgacagg ctcgaaccaa tcaaacaaag accagccctt caagcggaac gtccacggcg
    15601 caccgcacga aggagccgta cccggcggca gcgactgcaa ccacaactga tatgccgcaa
    15661 cagaaatacc cgtaacggcc ggaatgctga taaagacagc accgaacaaa ccgcccgccc
    15721 ttcttcttgg tctgcacatc aggacaattg ccgtacacaa tgcggttgcc aaaacgcata
    15781 accgctgact gatacacaaa acgcaaggct ccatacccaa aacatactgt gccgccaaag
    15841 aaccggcaaa tgcacagacc gaaacggcaa acagcagcca aacggctttt ctaaataacg
    15901 gggtcatttt ctcaacacac caatcaaaat accgatatgc cgattttgct ggatatatcc
    15961 cgagatggca agggacgaat cgacaccggc gcaggtgcgg acgatttcgg ttttcccgat
    16021 atacacaaga cctgacaagg gacaaaacgg cgatttgccc gcacaatgcc cgcaaaaaaa
    16081 tacatccgga ggatttgaat ttcggcaaat ttagcgaatc aaaagtttat ttcaatgaaa
    16141 ttatatgatt tttttgaata agcggattga caggtttttg aaggaatttg ttaccggata
    16201 gccatcgggc aagttttttg caaaatttga atcggtcggg taaattttca aaaaataatt
    16261 gacagcggat aagaaacggc ggataattct cgccgtcgag ttgcttgatg cagcttgatt
    16321 tttctcctct atttctcctt tgtagacttg gcacacattc aaccggatgt gtgcattttt
    16381 ttatctccgc tttttttgaa atttaattac ttttattgtt tgaaattcca ttctttaaga
    16441 aatttaacaa gaaaaacgct tgctttttga ccggaaaagc tgcataattc gttccgttag
    16501 ctggttcgag tagtcagtta atagtttctc ctctatttct cctttgtaga cttggcacac
    16561 attctattga atgtgtgcat ttttttatct gaagcaacaa gcctctgtgc gtgatgttgt
    16621 tatgtttcat ttaggtgtca aaccgcatat ccggtctgaa atattcaatc caaatccaaa
    16681 accggatttt ctttgacctc ctccatcaca acataactcc tactctccga agcggcaggc
    16741 agttgcaata ggatattgcc tagcatatcc cgataggcag acatatcggg caaacgtact
    16801 ttaatcagat agtcgtattc gcccgacacc aagtggcatt ccataatttg cggaattttc
    16861 agcacttctt ttttgaaatc ttcgaaaata ttgcccgatt tggattgcag cttcagctcg
    16921 acaaaaacca atagtggttt gcccaacaga tggggattga ggtgggcgtg atagccggaa
    16981 atataatgtt cccgctccaa acggcgcacc ctctctgtaa cgggcgtggt ggacaagcct
    17041 accttctcgg caagctccgt catcgggatg cgggcattct gttgaaggat cttaagaatg
    17101 cggaaatcga ttttatctag ttctttcatt tggattgcct tgtatttatt attgatttta
    17161 acaaatagag tatatagtgg attaacaaaa accagtacgg cgttgcctcg ccttgccgta
    17221 ctatttgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc cactatatat
    17281 ttgggaaagc gattatatca ggaaaagcaa accgccttcc tacctgaaaa ctgctgcttc
    17341 ggcttgaaga cacaagggtc tttaatattt taaaagcctt gccgttggat tataattccc
    17401 taattgattt cttaattttg ctaataaaca cttgcttggt aaggaatgaa tttatgcgcc
    17461 ctttgaacgt gcagatcagg ttgggcaacc ttaggcacaa ttatcggatt ttaaaggaaa
    17521 tgcacggagg caagctgttg gcggtagtga aggccgacgc atacggacac ggtgcggtca
    17581 gatgtgcttt cgcgctggca gacttggcag acggctttgc cgtggcgaca atcgatgaag
    17641 gaatcaggct gcgggagagc ggcattaccc atccgattgt ccttttggaa ggcgtatttg
    17701 aagcatcaga gtacgaagcg gtcgaacaat actcgctctg gccggcagtc ggaaaccaat
    17761 ggcaacttga ggctttgctt tcccgccatt ggaaaaaacc tgtcaaggtc tggttgaaaa
    17821 tggattcggg aatgcaccgt accggttttt tccctcatga ttacgcttcg gcatatgcgg
    17881 cattgaagca gtcggaatat gtggacagta ttgtcaaatt ctcgcatttc tcctgtgcgg
    17941 acgaacccga aagcggtata acggaaatac agatggaagc attcgatttg ggtactgaag
    18001 ggctggaagg cgaagaaagc cttgccaact ccgccgctat tttgaatgtt cccgaagcac
    18061 gcagggactg ggggcgcgcg ggcttggcgt tgtacggcat ttccccgttc ggaggcagcg
    18121 atgacaggct gaaacccgtg atgaggcttt ccacccgtat tttcggcgaa cgcgttttac
    18181 agccgcactc ccctatcggt tatggcgcaa cattttatac cagcaaatct acgcgggtcg
    18241 gcctgattgc ctgcggttat gcggacggtt atccgcgccg tgccccaagc aattcccccg
    18301 tcgccgtcga cggtaaattg acccgggtca tcggcagggt ctctatggat atgatgacca
    18361 tcgagctgga cgcttcacaa gaaggtttgg gacacgaggt cgaactgtgg ggcgatacgg
    18421 tcaacatcaa taccgttgcc gaagcggccg gaaccatccc ttacgaattg atgtgcaata
    18481 tcaaacgtgc aaaattcact tatatcgagt aaccgggttc aaacgaaaat gccgtctgaa
    18541 gcctttcaga cggcataaat gcgttttgac aaaatcagta aaagacattg ccaaatagaa
    18601 aatactgata atgcccacaa tctgaaaccc catccttccc gcaaaaacgg aaaatcaaaa
    18661 tcagaaacct aaaatttcgt cattcccgcg caggcgggaa tccggttttt tgagtttccg
    18721 tcatttctga taaattctcg tcgtttttca tttctagatt cccgcctgcg cgggaatgac
    18781 aaaattaaag tttcagaatt tatttgaaca acaaactaga ttcccacttt cgcggggatg
    18841 acggcggata ggttttgttg tttcggataa attcctgttg ttttttggtt tccagattcc
    18901 cacctttaaa agaatgacgt aagaaagcag aaataaggac acagggattt tttaaatttg
    18961 caatattctt ttctaaagac attttacccg atgcctataa acaaaaatgc cgtctgaagc
    19021 ctttcagacg gcatttcccc atcaaaaccg caatcagttt ttcatcgatt gaaccggtgc
    19081 gggaatcctg ccgccccggt tgacgaacac ttcgcatgag ccttctttta ccggcattac
    19141 aggcgcgtag cccaacaggc cgccgaactc gacgctgtcg ccgacggttt taccggttac
    19201 cggaataatg cgcacggcag tggttttgct gttgatcatg ccgatggcgg cttcgtcggc
    19261 aatgatgccg gaaatggtgt gcgcgggtgt gtcgccggga acggcaatca tatccaagcc
    19321 gaccgaacaa acggcggtca tggcttcgag tttgtccagc gtcagcacgc ctgcttcggc
    19381 ggcggcaatc ataccttcgt cttcggaaac ggggataaac gcgccactca aacccccgac
    19441 cgcgctggaa gccatcatgc cgcctttttt cacggcatcg ttcagcaatg ccaaagctgc
    19501 tgttgtgccg tgcgtaccgc agacgctcaa gcccatttct tcaagaatgc gtgccactga
    19561 gtcgccgacg gcgggggtcg gcgccagcga caagtcgaga ataccaaacg ggatattcag
    19621 catttttgag gcttcgcggc cgatgagttc gcccacgcgg gtaattttga aagcagtttt
    19681 cttcactact tccgcaactt cggtcaatgt cgttgcatct gaattttcca acgcggcttt
    19741 tacgacacct gggccggata cgccgacatt gataacggca tccgcttcgc ccgaaccatg
    19801 aaacgcgccc gccataaacg ggttgtcttc caccgcgttg cagaacacga caattttagc
    19861 gcagccgaaa ccttcgggcg tgatttccgc cgtgcgtttg acggtttcgc ccgccagctt
    19921 gaccgcatcc atattgatac cggcacgcgt actgccgata ttgatggagc tgcacacaat
    19981 atcggtagtc ttcatcgctt cgggaatgga gcggattaac acctcatccg aaggcgacat
    20041 ccctttttgc accaacgcgg aaaaaccgcc gataaaagac acaccgatgg ctttggcagc
    20101 tttatccaaa gtttgcgcca cgctgacgta agaatcagca tgggtggccg ccgcgatttg
    20161 ggcaatcggc gtaacggaaa tgcgctgatt cacaatcggt acgccgtatt tggcagacag
    20221 atattttgcc gtagtgacca agtctttgcc gactgtggta attttattgt aaatattttg
    20281 gttcaacaca ttgatatcgc tgctgatgca gtcgtgcaaa tcaatgccga tggtaatggt
    20341 gcggacatca aaattctggt cggcaaccat tttgacggtt tctaaaattt cgccggattg
    20401 gatactcatc acattcctcc aactcaaatg cggtgcatcg cttggaagat ttcttcgttt
    20461 tgcatacgga tatcaagcgc gagttttttg ctctcttccg caaacaaatc caaaacctct
    20521 tgacgcgatt tgctgcattt tgaagtgtcc accaagataa tcatagtaaa aaaatcgtcc
    20581 atcagctgtt ggctgatgtt gagaatattg atttggtttt ccgccaaaat tttggaaaca
    20641 tcgtacacga tgccgacgcg gtctttaccg atgacggtga tgactgaatt gttcacaggc
    20701 ttactccttg cagatatccg ttaaagtccg aaattatacc accgttggat tttgaagaaa
    20761 tattgtcaac aatatataca tacaaaatgc cgtctgaaac tatttcagac agcatcaaga
    20821 ttcagggttc gattaaataa ccatccttat cccactgggt tttcctgacc aacttgtcat
    20881 cctgataaac agcttcgctc tttttagaac catcttcata ccactccaaa accaccccgt
    20941 tgcgttgatg gtggcggata gacagttccg agagtaatcg gccgctttca tcccaagtca
    21001 gaattttggc aggctcatcg ttgaccataa ccatttccgt cttgatactg ccgtcggcat
    21061 accattgctt ccatacgccg tttgccttat tttgcttaaa ctggatttcg ctttccttgc
    21121 cgccgttacg gtaatagcgg tatcccgtac cctcactcaa gccattttta taaggcataa
    21181 cggcagattt tttaccgttc ggataccagt tgacccactc cccgtccggc ttacccttgc
    21241 tgaagccccc cgccattttt ttctgaccat taaaatgcca caaaatcaac ataccgtttt
    21301 gcagggtagg cacaaaagat ttgatttgcg ttgaagcaac gatataaggt tcagaatatt
    21361 tcttcatcga cggataataa aaatcctgcg cgtgcgcaat acccgccacc acactatatt
    21421 gcctgatata agcggcagaa gacatcgtcg ccgtcagctt tccgttctga ttaaaataaa
    21481 cagaataggt ctgcgccggc aaagcggccg aaaaacccaa caggacagtt gaaaatacaa
    21541 tccgagataa ttttttcatt gcaatagcga tataaaaaca aggctgtgtt ttagtaatct
    21601 gttgatttca attatttgca agggaaaaga caattatttt ccggttagga ataaacctat
    21661 tctattgaat atattgaagc caagtacgcc tatcaacact atattaaaac actgccaaaa
    21721 acaattaact tataaacaat atggtaagga tttctctgcc aagcatcaaa cccgagacaa
    21781 cgtatcgtaa aaatgccgtc tgaaaacaaa tcgtcttcag acggcatttc cccttcaact
    21841 cactcttcac ccaataactg ctcgcgcgtc aagaggaaaa caaaaccgtc gcccccgctg
    21901 gtttccaacc aagtaaaagg caactccgga tacgctgctt ccaatacatc cctgttatgc
    21961 ccgatttcca ccagcaatac acctttggga ttcagaaact ttgccgcatt cagaagaatc
    22021 tgcctggtgg catccaaccc gtccgccccg ctgcccaatg ccaattccgg ttcgtgcaaa
    22081 tactcttcag gcaataactc aaccgattcc gcatccacat aaggaggatt ggaaacaatc
    22141 aaatcataag tgccttccaa tccttcaaac aaatccgtat gaataagccg gatgcgttct
    22201 tccaaaccat aatcttcgac attaatccct gccacttcca aagcatccaa gctcacatca
    22261 accgcatcaa tttgggcatc aggataatga tgcgccatct gaatggcaag gcaaccgctt
    22321 ccggtgcaaa gatccaaagc attatgcacc aactcatcgt attctatcca aggacgaagt
    22381 ccgtcaccca acaattcata aataaaagaa cgaggtatga ttacgcgctc atccacatag
    22441 aaatcaaact ctccctgcca tgcctggtgt gtcaaataag cggctggaat gtgttcgaca
    22501 gcacgacgct caataaccgc cagcacttcc tctttttcag cttccaagag ttttgcatca
    22561 agatatgggg caagcatatc caaaggcaaa ttcaaagtat gcagaatcaa ataagctgct
    22621 tcatcatgcg cattatctgt tccatgacca aaaaagagcc ctgcctcatt aaaacggctg
    22681 actgcaaaac gtaaaatatc gcggatagtc gtcaattctt gtgctgcctg attaaacata
    22741 atatgaacca ttctgcgtat agatactttt aattataaca gaaacaacaa gcaaaccttt
    22801 tcatatcgcc aaataaccac ccaatctacc catacaacta cataaatgcc cgcgcgaaaa
    22861 ccatcgcccg aacggaaacg acaatggccg acggtatggg caatctgatt ggctgggaaa
    22921 aaacggggct tgttgtcggt aagcagtgga taaccgcaaa agacgacaag gtgtccgatg
    22981 tctgcaatgc caacggcgag atgggcgtaa tcgggcttta cgagcctttc tcacacggcg
    23041 cattgacgat acccggtcat ccgaactgcc gatgcgaggt tgtttccgta tcgggtggcg
    23101 aattggggga atttgccgaa aaaaaggagc ttcgtaaagc ggctatgcag tatgcgcggg
    23161 ataactttat cggcaaaagc tatgtcaata aaaacagcgg gcatgaactg aaggtaactt
    23221 ggcaaggtgt gaaacacgct gcgtcaaagg caaatcaggc ggaattatcc atcatgacaa
    23281 aacttgatga cttattgcgc tacgcaaaat atgagggttc ttattcggat aggaaaggtc
    23341 atcctaatat tattgcagca cataagtatc gtgccgttgc caaggttggg aatgagtctt
    23401 taaatatcgg tgtgattgta agggaatttc cagacgacca taaacattac gaccatttca
    23461 tcttgaagga tgaataaagc ccttttgcag tgtcgttctg gagcggatag cgttaaggca
    23521 agtacacttc cagccttgaa aaagggcttt aaattcagca tgccatttat acaggcagga
    23581 gtaaacccat gacaaagtta tacgcagaaa tcgccaagat ggagacgcag gacgacgaca
    23641 cggtcaaggt ttggggttac gcttcaagcg aggaaatcga ttcggacggc gaagtcatcg
    23701 cggcggcagc tatgaaggcg gcgattcccg attatatgaa gtttggcgcg gggcgcgaga
    23761 tgcacggctc aaacgctgcg ggaacggcaa ttgaaatcaa cgttgaagac gacggcataa
    23821 cctttttcgg tgctcatatc atcgaccccg ttgtcgtgtc gaaagtcaaa acaggcgttt
    23881 acaaaggctt ttccatcggc ggcagcgtta ccgcccgcga tgatttgaac aagtcgcaaa
    23941 tcacgggctt gaagctgacg gaaatcagcc ttgtcgagcg ccctgccaat cccgatgcgg
    24001 tgtctacctg ctttaaggcg gacaaaggtg cggaagcggt aaacaacgat acagaacata
    24061 atgctacata ttttagccat ttcccttcca aacaaaaaag caccgacggc
//
LOCUS       DBBZXW010000018        23602 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.018, whole genome shotgun sequence.
ACCESSION   DBBZXW010000018 DBBZXW010000000
VERSION     DBBZXW010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23602
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.018"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            264..908
                     /gene="rplC"
                     /locus_tag="ACJJD2_000663"
     CDS             264..908
                     /gene="rplC"
                     /locus_tag="ACJJD2_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HGG7579251.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            908..1528
                     /gene="rplD"
                     /locus_tag="ACJJD2_000664"
     CDS             908..1528
                     /gene="rplD"
                     /locus_tag="ACJJD2_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HGG7579252.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLARDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1525..1839
                     /gene="rplW"
                     /locus_tag="ACJJD2_000665"
     CDS             1525..1839
                     /gene="rplW"
                     /locus_tag="ACJJD2_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HGG7579253.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1845..2678
                     /gene="rplB"
                     /locus_tag="ACJJD2_000666"
     CDS             1845..2678
                     /gene="rplB"
                     /locus_tag="ACJJD2_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HGG7579254.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2685..2963
                     /gene="rpsS"
                     /locus_tag="ACJJD2_000667"
     CDS             2685..2963
                     /gene="rpsS"
                     /locus_tag="ACJJD2_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HGG7579255.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            2972..3301
                     /gene="rplV"
                     /locus_tag="ACJJD2_000668"
     CDS             2972..3301
                     /gene="rplV"
                     /locus_tag="ACJJD2_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HGG7579256.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3311..4003
                     /gene="rpsC"
                     /locus_tag="ACJJD2_000669"
     CDS             3311..4003
                     /gene="rpsC"
                     /locus_tag="ACJJD2_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HGG7579257.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            3987..4403
                     /gene="rplP"
                     /locus_tag="ACJJD2_000670"
     CDS             3987..4403
                     /gene="rplP"
                     /locus_tag="ACJJD2_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HGG7579258.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4403..4594
                     /gene="rpmC"
                     /locus_tag="ACJJD2_000671"
     CDS             4403..4594
                     /gene="rpmC"
                     /locus_tag="ACJJD2_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HGG7579259.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4594..4857
                     /gene="rpsQ"
                     /locus_tag="ACJJD2_000672"
     CDS             4594..4857
                     /gene="rpsQ"
                     /locus_tag="ACJJD2_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HGG7579260.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5080..5448
                     /gene="rplN"
                     /locus_tag="ACJJD2_000673"
     CDS             5080..5448
                     /gene="rplN"
                     /locus_tag="ACJJD2_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HGG7579261.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5460..5783
                     /gene="rplX"
                     /locus_tag="ACJJD2_000674"
     CDS             5460..5783
                     /gene="rplX"
                     /locus_tag="ACJJD2_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HGG7579262.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5793..6332
                     /gene="rplE"
                     /locus_tag="ACJJD2_000675"
     CDS             5793..6332
                     /gene="rplE"
                     /locus_tag="ACJJD2_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HGG7579263.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6335..6640
                     /gene="rpsN"
                     /locus_tag="ACJJD2_000676"
     CDS             6335..6640
                     /gene="rpsN"
                     /locus_tag="ACJJD2_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HGG7579264.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6656..7048
                     /gene="rpsH"
                     /locus_tag="ACJJD2_000677"
     CDS             6656..7048
                     /gene="rpsH"
                     /locus_tag="ACJJD2_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HGG7579265.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7062..7595
                     /gene="rplF"
                     /locus_tag="ACJJD2_000678"
     CDS             7062..7595
                     /gene="rplF"
                     /locus_tag="ACJJD2_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HGG7579266.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRTFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7609..7962
                     /gene="rplR"
                     /locus_tag="ACJJD2_000679"
     CDS             7609..7962
                     /gene="rplR"
                     /locus_tag="ACJJD2_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HGG7579267.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            7981..8499
                     /gene="rpsE"
                     /locus_tag="ACJJD2_000680"
     CDS             7981..8499
                     /gene="rpsE"
                     /locus_tag="ACJJD2_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HGG7579268.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8492..8677
                     /gene="rpmD"
                     /locus_tag="ACJJD2_000681"
     CDS             8492..8677
                     /gene="rpmD"
                     /locus_tag="ACJJD2_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HGG7579269.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLCRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8679..9113
                     /gene="rplO"
                     /locus_tag="ACJJD2_000682"
     CDS             8679..9113
                     /gene="rplO"
                     /locus_tag="ACJJD2_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HGG7579270.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9125..10435
                     /gene="secY"
                     /locus_tag="ACJJD2_000683"
     CDS             9125..10435
                     /gene="secY"
                     /locus_tag="ACJJD2_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HGG7579271.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10440..10658
                     /gene="infA"
                     /locus_tag="ACJJD2_000684"
     CDS             10440..10658
                     /gene="infA"
                     /locus_tag="ACJJD2_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HGG7579272.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10679..10792
                     /gene="rpmJ"
                     /locus_tag="ACJJD2_000685"
     CDS             10679..10792
                     /gene="rpmJ"
                     /locus_tag="ACJJD2_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HGG7579273.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10858..11220
                     /gene="rpsM"
                     /locus_tag="ACJJD2_000686"
     CDS             10858..11220
                     /gene="rpsM"
                     /locus_tag="ACJJD2_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HGG7579274.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11240..11635
                     /gene="rpsK"
                     /locus_tag="ACJJD2_000687"
     CDS             11240..11635
                     /gene="rpsK"
                     /locus_tag="ACJJD2_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HGG7579275.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11655..12275
                     /gene="rpsD"
                     /locus_tag="ACJJD2_000688"
     CDS             11655..12275
                     /gene="rpsD"
                     /locus_tag="ACJJD2_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HGG7579276.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12301..13287
                     /gene="rpoA"
                     /locus_tag="ACJJD2_000689"
     CDS             12301..13287
                     /gene="rpoA"
                     /locus_tag="ACJJD2_000689"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HGG7579277.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13311..13679
                     /gene="rplQ"
                     /locus_tag="ACJJD2_000690"
     CDS             13311..13679
                     /gene="rplQ"
                     /locus_tag="ACJJD2_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HGG7579278.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13826..14539
                     /gene="minC"
                     /locus_tag="ACJJD2_000691"
     CDS             13826..14539
                     /gene="minC"
                     /locus_tag="ACJJD2_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HGG7579279.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNMHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14568..15383
                     /gene="minD"
                     /locus_tag="ACJJD2_000692"
     CDS             14568..15383
                     /gene="minD"
                     /locus_tag="ACJJD2_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HGG7579280.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15387..15650
                     /gene="minE"
                     /locus_tag="ACJJD2_000693"
     CDS             15387..15650
                     /gene="minE"
                     /locus_tag="ACJJD2_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HGG7579281.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15654..16574
                     /gene="oxyR"
                     /locus_tag="ACJJD2_000694"
     CDS             15654..16574
                     /gene="oxyR"
                     /locus_tag="ACJJD2_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HGG7579282.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16905..19742)
                     /locus_tag="ACJJD2_000695"
     CDS             complement(16905..19742)
                     /locus_tag="ACJJD2_000695"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HGG7579283.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     NLDREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFAMPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQVEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIGLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFGQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEAQQVATL
                     PESEDAPVAVCNGARLMLKVEIDKATETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQTQLSKLKD"
     gene            complement(19839..20648)
                     /gene="zupT"
                     /locus_tag="ACJJD2_000696"
     CDS             complement(19839..20648)
                     /gene="zupT"
                     /locus_tag="ACJJD2_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HGG7579284.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            complement(20829..22085)
                     /locus_tag="ACJJD2_000697"
     CDS             complement(20829..22085)
                     /locus_tag="ACJJD2_000697"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HGG7579285.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAKGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEGRKKGTLQIFRQAKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     HFNQTISRIDHNGLRIKTVETETGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            complement(22164..23555)
                     /locus_tag="ACJJD2_000698"
     CDS             complement(22164..23555)
                     /locus_tag="ACJJD2_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7579286.1"
                     /translation="MQVFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
BASE COUNT         6140 a         4981 c         6007 g         6474 t
ORIGIN      
        1 catcaaccat attccggttt gtcggagaaa gatgcatacg ctgtgatgac cggataccga
       61 ccctttaaaa gagtccgacc ctatgccgtc tgaaaattca aaacgcttca gacggcatat
      121 tgaagatatt tctgatattt ctgttgatat ttctttaact tgtcagatat aatgccgagc
      181 ttggtacatt tgtgccaagt ttaactttgt ctgaaagaca ggccaatcgc agcctgtccc
      241 tttactttaa aaggaaaata atcatgactt taggtctggt tggacgcaaa gttggtatga
      301 cccgcgtgtt cgacgaacag ggtgtttctg ttccggtaac cgttttggat atgtcagcca
      361 accgcgtcac acaagtaaaa tccaaagata ctgacggcta tactgccgtt caagttacct
      421 ttggtcagaa aaaagccaat cgtgtcaaca aagccgaagc cggacacttt gcaaaagcag
      481 gtgttgaagc cggtcgcggt ttgattgagt ttgctttgac tgaagaaaaa ttagctgaat
      541 tgaaagccgg tgacgaaatc accgtttcta tgtttgaagt tggtcaactg gtcgatgtaa
      601 ccggtacctc taaaggtaaa ggtttctccg gtacgatcaa acgtcataac ttcggcgccc
      661 agcgtacttc ccacggtaac tcccgttctc accgtgttcc aggctctatc ggtatggcgc
      721 aagacccggg tcgcgtgttc cccggtaaac gcatggccgg ccaatacggc aacaccaaag
      781 caactgttca aaaattggaa gttgtccgtg ttgacgcaga acgccaactg ctgttggtta
      841 agggtgctgt tccaggtgcg gtcaacagcg atgttgtagt tcgtcccagc gtgaaagtag
      901 gtgcgtaatg gaattgaaag taattgacgc taaaggacaa gtttcaggca gtctgtctgt
      961 ttctgatgct ttgttcgccc gcgaatacaa tgaagcgttg gttcatcagc tggtaaatgc
     1021 ctacttggca aacgcccgct ctggtaaccg tgctcaaaag acccgtgccg aagtaaaaca
     1081 ctcaaccaaa aaaccatggc gtcaaaaagg taccggtcgc gcccgttccg gtatgacttc
     1141 ttctccgctg tggcgtaaag gcggtcgcgc gttcccgaac aaacccgacg aaaacttcac
     1201 tcaaaaagta aaccgcaaaa tgtaccgtgc cggtatggcg actattctgt cccaattggc
     1261 tcgtgacgag cgtttgtttg cgattgaggc gttgactgcc gaaactccta aaaccaaggt
     1321 ttttgctgaa caagtgaaaa atctaggtct ggagcaagtg ttgtttgtaa ccaaacagct
     1381 cgacgagaat gtttacttgg cttcacgcaa cttgccaaac gtgttggttt tggaagctca
     1441 acaagttgat ccttatagct tgctgcgtta caaaaaagta atcatcacta aagatgcagt
     1501 tgcacaatta gaggagcaat gggtatgaat caacaacgtt tgactcaagt gattttggca
     1561 cctatcgttt ctgaaaaaag caacgtattg gctgaaaaac gcaaccaaat gacgtttaag
     1621 gttttggcaa atgcaaccaa acctgaaatc aaagctgctg ttgagctgct gtttggtgtt
     1681 caagttgctt ctgtaactac cgttacaact aaaggcaaaa ctaagcgttt tggtcgtact
     1741 ttgggccgcc gcagcgatgt taaaaaagct tatgtaagct tggctgccgg tcaagagttg
     1801 gatttggaag ccgctgctgc agctgcagat aaggaataaa caaaatggca atcgttaaaa
     1861 tgaagccgac ctctgcaggc cgtcgcggca tggttcgcgt ggtaacagaa ggtttgcaca
     1921 aaggtgcacc ttatgcgcct ttgcttgaaa agaaaaattc tactgccggc cgtaacaata
     1981 atggtcatat caccacccgt cacaaaggcg gcggtcataa acaccattac cgtgttgtag
     2041 actttaaacg taacaaagac ggcattcctg ccaaagtaga gcgtatcgaa tacgatccta
     2101 accgtactgc cttcatcgca ctgttgtgct atgcagacgg cgagcgtcgt tacatcatcg
     2161 ctcctcgcgg tattcaagtc ggtgccgtat tggtttccgg tgctgaagct gccatcaaag
     2221 taggcaacac cctgccgatc cgcaacattc ccgttggtac gactatccac tgtatcgaaa
     2281 tgaaacccgg taaaggtgct caaatcgcac gttctgccgg tgcttctgcg gtattgctgg
     2341 ctaaagaagg cgcgtacgct caagtccgcc tgcgctctgg cgaagtccgt aaaatcaacg
     2401 tagattgccg tgcaaccatc ggtgaagtcg gtaacgaaga gcaaagcctg aaaaaaatcg
     2461 gtaaagccgg tgccaatcgt tggcgcggta ttcgtccgac tgtacgtggt gttgtcatga
     2521 accctgtcga tcacccgcat ggtggtggtg aaggccgtac gggcgaggcc cgcgaaccgg
     2581 tcagcccatg gggtactcct gctaaaggct accgcactcg taataacaaa cgcacggata
     2641 acatgattgt tcgtcgccgt tactcaaata aaggttaatt tagtatggct cgttcattga
     2701 aaaaaggccc atatgtagac ctgcatttgc tgaaaaaagt agatgctgct cgcgcaagca
     2761 acgacaaacg cccgattaaa acctggtctc gtcgttctac cattctgcct gattttatcg
     2821 gtctgaccat tgctgtgcac aacggccgca cccatgtgcc tgtgtttatc agcgacaata
     2881 tggttggtca taaattaggc gaattctcat tgacccgtac ctttaaaggc cacttggccg
     2941 ataaaaaggc taaaaagaaa taaggtgaat catgagagta aatgcacaac ataaaaatgc
     3001 ccgtatctct gctcaaaagg ctcgtttggt agctgatttg attcgtggta aagacgttgc
     3061 ccaagctttg aatattttgg ctttcagtcc taaaaaaggt gccgagctga ttaaaaaagt
     3121 attggagtca gctattgcta atgccgagca caataacggt gcggacattg atgaactgaa
     3181 agtggtaact atctttgttg acaaaggccc aagcttgaaa cgttttcaag ctcgcgccaa
     3241 aggtcgcggt aaccgcatcg aaaaacaaac ttgtcatatc aatgtgacag tgggtaacta
     3301 aggaaaagct atgggacaaa agattaaccc tacaggcttt cgcctggcgg taactaaaga
     3361 ctgggcttca aaatggtttg ctaaaagcac cgacttttct actgttttga agcaggatat
     3421 cgatgttcgc aattatttgc gtcaaaaatt ggccaatgct tcggttggtc gagtggttat
     3481 tgaacgccct gcaaaatctg cacgcattac cattcactcc gctcgtccgg gtgtggttat
     3541 cggtaaaaaa ggtgaggata tcgaggtttt gaaacgtgac ttgcaagtct tgatgggtgt
     3601 acctgttcat gtaaatattg aagagattcg ccgtcctgag ttggatgctc aaattattgc
     3661 tgacggtatt gcccagcagt tggaaaagcg cgttcaattc cgtcgtgcta tgaaacgagc
     3721 aatgcaaaat gcaatgcgtt ctggtgctaa aggcattaag attatgactt caggccgtct
     3781 gaatggtgcg gatattgccc gtagtgaatg gtatcgtgaa ggtcgcgtgc cactgcatac
     3841 tttacgtgca aatgtagatt atgcaaccag cgaagcgcac accacatatg gtgtattggg
     3901 tctgaaagtt tgggtttata cggaaggcaa tattaaatct tccaaacctg aacatgagag
     3961 taaacaaaga aaggcaggta gacgtaatgc tgcagccaac tagactgaaa taccgtaagc
     4021 aacaaaaggg tcgcaatact ggcatcgcta ctcgcggtaa taaggtaagt ttcggtgagt
     4081 tcggcttgaa agccgtaggt cgtggtcgtt tgactgcccg tcaaatcgaa gctgctcgtc
     4141 gtgcaatgac ccgtcatatc aaacgtggtg gtcgtatttg gattcgtgta ttccctgata
     4201 aaccgattac tgaaaagcct attcaagttc gtatgggtgg cggtaaaggt aacgtggaat
     4261 attacattgc cgaaattaaa ccaggtaaag tgttgtatga aatggatggc gttccagagg
     4321 aactggctcg tgaagcattc gagttggctg ctgccaaatt gcctattcct acaacctttg
     4381 tagtaagaca ggtgggtcaa taatgaaagc aaatgaattg aaagacaaat ccgttgagca
     4441 gttgaatgca gatttgttgg acttgttgaa agctcagttt ggcttacgta tgcaaaacgc
     4501 taccggtcaa ttaggcaaac caagtgaatt gaaacgtgta cgtcgcgata ttgctcgtat
     4561 taaaaccgtt ttaactgaaa aaggtgctaa gtaatgagcg aaactaaaaa tgttcgtact
     4621 ttgcaaggca aagtagtaag cgacaaaatg gataaaaccg taacagtatt ggttgagcgt
     4681 aaagtaaaac atccgctgta tggtaagatt attcggttat ctactaaaat ccatgcccat
     4741 gatgaaaata atcaatatgg aattggtgat gtggttgtta tatcggaatc ccgtccattg
     4801 tcaaaaacta aatcttgggt tgtcagtgag ctggttgaga aagcacgttc tatttaagaa
     4861 ttaaagcaac gtgcttggaa tgggaaacga agtattgcag caaatttaat ttgcgtgtaa
     4921 acttcgtttc ctgtctttca gtttcttctg gaagtttctt cccttttcgg ggtccaagac
     4981 tggtttactt gaaccgcaag gtttcattta ataagcagcg gctttgctgt aagttatctg
     5041 aaagtggtaa attaagttgg ttaatttaaa ggtaataaca tgattcaaat gcagaccatc
     5101 ttagatgtgg ctgataactc tggtgcgcgt cgcgtaatgt gtatcaaggt attgggcgga
     5161 tctaagcgtc gctacgcttc tgttggcgat attattaaag tggcagttaa agatgcggct
     5221 ccgcgtggcc gtgtcaaaaa aggcgatgta tataatgcgg tagttgttcg tactgctaag
     5281 ggtgtacgtc gtcctgatgg tgcgttaatt aaattcgata acaatgccgc cgtgttactg
     5341 aataataaac ttgaaccttt gggtactcgt atctttggtc cggtaacccg tgaattgcgt
     5401 actgagcgat ttatgaaaat cgtttcattg gcacctgaag tattataagg aatggcacga
     5461 tgaataaaat cattaaaggc gatagggttg tagtaattgc tggtaaggat aaaggtaagc
     5521 agggtcaagt agttcgagtg ttgggtgata aagttgttgt tgagggcgtt aatgttgtaa
     5581 aacgccatca aaaacctaat ccaatgcgtg gcattgaggg cggtattatt actaaagaaa
     5641 tgcctttgga tatttctaat atcgcaatcc tgaatccgga aactaataaa gcggaccgtg
     5701 ttggtattaa gctgattgaa aatgaaggca aagttaaacg cgttcgtttc ttcaaatcaa
     5761 atggctctat cattggggca taaggagata acatggctcg gttgagagag ttttataaag
     5821 agacagttgt tcctgaattg gttaaacaat ttggttacaa atcagtaatg gaagtcccgc
     5881 gtattgaaaa aattaccttg aatatgggtg tgggtgaggc tgttgctgat aaaaaagtta
     5941 tggaacatgc tgtttccgat ttagagaaaa ttgccggtca aaaaccggtt gttactgttg
     6001 cccgtaaatc tatcgcaggt tttaaaatcc gtgataacta tccggttggt tgcaaagtaa
     6061 cattgcgtcg tgatcaaatg tttgaattct tggatcgttt gattactatt gcattacctc
     6121 gcgtacgtga cttccgtggt gtgagcggta aatcatttga tggccgtggc aattacaata
     6181 tgggtgttcg tgagcaaatt atttttccgg aaattgaata cgataaaatt gatgctttgc
     6241 gtggtttgaa tattactatt actactacag caaaaaccga tgaggaagcg aaagctttat
     6301 tgtcattgtt taaatttccg ttcaaaggat aatcatggct aagaaagcac ttattaatcg
     6361 tgatctgaaa cgtcaagctt tggctaaaaa atatgcggct aaacgcgcgg caattaaagc
     6421 ggtaatcaat gattcgaatg caactgagga agagcgtttt gaggctcgtt tgaggtttca
     6481 atccattcct cgtaatgcgg cacctgtgcg tcaacgtcgt cgttgtgctt tgacaggtcg
     6541 ccctcgtggt actttccgta aatttggttt gggtcgtatt aaaatccgtg aaatcgccat
     6601 gcgtggcgaa attccgggtg ttgttaaagc cagctggtaa taggagtaat taagaatgag
     6661 tatgcatgat cctatttccg atatgttgac tcgtatccgc aatgcgcaac gtgctaataa
     6721 agcagcggtt gcaatgcctt cttcaaaatt aaagtgtgct attgcaaagg tattgaaaga
     6781 agaaggatat attgaggact tcgcagtttc atctgacgta aagtctatat tggaaattca
     6841 attaaaatac tatgcaggtc gtcctgtaat tgaacaaatc aagcgtgtat ctcgccctgg
     6901 tttgcgtatt tataaagcgt ctagtgagat tccaagtgtt atgaatggct tgggtattgc
     6961 tattgttagt acttctaaag gtgtaatgac tgatcgtaaa gcacgttctc aaggtgttgg
     7021 tggtgagttg ttatgcattg tagcctagtg gaggaaaaga aatgtcacgt gtcgcaaaaa
     7081 acccagtgac tgttcccgct ggtgtagaag taaaatttgg aacagaggca ttagttatta
     7141 agggtaagaa cggtgaattg tcttttcctt tgcattctga tgtagccatt gaatttaatg
     7201 atggcaaatt gacttttgtt gcgaataaca gcagtaaaca agcaaatgca atgtctggta
     7261 ctgctcgcgc attagtcagc aatatggtta aaggtgtttc agaaggtttt gagaaaagat
     7321 tgcaattgat aggtgtgggt tatcgtgctc aagcacaagg taaaatcttg aatctgtctt
     7381 tgggtttttc tcatccgatc gtatatgaaa tgcctgaagg tgtctccgtt caaactccta
     7441 gccaaacaga gattgtttta accggctcgg ataaacaagt tgttggtcaa gttgctgctg
     7501 agattcgtac gttccgtgct cctgagcctt ataaaggtaa aggtgttcgc tatgtaggcg
     7561 aagtagtggt aatgaaagaa gccaagaaaa aataattgag gttcactaat ggataaacat
     7621 acaacccgac tccgtcgtgc acgcaaaacc cgtgctcgta ttgcggactt gaaaatggta
     7681 agattatgtg tgttccgaag caataatcat atttatgctc aagtaattag tgctgaaggt
     7741 gataaagtat tggctcaagc ctctacattg gaagctgagg tgcgcggtag tctgaaatct
     7801 ggaagcaatg ttgaagcagc tgcaatagtt ggtaaacgta ttgctgagaa ggctaaagca
     7861 gcaggtgtag aaaaggttgc ttttgatcgt tcaggtttcc aatatcacgg tcgtgtgaag
     7921 gctttggctg aagctgctcg tgaaaatggt ttaagcttct aaatatttgg agactttcag
     7981 atggcaaaac atgaaattga agaacgcggt gacggtctga ttgaaaagat ggtcgcagtt
     8041 aaccgtgtaa ccaaagtagt taaaggtggt cgcattatgg ctttctctgc gctaactgtt
     8101 gttggtgatg gagatggtcg tattggtatg ggtaaaggta agtcaaaaga agtgcctgtt
     8161 gcagtccaaa aggcgatgga tcaagcacga cgctctatga ttaaggtacc attaaaaaat
     8221 ggtacgattc atcatgaggt tattggtcga catggtgcta ctaaagtatt tatgcagcct
     8281 gctaaagagg gtagtggcgt aaaagccggt ggacctatgc gtttggtttt tgatgctatg
     8341 ggcattcata atatctccgc caaagtgcac ggatctacta acccatataa tatcgtacgt
     8401 gcaacattag atggtttgtc taagttgcat actcctgctg atatcgcagc caaacgtggc
     8461 ttgacagtgg aagacatttt gggagttaac catggctgaa caaaaaaaga ttagggttac
     8521 attggttaaa agcctgattg gtacaattga atctcatcgt gcatgtgcac gcggtttagg
     8581 tttgtgtcgt cgcgagcata cggtagaggt tttagatacc cctgaaaacc gtggtatgat
     8641 taataaaatc agctacttgt tgaaagtgga gtcttgatat gtttttgaat acaattcaac
     8701 ctgctgttgg tgctacgcat gctggtcgtc gtgttggacg cggtattggt agtggtcttg
     8761 gcaaaacggg tggtcgtggt cataaaggtc aaaagagccg gtctggtggg tttcataagg
     8821 tgggtttcga gggtggtcaa atgcccttgc aacgacgcct ccctaaaaga ggttttaaat
     8881 ctttaacagc atcagctaat gcacagcttc gtttaagtga actggaatca attgctgtta
     8941 atgagattga tattttggtc ttaaagcaag cgggtctgat tgcatctaca gtctctaatg
     9001 ttaaagttat tgcttctggt gaaatttcta aggcagttgc tttgaagggt attaaagtta
     9061 ccaaaggtgc gagagctgct atcgaggctg ttggtggtaa gattgaaatg taaggtttaa
     9121 tattgtggct aatcaacaaa cgtcatcagg ttcatccaaa tttggagatc ttaagaaacg
     9181 tcttttgttt ctatttggag cattgattgt ttttcgaatt ggtgcccata tacccgtacc
     9241 tggagttgat gctgttgctt tagctaaatt atacgaaagc gctggaaacg gcatcctggg
     9301 aatattgaat atgttttccg gtgggtcgtt agagcgcttt agtatatttg caataggaat
     9361 tatgccatat atttcagctt ctattattgt acagctcgct tctgaaattt tgccatcatt
     9421 gaaggcttta aaaaaagaag gggaggctgg tagaaaggta attacgaaat atactaggta
     9481 tggtactgtt ttgttagcaa ttcttcaaag tctaggtgtt gcatctttcg tatttcagca
     9541 aggaattgtt gtaacaagtt catttgagtt tcatgtttcc acggtagttt ctttggtaac
     9601 gggaaccatg tttcttatgt ggcttgggga gcaaattact gaaaggggta tcgggaacgg
     9661 tatttcttta atcattacgg caggtattgc ttcaggtatt ccttcgggta ttgcaaagct
     9721 ggttacactg acgaaccaag gttctatgag catgcttacg gcgttgttta ttgtatttgg
     9781 tgccttatta ttaatttatt tggttgtata ctttgaaagt gcacagcgga agattcctat
     9841 tcattatgca aaacgccagt ttaatggtag ggcgggtagt caaaatacgc atatgccttt
     9901 caagttgaat atggctggtg ttattccccc aatttttgct tccagtatta ttctatttcc
     9961 atctactctt ttaggttggt ttggttcggc tgatacaaat agtgttttgc acaaaatagc
    10021 tggattgtta caacacggtc aattgctgta tatggcttta tttgcagcga cagttatttt
    10081 cttttgttat ttttatacgg ctttggtttt tagccctaaa gaaatggcag agaatttaaa
    10141 aaagagtggt gcttttgttc ctgggattag acctggtgag cagacctcta ggtatttaga
    10201 aaaagttgta ttacgtttga cattgtttgg agctctttat attacaacta tttgtttaat
    10261 tccagagttc ttaactacgg ttttaaatgt acctttttat ttgggtggca cgtctttgtt
    10321 gattctagtt gttgtaacga tggattttag tacacaaata aattcgtata ggcttactca
    10381 acagtatgat aagttaatga ctcgttcaga aatgaaatca ttttctcgga aatagaatta
    10441 tggcgaaaga agatactatc caaatgcaag gtgaaattct tgaaacttta cctaatgcaa
    10501 catttaaagt aaaacttgag aatgaccata ttgtattggg tcatatttct gggaagatgc
    10561 ggatgcatta cattcgtatt tctccgggag ataaggtcac agtagagctg acaccttatg
    10621 atctaactag ggctcgaatc gttttcagag caagataaac caataaaagg aaaataaaat
    10681 gcgtgtacaa ccatctgtta agaaaatttg ccgaaattgc aagattattc gtcgaaatcg
    10741 tgtagttcgt gtaatttgta ctgatctccg tcacaaacag cgtcaaggtt aatggaatat
    10801 ttcttttaat gtgattctgt gatatagtga cacactttgc cctaaaaagg aaaaaatatg
    10861 gctcgtattg caggggtaaa tatccctaat aacgcacaca tcgtaattgg tcttcaggct
    10921 atttacggta ttggtgctac tcgtgctaaa ttgatttgtg aggctgcaaa tattgcgcct
    10981 gatactaaag caaaagattt ggacgagact caattagatg ctttgcgtga ccaagttgcc
    11041 aagtatgaag tagaaggtga tttgcgtcgt gaggtaacta tgagtatcaa gcgattgatg
    11101 gacatgggct gctatcgtgg cttccgtcat cgtcgcggct taccatgccg cggtcaacgc
    11161 actcgtacaa atgcgcgtac ccgcaaaggt ccgcgtaaag cgattgctgg taagaaataa
    11221 attttaagga attttattaa tggctaaagc aaacacagct tcacgtgtac gtaaaaaagt
    11281 acgtaaaacc gtgagtgagg gtattgtgca cgttcatgca tctttcaaca ataccatcat
    11341 tacaatcact gaccgtcaag gcaatgcgtt gtcttgggct acctctggcg gcgctggttt
    11401 taaaggttct cgtaaaagta caccatttgc agcacaagtt gcagcagaag cagctggtaa
    11461 agttgcccaa gagtatggcg ttaaaaattt agaggttcgt attaaaggtc caggtccagg
    11521 tcgtgaatcc tctgtacgtg ctttgaatgc tcttggtttc aagattacca gcattactga
    11581 cgttaccccg ttgcctcata acggttgccg tccgcctaaa aaacgtcgta tttaatattg
    11641 gagtgatttg aaacatggca cgttatattg gccctaaatg taagttggca cgtcgcgaag
    11701 gtacggattt gtttttgaag agtgcgcgcc gctctttgga ttccaaatgt aaaattgatt
    11761 ccgctcccgg tcagcatggt gcaaaaaaac cgcgtttgtc agactatggt ttgcagttgc
    11821 gtgaaaaaca aaaaatccgc cgtatttatg gcgtattaga acgtcagttc cgtcgttatt
    11881 tcgcagaagc tgatcgtcgt aaaggttcta ccggcgagtt gctgttgcag ttgctggaat
    11941 ctcgtttgga taatgtcgtt tatcgtatgg gtttcggttc tacccgagct gaagcaagac
    12001 agcttgtttc tcataaggcg atagttgtga atggacaagt tgtcaatatt ccttctttcc
    12061 aagtgaaagc tggtgatgtt gtctcagttc gtgaaaaagc caaaaaacag gtacgtattc
    12121 aagaagcatt gggtttggca actcaaatcg gcttgccggg ttgggtttct gtagatgcgg
    12181 ataaacttga gggtgtgttc aaaaacatgc cggatcgctc ggaattgacc ggtgatatta
    12241 atgaacagct ggtggtagag ttctactcta aataatgcta gctcagtgag ggacagttaa
    12301 atgcagaata gcacaaccga atttttgaaa cctcgtcaaa ttgatgtaaa tactttttct
    12361 gcaactcgtg caaaagtatc tatgcagcca tttgaacgtg gtttcggtca taccttaggt
    12421 aatgctttgc gccgtatctt actgtcatcc atgaatggtt ttgctcctac tgaagtagct
    12481 attgccggtg tattacacga atattctact gttgatggta ttcaggaaga tgttgttgac
    12541 attttgctga atattaaagg tattgtgttt aaactccatg gtcgtagcca agttcaactt
    12601 gtgttgaaga aatcaggttc aggtgtcgta tctgccggtg atattgagtt gccgcatgat
    12661 gtagaaattc tgaatcctgg tcatgtcatt tgtcatttgg ctgataacgg tcaaattgag
    12721 atggaaatta aagtagagca aggtcgtggt tatcaatctg tttcaggtcg tcaggtagtt
    12781 cgtgatgaga accgtcagat tggtgcaatc cagttggatg cgagcttttc gcccatcagc
    12841 cgtgttagct ttgaggttga acctgcacgt gtagagcagc ggacggatct tgataagttg
    12901 gttttggata tcgaaaccga cggttctatt gatcctgagg aagctgtacg cagtgcggca
    12961 cgtattttga ttgatcagat gtctattttt gctgatttgc agggtactcc tgtggaggag
    13021 gttgaagaaa aagcacctcc tatcgaccct gttcttttgc gtccggtgga tgatctggaa
    13081 ttgacagtac gttcagctaa ttgtttgaaa gctgaggata tttattatat tggcgatttg
    13141 attcaacgca ctgaaaccga gcttcttaaa acgccgaatt tgggacgtaa atctttgaat
    13201 gagattaagg aagtattggc atctaaaggt ttgacactgg gttctaagtt ggaagcatgg
    13261 ccacctgtag gcttggaaaa gccttaatga agaattaaag gataattgat atgcgtcatc
    13321 gtaatggcaa tcgcaaatta aaccgtacca gcagtcatcg tgctgcaatg ctgcgtaata
    13381 tggcgaattc attattgact cacgaaacta ttgtaacaac tctgcctaag gccaaggaat
    13441 tgcgccgtgt agtagagccg ttgattacat tgggtaaaaa gccgtcattg gcaaaccgcc
    13501 gtttggcatt tgaccgtact cgcgaccgtg atgttgtagt aaaactgttt ggcgatttgg
    13561 gtcctcgttt tactgctcgt aacggtggtt atgttcgggt gttgaaatac ggattccgta
    13621 aaggtgataa tgcacctctg gcactggttg aattggttga caaaccggct gctgagtaat
    13681 tttagtcata taacgccatc tgccgaaaag caggtggcgt tatttttgca atatctgata
    13741 ggtaataggg tattggctat catgtttaaa atattaattg aatagctaag gtttgcgcgg
    13801 taaacttaca tcattaaaaa attctatgat ggtttatata atgaatgctt tcgatataaa
    13861 gtcgacaaag atggacgtat tgtctatatc tttgcatacg tcagacttgt ttgatttgga
    13921 agatgtgctg gtcaaattgg gcaagaagtt tcaagagtct ggtgttgttc catttgtgct
    13981 ggatgttcaa gagtttgatt atcccgagtc tttggatctt gctgcattgg tttcgttgtt
    14041 ttcaaggcat ggtatgcaaa ttttgggtct gaagcattct aatgaacgtt gggctgctgc
    14101 ggctatgaag tatcatttgc tgttttgtct gtctcattcg gaaaatgtta aagaactggg
    14161 tcaggttgag gtgcagaaca cggaggatgg tcagaaagca aggaaaacag tattgattac
    14221 atcccctgtc cgtaccggtc agcaggttta tgccgaagat ggcgatttga ttgttacggg
    14281 ggcggtcagc cagggggcgg aattgattgc agatggcaat atgcatattt atgcgccgat
    14341 gagagggcgt gctttggccg gtgccaaagg cgatacttct gcccgcatat ttatccactc
    14401 catgcaggca gaactggttt ctgtggcggg tatttaccgt aattttgaac aggatttgcc
    14461 ggaccatctg cacaagcagc cggtacagat attgttgcag gataaccgat tggttatcag
    14521 tgcaattggc tcagaataat tgtttgatat tttaaaaagg aaatattgtg gcaaaaatta
    14581 ttgtagtaac ttcaggtaag ggcggtgtcg gtaaaacgac taccagtgcc agtattgcga
    14641 caggtttggc attacgcgga tataaaactg cggtaattga ttttgatgtg ggtttgcgta
    14701 acctcgacct cattatgggt tgcgagcgtc gtgtcgttta tgacctgatc aatgtcattc
    14761 agggggaggc gacgctcaac caggctttga ttaaagataa aaattgtgaa aacctgttta
    14821 ttttgccggc ttcccagact cgggataaag acgctttgac acgcgaggga gtagaaaaag
    14881 tgatgcagga gctgtccggc aagaaaatgg gctttgagta tattatttgc gactctcctg
    14941 ccggtattga gcagggtgca ttgatggcgt tgtattttgc tgatgaagcc attgtaacga
    15001 ccaatcctga ggtttccagt gtgcgtgact ccgacaggat tttgggaatt ttgcaaagca
    15061 aatcccataa ggcagagcaa ggcggttcgg ttaaagaaca tctgttgatt acgcgttatt
    15121 ctcccgaacg tgtggcaaaa ggcgaaatgc tgtctgtaca ggatatttgc gatattctgc
    15181 atatcccttt gctgggtgtg attcctgaat cccaaaacgt cttgcaggca tccaattccg
    15241 gagaaccggt catccatcag gacagcgtgg cggcttccga ggcatataag gacgttattg
    15301 cccgtctttt gggcgagaac cgtgaaatgc gcttcttgga agctgagaaa aaaagcttct
    15361 tcaaacgtct gtttggagga taaggtatgt cattaatcga atttttattc ggcagaaagc
    15421 agaaaacggc aaccgttgcc cgcgaccgcc ttcaaatcat cattgcccaa gagcgcgccc
    15481 aagaaggtca ggctccggat tacctgccga ctttacgtaa agagttgatg gaagtcctgt
    15541 ccaaatatgt gaacgtttca ttagacaata tccgtatttc ccaggaaaaa caggatggta
    15601 tggatgtgct tgagttgaac attactttgc cggaacagaa aaaggtatag gacatgacct
    15661 taaccgaatt gcggtacatc gtcgcagtcg cccaagaacg tcatttcggc agggcggcgc
    15721 ggcgttgttt tgtcagtcag cccactttgt ctattgccat taagaaattg gaagaagagc
    15781 ttgccgtctc tttgtttgac cggagcagca acgatattat tacgaccgag gcgggggaac
    15841 gtatcgttgc acaggcgcgt aaggtattgg aagaggcgga gcttatcagg catttggcaa
    15901 atgaagaaca aaacgagctg gagggtgcgt tcaaactcgg gctgattttt acggttgcgc
    15961 cgtacctgct gccgaaactg attgtctcgt tgcgccgtac tgcaccgaaa atgcctttga
    16021 tgttggaaga gaattacacg catactttga ccgagtcgct caaacgcggg gacgttgatg
    16081 cgattatcgt tgccgaaccg tttcaagagc cgggcattgt taccgaaccc ttgtatgacg
    16141 aaccgttttt cgtgattgtc ccgaaagggc attcatttga ggaactggat gccgtttcgc
    16201 cccggatgct gggtgaggag caggttttgc tgctgacgga aggcaactgt atgcgggatc
    16261 aggtactctc aagctgttcc gaattggcgg cgaaacaacg catacagggg ttgaccaata
    16321 cattgcaggg cagctcgatc aatacaatcc gccatatggt cgccagcggt ttggcaatca
    16381 gcgtgttacc ggcaaccgcg ctgaccgaaa acgatcatat gctgttcagc attattccgt
    16441 ttgaaggtac gccgccaagc cggcgggtcg tattggcgta ccgccgcaat tttgtccgtc
    16501 cgaaggcgtt gtcggcgatg aaggcggcga ttatgcagtc gcagcttcac ggggtaagtt
    16561 ttatccgcga ctaggcgcag gcattgtttt caaaacgcca tttccctgag ccgacaacac
    16621 ggtatgccaa gatattgccg tcatcatcga ttttgagtat agcatcgcca cggaaactgc
    16681 cgtcctgaag atattcgact tttgcatcac tgtgaatgtt ttcatcagtg ccgatgcaat
    16741 gccatgtata gtggattaaa tttaaaccag tacggcgttg cctcgccttg ccgtactatt
    16801 tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta taaaagaggc
    16861 cgtctgaaaa acatttttca gacggccttg ttgattcaat caaatcagtc tttcaacttc
    16921 gacaactgag tttgcacttt tgccattttg tcttccaatt ccgccaaatc ggctttgtct
    16981 ttttccacca aatgcgccgg ggctttttcg gtgtagccgg gtttggagag tttggcgttg
    17041 agtttgtcca aggctttttg cagcttttcg gcttctttgc tcaaacgggc ggtttcggtg
    17101 gctttgtcga tttcgacttt cagcatcagg cgcgcgccgt tgcagacggc gacgggcgcg
    17161 tcttcgcttt cgggcagggt ggcgacttgc tgtgcttcgg tcagtcgggt catcatcggc
    17221 aggtatttga ggtagtccgc caagtcgtct gcgctttcga caaacagcgg ggctttcacg
    17281 ttgggctgga tgcccatttc gccgcgcagg ttgcggactg cgccaatcaa atcctgtaac
    17341 acggtcattt gcccgaatgc cgtctgaaca atatcgccgc cgtcggcttc ggggaagcgg
    17401 gcgagcatga tgctgtcggc ggttttcgcg tcgcacatag gggcgacggt ttgccacagt
    17461 tcttcggtga tgaacgggat aatcgggtgc agcaggcgca gggcggcttc gagtacgcgc
    17521 aataaggtat ggcgtgtggc gcgttggcgg ctggcgcagc cggtttggag ctgcactttg
    17581 gcaagttcca gataccagtc gcaatagtcg ttccacacga agctgtacag ggtttccgcc
    17641 gccaaatcaa agcggtaggt ttcgtaggct tgcgttactt gctcgatggt ctgattcaga
    17701 cggcctacaa tccacatatc ggggaaggag tagccgcgcg gttcggcagc ggttgcgccg
    17761 taaccgcagt cttggttttc ggtgttcatc aagacgaagt tggtggcgtt ccagattttg
    17821 ttgcagaagt tgcggtagcc ttcggcgcgt ttgaagtcga agttgaccga acgccccaag
    17881 ctggcgtagc tcgccatagt gaagcgcaaa gcgtccgcgc ccatactcgg aatgccttcg
    17941 gggaagagtt ttttcgtggc ttcttccact ttcggcgcgg tttcgggttt gcgcaggccg
    18001 gtggtgcgtt ttaccagcag tttttccaag ccgatgccgt cgatcaaatc cacagggtca
    18061 atgacgttgc cttcggattt ggacattttt ttgccttcgt ggtcgcgcac gatgccgtgg
    18121 atatacacgt ctttaaacgg tactttgccg gtgaagtggg tggtcatcat aatcatacgc
    18181 gccacccaga agaagatgat ttcgtagccg gtaaccaaga cgttggacgg caggaaggct
    18241 ttgagttcgt cggtttcaga cggccagccg agcgtggaga acggcacgag cgcggaggag
    18301 aaccaagtgt ccaatacgtc ttcttcgcgg gtcaagcctg ttttgccggc ttgtttttcg
    18361 gcttccacct gattgcgggc gacgtaaaca ttgcctgctt cgtcgtacca cgcggggatt
    18421 tgatgccccc accacagttg gcgcgagatg caccagtctt ggatgttgtt catccattgg
    18481 ttgtaggtgt tgacccagtt ttcggggata aagcgtaccg cgccgctgtc gacggctttt
    18541 ttggctttgt cggcgaggct caagcctttg aattcgctgt caggctcgcc gccgtttggc
    18601 gtagcggaca tggcgacaaa ccattggctg gtcagcatcg gctcaatcac tgagcctgtt
    18661 cggtcgcctt tcggcgtcat cagcgtgtgc gctttgattt cgaccaagaa accttgttcc
    18721 tgcaaatcgg caaccatttg tttgcgcgcg gcaaagcggt ccaagcctgc gtatttttca
    18781 ggcatggcaa agcttggttg cgcttcgcct ttgaagttga acacttcggc gtttgccaat
    18841 actttggctt ccaagtcgaa cacattaacc aagcgcgtat cgtggcgttt gccgacttcg
    18901 tagtcgttga agtcgtgcgc aggcgtgatt ttcacgcagc cggtgccgaa gtctttttca
    18961 acgtattcgt cggcaatcac gggaatggtg cggccggtca gcggcaggat taattctttg
    19021 ccgattaagt gggtataacg ttcgtcttcg ggattgacgg caacggcaac gtcgcccaac
    19081 agcgtttcgg gacgggtggt ggcgacgatg acggcttcgg caggattgtc cgccagcgga
    19141 tagcggatgt gccacataga gccttgttct tccacgcttt ccacttccaa atcagacact
    19201 gcggtaccca ataccggatc ccagttcacc aagcgtttgc cgcgataaat caagccctgt
    19261 tcatacaggc gtacgaacac ttcggttacg gtttcggcgc gtacatcgtc cattgtgaaa
    19321 tactcgcgcg tccagtcggc agaacagccc acacggcgca tctgctgcgt aatcgtgccg
    19381 ccggaaactt ctttccattc ccacactttt tccaagaatt tttcacgatc caagttatga
    19441 cgggacacgt tttgcgcggc aagctgacgc tcgaccacga tttgcgtggc gatgcccgcg
    19501 tggtcggtgc cgggaatcca ggcggtgttg cagcctttca tacggtagta gcgggtcagg
    19561 ccgtccataa tggtttggtt gaaggcatga cccatgtgca gcgtgccggt tacattgggc
    19621 ggcggcagtt ggatggaaaa agacggtttg gtcaaatcca tatcaggttg gaaatagcct
    19681 tggctttccc agttttgata gtgcttggat tcgatttcgg cgggggagta tttgtctaac
    19741 atgatggaac tttgtgaaat taaggttatt tttgatgtgc ggattataac gcaaaaaggc
    19801 cgtctgaatc atttcagacg gcctttggca tacaggtttt aaaaatggaa caataccagg
    19861 ctgacggcaa tcaccgccat gcccattgtc aggccgtaaa cggtttcatg gccgtctgaa
    19921 tagcgtttgg cagccggcag cagctcgtcc aacgccaaaa acaccatcac accggctatc
    19981 acgccgaata ccgaaccaaa cacggcaggc gacaaaaacg gctgcaaaac caaatagccc
    20041 aaagccgccc ccaacggctc ggccaagccg gatagcagac acgcccacac cgttttctta
    20101 cggctgcggg tggcaaaata aaccggcgcg gcgatggaaa tgccctccgg aatattatgg
    20161 atggcaatcg ccaaggccaa aggcatcccg actgctggat tttccaatgt ggcaaaaaac
    20221 gtcgccaagc cttcggggaa attgtgcgca gtaatcgcaa acgccgccat catgccgact
    20281 cgcgcgatat ggcggcgttt gctttcttga aacgacgggt cttgcgcgtc taaagtttca
    20341 tgcgggttcg gcaccagacg gtcaatcagc gcaatgccgc ccatcccggc caaaaatgcc
    20401 atggtcgccg ccgcaaacgc gtggtcttta tcataaattt cagcgaacgc ctcgctggac
    20461 ttactgaaaa tctccgtcag ggaaacatat accatcgcac cgccggcaaa cgccaaacca
    20521 aacgacaaca cacgcggatt gggcgttttg gaaaacatca ccaagccact gcctaatacg
    20581 gtaaacaaac cggcagccaa tgtgatggaa aaggcaacgg ccaaattgga catcgaaaaa
    20641 tcgggcatga gaaaacctgc gctaaaagct gggacaggtt cagactaaca ctttttaatg
    20701 tatatgataa tagttattat ttattttatt gattggatac acggattttg aaacaaaagg
    20761 ccgtctgaaa aatgattttc agacggcctt taaatttgaa atgccgctaa accttatcgc
    20821 tttccagctt aagcctgata acgcgacagg ctcaaatcgt cgctgcggat ttcggtgtct
    20881 ttgccgctca cgatatcggc ggttaatttt gccgaaccca gcgacatggt ccagcctaaa
    20941 gtaccgtggc cggtattcag aaacaggttg tcaaagcggg tgcgaccgat taacggcgtg
    21001 ctgtcgggcg tcatcggcct gaggccgctc cagaacgatg cttggctcaa atcgccgcct
    21061 tccgggaaca agtcgttgac gaccaaagcc aaggtttcgc ggcgtttttc gggcagtttg
    21121 atttcgtagc ccgacaattc cgccataccg ccgacgcgga ttctgttgtc aaagcgcgtg
    21181 atggcgactt tgtagctttc atctaaaacg gtggacaccg gtgcgccgtc ggaatttgtg
    21241 accggcaggg tcaaggaata gcctttgacg ggataaatgg gcagattgag atccaactgc
    21301 gccaaaaccg tcctgctgaa acaaccgagc gcgcagacaa cggcatctgc ttcaaaccgc
    21361 cctgtttcgg tttcaacggt tttgatgcgc agcccgttgt ggtcgatgcg gctgatggtt
    21421 tggttgaaat gaaaccgtac gcccttttcc tgacacaatt tgtataggtt ttcagtgaag
    21481 aggcggcagt cgccggttgc atccgcaggc aggtgcaggc cgccggcaat tttggcggta
    21541 acgcgtgcca gcgcaggctc gaattctgcg cattcttcgg gcttcagacg gcggtacggc
    21601 acgccgtagc gttccaaaac ggcaatgtct tgttctgcag cttcaacttc tttagcctga
    21661 cggaaaatct gcaacgtccc ttttttgcgc ccttcaaaat tcatgccggt ttgcgcttca
    21721 aaacggcgga acatttcacg gctgtattcg gaaatcctga ccatgcgctc tttattggtt
    21781 tgatagtgcg ctgccgtgca gttttgcagc atccgccaca gccattcgat ttgatacagg
    21841 ctgccgtcgg ggcgaaacag caaaggcgga tggcttttaa acagccattt cagtgctttg
    21901 gtcggaatac cgggtgcagc ccaaggcgtg gtatagccgt aagaaagctg gcctgcattg
    21961 gcaaaactgg tttccatcgc cacacccttg gcgcggtcga tgaccgttac ttcatgtccg
    22021 gcctctgcca gataccacgc ggaagacacg ccggcaacac ccgcacctaa aacaagcact
    22081 ttcatgtttc tccctccgac tttttcaaaa cagacttaat atgccgtgcc gtctgaatat
    22141 tcggattcag acggcctcgg atattaatgc ggcaattcgc cgtttgtgat tttttgtttg
    22201 aagtcgcgcg tttcattgac gatgactttc gccatcaata aaagtgcaat caggttgggc
    22261 aatgccatca agccgttgaa tgtgtccgaa gccagccaca ccaaatcaag gctcaacacg
    22321 gtacccagca taacggaaga aacataaccc acgcggtaca aaccggcaaa tttctcgccg
    22381 aaaacataca ccgcgcattt ttcgccgtaa tagcaccagc ccaaaatggt tgagtaggca
    22441 aagaaaatca ggccgatggt aacaatccag ccgccgatgc cgggcagcat tttttggaat
    22501 gtgacggttg tcagtgccgc gccgctcact tcaggtttga caaactcgcc gcccgcgccg
    22561 agcagtccca ttaccaacac gatgccggta atcgagcaaa cgacgatggt atccaaaaac
    22621 gtaccggtca tagaaaccaa ggcctgacgg acgggatggt cggttttcgc ggctgcggcg
    22681 gcaataggcg cagaacccat acccgcctca ttggagaaca cgccgcgcgc cacgccgtag
    22741 cggatgaccg taccgatagc gccgcccgcc actgcctgcg cgctgaacgc atcggagaaa
    22801 atcagcttga cggcaggcat cagtgcatcg gaattaatcg cgataatgga aagaccgccc
    22861 aacacataaa acaccgccat agcaggcacg atgaaagaag cggctttggc gatgccttta
    22921 ataccaccta aaacgacaac ggcagtcaga acggtcaacg taatgccggt ataggcaggt
    22981 tcgataccga agctggtttg caccgcctgt gcaaccgagt tggactgcac cgagctgccg
    23041 ataccgaagg aagcgaatgt gccgaacagc gcaaacgcga cggccatcca tttccagttt
    23101 ttgcccaagc ctttttcgat gtaatacatc gggccgccgg acatttcgcc tttggaattg
    23161 ttgacgcggt atttcaccgc caacacgcct tcgccgtatt tggtggccat gccgaaaatg
    23221 gcggtcatcc acatccaaaa taccgcgccc gggccgccgg ttaccaccgc agtcgccacg
    23281 ccggcgatgt tacccgtacc gatggtggcg gacagcgcgg tcatcaacgc cgcgaaatgg
    23341 gaaatatcgc cttcgtggcc ttcgccgcct tcatacttct ttgacggcac aaatgcctgt
    23401 ttcagcgcat agcccaacat agtgaactgc aagcctttca gcataacggt cagcacaatg
    23461 ccggtgccga ccagcagcat caacataaca gatccccaga cccagccgct gacggtttcg
    23521 aaaaaggctt tgagattgtc taaaaacact tgcatggctt tctcctttgt ctgttttata
    23581 gtggattaac aaaaaccagt ac
//
LOCUS       DBBZXW010000019        22878 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.019, whole genome shotgun sequence.
ACCESSION   DBBZXW010000019 DBBZXW010000000
VERSION     DBBZXW010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22878
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.019"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(305..4474)
                     /locus_tag="ACJJD2_000699"
     CDS             complement(305..4474)
                     /locus_tag="ACJJD2_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HGG7579287.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLSWLAGTESGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISAGKAFDKPTVYLERLDASYRYDIKGHRLDLKAADTPWSNSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGNFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNVSSNYGKINGNITVGQSNSFSTSPLGGKLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGIENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4529..6376)
                     /locus_tag="ACJJD2_000700"
     CDS             complement(4529..6376)
                     /locus_tag="ACJJD2_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HGG7579288.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATVDL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDIDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTLARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6752..7981
                     /gene="sstT"
                     /locus_tag="ACJJD2_000701"
     CDS             6752..7981
                     /gene="sstT"
                     /locus_tag="ACJJD2_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HGG7579289.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8098..9576
                     /locus_tag="ACJJD2_000702"
     CDS             8098..9576
                     /locus_tag="ACJJD2_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7579290.1"
                     /translation="MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE
                     KETEAKEDAPQAGSQGQGAPSAQGGQDMAAVSEENTGNGGAAATDKPKNEDEGAQNDM
                     PQNAADTDSLTPNHTPASNMPAGNMENQAPDAGESEQPANQPDMANTADGMQGDDPSA
                     GGENAGNTAAQGTNQAENNQTAGSQNPASSTNPSATNSGGDFGRTNVGNSVVIDGPSQ
                     NITLTHCKGDSCSGNNFLDEEVQLKSEFEKLSDADKISNYKKDGKNDGKNDKFVGLVA
                     DSVQMKGINQYIIFYKPKPTSFARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVS
                     LTGHSGNIFAPEGNYRYLTYGAEKLPGGSYALRVQGEPSKGEMLAGTAVYNGEVLHFH
                     TENGRPSPSRGRFAAKVDFGSKSVDGIIDSGDGLHMGTQKFKAAIDGNGFKGTWTENG
                     GGDVSGKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9651..9866)
                     /locus_tag="ACJJD2_000703"
     CDS             complement(9651..9866)
                     /locus_tag="ACJJD2_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579291.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLKAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9859..10075)
                     /locus_tag="ACJJD2_000704"
                     /pseudo
     CDS             complement(9859..10075)
                     /locus_tag="ACJJD2_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
     gene            complement(10150..11493)
                     /gene="argG"
                     /locus_tag="ACJJD2_000705"
     CDS             complement(10150..11493)
                     /gene="argG"
                     /locus_tag="ACJJD2_000705"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HGG7579292.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEVSPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKQ"
     gene            11618..12418
                     /locus_tag="ACJJD2_000706"
     CDS             11618..12418
                     /locus_tag="ACJJD2_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HGG7579293.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFVFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALELPVVRHPEAAKFIEG
                     VTLKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYVGRFNQTKRGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12458..13444
                     /locus_tag="ACJJD2_000707"
     CDS             12458..13444
                     /locus_tag="ACJJD2_000707"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HGG7579294.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYRDRRRERMW
                     KNIWRTVSTLILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            14101..14363
                     /locus_tag="ACJJD2_000708"
                     /pseudo
     CDS             14101..14363
                     /locus_tag="ACJJD2_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(14401..14775)
                     /locus_tag="ACJJD2_000709"
     CDS             complement(14401..14775)
                     /locus_tag="ACJJD2_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7579295.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVAYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNSRVIVINLDN
                     IENHEFFNSFEDWLELAIKDTW"
     gene            complement(14772..14900)
                     /locus_tag="ACJJD2_000710"
     CDS             complement(14772..14900)
                     /locus_tag="ACJJD2_000710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579296.1"
                     /translation="MPQTWGEAIQFRIKKQIENELAPPNWSTQFPNGSIYDPKVTK"
     gene            complement(14948..15304)
                     /locus_tag="ACJJD2_000711"
     CDS             complement(14948..15304)
                     /locus_tag="ACJJD2_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HGG7579297.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITENQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(15309..15413)
                     /locus_tag="ACJJD2_000712"
     CDS             complement(15309..15413)
                     /locus_tag="ACJJD2_000712"
                     /inference="COORDINATES: protein motif:HMM:NF018014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579298.1"
                     /translation="MDDIRGIIQGAVNPLIYKVSKQKIIYNNKLISGT"
     gene            complement(15447..15791)
                     /locus_tag="ACJJD2_000713"
     CDS             complement(15447..15791)
                     /locus_tag="ACJJD2_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579299.1"
                     /translation="MNLENYENILIKLLFYHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKERFGSFMCWINTNLMEFEGVFFNDLLPD
                     NMIINNFFEIND"
     gene            complement(15950..16351)
                     /locus_tag="ACJJD2_000714"
     CDS             complement(15950..16351)
                     /locus_tag="ACJJD2_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579300.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            complement(16355..16807)
                     /locus_tag="ACJJD2_000715"
     CDS             complement(16355..16807)
                     /locus_tag="ACJJD2_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579301.1"
                     /translation="MQTKALGTVDEIGDTVQQVGKQASGQKTSGGNPAIDSDPYSPSS
                     VAARIEAGKARSDLQIKDILSNTTQRSKTKGPAVQYDKVGDYNDALNDFNSLNVRNVQ
                     TRPNGTITGNLPDGRAVNARNDSSGGEPTLEITISNNRKIKIRYGNTR"
     gene            complement(16802..17095)
                     /locus_tag="ACJJD2_000716"
                     /pseudo
     CDS             complement(16802..17095)
                     /locus_tag="ACJJD2_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(17165..17482)
                     /locus_tag="ACJJD2_000717"
     CDS             complement(17165..17482)
                     /locus_tag="ACJJD2_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579302.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(17479..17739)
                     /locus_tag="ACJJD2_000718"
     CDS             complement(17479..17739)
                     /locus_tag="ACJJD2_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HGG7579303.1"
                     /translation="MRPTTRDELRQALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPN
                     GEVIRTQRVPRTDGVQGKYPQRQDYEGNPLPNNHHHSGYFVK"
     gene            complement(17737..18081)
                     /locus_tag="ACJJD2_000719"
                     /pseudo
     CDS             complement(17737..18081)
                     /locus_tag="ACJJD2_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(18507..18851)
                     /locus_tag="ACJJD2_000720"
     CDS             complement(18507..18851)
                     /locus_tag="ACJJD2_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579304.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(18889..19233)
                     /locus_tag="ACJJD2_000721"
     CDS             complement(18889..19233)
                     /locus_tag="ACJJD2_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579305.1"
                     /translation="MFLDDVNVFLDDLNVFLDDLNTNPITDEWYMSNFADKHIKILES
                     YEAFDILKQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQ
                     EISQDILNEIFR"
     gene            complement(19236..19520)
                     /locus_tag="ACJJD2_000722"
     CDS             complement(19236..19520)
                     /locus_tag="ACJJD2_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579306.1"
                     /translation="MAGGNKSLKIGTQSVEKSTGRTIPNNLKEQLAMEEVKANPQGKT
                     PARIPPMSDTKNGWLAKDGWVKRVQNVNKIEIHYIENSRTGEKTDFKFKD"
     gene            complement(19494..19838)
                     /locus_tag="ACJJD2_000723"
                     /pseudo
     CDS             complement(19494..19838)
                     /locus_tag="ACJJD2_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(19922..20224)
                     /gene="imm40"
                     /locus_tag="ACJJD2_000724"
     CDS             complement(19922..20224)
                     /gene="imm40"
                     /locus_tag="ACJJD2_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm40 family immunity protein"
                     /protein_id="HGG7579307.1"
                     /translation="MLNEIFEIYSRQGESLIGIGIREAALPVPIAIDILNLFINERIL
                     VLGGDIYIKKDNYFYQTYDNWYYEGSNLFNSIDKAMHYLSQIKLENAYVSFVLKFI"
     gene            complement(20250..20516)
                     /locus_tag="ACJJD2_000725"
                     /pseudo
     CDS             complement(20250..20516)
                     /locus_tag="ACJJD2_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224185.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(20537..20743)
                     /locus_tag="ACJJD2_000726"
     CDS             complement(20537..20743)
                     /locus_tag="ACJJD2_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPCC family cysteine-rich protein"
                     /protein_id="HGG7579308.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(20709..21149)
                     /locus_tag="ACJJD2_000727"
     CDS             complement(20709..21149)
                     /locus_tag="ACJJD2_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB"
                     /protein_id="HGG7579309.1"
                     /translation="MAGGNKPPKPSTQQHPTHSDNNIGLPASYVKPDTSISPTGTIQD
                     RIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQTEHR
                     RVRYDINNNIYVLANPKTFKIKTMFKPNLGKKYYDGEFKKDMGN"
     gene            complement(21129..21458)
                     /locus_tag="ACJJD2_000728"
                     /pseudo
     CDS             complement(21129..21458)
                     /locus_tag="ACJJD2_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(21564..21935)
                     /locus_tag="ACJJD2_000729"
     CDS             complement(21564..21935)
                     /locus_tag="ACJJD2_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7579310.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(21932..22287)
                     /locus_tag="ACJJD2_000730"
                     /pseudo
     CDS             complement(21932..22287)
                     /locus_tag="ACJJD2_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(22315..22521)
                     /locus_tag="ACJJD2_000731"
     CDS             complement(22315..22521)
                     /locus_tag="ACJJD2_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579311.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(22531..>22878)
                     /locus_tag="ACJJD2_000732"
     CDS             complement(22531..>22878)
                     /locus_tag="ACJJD2_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579312.1"
                     /translation="NRPPKSITSNSKADASTQPSLQAQLIGEQISSGHAYNKHVIRQQ
                     EFTDLNINSPADFARHIENIVSHPTNMKELPRGRTAYWDDKTGTIVIRDKNSDDGGTA
                     FRPTSGKKYYDDL"
BASE COUNT         5518 a         5278 c         5627 g         6455 t
ORIGIN      
        1 tcgggcattc cttaaattac ccgtgtatcg ctgtaaatct tagagatggc ggaatatagc
       61 ggattaacaa aaaccggtac ggcgttgcct cgacttagct caaagagaac gattctctaa
      121 ggtgctcaag caccgagtga atcggttccg tactatttgt actgtctgcg gcttcgtcgc
      181 cttatcctga tttttgttaa ttcactatat cgattctgtt cccttgcagg cggacggcgg
      241 cggcggacgg tggaaaagca ggttttcaaa tgtccggttt ggcggcgcgc cgtctgaaaa
      301 ccgcttattt tcctttgctg tttccggcgg agtctttttt gtccgaaccg gagaagcggt
      361 cgaaacgtat ggtgtatgtc agctcgccgc ccgacgaacg gctaccgata cgggcaaccg
      421 cctgtatggc gcgggtcagc cggtaaatca gtttgacgga ctgttccgcg ctggagatgc
      481 tgtattcgta gccgatgtag agtttgccgg tcagttgttt gccgacggtc agcacctgtt
      541 cggcggggtt gagttcgccg gtttgcgcgt tgcggctgcg cttgctggta aagcccaaat
      601 catccaccag cccgatgcgg tcgttgattt gcccggcaag cagcgcgcca gcggctgcgg
      661 acagggcggc attgtcgccg ctgctgccac tgccggcgcg gttgaggatg agccaggaga
      721 gcttgtcttt ttcactcatc ggttcgtttg ccgtcagcgt aatgcgcgga ctgttgaggc
      781 tgcccaatat ttccacgccc gcaccgacgg gggaaaggcg gcgttcggcg cggatgttga
      841 ggttggggtc gttgagcggg ccgacaaagg agaccgtgcc tttggtaatg tccaaatcct
      901 gcccgtatgc cttataacgc cctttgatga cgcggaccgt gcccacgccc cgcacgcttc
      961 cgcccgattg ggcggtcagg gtcagtttgc cgcctatggt aacgtccgcg ccgtagccgg
     1021 cgaagcggat gccgtcattg aggtctaaag tcaggttcat attgacgggg agcggtgccg
     1081 ccgcctcttt tttgacttcg cctaatacga cgacatcgtc gccgacggac ggcatcgagg
     1141 atttttgcga accgaacagc ccctgatccg ttttaatcat cccggtaacg gatatgcctt
     1201 tttgcggcga atagcgcagg cgggtgttgc cggaaaccgt caggcggcgg ttggggcggg
     1261 acaggatgcg gtatttgtcg aacaccgcgc cgatatcgac atcgggtccg ctgttttcta
     1321 taccgaccgt accggagagt tccgccgtcc cttcgtgccg gaatttcagg ctgtcgatta
     1381 cccatttcct gcccgcgata tgcgaacgca gcgagccgtt gtccaagatg atgccttggg
     1441 tttggttgcg gtaatagagt ttgtcgccgt tgatgctgcc gcccaagtgc ggatcggcga
     1501 tgctgccgcc gagggttacg gcggcattca ggctgccttt gacggtttgt ccgacgggca
     1561 ggaagttgcg gaatacttcg gcatcggcaa cggtcaggtt gagtttcccg cccaggggcg
     1621 aggtactgaa agaattactt tgcccgacgg tgatgttgcc gttgattttc ccgtagttgc
     1681 tgctgacgtt gacggcggca ttgacggacg gagagccgac ccgtccgccg atttgcgcgg
     1741 cggcattcag gctgccggta atgttttgcg cggcggcggg cagaaagggc ttcaatgtgc
     1801 ccaagtcggg aagggaggcg gtaatcctgc cgccgagcgg tgcatttgcc atattgccgc
     1861 cgaaggcgtt gccgatgtcc aaatcggcgt taatccgccc gaaacgcgcg ccgccgtcaa
     1921 gcaggattcc gatacggtcg ttttgaaagc gcgttttcag ggaaaatgcg ttcaaaccca
     1981 aagcctgccc gccgggcaat acggcatcgc cgctttgccg gctgatattg aggtagccgc
     2041 gcgcgttgcg cccgtaggca acatcccagt cgccgtttaa aaccagattg tgttcgaagg
     2101 gcggtttgaa gaaattgtgc aactcggcga tatgcagacc gtgtgcgccg ccttttgccg
     2161 atatgccggt ttttttatcc caagaaaagt gttgcaggtt gaggctgccg cccattgcct
     2221 gccaatttgc cgcacttgcc gccacgcgtt ccgcaccggc ttcgagcgtc atacggtttt
     2281 gcagcttgag gttgaatgcg ccgccgatgt cgaggatgcc gatgctgcct ttccatcggg
     2341 taagttccct gttgatgccg cctgaagcgt ccaaatcgaa tttgaacggt ttgccatcca
     2401 gcgtcatggc ggcgtgtgtg cggatgcggt gctgcacgcc cgtgccgtcc agcatcaggt
     2461 cggcggtatc gacaaccgcc gctccgcccg acagcgaaag gcggctgcct ttgatgtcgg
     2521 cgcgtatcgg gcggcttgtg tcgggcgaac ctttgagcgt gaaatcgagc gaacggatgt
     2581 ctgccgcctt gccgatgtgc aggttgcgcg ccgcgccgga aaggtcggtt tcaaaggttc
     2641 ggatgccgcc gtccaaatca ccggaaaggt gtccgcgtac atttaaagac cccgcgagtc
     2701 cgaaaccgaa acgggataaa tcgggtgcgg tgatattgag gttaagccgg tcgccttttt
     2761 tgccgaagcc gccgtctgtt ttaataatgt tccgccccag ccgcaaatcg acggcggcac
     2821 gcggaaggtg gcgggactcg taaacaatgt cggcactgcc ggcaatcggt acgccgttga
     2881 acgtgccggg taaaaaccgc attttgcctg tgaatttctc ttttgccagt tcgccggcaa
     2941 ggtttattga gccgttgata ttgcctgccg gaagttgcgg atcgatgcgc gaagggtcga
     3001 atgcgcggga acggatgtcc agcttgagca ggcggtcttt aaacagctcg agatagcctt
     3061 gcgcggtcag gctgccttgc ccggcggcga tgttgacggt gtcgagcacc agtttccgct
     3121 gtccgtttgc ggggtcgctt gcaatggcga ggctgccgtc cgtgcgcgct gtgccgatgc
     3181 cgagttgcca agagattttg ggcgaggcgg tcgtgccacc gatgccgatg ctgccgtcca
     3241 acctgccttt gaacgcggtt tgcagcacgt cttccgcgcc gacggagttg atgcctatat
     3301 ttaaatcgag gatgtctttt tcggtgtcga ttttgcccga cagcctgatg ccgccccgtc
     3361 cgagcagggc ggcggacgta ttgccgatat gcaccgtgcc gtcctgccgg atgacaaagt
     3421 tgcctaaaac ctgacggacg gggatgccgt tgcggtcggc aaaaccggct ttagtgtttt
     3481 ccaaatcgag cgagccttcc agcgcgatgc cgtctgaaaa cgacgggatg gcggtcaggt
     3541 cgaaattcag cccggcatcg ggcagggaag gcacgaaggc ggacggattg atgttgaacc
     3601 ctttgaccag tacttcttcc aatgttttat ccaatgattc ggcaaacggg tggatgacgg
     3661 attttcccga gaggcggata ttgccgccgt cgatcgccag ttcggcgcgc acatccttca
     3721 ggctgccgct cagccgagcc gtactgtgta tggttttgcc ttcgagtccg cctttggtgt
     3781 aaatggcggt atcgagggca aacggttttt tcaagccgac cgaggctgac cccgacgaat
     3841 tgctccacgg cgtgtcggca gccttcaggt cgaggcggtg tcctttgatg tcataacggt
     3901 atgaagcatc cagccgttcg agatagacgg ttggtttgtc aaaggctttg cctgcgctga
     3961 ttttgcccgt ctcgaagcgg tcgagataga cggcggcagg caggtctatg ctgtcgggaa
     4021 ggctgagcgg agggcgttct tctttaggcg gagtcggttt ggtaacgatg gcgatgtcgc
     4081 cggcggaaat ttcggtgatg tgcaggctgc ggcgcatcag ttcggacggt ttccacgcga
     4141 agcggaagcg gctgatttta aggtctgccc cctcggtttc tatcgaccag ttgtcgccgt
     4201 cgaagccgtc gagcagcgtg cctttgaggt tttgggagga aatgtttacg ccgaaccaag
     4261 acgggatttg gtacagcccg aaacgcaaac cggattccgt accggcgagc cagctgagga
     4321 aacatactgc caaaatcagg acagacagca gtgccgccga cagcttcagc agcgggcggc
     4381 gtttttttgc cggcggggtg gggcggtgtt cagacggcat tttgcgcgtg ccgttttcgg
     4441 tcggatcggt atctgtcggt gcggtatcgg tcataatgtc tgtttcaaaa tggtttgctg
     4501 taatgccgtc tgaagcggcc gtatcggttt agaagcgtgt tcccaagctg atgtgccagc
     4561 ggattttctt atcgctgtgc ccgtaggcga tgtcgaagga aaacggcgca agcgggctga
     4621 accagcgcac gcccagtccc gaaccgtgtt tcagcttcat acgtttgaaa ttggcggcgg
     4681 catcgcccat atcgtggaat accgcgccgg aaagggtgcg cgtaaacggc agttggtatt
     4741 ccaggctgcc caccaagagg gcgcgttcgg gcaggaccga tccgttcggg ccggcaagtc
     4801 cgatgctgtc gagttcgtaa ccgcgcacgg aagacgcgcc accgctgcgg aacatcagcc
     4861 ccgaggggac atcggcattg tcgcgggcaa gggtgtaacc cgcttgtccg cgtatgatga
     4921 acgtgccgag tttcttgttt tcgggcgtga agaaataacc tgcgcgggca gaggtgcgga
     4981 tcagcgcggt ggaggacagg aatgtgccca aagtcgtacc gattttgccg tcgaggtaat
     5041 ggccgttttc gggatgcagc acgttgttga gcagctggcg tttccaagag gcggtcagca
     5101 tcgtggcgtg gctgttgccc aaatcgatat ccgagccggg aattttccgg ccttctgcga
     5161 gaaactctgc ccccagcctg gcatcgatgc ccgcgcggtc gcgcacatac cagatgccgc
     5221 cggagaaggc gcgtttttcg aggttttggg tggtcgaacg gttgtaggaa acgttgcttg
     5281 tccagtagtt gccccgatag ttgcgcggct ggctgatgcc ggcggcaagc gtggtttcgt
     5341 atttgtccat atcccagacg accgagccga tatagccttt gttgaagagg ttgtaatagt
     5401 cgtaggcgat tttgccgccc aaaccgtatt ccgaatcgag gcggatgccg gtttcgagct
     5461 tgtggcgttt gacctcggtt acgctgactt tgacggggac gcggtcgcct tggagacggt
     5521 cgaagtcggc ttgtacggac gcgccggaat aatgcccgtt ttgttcgagt gcctgttgga
     5581 agtcgagcag caggtcgagg tcgtagggcg tgcccggttg gaagcgcgcc aggccggaga
     5641 cgatttgttc ggggtaacgc tgtgtgccgg tgatttcaaa gtcgccgaag gcgatggggc
     5701 ggccgctgtc cacgacgacg ttcaaatcga cggtggcggt atcggggttg acggccgccc
     5761 gggtgttgcc gagcttggca agcgggtagc ctttgcgcgt taccgcgccg aggacggaag
     5821 ttttgctgtt ttcccaactg tcctgatcga aatcgctgcc taccggctgc tgccagtttt
     5881 ccagcgcgtt gcggtagtat tcggcgaggt tgccgtctga aaggatgtcg ccgaggatgg
     5941 cgacgccgac gttggcgatt ttggtgcgcg ggcccggtgt gatgtgcacc gtataagctc
     6001 cgtctttttc cgtcagactg actttgctgc tgaaatagcc tttgctgcgg agcatcgttt
     6061 taacgttgtc cggtgcttct tcggcgagga agcctgtctg ttccttatcc aaaacctctt
     6121 cctgctgctg cgtgataagc ggcaggtgtt cttcgaccat atctttgatt tcactgtcct
     6181 gcgtgtcgat gcggacgggg aatttgggtt ttaatttaac tgattcggtg tcagggcttt
     6241 tgtttttgaa caatgcgaaa cccgccgcct tgttttcgga aaggtcggcg gcaggcgcgt
     6301 atgcgtgcgg aaagaaaaat aaagccggca ggagcagggc ggtcggtttg atcatcatgg
     6361 tacgggtgtc gtgcatcggt gtggcggatt tcgattctaa cactgttcgg acggggcggg
     6421 acgcttcaga cggcatactg ccgccggtat ttcggaggtt gcggcccgcc ggaaatgtat
     6481 ctgcttgttt tagggtattt tgtttctaat ccgtatatgg aaaacaggct gcgtttcgga
     6541 atagtgccgg aaaataggca ggattaaata aatttatttt cgttcaataa attaaaccgt
     6601 tgcgccgaat gataaagcaa agcctgtccg gcactgcata gggcaaatca atgcaacctt
     6661 aaaacacagc cgaaaaataa aaaaaacaca gagaatgagt tttcttttaa aatacaacat
     6721 tttttaacat atcacaacat aaggaagaat tatggcgttc ggcaaatcct tatttcatgc
     6781 gatcggccgc gtcagcctgg tcaggcagat tgccgccggt ttggcgttgg gtatcgtaat
     6841 cggttcggtt tccccgcaac tgggcttggc ggcaggcttg ttcggcagcc tgtttgtcgg
     6901 cgcgctcaaa gcggtcgcgc cggttttggt atttattttg gtggcggcca caatcgcgca
     6961 gcaccaaaaa ggcaacaagg cgcatatcag gccgattatc gtcctttacc tcatcggtac
     7021 gttttccgca gccctgaccg ccgtcatcgc tggtatggtt ttcccgacgc acattgtttt
     7081 ggcgggcgcg ggcgatgtgt ccgccgcgcc gccttccggc attgtggaag tattgaaatc
     7141 gctgctgatg aacctggtcg ccaacccgat taacgcgatt gccaatgcca actatatcgg
     7201 cattttggct tgggctttgg ttttgggcgc ggcgttgcgg aatcacggtt cggacgttac
     7261 gcggcaggtc gttgccgatt tggcggaagc ggtttccacc gtcgtgaaat ggattatccg
     7321 ttttgcccct ttgggcattt tcgggctggt gtcgtccaca atcgcggaga cgggtttcgg
     7381 cgcgctggcg ggttatgcga agctgcttgc ggtactgttg ggctgtatgg cgtttatcgc
     7441 gctggtggtc aatcccgcca tcgtgtggtg gaaaatccgc cgcaaccctt atccgctggt
     7501 gtttacctgc ctgcgcgaaa gcggcgtgta tgccttcttt acccgttctt ccgccgccaa
     7561 tatccccgtg aatatggctt tggcgaaaaa actggggctg cacgaagaca cttattcgat
     7621 ttccatcccg ttgggggcga ccgtcaatat gggcggcgcg gcgattacga ttaccgtttt
     7681 ggctatggcg gcggcgcaca cccaaggcat acaggttgat tttgccaccg cgctgctgtt
     7741 gagcctggtg gcgacggtca gcgcgtgcgg cgcgtccggt gtggcaggcg gttcgctgct
     7801 gctgattccg ctggcgtgca gcctgttcgg catcagcaac gatgtcgcta tgcaggtggt
     7861 cgccgtcggc tttatcatcg gcgtgattca ggattcggcg gaaacggcgt tgaattcttc
     7921 aaccgacgtt ttgtttaccg ctgccgccga tttgggccga cagagaaacc gggcggaata
     7981 aaccaagcta tgccgtctga agcccgttcg gcgttcagac ggcatatttt tacaatttta
     8041 taggcatacg gcggaaacaa tgccggcttt gctttattga atacgaagga gatgatgatg
     8101 tttaaacgca gcgtaatcgc aatggcttgt atttttgccc tttcagcctg cgggggcggc
     8161 ggtggcggat cgcccgatgt caagtcggcg gacacgctgt caaaacctgc cgcccctgtt
     8221 gtttctgaaa aagagacaga ggcaaaggaa gatgcgccac aggcaggttc tcaaggacag
     8281 ggcgcgccat ccgcacaagg cggtcaagat atggcggcgg tttcggaaga aaatacaggc
     8341 aatggcggtg cggcagcaac ggacaaaccc aaaaatgaag acgagggggc gcaaaatgat
     8401 atgccgcaaa atgccgccga tacagatagt ttgacaccga atcacacccc ggcttcgaat
     8461 atgccggccg gaaatatgga aaaccaagca ccggatgccg gggaatcgga gcagccggca
     8521 aaccaaccgg atatggcaaa tacggcggac ggaatgcagg gtgacgatcc gtcggcaggc
     8581 ggggaaaatg ccggcaatac ggctgcccaa ggtacaaatc aagccgaaaa caatcaaacc
     8641 gccggttctc aaaatcctgc ctcttcaacc aatcctagcg ccacgaatag cggtggtgat
     8701 tttggaagga cgaacgtggg caattctgtt gtgattgacg ggccgtcgca aaatataacg
     8761 ttgacccact gtaaaggcga ttcttgtagt ggcaataatt tcttggatga agaagtacag
     8821 ctaaaatcag aatttgaaaa attaagtgat gcagacaaaa taagtaatta caagaaagat
     8881 gggaagaatg acgggaagaa tgataaattt gtcggtttgg ttgccgatag tgtgcagatg
     8941 aagggaatca atcaatatat tatcttttat aaacctaaac ccacttcatt tgcgcgattt
     9001 aggcgttctg cacggtcgag gcggtcgctt ccggccgaga tgccgctgat tcccgtcaat
     9061 caggcggata cgctgattgt cgatggggaa gcggtcagcc tgacggggca ttccggcaat
     9121 atcttcgcgc ccgaagggaa ttaccggtat ctgacttacg gggcggaaaa attgcccggc
     9181 ggatcgtatg ccctccgtgt tcaaggcgaa ccttcaaaag gcgaaatgct cgcgggcacg
     9241 gcagtgtaca acggcgaagt gctgcatttt catacggaaa acggccgtcc gtccccgtcc
     9301 agaggcaggt ttgccgcaaa agtcgatttc ggcagcaaat ctgtggacgg cattatcgac
     9361 agcggcgatg gtttgcatat gggtacgcaa aaattcaaag ccgccatcga tggaaacggc
     9421 tttaagggga cttggacgga aaatggcggc ggggatgttt ccggaaagtt ttacggcccg
     9481 gccggcgagg aagtggcggg aaaatacagc tatcgcccaa cagatgcgga aaagggcgga
     9541 ttcggcgtgt ttgccggcaa aaaagagcag gattgatgcc gatgccgcct gaagcggggg
     9601 cgttcagacg gcattgtgat gtttggggtg gggtccggtt caagtccgca tcagttgata
     9661 aacccgtcgt ctttcatttt cttttcggaa aaatactggc cgaataccag cagggcagcg
     9721 aggatgatga caaacagtcc cgccatagtc agagtgattt tgaaaaacaa ttccgctttg
     9781 agaaaagaaa accagagttg cacaatcagc agcagcaccc agccggcaaa cagtccgaga
     9841 caggcataaa cgccgagctt aaacacgatc ccgctccaaa atgacgacgt aggcctcgcg
     9901 tttgaaaaac agcagcatac ggcgcaaatc tttttccatc gttacgaccc gccagccttc
     9961 gggggatttg tttgttgagg aacgcgctga aattgacggg gttgaccttt gccgcgccga
    10021 aaaacaggct ggacaacagg ctttcctgat aaatgacgac tttgtattct ttcataggat
    10081 tccttttaac ataagggatc atcttttcag acgacccctt aagttgctaa tgatgcaaaa
    10141 cagcaaacct tattgcttat tgcccaactg cggcaatacc gagccttcgc ccaatgccaa
    10201 taaaccgctt tgcgagtaga tgcccagttt ggcgcgggtg tcggtgatgt cgaggttgcg
    10261 catagtcagt tgtccgatac ggtcgagcgg tgtgaacgct gcgtcttcga ctttttccat
    10321 actcaggcgt tcgggttggt aggtcaggtt gggcgattcg gtgttcagaa tcgagtagtc
    10381 gttgccgcga cgcaattcga gggttacttc gccggtaatg gctttggcga cccagcgttg
    10441 ggcggtttcg cgcaacatga gtgcttggct gtcgaaccag cggccttggt agagcaggcg
    10501 gccgaggcgc aggccgttga tgcggtattg ttcgatggtg tcctcgttgt ggatgccggt
    10561 aaccaagcgt tcgtaggcga tgtggaacaa tgccatgccc ggggcttcgt agatgccgcg
    10621 cgatttggct tcgatgatgc ggttttcgat ttggtcgctc atgcccaagc cgtggcggcc
    10681 gccgatgcgg ttggcttcga ggaagagttc gacgggatcg gcgtattctt tgccgttcag
    10741 tgcaaccggc acgccttctt caaagcgcac gctgacttct tcggggctga cttcgacgtt
    10801 ttcgtcccaa aaggcaacgc ccataatggg tttgacgatt ttgatgcccg agttcaaaaa
    10861 ttccaagtct ttggcttcgt gggtggcacc caacatattg gaatcggtgg agtaggcttt
    10921 ttccaccgac attttgtagt tgaagccgtt ggcaatcaga aattcgctca tttcgtgacg
    10981 gccgccgagt tcgtcgataa attgctgatc gagccagggt ttgtagattt tcagcgcggg
    11041 attggtgagc aaaccgtagc ggtagaaacg ctcgatgtcg ttgcctttgt aggtgctgcc
    11101 gtcgccccaa atattcacat cgtcttcttt catggcggaa acaagcatcg tgccggttac
    11161 ggcgcgaccc agaggcgtgg tgttgaaata ggcgatgccg ccggtggaaa cgtggaacgc
    11221 gccgcattgg atggcggcga tgccttcgtg tgccaactgc gcgcggcagt cgatcaggcg
    11281 ggcgttttcc gcaccgtatt ccattgcttt tttgggaatg gcattgtagt cgtcttcgtc
    11341 gggctggccg aggttggcgg tgtaggcgta aggcagtgcg cctttgagtt tcatccacaa
    11401 cagcgcggca gaggtatcaa gaccgccgga gaaagcgatg ccgacttttt gaccgacggg
    11461 gaggttttgt aaaatagtat ggttttggtt catgaaaaaa tcctcggtag cttgaaaaat
    11521 caaagccatt atcttataaa taggaaatat tgtcagccat catgccgtct gaacgggtat
    11581 tccgccgttt caggcggtat ttaaaaccga aaacattatg aacgcgttca acctcatcat
    11641 catcggcgac gaaatcttac acggcagccg ccaagacaag catttcgtct ttttcaaatc
    11701 cctgctcgaa tccaaagggc tgaagctcaa tcaggtgcaa tatctgcccg acgaacccga
    11761 tttgctggtc aggcaactgc gccgcagctt ttcagacggt ataccgacgt ttgttaccgg
    11821 cggcatcggt gctacgcccg acgaccacac gcgccaagcg gccgccgccg ctttggagtt
    11881 gcccgtcgtc cgccatcctg aagccgccaa gtttatcgaa ggcgtaaccc tgaaacgcgg
    11941 cgagccgctc gattcgcccg aacacgccca acgcctgaaa atggcagatt tccccgaagg
    12001 cgcggaattg gtgcccaatc cgtttaacaa catcgccgga ttttctatcc gcgagcatta
    12061 ttttttcccc ggcttccccg tgatggcgca cccgatggcg gaatgggttt tggatactta
    12121 ttacgtcggc cgcttcaacc aaaccaaacg cggcagccgc agcgtgtatg tgtttgagca
    12181 gcccgaatcg cgcattacgc cgcttatgga gcatatcgag caaacttatc ccggcgtgcg
    12241 ttcgtacagc ctgcccagcg tcggttggac gcattcagac ggcacgcagg tcaaaccgca
    12301 cattgagttc ggcatcaaag ccgaaggaga agccgtcaac cttttggacg cggcgtgggc
    12361 ggaagtgttg cacagcttgg acggattggg agcagagctg aaaaatcggg taaactgaaa
    12421 accgtttgcc caaatcggac gatatttaag gaaaaccatg caataccgaa tcagaagaga
    12481 aaacgaagca cccgaagcaa aaaatgcggg ggaaacctta tgggagcgcg acatcatgcg
    12541 cgaagtgctg ctgtccgcct atcgggacag gcgcagggag cggatgtgga aaaacatctg
    12601 gcgcaccgtc agcaccctga ttctggttgc cctgattgca ggcattttcc aaaaagacga
    12661 agccgcattg cagttggcgg gcaacacgcc gcataccgca gtcgtcaacc tgtacggcga
    12721 aatcggcaac ggtgtagaag accaggtcaa aaaactcaaa gacggtatgg aggccgccta
    12781 caaaaacccg caggcaaaag ccatcatcat ccgcgccaac agtccgggcg gctctcccgt
    12841 cgtatccaat actgcctttg aggaaatacg ccgtctgaaa gcgcaacatc ccggcatccc
    12901 cgtttatctc gtggcggaag atatgtgcgc gtccggctgc tactacatcg cggcggcggc
    12961 ggacaaaatc tatgccgacc cgtccagcat catcggcagc atcggcgtta tcggcagcag
    13021 tttcgacgcg accggcctga tggaaaaaat cggcgtgaaa cgcagggtta aaattgcagg
    13081 cagcaacaaa ggcatgggcg atccgttttc gcccgaaacg cccgaacagt cgaaaatctg
    13141 ggaagaaatg ctgaccggca tacacggcga gttcatcaaa gccgtcaaaa ccggacgcgg
    13201 cgaccgcctc aaattccgac aatatcccga cgtgttcagc ggtcgcgtgt acacaggcgc
    13261 ggatgcgctg aaagtcgggc tggtggacgg actcggcaat atttacagcg tggcgcgaga
    13321 cgtggtcaaa gcccccgatg tggtggatta cactccgaag gacgatttcg gcagaatctt
    13381 gggcagacgc ttcggcgcag aactcaaagc aagcgtgcgc gaagccctgc aggccgtccg
    13441 gtagcgttgt ttacagtatt tctaagggaa taccaaaata aaaatataca caaaaacact
    13501 cacctcccca gtatgctgcc actaagtcag ccgcgtcact atttaccgtg cacttaaagc
    13561 cgtaaaaggc aggttgtccc cgggaggttt tgtgcatcct gataccgatc ggttgttgtt
    13621 gctcaaagga cagaaggccg ctgataaacg agattacctg tttgtcgcta ttgacgattt
    13681 ttatactctg ccattttgcc ggacaaaacc gcagacagtg ctgccaagtt tctgaccgaa
    13741 catctgtccg acccctgctt gtacctgatt gagtacgttt actctgacaa tgataggtaa
    13801 tataaagagc cgtccaacat gctttcggtg cagcttgtta tgataatggg attggttgga
    13861 ggcttgcccg atttgcttgt ccgcagacca acggtaaggc ggagcgggtt atccgtacct
    13921 tgatggagat gtggcatgag gaacagtcgt ttgacagtcc ggaacatcgg caaaaggagt
    13981 tgtgctgctt tattaattta ggggctgccc tagatcacta gggaaattca aattaagtta
    14041 gaattatccc tatgagaaaa agtcgtctaa gccggtataa acaaaataaa ctcattttgt
    14101 tatcgtggct atgatgtatt ggatgcgggc gaatttagcc atttccgtat caatcacagc
    14161 acacattttg ccgaacgaca aaaccatatt aatggaactg agaacttttg gaatcaagca
    14221 aaacgtcatt tacgcaagtt taacggcatt cccaaagcgc attttgagct gtatttaaag
    14281 gagtgcgaat ggcgttttaa caacagtgaa ataaaagttc ttgttccatt ttaaaacaat
    14341 tagtaaaatc gagtttatcc tagttgtcca gggcagcctc atctctttat agatagctgc
    14401 ttaccaagta tccttaattg ctaattcaag ccaatcttca aaactattaa aaaattcatg
    14461 gttttctata ttatctaaat taatgacaat aaccctagaa tttcctgtta catcattacc
    14521 atcaaaataa gcttcccatt ctccattact agcgaatggg ataagattta aatcaggcag
    14581 gatagaattt ctaaatatat aagctacttc tgccccttct gttccataat tctcaaacca
    14641 ccagtgaaaa ttatgtggct gaatataagg tattaaagat gtatcgttag agatacgaac
    14701 atacttttca ggataacaaa acctttcagg aagcatatta ctaggatata aattaaattc
    14761 attttgaata atcatttcgt taccttagga tcataaatac taccattagg aaactgggta
    14821 gaccaatttg gtggtgctag ttcattttca atttgttttt taattctaaa ttgaatagct
    14881 tctccccatg tttgcggcat ctaatgctgc ttgctctgca tcaatattac taaaaattgg
    14941 attagtctca aaaatgaaaa attactgttt tttcattttt tatagcatat tcaagtacat
    15001 gaataatatt tttcactaag ggctctgtag aaaaatctga attttgtaat ttttctttta
    15061 cagccaaaat actttcctta tctattagcc aatccccctc acttggtcca aataaccaat
    15121 tatcggtaat ttcagaaaca agtctccata atccacgatt ttgatattca ataatttgat
    15181 tttccgtaat ttctacaact gtttcagatt gaatgttttt ataagcccaa tcaatcattt
    15241 cagtatattc actaattgaa acattgtctt ttaaacagaa aattaacagg ttgtgttcat
    15301 tcatttgtct aagttcctga tatgagtttg ttgttgtaaa taatcttttg cttgcttacc
    15361 ttgtaaatta aaggattaac cgcaccttgg atgatgccgc gaatatcatc catacggtta
    15421 ccccaccaat ttttattggt gtatcgttaa tcatttattt caaaaaagtt atttattatc
    15481 atattatcag ggagcaggtc gttaaaaaaa accccctcaa attccattaa attagtattt
    15541 atccagcaca taaacgaacc aaagcgttct ttccctgagt gtaaatattt aaaattaaac
    15601 tcaaaataag tttttttgct tagaaaattt aatggttttt ctatagtgaa aaaaaagccc
    15661 ttactcgttt tcgttcgaga tactatttta aataaatttt tattttcaat aaaataagaa
    15721 tattcattta ctaagttgtt atgataaaaa agtaatttta ttaaaatgtt ttcataattt
    15781 tctaggttca tttctagctc aatttaaaat gatttcattg ttgccgtacc aatgcgaaat
    15841 ttaccatcaa caaaatttcc cttcactgat acaggtacac catcaacttg ggtagtttta
    15901 ttttcaggct gcctgaaaga aagataggca acttattact catcttacgc tagccctcaa
    15961 taattgaata cgttgcacta gaaccaatta tttctatgaa tgtttgctca aacataaaaa
    16021 tatagtattt aaagaattct ctattcaaag gaaaataact ttctttcagt atccattccg
    16081 cataacactc atcaagaagt tcaaaaaaag attgaccacc attttcatga agcaaagctc
    16141 tatctgcatc ttccgaaatt aaatccataa aagtatctat aaaatacgat tcatcaacaa
    16201 ccctaaaatg aataacatct tcaataaaaa tttttatggt tttatccgta tttctataac
    16261 caactgctat aacttctact ttatcagagt ttattgctgc attatcaaaa tagaaatagc
    16321 cagttgggaa atctaagctt tttaatttca taatttatcg tgtatttcca tatctgattt
    16381 ttatttttcg gttattacta attgttattt caagtgttgg ttctccacca ctactatcat
    16441 tacgagcatt aaccgcacgc ccatcaggta aattgcccgt tatcgttcca ttaggacgtg
    16501 tttgtacatt tcgaacattc agactattaa aatcatttag tgcgtcattg taatccccca
    16561 ctttatcata ctgaacagcg ggaccttttg ttttactcct ttgagtagta ttgctcaaaa
    16621 tgtctttgat ttgtaaatca ctgcgcgcct taccggcttc tatgcgagct gccacactac
    16681 tcgggctata ggggtcgcta tcaatcgcag gattaccacc gctggttttt tgtccgctag
    16741 cctgtttccc aacctgctgt actgtatcgc caatttcatc taccgtacct aacgccttag
    16801 tctgcatatg gcgaacagca ggttttttat agccggtatt tttaacccaa tcccatttgg
    16861 tcgggttaag ttctactttt ttacctctcc aaaccgtacc tgcggcctct gctacggcaa
    16921 gggcagtttg ggctgttgct gttatattcg gatgggcatc agcccattgt ctggcggaat
    16981 tgatgccgtc ttttaccgca aaagcactgt cctgtaatat gctcgcggca gcaagttgtg
    17041 cttccgggct taattttcct gaattattaa taccttgtag agtctgctgc gcagagatgt
    17101 agcaactgta tttttacccc gtcgggtaaa aatacagttg ctacggctgc tgggaaagca
    17161 gttactattt tcccagtggc tcaaaattaa ttgtttcagc agatattttt ataataatcc
    17221 ctacatcaat aataatttca ctataaaatt ggtatttata tagctctatt tcgggtataa
    17281 acaagggaaa caagctatct tccttatcct cataatctac gaaattattt gtatctaatt
    17341 taaaattcaa aatattactg catttgatat atccgaaata attaccttca attgtatctg
    17401 taaaagataa tgtaagggta tttccattat cggaaaagat tatttcataa aggcttacat
    17461 tgtgaaaaat attttttttc atttgacaaa atatccagaa tgatgatgat tatttggcaa
    17521 tggattgcct tcataatctt gtcgttgcgg atattttccc tgtacaccat cggttcgcgg
    17581 cactctttgg gttcttataa cctctccatt tggacgaata tctattttca cgccatcagg
    17641 acctttccat gtttcatatt gagccgcatc tgaaccagta cgtctaaaac cttgttcttg
    17701 caatgcttga cgtaattcat ctcgcgtagt tggtctgata gatttaacaa ctggcttgtt
    17761 tcctcctgcc atctcaccgt ccaacgtctg catagggcgg gcagcaggtg ttttatagcc
    17821 gttattttta acccaatcct atttggtcgg gttaagttct acttttttac ctctccaaac
    17881 cgtacctgcg gcctctgcta cggcaagggc agtttgggct gttgcagtta tattcggatg
    17941 ggcatcagcc cattgtctgg cggaattgat accgtctttt accgcaaaag tactgtccta
    18001 taatgcgctt gcggcagcaa gttgtgcttt cggacttaaa tttcctaaat cattaatacc
    18061 ttgtaaagtt tgctgcgcag agatgtaggt cggatatttg tatccgacaa aaatatttga
    18121 cgcatctatc gtttccgaaa tgccgctgtt ggaaaatgtc ggattcgaga atccgaccta
    18181 cggctatttc gtttaagtca taaatagcca ttcatgttcc ttctgaattt gcttttgcta
    18241 tccttagaac caatcatata aacattatca tcattaatta atgttctaag tttatgaagc
    18301 ggtcaaatct gtcaaactac cagagatgaa gcatatcctc ctggaagtaa ttctgttcgt
    18361 gctgtttcca tatcttcttt gccatcatca gttacttctc tgtctaaata aaatcttacg
    18421 ataagttttt gtctaatttc atcaaattct gccgtaatta atcttatatt gatatgaata
    18481 cacggttcat acctgctatt agccagtcag gtgtagttgg atggggattc atttttaata
    18541 atatcttcaa gcaagtgaaa tgtaagaaaa gcgtagatac ttgaaggccg gctatctgat
    18601 tggcaaaaag aaatttcgga gataaagaat ttccgtttat atttttcata aattaaatca
    18661 acaccttgtt ttacataaaa actaacttcc tcaggaagga tatttataac attctctcct
    18721 tttactttta tagttaatgg tttgattttt atgttttcat gaatatctga taggattatt
    18781 tctaaaaaat tatttttatt tccagtcatt ctggctattt tatgtatatt tccattgtgt
    18841 tcgattatca ttttattttt tccaaggatt tccttctata ttgatagttt atctaaagat
    18901 ttcatttaaa atatcctgac taatttcttg tttatataat tctacaattt tctgtttctg
    18961 tgtatttgta taaaattttt cgttggtatc tgcttgatat tttaattgtc tcaatatttc
    19021 catgatttca tattctgatt tttcatcata ttcttcaatc atgtaatcaa caaattgttt
    19081 tagaatatca aaggcttcgt aactttccaa aattttaata tgtttatcgg caaaattgga
    19141 catataccat tcgtcagtga ttggattagt atttaaatca tctaaaaaaa catttaaatc
    19201 atctaaaaaa acatttacat catctaaaaa catgactaat ccttaaactt aaaatctgtt
    19261 ttctcaccgg ttcttgagtt ttcaatgtaa tgtatttcaa ttttgtttac gttttgaaca
    19321 cgcttaaccc aaccgtcttt tgctaaccaa ccatttttag tatcggacat aggaggtatt
    19381 ctcgcaggag ttttgccctg tgggtttgcc ttaacttctt ccattgctaa ttgttccttt
    19441 aaattattag gtattgtacg accggttgat ttttcaacag attgtgtccc tatttttaat
    19501 gatttgtttc ccccagccat ttccccgtct acagtctgca tagggcgggc agcaggtttt
    19561 ttatagccgg tatttttaac ccaatcccat ttagtcgggt taagttctac ttttttaccg
    19621 cgccaaaccg tacctgcggc ctctgctacg gaaagggcag tttgggctgt tgcagttata
    19681 ttcggatggg catcagccca ttgtctggcg gaattaatgc cgttttttac cgcaaaagca
    19741 ctgtcctgta ataggctcgc ggcagcaagt tgtgcttccg gacttaaatt tcctaaatca
    19801 ttaatacctt gtagagtctg ctgagcggct gtatctgagc cggtcagtgt aggttggatt
    19861 aaaacccagc attttcaaca tcttgatgtt ttactataaa tctattcttg tgcttccttt
    19921 gttagataaa tttcaacaca aaagatacgt atgcattctc taattttatt tgagataaat
    19981 aatgcattgc tttgtcgata ctgttaaata aattacttcc ctcgtaatac caattatcat
    20041 atgtttgata aaaataatta tctttcttga tataaatatc tccccccaat acaagtattc
    20101 tctcattgat aaataaattt aatatatcta ttgcaatagg gacgggtaat gcggcttctc
    20161 taattccaat tcctatcaaa gattcccctt gtctcgaata aatttcaaaa atttcattta
    20221 acatgttaat ctctatctac tatttttcaa tcggtataaa ccctattcac agtttcatct
    20281 tgtatttctt tatgaatact taatatatta agatagctta ggaattttat tttctcagat
    20341 tgaggcaact catcaaaacc aagccaacaa taaaaattgt tatatgattt taaaaaatca
    20401 acaattttta tttttcctaa aaccaaatct tcgactaact gggttgcata aataatatca
    20461 tttatgattt taacaggtaa attatttgat aggtaaccat gggattccgt catcattgat
    20521 ttctctaggt gcttatttat ctgattggta agccttttgc gtaagcttct ttcgcctccg
    20581 caagtgtcat ttcattaggg ccaccatcta tattagtttc tcctgtattt tgccactgac
    20641 aaacgtcaca gatatcatag tccataactt cagttccgca aacaggacaa tgtagccata
    20701 tttctccgtc aatttcccat gtcttttttg aattctccat cataatactt ctttcctaag
    20761 tttggtttaa acattgtttt gattttgaat gtttttggat tggccaaaac atagatattg
    20821 ttattgatat catagcgcac tcgtctatgt tccgtctgat aacctaatat cttgtccgat
    20881 gtctgttttg ataacaaatc agacgccatt ttttggtagt cttcaatggt tatatcgcca
    20941 aattcttttc catgagcttt gaaatgtcca tttaaagatt tctcagtagg aaacttggac
    21001 tttgtccatc tgatgcggtc ttgaattgtt cctgtcggag aaatagatgt atcaggttta
    21061 acatatgagg caggtaagcc gatattgtta tcagagtgtg tagggtgttg ctgcgtactt
    21121 ggttttggtg gcttattccc acctgccatc tccccatcta aagtctgcat agggcgggca
    21181 gcaggtgttt tatagccggt atttttaacc caatcccatt tggtcgggtt aaggtttact
    21241 tttttaccgc cccaaaccgt agttgcggct tctgctacgg aaagggcagt ttgggctgtt
    21301 gcagttatat tcggatgggc atcagcccat tgtctggcgg aattaatgcc gtcttttacc
    21361 gcaaaagcac tgtcctgtaa taggctcgcg gcagcaagtt gtgcttccgg acttaaattt
    21421 cctaattcat taatatcttg taaagtttgc tgcgcagaga tgtaggtcgg atatttgtat
    21481 ccgacaaaaa tatttgacgc gtctatcgtt tccgaaatgc cgctgttgaa aaacgtcgga
    21541 ttcgagaatc cgacctacgg ctgctaccaa ccatcatttt cagcttcttt tagccaagta
    21601 tcaaaatttt caaaagtctc gtaatatttt gtattatcta aattaactac tataatttta
    21661 ggattacctg atttatctga aatatcaaaa caggcagccc actcttggtt tctagcaaaa
    21721 ggtaataggt ttggaatgcc agttatttca aaataaatgt caattacttc tgatatattg
    21781 ctttctgcat tttcaaacca ccaaggaaaa gaatattgtt catcgtagtt aatggcatga
    21841 gtggattgag ctaattttaa ataactttgc ggatatttaa atcctttagg aagcattgct
    21901 tcaggatacg gaacaaaact attttgtttt atcatttcct aagtaccttt acatcataaa
    21961 tacttccgtt aggaaatctt ttgctccacc cttctggaac tcctttttgt gtttcttgct
    22021 ttctaattcg tagctggata gcttctcccc aagtttgagg ctcaatacca tcatgcttaa
    22081 acctgattct ctcttttgat gataatcggt cattaaaatt atgaacattc gcttccactt
    22141 ttacccctgc ttcacgtgct gccataatac gcgtgttatc catactagta ggtgctccat
    22201 caggcatatt aacaacatca accctgtcgc caacccatga tttttttctt tcatttcggc
    22261 tacaatagaa tcatagttgt aatttgcact aggctctgac aaaaatttgg gttgttaagt
    22321 tgtcattttt ttataaattc cagcaaactg ttgttgtaaa ttatctactt catgttttct
    22381 aacaccagat acattttcaa attctcttga atctacacat acgcccgcat atatctcatt
    22441 caagatagct cgtaaaacaa aaacttcatc ttgagttagt gaaatagttg agttttgatt
    22501 atttatggat agtatattca tggctttttc ctataaatca tcataatatt ttttacctga
    22561 tgttggtcta aatgctgtac ctccatcgtc agaattttta tctcggataa ctattgtccc
    22621 tgttttatca tcccaatacg cagttctacc gcgaggtaac tctttcatat ttgttggatg
    22681 gctaacaata ttttcaatat gccgagcaaa atctgctggt gaattgatat ttaaatccgt
    22741 aaattcttgt tgtcttatga catgcttgtt ataagcatgc ccactactaa tttgttctcc
    22801 aattagttgc gcttgtaaag acggttgtgt ggaagcatct gctttgctgt tggacgttat
    22861 agatttaggc ggtctatt
//
LOCUS       DBBZXW010000020        21670 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.020, whole genome shotgun sequence.
ACCESSION   DBBZXW010000020 DBBZXW010000000
VERSION     DBBZXW010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21670
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.020"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(293..984)
                     /locus_tag="ACJJD2_000733"
                     /pseudo
     CDS             complement(293..984)
                     /locus_tag="ACJJD2_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(1243..2058)
                     /locus_tag="ACJJD2_000734"
     CDS             complement(1243..2058)
                     /locus_tag="ACJJD2_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579313.1"
                     /translation="MASIALYRLSFPVAAGGSGSRCTLCTKVHRESMLAIYSINILIY
                     NEKMFFRVTLYFVKNFVSFSKTRKSNEMMQKHKCLIDFILTVASQIAYADLPLSLEEL
                     LTDKGKFKLESSISYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQV
                     FDSQNVKAIQLSQAEMKETQGEFVPIIAAAAFGGALGTWGYHGANLYNHGKLGTAQGA
                     ATAAGIGAATGVAATGLAAAAGGGLAGNLAWRPGIHALGFGANAANNAVNSRK"
     gene            complement(2089..2247)
                     /locus_tag="ACJJD2_000735"
     CDS             complement(2089..2247)
                     /locus_tag="ACJJD2_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579314.1"
                     /translation="MKTPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2244..3086)
                     /locus_tag="ACJJD2_000736"
     CDS             complement(2244..3086)
                     /locus_tag="ACJJD2_000736"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7579315.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPTDERVLLAQAIEEKHAAEKAQEQTVSGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3322..4242
                     /gene="pyrB"
                     /locus_tag="ACJJD2_000737"
     CDS             3322..4242
                     /gene="pyrB"
                     /locus_tag="ACJJD2_000737"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HGG7579316.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLAHAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4252..4710
                     /gene="pyrI"
                     /locus_tag="ACJJD2_000738"
     CDS             4252..4710
                     /gene="pyrI"
                     /locus_tag="ACJJD2_000738"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HGG7579317.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4775..5440
                     /locus_tag="ACJJD2_000739"
     CDS             4775..5440
                     /locus_tag="ACJJD2_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579318.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5503..6720)
                     /locus_tag="ACJJD2_000740"
     CDS             complement(5503..6720)
                     /locus_tag="ACJJD2_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7579319.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWSRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAGE
                     RLKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            6904..7407
                     /gene="def"
                     /locus_tag="ACJJD2_000741"
     CDS             6904..7407
                     /gene="def"
                     /locus_tag="ACJJD2_000741"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HGG7579320.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLIADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            7494..8420
                     /gene="fmt"
                     /locus_tag="ACJJD2_000742"
     CDS             7494..8420
                     /gene="fmt"
                     /locus_tag="ACJJD2_000742"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HGG7579321.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8499..9758
                     /gene="rsmB"
                     /locus_tag="ACJJD2_000743"
     CDS             8499..9758
                     /gene="rsmB"
                     /locus_tag="ACJJD2_000743"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HGG7579322.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLMAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIGNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLVASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASTACADAQDLSAWYDGKPFDAVLADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQVLKSGGRMLIATCSVFVEENDGQLQKFLNRHA
                     DAELIESRVLLPNKHQDGFYYALIQKH"
     gene            9724..10323
                     /locus_tag="ACJJD2_000744"
     CDS             9724..10323
                     /locus_tag="ACJJD2_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HGG7579323.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10323..12443
                     /locus_tag="ACJJD2_000745"
     CDS             10323..12443
                     /locus_tag="ACJJD2_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7579324.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAE
                     QILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATILPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEVGRDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVKTYA"
     gene            12436..13713
                     /locus_tag="ACJJD2_000746"
     CDS             12436..13713
                     /locus_tag="ACJJD2_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HGG7579325.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEVGSPFETVARYFHKNGTPWVSPARVEYLIDMPTELLQKAEGGVLYVGDIAQYSR
                     NIQTGIAFIIGKAERCRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAGAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13804..14991
                     /gene="dprA"
                     /locus_tag="ACJJD2_000747"
     CDS             13804..14991
                     /gene="dprA"
                     /locus_tag="ACJJD2_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HGG7579326.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRASARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGSRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            15017..15478
                     /locus_tag="ACJJD2_000748"
     CDS             15017..15478
                     /locus_tag="ACJJD2_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HGG7579327.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15550..17856
                     /gene="topA"
                     /locus_tag="ACJJD2_000749"
     CDS             15550..17856
                     /gene="topA"
                     /locus_tag="ACJJD2_000749"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HGG7579328.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAETCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17934..18203)
                     /locus_tag="ACJJD2_000750"
     CDS             complement(17934..18203)
                     /locus_tag="ACJJD2_000750"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HGG7579329.1"
                     /translation="MIASSEPFPCSACGLCCQKVNLSEQTIYLDRGDGTCRHFDDSTR
                     LCTIYETRPLVCRVEDYYHHYLSEQMSWQDFIQINIEVCKQFQSE"
     gene            complement(18200..18619)
                     /locus_tag="ACJJD2_000751"
     CDS             complement(18200..18619)
                     /locus_tag="ACJJD2_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579330.1"
                     /translation="MGKIQILNKLPTKNPATIPFDAASNSFFRILEARNEYKKIAAQE
                     KTKREVIGAWRDVRLAELKNQQEILRLYLENTFKERRKMIDGLFEALDKGMEAGNIHV
                     IDTAINGIVSIAKDSPLKQVDNLIAALKNDNVKVIDF"
     gene            complement(18619..19566)
                     /locus_tag="ACJJD2_000752"
     CDS             complement(18619..19566)
                     /locus_tag="ACJJD2_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579331.1"
                     /translation="MAIPVLLWGAAAALAATGIVKGAAALSDIDDAKEIGERAERRYK
                     RRKRELNSTKDETNLAFEELGQFKVDIFNNQIRHIVQVLNNTSNKHAKSELSGFNSTF
                     DIAELKEMETMVQTSLELSTNLGSSAITGALAGFGVYGAVPMIATASTGTAISTLSGA
                     AATNATLAWLGGGSLAAGGFGMAGGMVALGGIVAGPALAIGGFMLASKAEEALTEARA
                     YSAEIDEAIDEMDLITEGLEGLKENAREIRHTLEEMVKRFEKVRVDHADHPDFHTMLV
                     IGKAIKNLLNTPIMEEDGSPVANIRHQCEGCLNIELGTV"
     gene            19723..20100
                     /locus_tag="ACJJD2_000753"
     CDS             19723..20100
                     /locus_tag="ACJJD2_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiprotein-bridging factor 1 family protein"
                     /protein_id="HGG7579332.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            20189..20758
                     /gene="rsmD"
                     /locus_tag="ACJJD2_000754"
     CDS             20189..20758
                     /gene="rsmD"
                     /locus_tag="ACJJD2_000754"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HGG7579333.1"
                     /translation="MAAGKHTKHSNQVRIIGGQCRGRKLSFASANGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGRL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20881..21132
                     /locus_tag="ACJJD2_000755"
     CDS             20881..21132
                     /locus_tag="ACJJD2_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HGG7579334.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            21229..21312
                     /locus_tag="ACJJD2_000756"
     tRNA            21229..21312
                     /locus_tag="ACJJD2_000756"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21263..21265,aa:Tyr,seq:gta)
     gene            21343..21416
                     /locus_tag="ACJJD2_000757"
     tRNA            21343..21416
                     /locus_tag="ACJJD2_000757"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21375..21377,aa:Gly,seq:tcc)
     gene            21426..21500
                     /locus_tag="ACJJD2_000758"
     tRNA            21426..21500
                     /locus_tag="ACJJD2_000758"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21458..21460,aa:Thr,seq:ggt)
     gene            21549..>21670
                     /locus_tag="ACJJD2_000759"
     CDS             21549..>21670
                     /locus_tag="ACJJD2_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG7579335.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFG"
BASE COUNT         5387 a         5530 c         5877 g         4876 t
ORIGIN      
        1 gggggtgcgg tcaaggcggg cggatagggc gcatttttca gcgggtgcgt cgagaagcag
       61 ccgatgtgtt tggcagccgc agcttggggg ggtgtagtgc taatggcggt ttctttgctt
      121 ttatagtgga ttaacaaaaa ccagtacggc gttgcctcgc cttagctcaa agagaacgat
      181 tctctaaggt gctgaagcac taagtgaatg ggtttcgtac tatttgtact gtctgcggct
      241 tcgtcgcctt gtcctgatta ctatataaaa taaatgggca aaaatcggtt tattatcgtt
      301 tttgccgcat ttggatttgt tctaccgtaa aacgtgtttg acgaacggga ttcttattaa
      361 aaaacatctg atttctaaca aaatcagtat tttttggcac gatggctaaa atttttcctt
      421 ccatttcgcc atcacgtgtt ttccatgcgc tcaagaattg tgatttgctc attgagacgt
      481 gccccagcga tggatcagcc agcaaaacag tttctccgtt aataccgttc aataccgaaa
      541 aatggttgtt tttacggtat tttaaataca caattacagg aatttttagt tgtaccaact
      601 gttcaaatgg caaagcataa ccttgtgctt caaaacccag ttcgggcatt atgcgttgca
      661 tatcatcaaa agaagcacgc atttgggttt tatccatttt gtctaagatt tccgcttcag
      721 aataatgtct gccataaaaa ttattcagta acgtggcaat cgaagccgcg ccgcaagaaa
      781 aatccaaatc ttgttttact atgccggaat ctcgccgtgc tttccaactt cgtacatgga
      841 tgttttggta agaagcgggg ggtcaacaaa cataggccaa gcaaaaacta tatttggggc
      901 gaaaccaatc aaagccgcat aatttatcaa tttataaaga ttttttatca taatatgtat
      961 acgcggaata aacgcatgaa acataaaaaa ataaaatcat atgcaatttt attgcatgaa
     1021 taaatatgaa taaaatagat aatgatggga gtaaatacgc catgtatttt ggaagtttaa
     1081 atttattaat aataaaataa tttatcgtag cgcaaataaa tcccaaaatt ggaacgatta
     1141 gaaaaaaaat taatacaccc atcatcatgc aaactctata ttaagaaata gctaactaat
     1201 gctattgtgg aaattagtta gctaactaaa agttattaat gattattttc gagaattgac
     1261 tgcattatta gcagcattgg caccaaaacc tagtgcatga atacccggtc tccatgccaa
     1321 attcccagcc aatccgcctc cggcagcagc agccagccct gttgccgcta ctcctgttgc
     1381 cgcaccgatt cctgccgcag tagccgcgcc ttgcgcagtt cctaatttac catgattata
     1441 caaattagca ccatgatacc cccatgtacc taatgcaccg ccaaaagcag cggctgcaat
     1501 aatgggaaca aattcacctt gtgtttcttt catttcagcc tgtgataatt gaattgcttt
     1561 cacattttgg ctgtcaaaaa cttggctgtc taaattttgc gccattacag gtgtaatcat
     1621 catagccatt acagttgcaa ttttcgttgc gctggtttgc acataaatag gattagcaaa
     1681 ttcgctttga ttgcgttcag tgttgatgta gctaatactg ctttctagtt tgaatttacc
     1741 cttgtcagtc aataattctt ccaaacttaa aggtaagtca gcataagcaa tttggctggc
     1801 aacagtcaaa ataaaatcta ttagacattt gtgtttttgc atcatttcgt ttgattttct
     1861 agtttttgag aatgatacaa agttttttac aaagtaaaga gtcactctga aaaacatttt
     1921 ttcattataa atcaaaatat tgatagaata aatagcgagc atcgattcac ggtgtacttt
     1981 agtgcaaagc gtacaacgcg agcctgaacc accagccgca acaggaaaag aaagccgata
     2041 gagtgcaatg cttgccaacg tgcaagcgag cttgcaagaa cgcttggctc aacgagagca
     2101 ggcaagacag aaagcagaaa gcaggatagg agcggtaacg caaaggtctc gggctttgat
     2161 ttcgccgtaa accctgctgc cgccttgtcc ggaaagggtg caggcggcga gtgccgacag
     2221 ggtgcagatg gggagggggg ttttcatttg gggtcgcaac ggaagtggta tgcgcagatt
     2281 tcaaaaccgt ttttgaaata caggcggtgc gcgtcggcac ggtcgtggtt gacgtggacg
     2341 ttgaggtgga ttttggttac ccctgtttcc gcgccgattt tgcggacttc ttccaaaagg
     2401 cgcgaggcgt agcctttgcg gcggctttgc ggcagggtaa cgatgtcatc gatgtggatg
     2461 tggcggccgc cggcgagggt gcaggcttcg cggaagccgc agacggcgac ggcgttgtgt
     2521 ttgccttctt caaaaatgcc cagcaggcgg tagccttggg ggcgttggac tttgttgatc
     2581 tgttcggtaa agcggttgat gtcggtcagg gcggaacgca aaacgctcaa ggctgcaaag
     2641 gcggtggcgg tgtcgtccgc gccgatttcg cgcaaaacgt aggatgcgcc cgagacggtc
     2701 tgttcctgtg ctttctcggc ggcgtgtttt tcttcgattg cctgtgccag caggacgcgc
     2761 tcgtcggtag ggtcgttttg tccgccctgt tcgcgttctt cgagcagggc tttgcagtcg
     2821 atgacgcgca ggtcgttgtc ggcggcaaag tccatcagga agcggaacat ctgggggttg
     2881 tcggtttcca gttttttatc gacggcgacg cagcggatgt tgtccaccag catggggcgc
     2941 acccatttcg agtaggaaag cctgttgtct ttggtaaacg aggacagaat gccgcacagg
     3001 cgttccgccc agtcgctggg acggaaaatc ttgccggaac tcgttgtgcc gtggatgacg
     3061 acttcgtagg ggttgcagac taacatggcg gcttcctgaa aagaaatgtc tggcgcgatt
     3121 atacctgatg cttatgcggg cgtgtttgga tatgccgtct gaaaagtacg ggattcgtgc
     3181 ggtaaaactt tgcggcggca aatgtgcgat aatacgcgcc gtattgccgc ttttgcgaag
     3241 ctgttccgca aacactcggg cggcgtggac gtataaccgg atgcccgcct gacgcgggtt
     3301 ttttacggaa ggggggcaaa aatgcctaat ccgctttaca gacagcacat catctccatt
     3361 tcggatttgt cgcgcgaaca gttggaatgc ctgcttcaga cggcattgaa gctgaaggcg
     3421 catccgcgcg gcgatttgtt ggaaggcaaa cttatcggtt cgtgcttttt cgagccgtcc
     3481 acgcgcacga ggctgtcgtt tgaaacggcg gtgcagcggc tgggcggcaa ggtcatcggc
     3541 ttttcggacg gcgcgaatac cagtgccaaa aaaggcgaga cgcttgccga taccgcccgc
     3601 atcatttccg gctacaccga cgcaatcatc caacgccacc ccaaagacgg cgcggcgcgc
     3661 gtggcggcgg agttttcgcg cgtccccgtc atcaacgccg gcgacggcac gaaccagcat
     3721 cccagccaga ctttgttgga tctggtaacg atttatgaaa cgcaggggcg tttggacaag
     3781 ctcaaaatcg ccatggcggg cgacttgaaa tacgggcgca ccgtgcattc gctttgtcag
     3841 gcgttgaaac gctggggctg cgaatttgcc tttgtttcgc cgcccagcct cgcgatgccc
     3901 gactacatta ccgaagagtt ggacgaagcc ggctgccgat accgtatcct cggcagtttg
     3961 gaagaggcgg cggaatgggc ggacatcctg tatatgaccc gcgtccagcg cgaacgtttc
     4021 gatgaacagg aatttgccaa aatccaaggc aaattcaacc tcgaagcgtc tatgctcgcc
     4081 cacgccaaac cgaacctgcg cgtgctgcac cctttgccgc gcgtggacga aatccatccc
     4141 gatgtcgatg ccacgccgca tgcctattat ttcgagcagg caaccaacgg cgtttatgcg
     4201 cgtatggcga tattgtcgct ggtgttgaac gaagaagtgt gaggaaccga tatggaaacc
     4261 ccgaaactca gtgtcgaagc cattgaaaaa ggtacggtta tcgaccatat tcccgctggc
     4321 agggggctga ccatcctgcg ccagttcaaa cttttgcact acggcaacgc agtaaccgtg
     4381 ggcttcaacc tgcccagcaa aacccaaggc agcaaagaca tcatcaaaat caaaggcgtg
     4441 tgcttggacg acaaagccgc cgaccgcctt gccctgtttg cacccgaagc agtggtcaac
     4501 accatcgaca atttcaaggt tgtgcagaaa cggcatttga acctgcccga cgaaatcgcc
     4561 gaagtgttcc gctgtccgaa cacgaattgc gccggccacg gcgagccggt caaaagccgg
     4621 ttttatgtta aaaaacacaa cgggcagacg cggctgaaat gccattactg cgaaaaaacc
     4681 tacagccggg attcggtggc ggaagcctga cggattccct taaaccgagc gggcggcatt
     4741 tcgtctgccg cttgttttgc caatctgaaa tggaatgatg atgcacgctt ctgtccaaag
     4801 ccgtttcgca ccgatacttt atgttttgat tttctttgcc ggttttttga ccgcgcaaat
     4861 ctggttcaat cagaaagcct atactgaaga gctgcctccg cttctgtccg cattgtccgc
     4921 tgtcgcgctg gtgtggctgg cgtgggcgtt cgtgtcggcg cgttcaaagg ctaaggcgga
     4981 aaagttctac cgcgaaaaaa tgatacagaa cgaaagcata caccccgtcc tgcacgcttc
     5041 tttgcaacac ttggaacaca agccgcaaat gctcgccctg ctggtcaaaa accacggcaa
     5101 agggatggcg gaacaggtca ggttcaaggc ggaagtgctg cccgacgacg aagacgcgcg
     5161 cacgattgcc gccgagttgg caaaaatgga tatgtttgca ttggggacgg acgcggtcgc
     5221 ctcgggcgaa acctatggac gcgtgttcgc cgatattttc gagttgtcgg cggctttgga
     5281 agggcgcgcg ttcaaaggaa tgttgaaact gacggcggaa tataaaaaca tcttcggcga
     5341 tgcctgccgt tcggaaacgg cgttggagtt gggcgcgctc aatcaggcgt tgcaggagat
     5401 ttcaaaaaca tcggaaaagt ccaaacggat attttattga agatggaaaa atgccgtctg
     5461 aaacggaagg tgtttcagac ggcatttttg tcggatgatt aattattcgg agcggttgaa
     5521 gccaaacttc acgcggctgc ggccctgatc cggtatattg tccaaatcgc gtcccggatt
     5581 ggcggcggtg tcgcctacgg aaatatcgga gatgttttcc aaaatgatgg cggacgacag
     5641 gtgttcggag gtgcggtaaa ccattgccaa gcccacttct tcggcaggag tggaaatcag
     5701 ctcgacggta tccctgcttt tgaaattgtt ggagaggtcg acctgcatcg ttttcttgcg
     5761 tttgtagagg ctcaaaaccg tgcctttgtc caaaccgtcc gcctcgcctt tgtcgatggt
     5821 gatggtttga aactggccgg caatccttgt gccttcaaac acggaaacga ttttagcctg
     5881 aaccgggcgg gacggttcgt gcggcatcat gttgaagcgg tcggtgtctt ccggcatttt
     5941 catcaggtag tcgccctgct gtatttcgga aatggcggtt tcgaccacca gcggctgtat
     6001 cgaaggggtg cgcagcgggg taatcaaagg atgggtgcgg gtatggtatt cgttgtcttt
     6061 cagccgttct ccagcctgtt tcgagcgttg ttcgagggcg gagtcggtat agtcgaggga
     6121 gcgcacgatg ccgctgaatg cgacttcctg cccgaggaat ttacccgtat ccggatcggt
     6181 gatgttttta ttgattcggt aggtcaggta gcggcccggc tctttcaggc ctttggtgta
     6241 aaccctggtg cctttggtgt acagcagcct gccttccggg cccgagagca ggcgcggcgc
     6301 ggcagcggtt tctttgcggg aaacgatttg cggatgccgc ataaagatgc ggtagaagtt
     6361 gacatcgatg gcgggaatac cgtatccgga cacttcctta tccggactca ttttgacgac
     6421 ggggatgccg tctgtctgtt ccaagccgag gcgcggttcg ccgtcaacgt ggcgcaacac
     6481 caatacctgg tccggataaa tcaggtcggg attgtggatt tgatcccggt tcgcgtccca
     6541 caggcggctc cattgccacg ggctgtacag gtatttgccc gaaatgcccc acagggtgtc
     6601 gccctgtttg accgtgtagc gttccggcgc gttcgggcgc acctccaaat ttgccgccaa
     6661 agtttgtgtt gagaatgcca tacctgccgc gcagagcagg gttataatac gacgttgcat
     6721 aaccgttccc cttatctgat aaatttcggt ttgtcttgct tgattgggtt ggaaaaagcg
     6781 gcggcagccc ctcgggatgt gccgcgtgat aaaaaatgtt ccgcatttta acatcgaatt
     6841 atccgcacca tcacggtaat tatgaaaaac aggcggcgta tccgccgaag gaaagagaaa
     6901 attatggctt tattgaatat cttgcaatat cccgacgagc gtctgcacac ggtggcaaag
     6961 cctgtcgaac aagtcgacga gcgcatccgg aagctgattg ccgatatgtt tgaaacgatg
     7021 tacgaatcgc gcggcatcgg gctggcggcg acgcaggtcg atgtgcacga gcgcgtggtc
     7081 gtgatggatt tgaccgaaga ccgcagcgaa ccgcgcgtgt tcatcaaccc cgtcatcgtt
     7141 gaaaaagacg gcgaaaccac ttacgaagag ggctgcctgt ccgtgccggg catttacgac
     7201 accgtaaccc gcgccgaacg cgtcaaggtc gaggctttga acgaaaaagg cgaaaagttc
     7261 acgctggagg cggacggctt gctggcgatt tgcgtgcagc acgagttgga ccacctgatg
     7321 ggcatcgtgt ttgtcgaacg cctgtcgcag ctcaagcagg gacgcatcaa aaccaagctg
     7381 aaaaaacgtc agaaacatac gatttgaccc ttttgccgtg ccgtctgaac gctgcaaagt
     7441 tttcagacgg cacggtcttg tccgacaacc ttacgcatac gcaggaatat gctatgaaag
     7501 tcatctttgc cggcacgccc gattttgccg ccgccgcctt aaaagccgtt gccgccgccg
     7561 gttttgaaat cccgctggtg ctgacccagc ccgaccgtcc gaaagggcgc ggtatgcaac
     7621 tgaccgcccc gcccgtcaaa caagccgcgc tggaactcgg tttgcgcgtg gcacagcccg
     7681 aaaaactgcg taacaacgcc gaagccctgc aaatgctcaa agaggtcgag gcagacgtaa
     7741 tggtggttgc cgcctacggt ttgattctgc cgcaggaagt gttggatacg ccgaaacacg
     7801 gctgcctcaa catccacgct tcgctgttac cccgttggcg tggcgcggcg ccgattcaac
     7861 gcgcgattga agccggcgat gccgagacag gcgtgtgtat tatgcagatg gacatcggtt
     7921 tggacaccgg cgatgtggtc agcgaacacc gctacgccat ccaaccgacc gataccgcca
     7981 acgaagtcca cgacgcgctg atggaaatcg gtgcggcggc ggttgttgcc gatttgcaac
     8041 agcttcaaag caaaggccgt ctgaacgcgg tcaaacagcc cgaagaaggt gttacttacg
     8101 cccaaaaact aagcaaagaa gaggcgcgta tcgattggag cgaaagcgcg gcggttatcg
     8161 aacgcaaaat ccgcgccttc aaccccgtgc ctgccgcgtg ggttgagtat cagggcaagc
     8221 cgatgaaaat ccggcgggcg gaagtggtgg cgcaacaagg cgcggcaggc gaagtgttgt
     8281 cctgttcggc ggacggtttg gtcgttgcct gcggcgaaaa cgcgctgaag attaccgaat
     8341 tgcagcctgc cggcggcagg cgtatgaata tcgcggcgtt tgcggcggga cggcatatcg
     8401 aagcagggac gaagctgtaa atcccttcag acggcattcc gatccgcaaa cgggaatgcc
     8461 gtctgaaacc atcagttgaa gaaagcgaat cacataatat gagtatggca cttgcccaaa
     8521 aacttgccgc cgacagcatt gcggcggttg ccgaaggacg caaccttcag gacgtgttgg
     8581 cgcaaatccg caccgcgcat cccgacctta tggcgcagga aaacggcgcg ttgcaggaca
     8641 tcgcctacgg ctgccagcgt tatttgggca gtttgaaaca tatgctcgcg cagatgctga
     8701 aaaagccgat tggcaatccg cagctcgaaa gcctgctttt ggcggcgttg taccagctgc
     8761 attacacgcg caacgcgccc cacgccgtgg tcaatgaggc ggtggaaagc atcgcgaaaa
     8821 tcggacgcgg gcagtaccgt tcgtttgcca acgcggtttt gcgccgcttt ttgcgcgaac
     8881 gcgacaagct tgtggcttcc tgtaaaaaag acgatgtagc gaaacacaac ctgccgctgt
     8941 ggtgggtggc ttacttgaaa aaccattatc cgaaacactg gcacaacatc gccgccgcgc
     9001 tgcaatccca tccgccgatg actttgcgcg tcaaccgccg acacggcaat gccgaaagct
     9061 atttggaaaa actggtggcg gaaggtatcg cggctaaggc gttggacgaa tatgcggtta
     9121 cgttggaaga agccgtgccg gtgaaccgcc tgcctggttt ttcagacggc attgtttcgg
     9181 tacaggactt cggcgcgcag caggcggcgt atttgttaaa cccgaaagac ggcgaacgga
     9241 ttttggacgc gtgcgccgcg ccgggcggca agacggggca tatcttggaa ctggcggatt
     9301 gccgtgttac cgccttggac attgatgcag gccgtctgaa acgggtggaa gacaatatcg
     9361 cgcgtctggg ctttcagacg gcatcgacgg cgtgtgccga tgcacaggac ctgtcggcat
     9421 ggtatgatgg gaaaccgttt gatgccgtcc ttgccgacgt gccgtgtacc gcctcgggcg
     9481 tggcgcggcg caatcccgac gtgaaatggc tacgccgtcc gaccgacgcg ctcaaaaccg
     9541 cccgccagca ggaagccctg ctagatgcat tgtggcaggt gctgaaaagc gggggaagga
     9601 tgttgatcgc tacctgttcc gtgttcgtcg aggaaaacga cggacaattg caaaaattcc
     9661 tcaaccgcca tgccgatgca gaactgatcg aatcgcgggt gcttttaccg aacaaacacc
     9721 aagatggctt ttattacgcg cttattcaaa agcattaaac aatggcttgt gctgctgccg
     9781 atgctttccg ttttgccgga cgcggcggcg gaggggatag atgtgagccg cgccgaagcg
     9841 aggataaccg acggcgggca gctttccatc agcagccgct tccaaaccga gctgcccgac
     9901 cagctccaac aggcgttgcg ccggggcgtg ccgctcaact ttaccttaag ctggcagctt
     9961 tccgccccga taatcgcttc ttatcggttt aaattggggc aactgattgg cgatgacgac
    10021 aatattgact acaaactgag tttccatccg ctgaccaacc gctaccgcgt taccgtcggc
    10081 gcgttttcga cagactacga caccttggat gcggcattgc gcgcgaccgg cgcggttgcc
    10141 aactggaaag tcctgaacaa aggcgcgctg tccggtgcgg aagcagggga aaccaaggcg
    10201 gaaatccgcc tgacgctgtc cacttcaaaa ctgcccaagc cttttcaaat caatgcattg
    10261 acttctcaaa actggcattt ggattcgggt tggaaacctc taaacatcat cgggaacaaa
    10321 taatgcgccg ttttctaccg atcgcagcca tatgcgccgt cgtcctgttg tacggactga
    10381 cggcggcaac cggcagcacc agttcgctgg cggattattt ctggtggatt gttgcgttca
    10441 gcgcaatgct gctgctggtg ttgtccgccg ttttggcacg ttatgtcata ttgctgttga
    10501 aagacaggcg cgacggcgta ttcggttcgc agattgccaa acgcctttcc gggatgttta
    10561 cgctggttgc cgtactgccc ggcgtgtttc tgttcggcgt ttccgcacag ttcatcaacg
    10621 gcacgattaa ttcgtggttc ggcaacgata cccacgaggc gcttgaacgc agcctcaatt
    10681 tgagcaagtc cgcattgaat ctggcggcag acaacgccct cggcaacgcc gtccccgtgc
    10741 agatagacct catcggcgcg gcttccctgc ccggggatat gggcagggtg ctggaacatt
    10801 acgccggcag cggttttgcc cagcttgccc tgtacaatgc cgcaagcggc aaaatcgaaa
    10861 aaagcatcaa cccgcacaag ctcgatcagc cgtttccagg taaggcgcgt tgggaaaaaa
    10921 tccaacgggc gggttcggtc agggatttgg aaagcatagg cggcgtattg tacgcgcagg
    10981 gctggctgtc ggcgggtacg cacaacgggc gcgattacgc cttgtttttc cgtcagccgg
    11041 ttcccaaagg cgtggcagag gatgccgtct taatcgaaaa ggcaagggcg aaatatgctg
    11101 agttgagtta cagcaaaaaa ggtttgcaga cctttttcct ggcaaccctg ctgattgcct
    11161 cgctgctgtc gatttttctt gcactggtca tggcactgta tttcgcccgc cgtttcgtcg
    11221 aacccgtcct atcgcttgcc gagggggcga aggcggtggc gcaaggcgat ttcagccaaa
    11281 cccgtcctgt tttacgcaat gacgagttcg ggcgtttgac caagttgttc aaccacatga
    11341 ccgagcagct ttccatcgcc aaagaagcag acgagcgcaa ccgccggcgc gaggaagccg
    11401 ccagacatta tcttgaatgc gtgttggagg ggctgaccac gggcgtggtg gtgtttgacg
    11461 aacaaggctg tctgaaaacc ttcaacaaag cggcggaaca gattttgggg atgccgctta
    11521 cccccctgtg gggcagcagc cggcacggtt ggcacggcgt ttcggcgcag cagtccctgc
    11581 ttgccgaagt gtttgccgcc atcggcgcag cggcaggtac ggacaaaccg gtccatgtga
    11641 aatatgccgc gccggacgat gccaaaatcc tgctgggcaa ggcaaccatc ctgcccgaag
    11701 acaacggcaa cggcgtggta atggtgattg acgacatcac cgttttgata cacgcgcaaa
    11761 aagaagccgc gtggggcgaa gtggcaaaac ggctggcaca cgaaatccgc aatccgctca
    11821 cgcccatcca gctttccgcc gaacgtctgg cgtggaaatt gggcgggaag ctggatgagc
    11881 aggatgcaca aatcctgacg cgttcgaccg acaccatcgt caaacaggtg gcggcattga
    11941 aggaaatggt cgaagcattc cgcaattatg cgcgttcccc ttcgctcaaa ttggaaaatc
    12001 aggatttgaa cgccttaatc ggcgatgtgt tggcattgta tgaagccggt ccgtgccggt
    12061 ttgcggcgga gcttgccggc gaaccgctga tggtggcggc ggatacgacc gccatgcggc
    12121 aggtgctgca caatattttc aaaaatgccg ccgaagcggc ggaagaagcc gatgtacccg
    12181 aagtcagggt aaaatcggaa gtggggcggg acggtcggat tgtcctgacg gtttgcgaca
    12241 acggcaaagg gttcggcagg gaaatgctgc acaacgcctt cgagccgtat gtaacggaca
    12301 aaccggcggg aacgggattg ggtctgcccg tggtgaaaaa aatcattgaa gaacacggcg
    12361 gccgcatcag cctgagcaat caggatgcgg gtggggcgtg tgtcagaatc atcttgccaa
    12421 aaacggtaaa aacttatgcg tagcagcgat attttaattg tagacgacga aatcggcatc
    12481 cgcgacctgc tgtcggaaat cctgcaggac gaaggttatt cggtcgcatt ggcggaaaac
    12541 gccgaagagg cgcgcaagct gcgccatcag gcgcgtccgg cgatggtgct gctggatatt
    12601 tggatgcccg attgcgacgg catcaccctt ttgaaggagt gggcgaaaaa cgggcagctt
    12661 aatatgccgg tcgtcatgat gagcgggcat gccagcattg acacagcagt ggaagccacc
    12721 aaaatcggtg cgctcgactt tttggaaaaa ccgatctccc tgcaaaaact gctgtctgcc
    12781 gtcgaaaacg cgttgaagta cggtgcggcg caaaccgaaa cggggcctgt attcgacaag
    12841 ctgggcaaca gtgcggcgat tcaggagatg aaccgcgaag tcgaagcggc ggcaaagcgc
    12901 acgtcccctg tatttttgac gggtgaggtg ggttcgccgt ttgaaaccgt agcgcgctat
    12961 ttccataaaa acggtacgcc gtgggtcagt ccggcaaggg tcgaatatct gatcgatatg
    13021 ccgacggaac tgttgcagaa agctgaaggc ggtgttttat atgtgggcga tattgcccaa
    13081 tacagccgca atatccaaac cggcattgcc tttatcatcg gcaaggcaga acgctgccgc
    13141 gtcagggtgg tcgcatcggg cagcagggcg gcaggttcag acggcattgc ctgcgaggaa
    13201 aagctggcgg aactgctgtc ggaatcggtc gtccgtattc cgccgctgcg tatgcagcat
    13261 gaagacattc ccttcctgat acaggggatt gcctgcaatg tggcggaaag ccaaaagatt
    13321 gcgcctgcct cattcagtga agaggcactt gccgcattga cccgttacga ctggccggga
    13381 aatttcgacc aactgcaaag cgtcgttgca acgctgttgt tggaggcgga cggacaggaa
    13441 atcggcgcag gggcggtttc ttcccttttg gggcagaatg tgcctgccga gggagcggaa
    13501 gatatggtgg gcgggtttaa tttcaacctg cccctgcgcg aattgaggga ggaggtggag
    13561 cggcgttatt tcgagtacca catcgcccaa gaaggtcaga atatgagcaa agtggcgcag
    13621 aaagtcggtt tggaacgcac gcacctttac cgcaaactca aacagctcgg catcggcgtt
    13681 tcgcgccggg cgggggaaaa aaccgaagaa taggcccgga cggccggttt tccggctgcg
    13741 ggcttttgtt ttcagacggc atttggtgca aatgccgtct gaaatcgtaa ggggacggat
    13801 tttatgacag aggacgaacg tttcgcgtgg ctgcaattgg cgtttacgcc ctatatcggc
    13861 gcggaaagct tcctgctgct gctgcgccgt ttcggcagcg cgtcaaacgc cctgtccgca
    13921 ccggcggaac aggtcgcccc ggcggtgcgg cacaagcagg cggccgaggc ttggcgcaat
    13981 gcggaaaaac gcgcctcggc gcggcaggcg gcagaagcgg cgttggaatg ggaaatgcgg
    14041 gacggatgcc gtctgatgct gcttcaggat gaagatttcc ccgaaatgct gacgcagggg
    14101 ctgaccgcgc cgccggtttt gtttttgcgc ggcaacgtgc ggctgctgca caagccttcc
    14161 gccgccatcg tcggcagccg ccatgccacg ccgcaggcga tgcggattgc caaagatttc
    14221 ggcaagtcgt tgggcgggca aaatatcccc gttgtgtcgg gtatggcttc cggtatcgat
    14281 actgccgccc atcagggcgc actggaggca gaaggcggca ccatcgccgt gtgggggacg
    14341 ggtatagacc gcatttaccc gccgtccaat aaaaaccttg cctatgaaat cgccgaaaaa
    14401 ggattgattg tcagcgagtt tcccatcggt acgcgcccgt atgccggcaa ctttccgcgc
    14461 cgcaaccgcc tgattgccgc gctgtcgcag gttacgctgg tggttgaagc tgcgttggaa
    14521 tccggttcgc tgattaccgc cggcttggcg gcagaaatgg ggcgcgaagt gatggcggta
    14581 cccggttcga tagacaatcc gcacagcaaa ggctgccaca aactgattaa agacggcgcg
    14641 aaattggtgg aatgcctgga cgacatcctg aacgaatgcc cggggctatt gcaaaatacg
    14701 ggtgcttcat catattctat aaataaggat acgcccgaca cgggcagtcg cgccgttcag
    14761 acggcatacg ccccgccgcc tgccgcaaaa atgccgtctg aaggggcggc aggcggcaca
    14821 gccgtcggcg gcatactgga taaaatgggt ttcgacccca tccatcccga cgtgcttgcc
    14881 ggacagttgg ctatgcctgc cgcagatttg tatgccgcac tgttggaatt ggaattggac
    14941 ggcagcgttg ccgcaatgcc cggcggcaga taccagcgta tccgaacttg aacgcacttt
    15001 atattaagga acacgaatga ccgaagtcat cgcctacctc atcgaacatt tccaagattt
    15061 cgatacctgt ccgccgcccg aagacttggg tatgctgctt gaagaagcgg gtttcgatac
    15121 gatggaaatc ggcaacaccc tgatgatgat ggaagtattg ctcaacagct ccgaattttc
    15181 cgccgaacct gccgacagcg gcgcattgcg cgtgtacagc aaagaagaaa ccgacaacct
    15241 gccgcaggaa gtgatggggc tgatgcagta tctgattgaa gaaaaagccg tcagctgcga
    15301 acagcgggaa atcatcatcc acgcgctcat gcacattccg ggcgacgaaa ttaccgtaga
    15361 taccgccaaa gtgctgaccc tgctgctttt atgggcaaac aagagcgagc tgcccgtgtt
    15421 ggtcggcgac gagctgatga gcgcgctttt actcgacaac aaacccacga tgaactgaag
    15481 cggcttcaga cggcccgccc gagtccgtct gaaacgtcgg catcaaaacc accatccaga
    15541 gaacgacaaa tggcgaaaaa cctattaatc gtcgaatccc cgtccaaagc caaaaccctg
    15601 aaaaaatatt tgggcggcga ttttgaaatc cttgcatcct acggacacgt ccgcgacctc
    15661 gtccccaaaa gcggcgcggt cgatcccgac aacggctttg cgatgaaata ccaactcatc
    15721 agccgcaacg gcaaacacgt cgatgccatc gtcgccggag ccaaagaagc cgaaaacatc
    15781 tacctcgcca ccgacccgga tagggaaggc gaagcgattt cttggcatct tttggaaatc
    15841 ctcaaatcca aacgcggcct gaaaaacatc aagccgcagc gtgtcgtgtt ccacgaaatc
    15901 accaaaaacg ccgtgctcga tgccgttgcc catccgcgcg aaatcgaaat ggacttggtc
    15961 gatgcgcaac aagcccgtcg cgctttggac tatttggtcg gctttaacct ttcgccattg
    16021 ttatggaaaa aaatccgccg cggtttgagc gcgggtcgtg tgcaaagtcc cgctttgcgc
    16081 ctgatttgtg agcgtgaaaa cgaaatccgc gcgtttgaag cgcaggaata ttggacggtg
    16141 catctcgaca gccacaaagg ccgcagcaag tttaccgcca aactcgccca atacaacggc
    16201 gcgaaactcg aacaattcga cctgccgaac gaagccgcgc aagccgacgt gttgaaagaa
    16261 ctcgaaggca aagaggccgt cgttaccgcc attgaaaaga aaaagcgcag ccgcaatccc
    16321 gccgcgccgt tcaccacttc taccatgcag caggatgccg tgcgcaaact cggcttcacc
    16381 accgaccgca ccatgcgtac cgcccaacag ctttatgaag gtatagacgt agggcagggc
    16441 gcgatcggtc tgattaccta tatgcgtacc gacagcgtga atttggcgga tgaagcctta
    16501 accgaaatcc gccattacat cgaaaacaaa atcggcaaag aatatctgcc gagtgccgcc
    16561 aaacaataca aaaccaaatc caaaaacgcc caagaagcgc acgaagccat ccgcccgact
    16621 tccgtgtacc gcacgcccga aagcgtcaaa cccttcctga gcgcagacca gttcaaactc
    16681 tatcaaatga tttggcagcg taccgtcgcc tgtcagatga cgcccgccaa attcgaccaa
    16741 accaccgtcg atattaccgt cggcaaaggc gtattccgcg taaccggaca agtgcagact
    16801 ttcgcaggct tcctcagcgt ttacgaagaa agcagcgacg atgaagaagg cgaagacagc
    16861 aaaaaactgc ccgaaatgag cgaaggcgac aaattgcccg tggacaaact ctacggcgaa
    16921 caacacttta ccactccgcc gccacgctac aacgaagcca cgctggttaa agccctcgaa
    16981 gaatacggca tcggccgccc ctcgacctac gccagcatca tctccacgct caaagaccgc
    17041 gaatacgtta cccttgagca aaaacgcttc atgcccaccg acacaggcga catcgtcaat
    17101 aaattcctga ccgaacactt cgcccaatac gtcgattacc acttcactgc caaactcgaa
    17161 gaccagcttg acgaaattgc cgacggcaaa cgccaatgga ttcccttgat ggacaaattc
    17221 tggaaaccgt tcatcaaaca agtggaagaa aaagaaggca tcgaacgcgc caaatttacc
    17281 acgcaggaac ttgacgaaac ctgccccaaa tgcggcgaac acaaactgca aatcaagttc
    17341 ggcaaaatgg gtcgcttcgt tgcctgcgcc ggttatccag agtgcagcta cacccgcaac
    17401 gtcaacgaaa ctgccgaaga agccgccgag cgcatcgcca aagccgaagc agagcaagcc
    17461 gaacttgacg ggcgcgaatg ccccaaatgc ggaggacggc tggtgtacaa atacagccga
    17521 accggcagca aattcatcgg ctgcgccaac tatccgaaat gcaaacacgt cgagccgttg
    17581 gaaaaaccga aagacaccgg cgtccaatgc ccgcaatgca aaaaaggcaa cctcgtcgag
    17641 cgcaaatccc gctacggcaa actgttttac agttgcagca cctatcccga ctgcaactac
    17701 gccacctgga acccgcccgt tgcagaaacc tgtccaaaat gcgcgtggcc ggttttgacc
    17761 atcaaaacca ccaaacgctg gggtgtggaa aaagtctgcc cgcaaaaaga atgcggctgg
    17821 aaagaacaga ttgaaccgcc tgcaccgaaa gagtgaagcg gttggggttg agatgaaaga
    17881 aaatgccgtc tgaaaggggt ttcagacggc attttcttca tgtgaaaaca aacctactca
    17941 gattgaaact gtttacacac ttctatatta atctgtataa agtcctgcca cgacatttgt
    18001 tctgataagt aatggtgata atagtcctcc acacgacaga ccaaagggcg cgtttcatag
    18061 atagtgcata agcgcgttga atcatcgaaa tggcggcagg taccatctcc ccgatccagg
    18121 tatatggttt gttcgcttaa attgaccttt tgacagcaca aaccgcaagc agagcatggg
    18181 aagggttctg atgaggcaat caaaaatcga ttactttcac attgtcgttt ttcaaagctg
    18241 caatcagatt gtccacctgt ttcagtggag aatctttggc aatgctcaca atgccgttaa
    18301 ttgctgtatc aatgacgtgg atatttcccg cttccattcc tttgtccaat gcctcaaata
    18361 aaccgtcaat cattttgcga cgttctttga acgtattttc cagatacaag cgcaaaattt
    18421 cttgttggtt tttcaattct gctaatcgga catcacgcca tgcaccaatg acttcacgtt
    18481 tggttttctc ttgtgcagca attttcttat attcgttgcg tgcttctaag atgcgaaaaa
    18541 acgaattaga agctgcatca aacggaatgg ttgctggatt ctttgttggt agcttattaa
    18601 ggatttggat ttttcccatt atactgtacc taattcgata ttcagacaac cttcgcattg
    18661 atgacggata ttggctacag gagatccgtc ctcttccata ataggcgtat tcagcagatt
    18721 tttaatcgcc ttgccgatga ccagcatggt atggaaatca ggatggtcgg catggtcgac
    18781 acgaaccttt tcgaaacgtt taaccatttc ttctaaggta tggcgtattt cccttgcgtt
    18841 ttccttcaac ccttctaatc cttctgtaat taaatccatc tcgtcaatag cctcatcgat
    18901 ttcagcacta tatgctcgtg cttccgtcag tgcctcttcc gccttgcttg ccagcataaa
    18961 tccaccgatt gctaaagcag gtcctgccac gatgccaccc aaagccacca tgccgcctgc
    19021 cataccgaat ccacctgctg ccaatgagcc acctccgagc caagcaaggg ttgcattggt
    19081 tgccgcagca cctgaaaggg tggagattgc tgttcctgtg gaagcagttg caatcatagg
    19141 tactgcaccg tatacgccaa agcctgccag tgcgccagta atggcactac tgccgagatt
    19201 ggtgcttaac tctaaagaag tttgcaccat agtttccatt tcttttaatt cagcaatatc
    19261 aaatgtactg ttaaaacccg acagttcgct tttcgcatgc ttgttgctgg tgttgtttag
    19321 gacttgaaca atatgtctga tttgattgtt aaaaatatca accttaaact gtcccagctc
    19381 ctcaaaagca aggttggttt cgtctttagt cgaattcaat tctcttttcc tgcgtttata
    19441 acggcgttct gcacgctcac ctatttcttt tgcatcatct atatcgctga gtgcagctgc
    19501 tcctttgaca atacctgttg cagcaagggc ggcggctgca ccccaaagta aaactggaat
    19561 agccatgtgt aatttcctaa agtgtataaa aagttaaaaa tcttgaagtt tcaatgtgta
    19621 ttgtaatttt aaaattctat taaaaataca tttgccattc cagcaaacta aagtttaaaa
    19681 tctatccaaa taatttaacc atctatacag aaagttcagc tcatggaaac ccacgaaaaa
    19741 atccgcctga tgcgcgaatt gaacaaatgg tcgcaggagg atatggcgga aaagctggcg
    19801 atgtcggcag gcgggtatgc caaaatcgaa cggggcgaaa cgcagttgaa tatcccgcgt
    19861 ttggagcagt tggctcagat tttcaaaatc gatatgtggg acttgctcaa atcgggcggc
    19921 ggcgggatgg tgtttcagat taatgaaggt gatagtggtg gcgatattgc gttgtatgcg
    19981 tcaggtgatg tttcgatgaa aatagaattt ttaaaaatgg agttgaaaca ttgtaaagaa
    20041 atgttggaac aaaaagacaa agaaatcgag ttgctccgca agctgaccga aaccgtttaa
    20101 acagatatgc cgtctgaaaa aagttttcag acggcatatt ctttgacagg tcttgtataa
    20161 taccgtttga acttacaggt ttttgattat ggcggcaggc aaacatacca aacacagcaa
    20221 ccaggtacgc attatcggcg ggcaatgtcg gggcaggaaa ttgagttttg catccgccaa
    20281 cggactgcgt ccaacccccg atagcgtgcg tgaaaagctg tttaactggc tgggacagga
    20341 tttgacgggt aaaacggttt tggatctctt cggaggcagc ggcgcactcg gtatagaagc
    20401 cgcttcgcgc aacgccaaac gcgtgctgat ttcggataac aaccgccaaa ccgtgcagac
    20461 cttgcagaaa aacagtcgcg aactgggttt ggggcaggtg caaatcgtct gttcagacgg
    20521 catcgcatat ttgaagaccg tatccgaaca gtttgatgtc gtctttctcg acccgccgtt
    20581 tgcatggcag gactggcaaa tcctgttcga tgccttgaag ccgtgcctga acccccgggc
    20641 attcgtctat ctcgaggcgg gtaggctgcc ggatatcccc gattggctga cggaatatag
    20701 agaagggaaa tcagggcaga gtacattcga attaagggtt ttccaagtgg ctgaataata
    20761 tgcgctttga taatcatttc cgagttgtaa acattcgttt gcaaccgtcc ggttcaaaaa
    20821 aaccttgtgc tataatccgc gcccgcccgg ttttgataat ttagtggaaa aggaaaagaa
    20881 atgtcgcttt ttattaccga cgagtgcatc aactgcgacg tatgcgaacc cgaatgcccc
    20941 aatgatgcca tttcccaagg cgaggaaatt tacgaaatca accccaacct ctgcacgcag
    21001 tgcgtcggac actacgatga gccgcagtgc cagcaggttt gcccggtgga ctgcatcctg
    21061 attgacgaag aacatcccga aacccatgac gagttgatgg cgaaatacga aaagattatc
    21121 cagtttaaat aaattctttt taaaacatca aattatgtct gttttgaaat aaaatcaaaa
    21181 aaaaacttga cggaaaagca agccgctaat aaactaacgt tctcttttgg agggattccc
    21241 gagcggtcaa agggggcaga ctgtaaatct gttgcgaaag cttcgaaggt tcgaatcctt
    21301 ctccctccac caaaattctt acttggggca gtagcgagta atgcgggtgt agctcaatgg
    21361 tagagcagaa gccttccaag cttacggtga gggttcgatt cccttcaccc gctccaaaca
    21421 attaggccca tgtagctcag gggtagagca ctcccttggt aagggagagg ccggcagttc
    21481 aaatctgccc atgggcacca tctctcgatt attcatttct ttaaggctta gatatatagg
    21541 atattgccat ggctaaggaa aaattcgaac gtagcaaacc gcacgtaaac gttggcacca
    21601 tcggtcacgt tgaccatggt aaaaccaccc tgactgccgc tttgactact attttggcta
    21661 aaaaattcgg
//
LOCUS       DBBZXW010000021        21647 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.021, whole genome shotgun sequence.
ACCESSION   DBBZXW010000021 DBBZXW010000000
VERSION     DBBZXW010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21647
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.021"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(217..1035)
                     /gene="cysE"
                     /locus_tag="ACJJD2_000760"
     CDS             complement(217..1035)
                     /gene="cysE"
                     /locus_tag="ACJJD2_000760"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HGG7579336.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            1219..1797
                     /gene="grpE"
                     /locus_tag="ACJJD2_000761"
     CDS             1219..1797
                     /gene="grpE"
                     /locus_tag="ACJJD2_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HGG7579337.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            complement(1921..2136)
                     /gene="nqrM"
                     /locus_tag="ACJJD2_000762"
     CDS             complement(1921..2136)
                     /gene="nqrM"
                     /locus_tag="ACJJD2_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HGG7579338.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(2162..3217)
                     /locus_tag="ACJJD2_000763"
     CDS             complement(2162..3217)
                     /locus_tag="ACJJD2_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HGG7579339.1"
                     /translation="MPSETRLPNFIRALIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRGKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAYVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            complement(3369..4586)
                     /gene="nqrF"
                     /locus_tag="ACJJD2_000764"
     CDS             complement(3369..4586)
                     /gene="nqrF"
                     /locus_tag="ACJJD2_000764"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HGG7579340.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPSHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            complement(4600..5193)
                     /gene="nqrE"
                     /locus_tag="ACJJD2_000765"
     CDS             complement(4600..5193)
                     /gene="nqrE"
                     /locus_tag="ACJJD2_000765"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HGG7579341.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            complement(5197..5823)
                     /locus_tag="ACJJD2_000766"
     CDS             complement(5197..5823)
                     /locus_tag="ACJJD2_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HGG7579342.1"
                     /translation="MADMKRLKHLMFSPFINNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            complement(5823..6599)
                     /locus_tag="ACJJD2_000767"
     CDS             complement(5823..6599)
                     /locus_tag="ACJJD2_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HGG7579343.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSIIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKNTDISKTFAERIEQRVVDLATGEYVADAPKDFSARVAGKDPA
                     QSIQIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            complement(6592..7824)
                     /locus_tag="ACJJD2_000768"
     CDS             complement(6592..7824)
                     /locus_tag="ACJJD2_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HGG7579344.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            complement(7827..9170)
                     /locus_tag="ACJJD2_000769"
     CDS             complement(7827..9170)
                     /locus_tag="ACJJD2_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HGG7579345.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPVITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAITQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            complement(9519..10940)
                     /locus_tag="ACJJD2_000770"
     CDS             complement(9519..10940)
                     /locus_tag="ACJJD2_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HGG7579346.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(11298..11657)
                     /locus_tag="ACJJD2_000771"
     CDS             complement(11298..11657)
                     /locus_tag="ACJJD2_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HGG7579347.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(11654..12259)
                     /locus_tag="ACJJD2_000772"
     CDS             complement(11654..12259)
                     /locus_tag="ACJJD2_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HGG7579348.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDSFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVIENGLEGIVQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDTSAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(12306..12788)
                     /locus_tag="ACJJD2_000773"
     CDS             complement(12306..12788)
                     /locus_tag="ACJJD2_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HGG7579349.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      12992..13089
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            13299..14399
                     /gene="gcvT"
                     /locus_tag="ACJJD2_000774"
     CDS             13299..14399
                     /gene="gcvT"
                     /locus_tag="ACJJD2_000774"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HGG7579350.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLMRGKEVDVRVLKLPFVRNGQKQFD"
     gene            14561..14947
                     /gene="gcvH"
                     /locus_tag="ACJJD2_000775"
     CDS             14561..14947
                     /gene="gcvH"
                     /locus_tag="ACJJD2_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HGG7579351.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            15099..16346
                     /gene="hemA"
                     /locus_tag="ACJJD2_000776"
     CDS             15099..16346
                     /gene="hemA"
                     /locus_tag="ACJJD2_000776"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HGG7579352.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSKAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            16673..17194
                     /locus_tag="ACJJD2_000777"
     CDS             16673..17194
                     /locus_tag="ACJJD2_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
                     /protein_id="HGG7579353.1"
                     /translation="MSCFSIKRMSAFRARITAFFAAFVFLTAALPAYAERLPDFLAKI
                     QPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMALA
                     KDGTIAGAKLVDHHESIMLIGIPHLPAPGRAIRSNWLPAYIKPNFISTNRLRLKGLPT
                     VLQPSKGTGAGVP"
     gene            17083..18282
                     /locus_tag="ACJJD2_000778"
     CDS             17083..18282
                     /locus_tag="ACJJD2_000778"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HGG7579354.1"
                     /translation="MASGVYQTKLYIDKPITIEGPADRSATIEGDRSGRTIAVHAPDV
                     TLRNLTVTRSGMSLPAMDAGIYLEETAPHALIEHNNILDNSVGVYLHGSSEAMVRENK
                     IVGDATLRVNERGNGVTVWNAPGAQVVGNDISKGRDGIFSNTSTYNTYKNNRFSDLRF
                     AVHYMYTNDSEISGNISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIH
                     DNIINKAGKCVFAYNANYDKLFANHFENCQIGIHFTAAIEGTSLHDNSFINNESQVKY
                     VSTRFLDWSEGGHGNYWSDNSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSP
                     AISIVKWAQAQFPAVLPGGVVDSKPLMKPYAPKIQTRYQAMKDELLKEAETRQSEWGR
                     AENGSLN"
     gene            18340..18954
                     /locus_tag="ACJJD2_000779"
                     /pseudo
     CDS             18340..18954
                     /locus_tag="ACJJD2_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            18971..19102
                     /locus_tag="ACJJD2_000780"
                     /pseudo
     CDS             18971..19102
                     /locus_tag="ACJJD2_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            19099..19593
                     /locus_tag="ACJJD2_000781"
     CDS             19099..19593
                     /locus_tag="ACJJD2_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HGG7579355.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGSPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(19681..21342)
                     /locus_tag="ACJJD2_000782"
     CDS             complement(19681..21342)
                     /locus_tag="ACJJD2_000782"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HGG7579356.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GIGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQVIERFQLDQNSQPQTYGLGIKE
                     IWEVPSEKHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVENFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
BASE COUNT         5217 a         5396 c         5923 g         5111 t
ORIGIN      
        1 ttccgtacta tccgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
       61 tatatttccg gttgcgtggg aatcgggtgt attgaataaa aggcattttg tccgactggc
      121 aagtgccgac atcggcggca tatcaaggcg caggcttgaa gcgggcaatg tcgtctgaag
      181 cccgtttggc gtttcagacg gcattggtgc ggatattcaa atcataaagt cgatttcggt
      241 aaactggata ttttgatcca tatccgccga cggtgttttg agcgatcgcg ccacgggttt
      301 ggcgggtacg ccgacaaccg tgatggacgg cggcacgtct gaaaccacga cgctgcccgc
      361 cccgattttg gcattgctgc cgatgcggat attgcccaat atcgaggcgt ttgcgccgat
      421 catcacgccg tcgccgattt tagggtggcg gtcgccgcct tctttgcccg aaccgccgag
      481 cgttacgccg tgcaaaatcg aaatattgtt gcccaacacg gcggtttcgc cggcaacaaa
      541 gccggtggcg tggtcgagca tcagcccgta tccgaaacgg gcggcgggat ggatgtccac
      601 gccgaatact tcggacatac ggttttgcag gaaatacgcc agcgttttgc gcccgtcgag
      661 atacagccga tggttgatgc ggtgtgcctg aatcgcgtgg aagcctttga aatataaaag
      721 cggcagcgaa tattcgtcgc aggcgggatc gcgttcgtag atggctttta agtctgcttc
      781 gacgcatttg ccgatttggg tgtcgctgcc caacgcctgc tggtagattt caaacagcgc
      841 gcgcacgtcc ataatcgggc tgccgagttt gctggaaagg tggtaggcaa ggacggagcc
      901 gagggactcg tggcgcaaca cggtttggtg caaaaaactt gccagcatcg gttcggcgga
      961 gaccgcggcc gcggtttctt cgcggatggt gtgccagagg tcgaaaccgg ttgtgtttaa
     1021 atggtctttt ttcatgagtg atgacgtttg aaaatcgata tggtcggcag tatcttaccg
     1081 tctatattat tttttcggta ggggatttga aaatgaattt gaaattctct gcttttgctt
     1141 gaagtttctt gaaaatgtcc ttatcttgcg cgggtaataa ctggattttg atttccaatt
     1201 tgttttaagg gatacgatat gagcgaacag acacagcagc aaaacagtga agaagcggtt
     1261 gaaaatgtgg aggcggtgga aaccgtcgag acagtaggaa atgcggacgg tgtgcaggaa
     1321 caggctgccg cagagccggc ttatgaggat ttgcaggcgc ggattgccga gctggaagcg
     1381 cagttgaaag acgagcagct gcgcgctttg gcaaacgagc aaaacctgcg ccgccgccac
     1441 cagcaggaaa ttgcggatac gcacaagttc gccggacaga agtttgccgt ggaaatgctg
     1501 ccggtcaagg attatctgga aatggcgctt ttggatcaga gcggcaattt cgatgcgctg
     1561 aaaatgggcg tgcagatgac tttgaacgag ttgcagaaag catttgatgc tacgcaaatc
     1621 aaggaaatca accctaaagc gggcgataag ctcgatccga atatccatca ggcgatgcag
     1681 gcggtggcaa gcgaacagga gccgaatacc gtggtgggtg tgatgaagaa gggttatacg
     1741 ctgtccgacc gcgtgttgcg cccggctatg gttacggtgg cacagaagga agcctgaagg
     1801 cgtctgggga ataatctgat ttatttcctg aagcgcgttt tgcgtataaa ccgatcgaag
     1861 taaagcggca atgccgtctg aacccgcctg tcgggcttca gacggcattt tgtttcggcg
     1921 ttaacggtca acccgtatgc cgcctgcctg tttttcttca tccagtttct tttgcagggt
     1981 gtcgcaaggt gtgtcgcagt cgcacatttt tttcataccc aaggcagtaa tgccgccgca
     2041 actgcctttg atgctgcgtt tggagaaaat atagccgacc gccataccga tgatgacggt
     2101 caggaagatg ccgaaggtaa ggagcagggt tttcatggtg tttcctaatc ggtttgtatg
     2161 tttagcggag cagtttttca aattcggaag acatggcggt gcggtagccg cctttatccc
     2221 tgacaatcag gaaaacagcg agtttttcgc gctctgccag ctttaaggct tcggtttcgc
     2281 ccaatacgaa taatcctgtg gacaagccgt ccgccgtcat cgcactgtct gcgaccacgc
     2341 tgatggaggc gaggttgtgg ctgatgggtc gtttgttgtt cgggttgatg atatgggaga
     2401 ggcgtttgcc gtttttatcg acgtggaaaa tacggtaatc gccggaagtg gcaagcgaac
     2461 ggttgttcag cgggacgata atctgcgtat tgccgccttg gacgatattg ggctgctcga
     2521 taccgatgcg ccacggttcg ccgcgcgcgt ttttgccttt gccgtgcaac tcgccgccga
     2581 tttcgaccag ataattttga atgccgtatt tttccagttc gcccgcaact ttatcaacgc
     2641 cgaagccttt ggcaatcgaa gataaatcca aataggcctt ggggtgggtt ttgctcaagg
     2701 aagcgtaatc tttgccttgt ttcaaaatga ttttgtctat gcccgtataa gatgccgcct
     2761 gtttgatttg ttccggcgac ggttcacggg taacggattt gtcggggccg aatccccaaa
     2821 ggttgaccaa ggggccgacg gttacgtcca gtgcgccgtg cgtcaggcgg ttcaggcgga
     2881 cggcttcggc ggtaacgtat gcgaagtcac ttgaaatgcg gaggggtttg ccggctgtgt
     2941 gttggttgaa ccggctgatt tcagagtcgg gctgataggt ggacatctgc cggttgactt
     3001 ctttaagcgc gtcatcgatg cgcttttgta tttcggcggg ggaggggagt ttgccccgat
     3061 tatttgaaag gtatttgacg gtataggtcg tgcccatcgt ttcgccttgc agggtaacgg
     3121 tttgcgcggt ttgttccgaa caggcgttta ggaagataaa acccagggca aatatcaagg
     3181 cgcggataaa gttcggcagg cgtgtttcag acggcatagt gtttgatagt cttggcaaat
     3241 ggcttgaatt atatcgcaaa acggccggta tgtttttatg ttgatgccgt ctgaaaggtg
     3301 ttcggacggt atcggataaa aaaaggaaga aaccgaggtt tcttcctttt gtgtttgaag
     3361 ccgaatattt aaccgccgaa atcgtccaag aggatgtttt cgtcttccac acccaagtct
     3421 ttgagcattt tgatgacgga ctggttcata atcggcgggc cgcacatata aaattcgcag
     3481 tcttccggcg cttcgtggtt tttcagatgg ttttcgtaaa ccacgttgtg aatgaagcct
     3541 gtgtagccgt cccagttgtc ttccggcagt ggatcggaca gggcgacgtg ccacgtgaag
     3601 ttcgggaatt ctgctgcgag ttggtcaaag tcttcgacat agaacatctc gcgtttggaa
     3661 cgtgcgccat accagaaggt aattttgcgt ttggagttca aacgtttcaa ctggtcgaaa
     3721 atgtgggaac gcatcggagc catacccgca ccaccgccga taaataccat ttcggcatcg
     3781 gtgtctttgg cgaaaaattc gccgaacggg ccggaaatcg taactttgtc gccgggtttg
     3841 agcgaccaga tgtaggaaga catttgtccc ggaggcgcat cgggtacgcg cgggggcggc
     3901 gtggcgatac gcacgttcag cataatgatg cctttttctt caggatacga agccatagag
     3961 taggcgcgca aaatcggctc atccactttg gaaacgtatt gccacagatt gtatttgtcc
     4021 cagtcttcgt ggtattcctt aggaatgtcg aagtctttgt aggcaacagt gtgagaaggg
     4081 gcttcaattt gaatgtagcc gccggcgcgg aaaggaactt cttcgccttc aggaatggca
     4141 agcttgagtt ctttaatgaa cgtggctttg ttgtcgttgg agatgacggt gcattcccat
     4201 tttttcacgc cgaacacttc ttcggggact tcgatgtcca tgtcggtttt gacgttgacc
     4261 tgacaagaca gacggcagcc ttcgcgtgct tcgcgtttgc tgatgtggga cagctcggtc
     4321 ggcaggatgt cgccgccgcc gctttttacg acgacgcggc attgtccgca cgaaccgccc
     4381 ccgccgcagg cggaggggat aaagatgcct tcgttggcaa gcgcgcccaa gagtttgccg
     4441 ccggcgggca tcgtcagctc tttttcgccg ttgactttga tggtgatgtc gccttcgctg
     4501 accagtttgg atttggcaaa cagaatcatc agtgccaaaa ccaaaacgat gacggtaaac
     4561 atcacgatac ctaaaataat ctccataccg atccctttct tataactgga tgccggagaa
     4621 cgacataaac gccatcgcca tcaggccggc ggcgataaag gtaatgccca agcctttgag
     4681 gcctttggga gcgtccgaat atttcatttt ttcggtaatg cccgccaaag cgacaatcgc
     4741 caacatccag cccaagcccg cgccgaagcc gtatacaacg gattcgccga agttgtattc
     4801 gcgttgcgcc ataaacgata cggcgccgaa aatcgcgcag ttcacggtaa tcagcggcag
     4861 gtagatgccc aatgcgttat agagggcggg gacgaattta tccaagaaca tttccaaaat
     4921 ctgcaccaaa gcggcaatca cgccgatgaa ggtgatgaat ttcaaaaagg tcaaatccac
     4981 gccttcgaca atcgcgccgt ctttgagcag cgagtaaacg agttggttga cagggacgga
     5041 cagcccgagt acgaaaatta ccgccacacc caaaccgaat gcggtggata cttttttgga
     5101 taccgccaaa aacgtgcaca tacccaaaaa gaaggatagt gccatatttt caatgaagac
     5161 ggatttgatg aagaggctca aatagtgttc catagcttat tcctccgcct gttcgggttt
     5221 ccaggtacgc agtccccaaa tcaaaaagcc gatgatgaag aacgcgctgg gggcgagcag
     5281 gaacaagccg ttggtctgat accagccgcc gtcctgcacg gtttggaaaa cggtgtagcc
     5341 caagagtttg cccgagccaa tcagttcgcg gacggtggcg acgacaagca gcattatccc
     5401 gtagcccgcg ccgttgccga tgccgtcgat caggctttcc agcggcggct ctttcatcgc
     5461 aaatgcttcg gcgcggccca tcacgataca gttggtaata atcagaccga cgaatacgga
     5521 aagctgtttg gacaattcgt aggcaaatgc ctgcaagagt tggtcgacca gcgtaaccag
     5581 cgacgcgata atcgccattt gcacgataat acggatgctg ttggggatgt agttgcgtac
     5641 cagcgaaatg aagaagctgg aaaaaccggt taccaaagct acggaaatac ccatcacgat
     5701 ggccgtctga agtttggtgg taaccgccaa agccgaacaa atacccaaaa cctgcaaggc
     5761 aatcgggttg ttgttgataa agggtgaaaa catcaaatgt ttcaagcgtt tcatatcagc
     5821 cattattgcg ctcctgctga tttcaatttg ttcaggtagg ggatatagcc gttttcgccg
     5881 aaccagtagg cgaacgaacc ttgcacgcct ttggatgtca gcgatgcacc ggagagggca
     5941 tctacgccgt gttctttgtc cgaacccgcg cctttgccga cgtgcagggc gagtttgcct
     6001 tgtccgtcaa acagtttttt gccgacgaat ttttgctgcc acaaaggatt gccgatttcg
     6061 ccgcccaagc ccggggtttc gccttgctcg tagtaggtaa tgccgttgat ggtgttgccg
     6121 tcgggttgga tggcgacaaa gccgtacatg accgaccaca aaccgttgcc gtgcatcggc
     6181 aggatgattt ggccgatttt gccgtcttcg ccttttacca aataaacctc ggtgtatttg
     6241 gcacggcttt tgatgcctgc caaatcgtct tcaggtttga tttggatgct ttgggcaggg
     6301 tctttgccgg caacgcgtgc gctgaagtct ttaggcgcat cagcgacata ttcgccggtc
     6361 gccaaatcga caacacgttg ctcgatacgc tcggcaaagg ttttgctaat gtcggtgttt
     6421 ttatccatca aaccggctac gctcaagata tagccttgtt tgtcttggag tttttgtttc
     6481 tcttggatgg gtttcaaacc gacgaccgca ccagcaacga tgatggaaca aatcaggctg
     6541 accgccaaca cgacaatcag cgtgccgctg aagctgtctt tatcgaattt cttagccatt
     6601 gctgcgcgcc tttctgcgtt tgatgttcgc ttgtgcgacg aaatagtcga aaatcggggc
     6661 aaacaggttg gcaaacagaa tcgccaacat catgccttcg gggtaagccg gattgaccac
     6721 acggatcaat acgcacatca caccgattag cgcgccgtac caccatttgc cgacattggt
     6781 aaaggaagca gaaacggggt cggttgccat aaacagcata ccgatggcga agccgccgac
     6841 gaccaaatgc cagtaccaag gcatagcaaa catagcgttg gtgtccgaac cgatgaagtt
     6901 gaacagcgaa gacatggcaa tcataccgat catcacgccg gcaataatgc gccaagaagc
     6961 gatgcgggca aacacgataa acgcgccgcc gattaagagt gccaaagtgg atacttcgcc
     7021 gatggagccg ggcagtttgc cgataaacgc atccatccaa gtgatggttt gaccggttac
     7081 ggcgtttttc aggccgtctg caccgtgtgc cgcccattgc gccagcgcgg ttgcgccgga
     7141 atagccgtca accgccgtcc aaaccgcatc gccgctcaag ttggcagggt aggcgaagaa
     7201 caggaaggca cggcctgcca gcgcagggtt catgaagttt ttacctgtac cgccgaatac
     7261 ttctttcgca accaccacgc cgaaagaaat acccaaagct gcctgccaca gcggcagcgt
     7321 gggcggaacg attaaggcaa acagaatcga ggtaacaaag aaaccttcgt tgatttcatg
     7381 tttgcgcacg gtggcgaaca aaacttccca gaaaccgccg acaataaata cggtcgcgta
     7441 aatcggcagg aagtaaatcg cgccgaacag cattttgccc aacacgcccg cttcagacga
     7501 catattgatg cccaaagcgt tggcaagggc gtaatgccag tcgttggcga tgctttgttg
     7561 cagcaaatcg ggcgttaacg caccgaatgc ctgtgcgccg acgttgtaca taccgtagaa
     7621 catggcaggg aacaaagcca gccacaccaa aatcatcatg cgtttggagt cgagcgcatc
     7681 gcggacgtgt gccgctttgc gcgttaccgc accggatgta tagaaaatcg tcgccgcagc
     7741 ttcgtagagg gcataccatt tttcatgttt gccgcccggc aggaagtgcg gttcgatttt
     7801 ttccagaaaa tgtttcaagc ccataatcag ccttccttct caatggtttc cagcacctta
     7861 cgcaacagcg ggccgtattc gtatttgccc gggcagacga agctgcacaa agcgaggtct
     7921 tcttcgtcca attccaagca acccaatgcc tgcgcgctgt cggtatcgcc gacgattaaa
     7981 tcgcgcaaaa gcagggtagg caggatgtcc agcggcatta cgcgctcgta agtaccaatc
     8041 ggcaccatgg cgcggtcgcc accgttgacg gctgtcgtga acttgaagag tttgtttttc
     8101 aggaaatggc cgagggtcgt acgcgtgatg gagtatttgt ccggctgcgg cgcaacccag
     8161 ccgaacagct ctttgctgcg gccttcttcg ataacggaaa tctgattgtg gtagcgtccc
     8221 aaataatcgt gcgcgccttg tgtaatcgcg ccgttcaata ccgaaccgga aatcacgcgg
     8281 ttgtctgcgt caaccaattc gcccgcagta atttgcgata ctttcgcacc caaaacggta
     8341 cgcaagaggc gtggtttgtt gacttgagaa ccacccaaag caatcacgcg ctcggtgttc
     8401 agacggcctg ttgcaaacaa acgtccgatg gcaattacat cttgataatt gatggtccaa
     8461 acggttttgt ttgcaccgac cggctcaatg aaatgaatgt gcgtgccact caaaccggcc
     8521 ggatgcgggc cgccgaattc atgtgtttcg atgttggcag cattttcaga cggcacgtct
     8581 gcgccagctg ccttacacac atggatttta cgctcggtca aacggctcaa taccagcaaa
     8641 cctcgtctga aatcctcggc ggcttctttg atcacaacca cagggtctgc cgccagcgga
     8701 ttggtgtcca tcgcattgac gaagatggcg aacggctcgg catcgacggc agggattttg
     8761 ctgaacggac gggtacgcag cgcagtccac aaaccggatt gaatcagatt gcggcgcact
     8821 tcttcgccgc ttaagtttgc caacgcttcg ggcgcgtagc gttcgaactc gatttcgtcg
     8881 ttgccttcaa cggcaatcac aaccgactga agcacgcgct tttcgccgcg atggatggcg
     8941 gcgattttgc ctgaaaccgg cgcggtaaac accacgcccg gattcttttt gtcttcaaac
     9001 agcacttggc cttttttgac ggcatcgcct tccttgactt tcatcgaggg gcgcataccg
     9061 gcatattctt cgccaagcaa cgcgacttcg gtaatgacgg gcccgtcata aatgacttgc
     9121 tccggtctgc ccgcgatggg caggtttaga ccttttttga ttttaatcat atatttgcat
     9181 tacttgtgat ggttaaggta aaaacggcgt gttttgatac cgtgtcgcgt ggcatcaaaa
     9241 gcattgaata aattaatgta gcaaagtgtt agattctatc aggaattgta cctgtttgtc
     9301 agatttgctg cttttttcct tgcggaagct gtttttatag tggattaaat ttaaaccagt
     9361 acggcgttgc ctcgccttgc cgtactattt gtactgtctg cggcttcgtc gccttgtcct
     9421 gatttttgtt aatccactat aattgtcgga agggaaaaat attgatttga ttatgccgga
     9481 atttaaaatg ccgtctgaat gttcagacgg catagcgttt acagcagttt gaaaacgaaa
     9541 aagataaggg tatgtacgat gaagacgggt gtcaggaagg cgaccgacca catcatatag
     9601 ccgaagaaag tcggcatcgg tacgccgcgc tgttcggcaa tggccttgac catgaagttc
     9661 ggtgcgttgc cgatgtaggt cagtgcgccc atgaataccg aacccataga aaccgccagc
     9721 agcgaatgaa acagggtacc cgtcatcaag gcttgggcat cgccgcccgc catattgaaa
     9781 aaaacgagat aagtgggcgc gttatccaag aatgccgaca atatgccgct catccaaaaa
     9841 tacatcacat taatcggatg acctgccgta tcgtgaacca gcgataccac cccgcccagc
     9901 gcgcctgcct cgcctgcttt cagaatgctc aggacgggaa agatggtgat gaagatgccg
     9961 aggaagagtt tgcccacttc ggcgatgggt tcaaagttga attcgttgcc tgcgcggact
    10021 tgtttgggcg tgattgccat agatacggcg gtcaatgcaa tcaggatgac atcgcggacg
    10081 aggttttgca gggcgtaacg gctgccgagg atttcaaatc ccgggtgttc gggtttccaa
    10141 aggccggaca ttagaaccgc gccgaccacg cccgaaagca ggaggaagtt ccatttgccg
    10201 aagatggcga ttttttcggg tttttcctgt tgtgccggcg tatcttgtgc aatgctttcc
    10261 tgtttgaaga aacggttgtc gatgaaatag aaggcggtca acaggacagc ggtgctgatc
    10321 aggacggggg cgaacatatg tttgaccgtc cacatgaaat ctacgccttt gaggaagccg
    10381 aggaagagtg gggggtcgcc caaaggggtc agaccgccgc cgatgtttgc aaccaggaaa
    10441 atgaagaaga tgacgatgtg cacgcggcgg gtacggtttt ggttggcttt cagcagcgga
    10501 cgaatcatca gcattgctgc gccggtcgtt cccatgatag aggcaagtgc cgtaccgacg
    10561 gcaagcaggg cggtgttgag cttgggtgtg ccgttcaagt cgccccaaac caaaatgccg
    10621 cctgaaatgg tgtacagggc aagcagcagc aggatgaagg ggatgtattc ttcaacgagt
    10681 gcgtgtgcga cggtatggat accggcggac gcgccaaaaa ccaaactgaa cgggatgagg
    10741 aagagcaatg tccaaaaggc ggtgattttg ccgtaatggt gatgccaggt atgcgaaaaa
    10801 aacaagggac ccaatgcgat agacagcaaa atcagggcaa agggcaggct ccacagcagg
    10861 tttaggtttg cgccgtccaa atctgcggcg taaaccgatg cggggaaaag cattagtgaa
    10921 aacaggggta ggtggcgcat cgtgtttcct cgattcaagc actgccttgc gcggcgcgtg
    10981 ggagtgatac aggcaccgtg ccgcccggac ataggcggac tgtgctgcct gtttgttttt
    11041 gaaaaaagtt ttccgattga ttgtaaagta aataatcagg ataaaccagt ttcccaaacc
    11101 ggaaggcggc gggaaggcgg attgctgtgc ttgggaatat atgttctttt tgataaataa
    11161 ttttatttaa aacaaataaa tatatgtctt taataaataa tctatcgaaa acgaaaaatg
    11221 aatttatttt aacatatatt tgcaatgaaa caggtttgcc ccccgtttgt ttgcccttat
    11281 ccctttcagt acggcattca agattcgggc ctgcgccaca tccatatggc gacaagggaa
    11341 caaaaaaccg atgaaaccgc cccgacccac cagcgttggg gaaactgcca aaacattatc
    11401 aggcaggatg cggtcatcat actgatggcg aatattttgg ctttgcgcgg cactgcgccg
    11461 ttttgttccc agttatgaac catcggaccg aaatagcggt gccggtgcag ccagcggtga
    11521 aagcgcgggg atgcctttgc ccagcaggcg gcggagagca gtacgaacgg cgtggtcggc
    11581 aacagcggca aaaaaatgcc gatgataccc aacagcaggg aaatgcagcc gcaggcaatt
    11641 aaaagataac gtatcatttt gaaatatttt tcttattgtg cggataaggg caggatgtga
    11701 taccgagttt tgcccagcct tcatgtccca ttttttccag cagggcgata ttgcgttcga
    11761 atattgccga agtgtcggga aaggcttgtg cggctttggc aatgctgtct tcgcggatga
    11821 ggtgcagcgt cggataggga gaacggttgg tgtagttgcc gatgtcgtcg ggttcggtat
    11881 tctgaaagcg gaattgggga tggaacggtg cgatttggac gatgccttcc aagccgtttt
    11941 cgataacggc ggcatcggca atatcgagca tatcgttgaa tacgtcgaaa tcggggaata
    12001 gggtcgggtg aaccagcagg gtggtttcca gttcggtggc gggtgtattg cccagtcgct
    12061 gcagttcttc gtccaagtct tccaaaaaac tgtcaaggtg tttggcttcg ctgattgcga
    12121 tgcggacaag gtttttaacg tggggggctt tggcaaaggg acacaggttc agaccgatga
    12181 cggctttttc caaccattgt ccggtgtgtt cggcaacagc atctttattt tcggaagtat
    12241 tgatattcat tattgtcatg taaatgtgtt tgcagattgc acgtgcggga aaatcgggaa
    12301 gggcactatt ccttcagcag gtggttgagc ggcagggagg tggtgtgttt gatttctttt
    12361 aaaacaaagc tcgattgcgc atcttgtacg ccgtggtggg acaggagcgt atccaaaaca
    12421 aaatgggaaa acgcgttcat atcggtaaaa aacgcctgaa gcaggtagtc ggtttcccct
    12481 gtcagggcga agcagctcaa gacttcaggc cattttcgaa ccgatgcggc aaagtcttcc
    12541 cgcgcgtctt ttgctttgcg gatggaaacg cggataaatg cctgaagccc caggttgacg
    12601 gattccggag acagcagcgc ggcatattgg cggacgatgc cggcatcttc caactgcttc
    12661 agacggcgca ggcacggaga aggcgaaagt gcgacacgtt cggacagttc gacattggtc
    12721 agcctgccgt tttcctggag aacctgtaag attttaatat cggttttgtc taaagtgagt
    12781 tggggcatat ttgcgttccg ttttaaggaa ttcggattgt ctgtccgtat gtttgcggca
    12841 atccgcacag atggagacca tattaacata taaaaagtta taccgtcatc cgggacaaat
    12901 tttgttttcg gaaaatcatg tgaaaacaga ggcggtcggt ttgcatctct tttaagacgg
    12961 cttgcccaaa ccgccgattc aagacataat cgggaaatgt gcaggagagt gttacaccca
    13021 actacaatgt aaccaccgaa ggcgcagaca cccttaaatc gctcaggtat cagggactgc
    13081 acattgaaac aaacaatctg gagagcggcg ttggaataac gtccaccgaa ggggagaagg
    13141 ccgtctgaac caccattcag acaaccgcgc aaagcagtga gcagactggt ttgccatcat
    13201 gcggatacgg ccgaaaatct caggttcaag gacagatagg gtcatccgcg cattttgtgc
    13261 ggacggcatc tgaacaaaaa atccggagaa acttgagaat gattactctg aaaaccaccc
    13321 catttcatca agcccatcaa gatgcaggcg cgaagccggt agattttgcc ggctgggagc
    13381 tgcccatcca ttatggttcg caaatcgccg aacacgaagc cgtgcgcacc gacgccggta
    13441 tgtttgacgt atcccatatg cttgttaccg acgtagcagg cgcaaatgcc aaagcctttt
    13501 tccgcaaatt gattgccaac gatgtcgcca agctcgcttt tgtcggcaaa gccctttatt
    13561 ccgctttgct caacgacaac ggcggcgtga ttgacgactt aatcgtttac cgcaccaacg
    13621 aagccgaaac ccaataccgc atcgtgtcca acggagcgac tcgcgaaaaa gacacggcgc
    13681 aattccacaa agtcggacaa gagttcggcg ttgcctttaa tccgcgctac gacctcggca
    13741 tgctcgccgt acaaggccct aaagccatcg aaaaactcct gaccgtcaaa cctgaatggg
    13801 cggatgtgat tcacggcctc aaaccgttcc aaggtgcaga cttgggcaac gattggtttg
    13861 tcgcccgcac cggctatacc ggcgaagacg gcgtcgaagt gattctgccg ggcactgaag
    13921 ccgtcgcatt cttcaaagcc ctgcaagcag caggcgtaca accttgcggt ctcggcgcgc
    13981 gcgacaccct gcgcatggaa gccggcatga acctctacgg caacgatatg gacgacgata
    14041 ccagcccgct cgaagcaggc atgggttgga ccgttgattt gaaagacgaa agccgcgatt
    14101 ttgtcggcaa agctgccttg ttggcattga aagaaaaagg cgttgccgtc aaacaggtcg
    14161 gtttgctgct cggcaaaggc ggcatcctgc gcgcgcatat ggaagtgttg accgacaaag
    14221 gcaaaggcga aaccaccagc ggcgtattct cgcccagcct gaaacaatcc atcgccatcg
    14281 cccgcgtacc gaaagacttt gacggcgata ccgctaaagt gctgatgcgt ggcaaggaag
    14341 tggacgtgcg cgtattgaag ttgccgttcg tgcgtaacgg tcaaaaacag tttgattaat
    14401 atcggttcag acggcatttt catttcatat gccgtctgaa agcaggtttt aattgttgtc
    14461 cgatacggac gtttgtagaa agcattgaac aaggcatctg tggatattga ttcatgcaga
    14521 tgccgtctga aaataacccc tatcaatgga gtatcaaacc atgagcaaca acatcccggc
    14581 cgaactgaaa tacgttgcca gccatgaatg gctgcgcctt gaagaagacg gtacgattac
    14641 cgtcggcatt acccaccacg cgcaagagct gttgggcgac atcgtgttcg tcgagctgcc
    14701 cgaagtcggc gcgaaccttg ccgctgaaga gcaagccggt gtggttgagt ctgtaaaagc
    14761 cgcgtccgac gtgtacgcac cgattgcagg cgaagtcgtt gccgtcaacg aagatttgcc
    14821 aagtgctccg gaaactgcca acagcgattc ttacggcgca ggctggttct tcaaaatcaa
    14881 acctgtcaat cctgccgatt acgacggtct gctgactgcc gaacaatacg cgggcgaagt
    14941 ggattaaacc gcccggctgc ccgacggcaa ccgccggaca aacggaaact gcaccttcag
    15001 acggcatttt tgcggtcgga ggtgcagttt tttgtccgtg ttttaaggaa gcagttaggc
    15061 tataataacg gcctatattc atctttaccg attttttcat gcaacttacc gctgtcggac
    15121 tcaatcatca aaccgcacct ttaagcatac gggaaaagct ggcgtttgcc gcggcctgcc
    15181 tgcccgaagc cgtccgcaat cttgcccgaa gcaaggcggc aacggaggcg gtaatccttt
    15241 ctacctgcaa ccgcaccgag ctttactgtg taggcgattc ggaagaaatc atccgttggc
    15301 tcgcagacta tcacagcctt cccatagaag aaatcagccc ctacctttat actttgggga
    15361 tgcaggagac tgtgcgccat gccttccgcg ttgcctgcgg cttggattcg atggtgttgg
    15421 gcgagccgca gattttagga cagattaagg atgcggtcag ggttgctcaa gagcaggaaa
    15481 gtatgggtaa gaaactcaat gccctgttcc aaaaaacctt ttctgttgct aaagaggtcc
    15541 gtaccgatac tgccgtcggc gaaaactcgg tttccatggc ttccgcttcc gtcaaattgg
    15601 cggaacagat ttttcccgac atcggcgatt tgaatgtctt gtttatcggc gcaggcgaaa
    15661 tgattgagct ggttgccact tattttgccg ccaaaagtcc ccggctgatg acggttgcca
    15721 accggacgct ggcgcgtgca caggagttgt gcgacaagct cggtgtcaac gccgaaccgt
    15781 gcctgctgtc cgatctgcct gctattctgc acgattacga cgtggtggtt tcttcaacgg
    15841 cgagccagct tccgatagtc ggcaaaggca tggtcgaacg tgcattgaaa cagcgtcaga
    15901 gtatgccgtt gtttatgctt gatttggccg tgccgcgcga tattgaagcg gaagtcggcg
    15961 atttgaacga tgcctatctt tatacggtgg acgatatggt caacatcgtc caaagcggca
    16021 aggaggcaag gcagaaggcc gccgccgccg ccgaaacgct ggtatccgag aaggttgccg
    16081 aatttgtcag gcagcagcag ggcaggcaga gcgtcccctt gattaaagcc ttgcgggacg
    16141 agggcgagaa agcgcgcaag caggtgttgg aaaatgcgat gaaacagctt gccaaaggcg
    16201 caacggcaga agaggttttg gaacggctgt ccgtccaact gaccaacaag ctgctgcatt
    16261 cgccgaccca aactttgaat aaggcggggg aagaagataa agatttggtt catgccgtcg
    16321 cgcagattta tcatttggac aaataacggt gcgccgggaa aaatgccgtc tgaagaggtt
    16381 tcagacggca tttttttgtg ccgcctgaca acatcgtgaa atcccacatt atatcgatgt
    16441 aatcacaaag tatagtggat taacaaaaat caggacaagg cgacgaagcc gcagacagta
    16501 cagatagtac ggcaaggcga ggcaacgctg tactggttta aatttaatcc actatattat
    16561 cccgtatgcg gattggtttt aagatttgta aatttaattt gcatcaaaaa atcgccgata
    16621 gatgattcat ataatatcaa tattaaagag tatcggtata tcggggatag tcatgtcctg
    16681 tttttcaatc aaacgtatgt ccgcgtttcg ggcgcggata acggcgtttt ttgccgcctt
    16741 tgtctttttg acggcggcac tgcccgctta tgcggagcgt ctgcctgatt ttctggcgaa
    16801 aatacagcct tcggaaattt ttccgggtgc ggaccgttac ggcaagccgg aaggtaagcc
    16861 tatggttgcc cgcgtttaca aaggcgatga gcagttgggc ttggtctata tcacgaccga
    16921 tgcggtcaat acgcgcggtt attcgagcaa accgattgat acgctgatgg cgttggctaa
    16981 agacggtacg atagccggag cgaaattggt tgatcaccat gagtcgatta tgctgatcgg
    17041 tatcccgcat ttgcccgcgc ccgggcgggc gatacgctca aactggcttc cggcgtatat
    17101 caaaccaaac tttatatcga caaaccgatt acgattgaag ggcctgccga ccgttctgca
    17161 accatcgaag gggacaggag cgggcgtacc atagccgtac acgcgccgga cgtaacgctc
    17221 cgcaacctga ccgttacccg ttccggcatg agcctgccag caatggatgc cggtatttat
    17281 ctcgaagaaa ccgctccgca cgccctgatt gaacacaata atattttgga taattcggtc
    17341 ggcgtctatc tgcatggttc ttccgaagcg atggtgcgcg agaacaaaat cgtcggcgac
    17401 gcgactttgc gcgtgaacga gcgcggcaac ggcgttaccg tttggaacgc gcccggtgcg
    17461 caagtcgtcg gcaacgacat ttccaaaggg cgggacggca ttttttccaa caccagcaca
    17521 tataacacct acaaaaacaa ccgcttcagc gatttgcgtt tcgccgtcca ctatatgtac
    17581 accaacgaca gcgaaatcag cggcaatatt tccgtgggca acaatatggg ctatgtgctg
    17641 atgttttccg agcggctcaa agtattcgac aatatcgccg tcggcagccg cgatcagggc
    17701 attatgctca actatgtcaa ctattccgat attcacgaca acattatcaa caaagcgggc
    17761 aagtgcgtat ttgcctataa tgccaactac gataaacttt tcgccaatca ttttgaaaac
    17821 tgccaaatcg gcatacactt taccgccgcc atcgaaggca cgtccctgca cgacaattcc
    17881 ttcatcaaca acgaaagcca ggtcaaatac gtcagcacgc gctttctcga ctggagcgag
    17941 ggcggacacg gcaactattg gagcgacaac agcgcgttcg atttgaacgg cgacggcttc
    18001 ggcgacagcg cgtaccggcc caacggcatc atcgaccaaa tcatctggcg cgcgcccgta
    18061 tcgcgtctct tgatgaacag tcccgcaatc agcatcgtca aatgggcgca ggcgcagttt
    18121 cccgccgttc tgcctggcgg cgtggtggac agcaaaccgc tgatgaagcc ttatgccccc
    18181 aaaattcaaa cccgttatca ggcgatgaag gacgagttgc tcaaagaagc cgaaacgcgg
    18241 cagtcggaat ggggcagggc ggaaaacggg tctttgaact agtctgtttc agacggcatc
    18301 cggattcaaa tgccgtctga aaacacaaaa ggaacaacca tgaccacaca tcatgtcgaa
    18361 ttgaggaagg taaccaaacg gttcggggcg caaaaagccg ttaaccaagt cgatttggtt
    18421 ttgaaggcag gagaaagcgt cgggcttgcc ggacacaacg gcgcgggcaa gtccaccatt
    18481 atgaagctga tactcgggct gattaccccg accgaaggcg aagtgatgct tttgggcgaa
    18541 cgtaccggca gcaaagcggg ggcgcggctt cgcagccaaa tcggctacct gcccgaaact
    18601 gttgcgttgc acccttcgct gaccggcatc gaaacgctgg atttttatgc caaacttaaa
    18661 aaacagccgc tcacgcagaa tcgggggctg ctcgagcgcg tcggcatttc acaggcggca
    18721 caccgccgcg tcggcactta ttctaaaggg atgcgccaac gccttgcctt ggcacaagcc
    18781 ctgctgggcg agcccaaagt cctgctgttt gacgaaccga caaccggcct cgaccctgca
    18841 tcaaggcaaa tgttttacga agtcgtgcgc gaactcaacg ggcgcggcgc gaccgtattg
    18901 ctcagtaccc acgcccttgc cgagttggac gggcacgccg accgcattat cgtggattaa
    18961 atttaatcca ctatatgcgg gtatggcggg tttgagcgga caaatcagcc tgaccgtccc
    19021 cgttttgctg accgctcagg ttttatgggt tatcattccg cttgttttgg cagccggaat
    19081 ttttagaaag cgacaaatat gaaaaaaacc ctgttggcaa ttgttgccgt ttccgcctta
    19141 agtgcctgcc ggcaggcgga agagggatcg ccgcctttac cccggcagat tagcgaccgt
    19201 tcggtcggac actattgcag tatgaacctg accgaacaca acggccccaa agcccagatt
    19261 ttcttgaacg gcaaacccga tcagcccgtt tggttctcca ccatcaagca gatgttcggc
    19321 tataccaagc tgcccgaaga gcctaaaggc atccgcgtga tttacgttac cgatatgggc
    19381 aatgttaccg attggacgaa tcccaatgcc gacacggagt ggatggatgc gaaaaaagcc
    19441 ttttacgtca tcgacagcgg ctttatcggc ggtatgggtg cggaagacgc gctgccgttc
    19501 ggcaacaaag agcaggctga gaaatttgca aaggataaag gcggtaaggt tgtcggtttc
    19561 gacgatatgc ctgataccta tattttcaaa taatattgaa aaaaccggcc gaaactttaa
    19621 aaacgagttt cggtcggttt ttcttttctt gttcggtata gtgtcggcag gaaagaacct
    19681 tcacatcccg ccgtaattcg gcccgctcgc gccttcgggg caaatccaag tgatgttttg
    19741 cgtcgggtct ttgatatcgc aggttttgca gtgcacgcag tttgccgcgt tgatttgcag
    19801 gcgcggattg ccgttttctt caacaatttc gtacacgccg gccggacaat agcgcgtttc
    19861 gggcgaggcg tattctttgt agttcacgtc tatcatcgtt tgcggattgt tcagcaccaa
    19921 atggtcgggc tggttttctt cgtgcgcgag attggcaagg aagacgctgc tcaagcggtc
    19981 gaaggtcaac acgccgtcgg gtttcggata atcaatcggc ttgcacgcgg cggctttttt
    20041 gagctgctcg ttgtctttgc cgtgatgttt caaggtccac ggggctttgc ctctgaaaat
    20101 catctgatcg atgccggtgt agattgagcc gaggtaaacg ccccatttga atgacggacg
    20161 gacattgcgc gcggcgtaaa gctcttgata cagccagctt tgttcaaaac gttgctgata
    20221 atccgccgcc tctttgccgc tgtcgaagtt ttccacttct tcaaggtttt ccaacaaggg
    20281 gaacacggct tctgcggcga gcatggcgga tttcatcgcg gtatgaatgc ctttgatgcg
    20341 cggcatattg aggaagcctg ccgcgtcgcc gattaaaacg ccgcctttga acgagagctt
    20401 cggcaaactt tgcaaaccgc cttcaatcag cgaacgcgcg ccgtaagcga tgcggcggcc
    20461 gccttcaaag gttttgcgga tttcgggatg ggttttgaaa cgttggaact cttcaaacgg
    20521 cgacagataa gggttttgat agtccaaacc gaccacgaaa ccgacggcga ctttgttgtc
    20581 atcgaaatgg taaacaaacg cgccgccgta ggttttgctg tccagcggcc agcccgcgct
    20641 gtgcaccacc aagccgggct gatgtttttc agacggcact tcccaaattt ctttgatgcc
    20701 caagccgtaa gtttgcggct ggctgttttg gtcgagttgg aaacgttcga tgacttgttt
    20761 ggaaagcgaa ccgcgacaac cttcggcaaa cagagtttgc tgcgcccaaa gctccatgcc
    20821 gggctggaaa ctgtcggtcg gctcgccgtc tttgccaatg cccatattgc cggttgcaat
    20881 gcctttgacc gaaccgtctt cgtgatacag cacttcggcg gcggcaaagc ccggataaat
    20941 ttccacgccc aaattttccg cctgctccgc caaccagcgc acgacttcgc ccaagctgac
    21001 gatgtagttg ccgtgattgt cgaaatttgg ggtaataggc agattgaacg cttttttctc
    21061 agtcaggaac aacactttgt cctgcgttac cgtacgcgtc agcggcgcgc ctttttcttt
    21121 ccagtcggga atcaactcat tcagcgcaat cggatcgata accgcgcccg ccagcgaatg
    21181 tgcacccgcc tccgaacctt tctccaccac gcaaacgctg atttcgcgcc cattttgttc
    21241 ggcaagctgc ttgagtttga tggcggcgga caaacccgat gggcctgcgc cgacaatcac
    21301 gacatcgtat tgcatactgt cgcgggtgat ggattctgtc atggcggttc ctgtgtattt
    21361 attattgaat tgcaaatccg taattataca acgagaacat atagttacca aatacaacaa
    21421 aggtcgtctg aaaaccatat tttcggtttt cagacgacct ttgtcgaaat ttcaataagc
    21481 acgccaccat tttacctgtc cgaccgcaaa ctccgtctga cgtttcggac tgcgtgtgaa
    21541 aaacgcctta tccccgccgg catccctccc tttcggcaca accgccaaaa tcttacctgc
    21601 caaatttccc tcacgggttt gccaagcatc caaaaactgc gccctgc
//
LOCUS       DBBZXW010000022        20742 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.022, whole genome shotgun sequence.
ACCESSION   DBBZXW010000022 DBBZXW010000000
VERSION     DBBZXW010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20742
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.022"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            425..1243
                     /gene="opc"
                     /locus_tag="ACJJD2_000783"
                     /gene_synonym="opcA"
     CDS             425..1243
                     /gene="opc"
                     /locus_tag="ACJJD2_000783"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HGG7579357.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWSAKV
                     HADLLSQLGNGWYINPWSEVKFDLKSRYKLNTGVTSLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVPTKSGDVSLTIPKTSIREYGLRVGIKF"
     gene            1406..2050
                     /locus_tag="ACJJD2_000784"
     CDS             1406..2050
                     /locus_tag="ACJJD2_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG7579358.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            2069..3979
                     /locus_tag="ACJJD2_000785"
     CDS             2069..3979
                     /locus_tag="ACJJD2_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7579359.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGKIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENETVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILILDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     IFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            4000..4365
                     /locus_tag="ACJJD2_000786"
     CDS             4000..4365
                     /locus_tag="ACJJD2_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579360.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            4476..5951
                     /gene="trpE"
                     /locus_tag="ACJJD2_000787"
     CDS             4476..5951
                     /gene="trpE"
                     /locus_tag="ACJJD2_000787"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HGG7579361.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPASEWQETQNKARAVIHAAQMVQEGLDK"
     gene            5948..6494
                     /locus_tag="ACJJD2_000788"
                     /pseudo
     CDS             5948..6494
                     /locus_tag="ACJJD2_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
     gene            6491..7627
                     /locus_tag="ACJJD2_000789"
     CDS             6491..7627
                     /locus_tag="ACJJD2_000789"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HGG7579362.1"
                     /translation="MKNISLSPPATLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPNA
                     PAAEFADRHLCAPFNDQTALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHGGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTVDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            7674..8156
                     /locus_tag="ACJJD2_000790"
     CDS             7674..8156
                     /locus_tag="ACJJD2_000790"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7579363.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            8262..9317
                     /locus_tag="ACJJD2_000791"
     CDS             8262..9317
                     /locus_tag="ACJJD2_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7579364.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKATNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            9314..9511
                     /locus_tag="ACJJD2_000792"
     CDS             9314..9511
                     /locus_tag="ACJJD2_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579365.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGITFLNHPF"
     gene            10028..10633
                     /locus_tag="ACJJD2_000793"
     CDS             10028..10633
                     /locus_tag="ACJJD2_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HGG7579366.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKPPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
     gene            10696..11058
                     /gene="ssrA"
                     /locus_tag="ACJJD2_000794"
     tmRNA           10696..11058
                     /gene="ssrA"
                     /locus_tag="ACJJD2_000794"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(11377..11562)
                     /locus_tag="ACJJD2_000795"
                     /pseudo
     CDS             complement(11377..11562)
                     /locus_tag="ACJJD2_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(11578..12177)
                     /locus_tag="ACJJD2_000796"
                     /pseudo
     CDS             complement(11578..12177)
                     /locus_tag="ACJJD2_000796"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(12131..12541)
                     /locus_tag="ACJJD2_000797"
     CDS             complement(12131..12541)
                     /locus_tag="ACJJD2_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HGG7579367.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAKQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLKAEMAALKKLDALIYGKEVRQKERNSSQG"
     gene            complement(12538..12870)
                     /locus_tag="ACJJD2_000798"
                     /pseudo
     CDS             complement(12538..12870)
                     /locus_tag="ACJJD2_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217309.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12982..13485)
                     /locus_tag="ACJJD2_000799"
     CDS             complement(12982..13485)
                     /locus_tag="ACJJD2_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HGG7579368.1"
                     /translation="MSTKFNQFINRVLSHEGGYVSHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAVRMLQRAAG
                     VADDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLSTFTSFGKGWVRRVAQNLIH
                     ASADNTD"
     gene            complement(13589..14056)
                     /locus_tag="ACJJD2_000800"
     CDS             complement(13589..14056)
                     /locus_tag="ACJJD2_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579369.1"
                     /translation="MIGVAWYLGANIRFEEQWVLYEALRTTASIIFAVVGVWLAIVYP
                     ERLKSPFSQTFSSPVYRRGFKQLFSPVISSIFILSIVLLVGLLAPLLKHIEAIIQYIP
                     LCRKISFSLLASLTMWQIYTVLSVLVPLLNILSKNENDCHASNIINKLKGEQN"
     gene            complement(14085..15143)
                     /locus_tag="ACJJD2_000801"
     CDS             complement(14085..15143)
                     /locus_tag="ACJJD2_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579370.1"
                     /translation="MKNKLTLRYFKITRCGYWSGSSKEPNHYEDLLKTLTHLETYVKG
                     KTIEETGISRDDKEPSTFLLDICKKNGLWLLAFWNPAAESSSDEIVSLNMKSKLGQVD
                     SSPVTAGNGKTFGFVSYFLIWPEHNFYSTILSPNATLAGRTEFEEYMLNFLWIDPNFI
                     EKTTYEETSTDGIIHTMERTNFKLPLKINGTPVPRFAGKLAKSPSEKEYVISNYDQVT
                     QVHNQCTVKVTSGQSSSGILKKMLPSFFGSTELFAPLKTIRVNHSVSAAFENKSNLKD
                     WIEDWEKNSFDLDKDDCGFKLKNDDKIYWIRGNVIKCELDVNLHKENGIYPAAKILDI
                     IDQRKDYVLNEFKLSDDS"
     gene            complement(15284..15844)
                     /locus_tag="ACJJD2_000802"
     CDS             complement(15284..15844)
                     /locus_tag="ACJJD2_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579371.1"
                     /translation="MKILALLIAATCALSACGGQAEEQPASAQPQEQAQSELKTMPVS
                     YTDYQSVANKGLADQKTGLTLPEHVVPADNAEGKNLLHDFSDGLTLTVDTDKADKITA
                     VRVVWNTDAMPQKAEKLSKAAAALIAATAPGDRTLLRDTGDQIKMAIDSHNAQKEPTR
                     EWARGGIAYKVTVTNLPSVVLTAKAE"
     gene            complement(15868..16062)
                     /locus_tag="ACJJD2_000803"
     CDS             complement(15868..16062)
                     /locus_tag="ACJJD2_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7579372.1"
                     /translation="MNNYYLYRNCSSDVLWVKRIQRQIDGSLLLISDNSTYPPMPLAL
                     AEHPDIQIIGQVVQVSKDLN"
     gene            complement(16055..16687)
                     /locus_tag="ACJJD2_000804"
     CDS             complement(16055..16687)
                     /locus_tag="ACJJD2_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579373.1"
                     /translation="MDKMNQFELCQKEHVNPFALSKQYLLVVTFVKSSSKNFQAALLW
                     ARSAKLFENLEIGKETIYCCAFDKTAEQAGMAGVFLNYIENWNGKQIYINGRIHSGSI
                     YDLLGVLDCYQKSQSCPNPKSHCCFVSDDIFLWHGSRPTFEISLDLTGKKKETSSAKK
                     FVMPCINFRHHRIEKETYLGNWNEQIAALAVKQNIDWCPSFDIENFRQYE"
     gene            complement(16680..17162)
                     /locus_tag="ACJJD2_000805"
     CDS             complement(16680..17162)
                     /locus_tag="ACJJD2_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7579374.1"
                     /translation="MSFQSVHFFVLSRDDLGCLCFDVEIIGRILPILQGIFMNNSSFF
                     GNRLKEERKKLKMTQAEIAEKCGVSGRMWGDYERGISQPKAELFFQFEKVGIDVQYVM
                     HGRRGETAVMPSETLNAEEQELLALFREAAAADREMILMVARRAEKKAQTALGKVSNG
                     "
     gene            17323..17547
                     /locus_tag="ACJJD2_000806"
     CDS             17323..17547
                     /locus_tag="ACJJD2_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7579375.1"
                     /translation="MEKPLNFKPIPYPQTRESAAGWFKRNGVCKAHWAKYFNLERTTV
                     EHLLRGKLKGNFGKSHEAAVLLGMKEKSDD"
     gene            17540..17785
                     /locus_tag="ACJJD2_000807"
     CDS             17540..17785
                     /locus_tag="ACJJD2_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7579376.1"
                     /translation="MINHECINQPYGRILKFSRVQAKEMLTADELKENFAQNGQTLAQ
                     WARENGFKPRDVYLVIGGQRKGNYGKGYEIAKKLGLK"
     gene            17797..18087
                     /locus_tag="ACJJD2_000808"
     CDS             17797..18087
                     /locus_tag="ACJJD2_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7579377.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRRQHERLQSKIAEIGKRVNAD"
     gene            18133..19008
                     /locus_tag="ACJJD2_000809"
     CDS             18133..19008
                     /locus_tag="ACJJD2_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HGG7579378.1"
                     /translation="MSNEVEVMDAVSVQNYQVAHSVMVMEQWGNGEVYNEATWIERGR
                     LAVRQTMEGMFELGRALIVLKEHTEHGRFMEIVKGQFGIGHNETARLMSATQRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELTEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHEISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            19001..19345
                     /locus_tag="ACJJD2_000810"
                     /pseudo
     CDS             19001..19345
                     /locus_tag="ACJJD2_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            19320..19892
                     /locus_tag="ACJJD2_000811"
     CDS             19320..19892
                     /locus_tag="ACJJD2_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HGG7579379.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            20221..20502
                     /locus_tag="ACJJD2_000812"
     CDS             20221..20502
                     /locus_tag="ACJJD2_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579380.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            20514..20726
                     /locus_tag="ACJJD2_000813"
     CDS             20514..20726
                     /locus_tag="ACJJD2_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HGG7579381.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
BASE COUNT         5770 a         5466 c         4645 g         4861 t
ORIGIN      
        1 caaaaacaga aaaccaaaaa cagcaacctg aaattcgtca ttcccgcgca ggcgggaatc
       61 cagaccccca acgcggcagg aatctatcgg aaataaccga aaccggacga acctagattc
      121 ccgctttcgc gggaatgacg gcagagtggt ttcagttgct cccgataaat gccgccatct
      181 caagtctcgt cattccctta aaacagaaaa ccgaaatcag aaacctaaaa tttcgtcatt
      241 cccataaaaa acagaaaacc aagtgagaat aacaattcgt tgtaaacaaa taactatttg
      301 ttaattttta ttaatatatg taaaatcccc cccccgaaag cttaagaata taattgtaag
      361 cgtaacgatt atttacgtta tgttaccata tccgactaca atccaaattt tggagatttt
      421 aactatgaaa aaaacagttt ttacatgtgc catgattgcc ctgaccggta ctgccgccgc
      481 tgcacaagag cttcaaaccg ctaatgagtt taccgtccac accgacctct cttccatttc
      541 ttcaactcgt gctttcctga aagaaaaaca caaagctgcc aaacacatcg gcgtacgtgc
      601 tgatattcct tttgatgcca accaaggcat ccgcttggaa gccggtttcg ggcgcagcaa
      661 aaaaaatatt attaatttgg aaacagatga gaacaagctg ggtaagacta aaaatgtaaa
      721 actgcccacc ggcgttcctg aaaaccgtat cgatctttac acaggctaca cctacaccca
      781 aacgttaagt gattctttaa atttccgtgt gggtgccggc ttgggttttg aatcttcaaa
      841 agacagcatt aaaaccacca agcatacgct tcacagcagc cgtcagtcgt ggtcagccaa
      901 agttcacgcg gatttgcttt cccaactggg taacggctgg tatatcaacc cttggtctga
      961 agtgaaattt gacctcaagt cccgctataa attaaacacc ggcgttacca gtctcaaaaa
     1021 agacatcaat caaaaaacca acggctgggg ctttggattg ggtgcaaata ttggtaaaaa
     1081 actgggcgaa tccgccagca tcgaggcggg gccgttctac aaacaacgta cttacaaaga
     1141 atccggcgag tttagtgtac caaccaagag tggcgacgta tcgctcacca tcccgaaaac
     1201 cagtattcgt gaatacggct tgcgcgtcgg cataaaattc tgatgatttg aaatcatcat
     1261 tgtcgcttta aatgccaaac cgcaaactat tttggtttgc ggtttttacg tgaaatgaat
     1321 ttgaatagcc gatgccgtct gaaaatttca gacggcattt ttccaatcgg ttaaaatacg
     1381 cggtttgttt ttttaggaac gcgccgtgct tgcctccgcc atcgacttca tcctccatat
     1441 cgaccaacac ctgctcgcgc tgtcggcgca atacggtgtg tggatttatg cgattctgtt
     1501 tttgattgtt ttttgcgaaa ccggcctgat tgttacgccc ttactgcccg gcgattcgct
     1561 gctgtttgcg gccggcggta ttgccgcgct gggcggtatg gatattcatt tgatggttgc
     1621 attattaagc cttgccgcca tactcggcga cgcgctcaat tttaccgtcg gcaaatattt
     1681 cggcggcagg ctgttcgcca atcccgattc taaaatcttc cgacgcgaat atctcgataa
     1741 aacccaccgt ttttacgaaa aacacggcgg caaaacgatt atcatcgcgc gcttcgtgcc
     1801 catcgtccgc accttcgccc cctttgtcgc cggtatgggg aaaatgcact atgccaaatt
     1861 tatccgctac aacatcatcg gtggcttgtt gtgggttatc ctgttttctt acgcgggcta
     1921 tttctttgcc aacttccccg tcgtaaaaaa caatctgggc ttggtgatgg gcggcatcat
     1981 tattgtttcc gtcctgccgg gtgcggttga aattgcccgc gccaaacttg cggtaaaatc
     2041 caaacggtaa ctgttgagaa tttgtatcat gaatatatta tctgtagaaa acgcttcttt
     2101 tgccatcggc cacgttgcct tgctcgacaa aacttctttt caactcgaca gcggcgaaaa
     2161 agtcggcttg atcggacgca acggcgcagg caagtcttcg tttttaaaaa tcctcgccgg
     2221 cgtgcaaaag ctcgacgacg ggcagattat tgttcaaaac aacctcaaaa tcgtttatgt
     2281 accgcaggaa tccttttttg ataaggacgc aaccgtattt gataccgttg ccgaaggttt
     2341 gggtaaaatt cgcgatttat tgcgccgtta ccaccgcgtc ggtcatgagt tggaaaacgg
     2401 ttcgggtgag gctttgttga aagaactcaa cgaattacaa cttgaaatcg aagcgaagga
     2461 cggctggaag ctggatgcgg cagtcaagca gactttgggc gaactcggtt tgccggaaaa
     2521 cgaaaaaatc ggcaaccttt ccggcggtca gaaaaagcgt gtcgccttgg cgcaggcttg
     2581 ggtgcagaag cccgacgtat tgctgctgga cgaaccgacc aaccatttgg atattgacgc
     2641 gattatctgg ttggaaaacc tgctcaaggc gtttgaaggc agcttggtcg tgattaccca
     2701 cgaccgccgt tttttggata atatcgctac gcggattgtc gaacttgacc gcggcattct
     2761 acgttcctat cccggctcgt tctctaaata cagtgagaaa aaagcgcaag agttggcagt
     2821 cgaggcggaa cataaccgct tgtttgacaa atttcatgct caggaagaag cgtggatacg
     2881 caaaggcatc gaagcgcgac gtacccgtaa cgaaggacgc gtgcgccgtt tggaagagct
     2941 gcgccgccaa cgtgcagaac gccgcaacgt gcagggacag gtcaacttta agctcgatag
     3001 cggtgagaaa agcggcaaaa tcatcgccga attggaacac gcttcgtttg cctatggcgg
     3061 caaagtcatt atggacaaat tctccgccat cttgcagcgt ggcgacaaaa tcggcttaat
     3121 cggcccaaac ggtatcggca aaaccacctt cctcaagctg attttgggcg aattgcagcc
     3181 gacctacggc agaatccgta tcggcagcaa gcaggaagtc gcctatttcg accagttccg
     3241 cagcgcgttg aatgaaaacg aaaccgtgtt ttacacgctc ggacagggca atgattacgt
     3301 tgaagtcggc ggtaagaaaa agcatgtgat gagctattta gaagatttcc tgttcccccc
     3361 tgcccgcgcg caaagtcctg tttcttcact ctctggcggc gaacgcaacc gccttttgct
     3421 ggcaaaactc tttacccgtc ctgctaatat tttgattttg gacgaaccga ccaacgactt
     3481 ggatatcgat acccaagagc tgcttgaaga tttgctgcgc gattatcaag gcacggtatt
     3541 ccttgtctca cacgaccgta tgttcctcga taacgtgatt acccaaagca ttatttttga
     3601 aggaaatgga aggttaaaag aatatatcgg cggctatcag gactacatcg acgcaaaatc
     3661 acgcgaagcg aagattcaga cggaatccgc acccaaaaca gccgatgccg aaccggtgaa
     3721 agaaaaaccc aaagccaacc gcacggtcaa actgtcctac aaagaacagc gcgaactcga
     3781 cgccctgccc gacgaaatcg ccgccttgga agccgaacag gcagaaatca acgcgcagct
     3841 ttccgatccc gaaatcttca aagattacga aaaagccggc gcactgcaaa gccgcgccga
     3901 agaaatcgaa atgctgcttt tggaaaagct ggaacgctgg gagctgctgg aaaccaaaca
     3961 gaacggcaat gccgtctgaa atcaaacagg aagaaaaaaa tgttcaaacg acctgaagaa
     4021 atcattgtcc tgatacttgc cgtcctctgg attgccggta cgtattttct cgccgccctg
     4081 tttggagcgg atgcttatac cgtgttaaaa atcactgccc ttaccctgct ttggtctgcc
     4141 gcatcattcc tcctttggca aaaaaacctc agccggcata tctggccgct gctgctcggc
     4201 tgcctgactg cctgttggtg gccgtatctg aatcaatcgg tcgcacccgg ttctttacct
     4261 tggtatgcat catggacgtt caaaaccatc ttagccctga ttcccgtaac cgcaggttat
     4321 ctgtttaaat ggaaacaata ccggcagcgc aaaacaaagc cgtaagcccg tccttttcag
     4381 acggcatctc cggtcagact gtcaacaatt ccgataaaat gctatactcg cgcccgttgc
     4441 cgcgccgtcc gaaaccgccc tttgggaaag cagaaatgat cagcaaacaa gaataccaag
     4501 cccaagccgc ccaaggctac aaccgcatcc cgctcgtgca agaactcctt gccgatttgg
     4561 atacgccgct ttccctctat ctcaaactcg ccaaccgccc ctatacctac ctgctcgaat
     4621 ccgttgtcgg tggcgaacgt ttcggccgct attcttttat cggcctgcct tgcagccact
     4681 atctcaaagc cagcggcaaa cacgtcgatg tttatcaaaa cggcgaaatt gtcgagcaac
     4741 acgacggcaa ccccctgccc tttatcgaag ccttccacaa ccgcttcaaa acacccgaaa
     4801 tcccaagcct gccgcgcttt accggcggac tggtcggcta cttcggttac gaaaccatct
     4861 acaattttga acacttcgcc caccgcctga aaaacaccac caaagccgac ccgctcggca
     4921 cgcccgacat cttgctgatg ctgtcgcaag aattggcggt gatcgacaat ttgagcggca
     4981 aaatccatct cgtcgtttac gccgatccgt cgcagcccga cggctacgaa cgcgcccgcg
     5041 aacgcctcga agacatccgc acccagttgc gccaaagctg cgccatcccg ctctcgctcg
     5101 gcagcaaaca caccgaagcc gtcagcgaat tcggcgaaga gccgttcaaa gcctgcgtta
     5161 acaaaatcaa agactacatc ttcgcaggcg actgcatgca ggttgtcccc agccagcgca
     5221 tgagcatgga attcaccgac agcccgctcg ccctctaccg cgccctgcgt acgctcaacc
     5281 cttcgcctta tctcttttac tacgatttcg gcgatttcca catcgtcggc tcctcgcccg
     5341 aaatcctcgt ccgacgcgaa cgcaacgacg ttatcgtccg ccccatcgcc ggcacgcgcc
     5401 tgcgcggcaa aacccccgcc gaagaccttg ccaacgaaca agatttgtta agcgatgcca
     5461 aagaaatcgc cgaacacgtc atgttgattg acttaggacg caacgacgtc ggccgcatca
     5521 gtaaaaccgg cgaagtcaaa gttaccgaca aaatggtgat tgaaaaatac tcccatgtaa
     5581 tgcacatcgt ttccaacgtc gaaggccgtc tgaaagacgg catgaccaac atggacatcc
     5641 tcgccgctac cttccctgcc ggcacactct ccggcgcacc caaagtccgc gccatggaaa
     5701 tcatcgaaga agtcgaaccg agcaaacgcg gcatctacgg cggtgccgtc ggcgtatggg
     5761 gtttcaacaa cgacatggat ttggcaatcg ccatccgcac cgccgtagta aaaaacaaca
     5821 cgctatacgt ccaaagcggc gcgggcgtgg ttgccgactc cgatccggcc tccgaatggc
     5881 aggaaacaca aaacaaagcc cgagccgtca tacacgccgc gcaaatggta caggaagggt
     5941 tggataaatg acttatgaaa aactttatga gcttcgccaa acactcagac cgactaccaa
     6001 agacggtctc tatacagata atgaaaaaaa tcgagaaatc ctaacggtta gatggagcgg
     6061 caacacagaa aatcctaaaa atttctcagc tgtcgctata ggaattaatc caagtaaagc
     6121 aaatgatgaa agaagcgaca aaacccttac ccaacttgca cgtttcttgg atatgtacgg
     6181 ttttaccaac ttcaaaatgt taaatatttt ttccagttac tctacacagc aaacaggaat
     6241 taggacaaac acccaaaccg atttttccaa atttaaagga tgtttggaag atgctgatat
     6301 gattattctt gcatggggta cagaccgcgg tgcttataag gatgaaaaaa aacagaatac
     6361 tggaatttct aaaagcagaa aaatttatgg aaaaagtatt ctgtatttct gaaactggta
     6421 attccagcga tacaagacat ccgtcaagaa ttagttatag ctatcaactt gtacaatttg
     6481 aagagtcagc atgaaaaaca tatctctttc tccgcccgcc acgctcggaa tcctcggcgg
     6541 cggacaatta ggcagaatgt ttaccgttgc cgccaaaacc atgggctaca aagtaaccgt
     6601 actcgacccc gatccgaacg ctccggcggc ggaatttgcc gaccgccatt tgtgcgcgcc
     6661 gtttaacgac cagaccgcgt tggacgagtt ggcaaaatgc gcggcggtta cgaccgaatt
     6721 tgaaaacgtc aatgccgacg cgatgcgttt tctggcaaaa cataccaacg tttcccccag
     6781 cggcgactgc gttgccatcg cgcaaaaccg cattcaggaa aaggcatgga tacgcaaagc
     6841 aggtctgcaa accgcgccgt atcaagcagt ttgcaaagcc gaagacatca ctgaagcaag
     6901 cgcgcaattc ctgcccggta ttctgaaaac ggccactttg ggctacgacg gcaaaggtca
     6961 aatccgcgtc aaaacggtgg acgaactcaa agccgcgttt gccgaacacg gcggcgtgga
     7021 ttgcgttttg gaaaaaatgg tggatttgcg cggcgaaatt tccgttatcg tatgccgtct
     7081 gaacaatgac aacgtgcaaa ctttcgatcc tgccgaaaac attcacgaaa acggtatcct
     7141 cgcctactcc atcgtcccag cccgactgag tgccgacatt cagcaacagg cgcgacaaat
     7201 ggcgcagcgt ttggccgatg aattgaacta cgtcggcgta ttggcggtag aaatgtttgt
     7261 tgtcggcgac acgcatgaat tggtcgtcaa cgaaatcgcg ccgcgtccgc acaattccgg
     7321 ccaccatacc gtcgacgcct gcgcggcaga ccaattccag caacaggtcc gcctgatgtg
     7381 caacctgcca cctgctgaca ccaaattgct gagttcttgc tgtatggcga atattttggg
     7441 cgacgtttgg caggaagacg gcggcgaacc ggattggttt cccctgcaaa gccggccgga
     7501 cgcgcacctg cacctttacg gcaaaaaaac cgcgcacaaa gggcggaaaa tgggacactt
     7561 taccgtttta accaccgatt cggacaccgc atttcaagaa gcaaaaaaac tgcatcagtc
     7621 cctataatcc gaccaacggc acagatgccg tctgaagccg ccgacatact gccatgaacc
     7681 tgctgacact gttacgcccc gccaccgtgc aagactgcaa agacatcttc aaagtccacc
     7741 tgcactccgt ccaatacacc tgcatcctca gctacaacga acacgcccta aaagtatggg
     7801 aaggcttgtt aaacacagaa agctacctgc cgaccatttc cgatcccgac aaagcacttt
     7861 gggttgccga atacaaaggc aacatacagg gatttttcca aatcgactgc caagaagcac
     7921 aactcgatgc actttacgtc caccccctgt tccacaacct cggactgggc actgccctgc
     7981 ttcatcaggc ggaaaccatc gcccacaaat ctggtttgag ctttctgaaa ctctacgcat
     8041 cgctcaactc cgtcccgttt taccttctca accgctacga atcgctcggt tcggcagtat
     8101 tgcagcttga ccccagcatc aaaatcaaat gcgaactgat gcggaaacac ctctgatccg
     8161 tccttataac caaaactgat aatcttcaaa tcaaacatta tttccacaag cgcagacagc
     8221 cgtataaagt tgccccatct accaaccgac aggacaagca tatgaaaacc tacgcaccgg
     8281 cactctatac cgcagccctg ctcaccgcct gcagccccgc agccgattca aaccatccgt
     8341 ccggacaaaa tgccccggcc aataccgaat ccgacggaaa aaacattacc ctgctcaacg
     8401 cctcatacga tgtggcacgg gatttttaca aagaatacaa ccccttattt atcaaaacat
     8461 accaatccga acaccccggc acatccgtca gcatccaaca gtcccacggc ggctccagca
     8521 aacaggcatt atccgtagcc aacggccttc aagccgatgt cgtaaccatg aaccaatcct
     8581 ccgacatcga cctgctcgaa aaaaaaggac tggtagaaaa aggctggcaa caagccctcc
     8641 ccgaccacgc cgcgccctac accagcacta tggttttcct tgtccgaaaa aacaacccca
     8701 aacagatccg cgattggaac gaccttgcca aagacggcgt taacatcgtc atcgccaatc
     8761 ccaaaacctc gggcaacgga cgctacgcct tcctcggcgc atacggttac ggtctgaaag
     8821 ccaccaacgg caacgaacag gaagcccaaa aactcgtcgc atccatcctc aaaaacaccc
     8881 ccgtttttga aaacggcgga cgcgccgcca ccaccacctt cacacaacgc aacatcggcg
     8941 acgtactcat tacttttgaa aacgaagcca actacgtcag caaaaaactg acccaaggac
     9001 agtttgaaat cgtctatccg agctacacca tttccgccga aagccccgtc gccgtcgtca
     9061 acagcgtcgt cgcgaaaaaa ggcacgcaaa aaaccgcccg cgcctatctc gaataccttt
     9121 ggagcgaacc ggcgcaagaa ctcgccgcct cactctacct gcgcccccgc aaccccgaag
     9181 tattggcaag acacaaagcc gacttcccag acttagacac cttctctccc gaagaaaaat
     9241 tcggcggatg ggacaacatc atgaaaacct acttcgctga cggcggcata ttcgaccgcc
     9301 tgaccgcaca aaaatgaccg ctatgccgtc tgaaccgcct ttcagacggc attccacaca
     9361 tcaaaacaga aaaaccgcgc ccaaaatcat catcacaaga cacaacggca aaccggatac
     9421 aaaacccaac accgccgcca aaatgccgtc tgaagccgtc ggcgcaacca tccttatctg
     9481 gggcataact ttccttaacc atcccttttg acagccaaat aaacagtgct tttgcctgtc
     9541 agaaacaaaa ccaatatttt gcagttcgta tcggaacatt tatagtggat taacaaaaac
     9601 cagtacagcg ttctcgcctt agctcaaaga gaacgattct ctaaggtgct gaagcaccaa
     9661 gtgaatcggt tccgtactat ctgtactgtc tgcggcttcg tcgccttgtc ctgatttttg
     9721 ttaatccact ataaaacatc agatttccgt gtttcgcgtt tccggcaatt caagattggc
     9781 aaaacacgtc agcctgcttc gcaaggcagg tttttaaaac tttatcaggc gttcgggcat
     9841 atcggttcga ccggtccgca tttccggcaa tcaacactgc cgacggttgc cgcatttctt
     9901 tttgatatac aatcacactt tcaaaaaaca tacgcaggca acaaaatcat cctcccccga
     9961 ttggcaaaca ttccggcaaa ttaaaacccc gcccgaaaca gccatcggac aaataacagg
    10021 aaaaaatatg aataccgact tccaaaacat cctcaaacaa ctgggcaaac aagcccaaaa
    10081 agaagcggca gaaaaacagg cagccgaaaa aaacaagcaa aaacaagaac aggatttcga
    10141 tttttcacaa gcagtcggac aagtctcccc attaaaaaac cggcagcaat attatgcgcc
    10201 gcccgacaaa ccccccatca aagtccgtcc caaagacaac cgcgccgacg aagaaaacta
    10261 cttctacatc ggcagcacat acaacgaccc gcccgccagc ttcagcaaaa acggacaggg
    10321 aaaaaacgac atccaacgcc tgaaaaacgg atactatccc gtcgttaccg atgtcgacct
    10381 gcacggctac acacaggaag aagcccaaaa agtcctcaac gaattcatcg cattcaccca
    10441 aaaacgcggc gtatgcggcg aaatcatcca cggcagcgga ttaggttcca aaggctacaa
    10501 acccgttctg aaaaatatga cccgaaactg gctgatgcaa caccccgacg tactcgccta
    10561 cgccgaaccc cgggaaggca acgacggctg cgtccgcatc ctgctcaaac gcaaattaag
    10621 gcagcaagac tgacaaattt ctccgacaga cttggcagca ccgcacaata tccgtataat
    10681 ttgcaaacca tttctggggg cgaccttggt ttcgacgggg gttgcgaagc agatgcgggc
    10741 ataccggggt ctcagattcc cgtaaaacac tgaattcaaa tagtcgcaaa cgacgaaact
    10801 tacgctttag ccgcttaagg ctagccgttg cagcagtcgg tcaatgggct gtgtggcgaa
    10861 agccaccgca acgtcatctt acattgactg gtttcctacc gggttacttg gcaggaaatg
    10921 agatttaagg taactggttt ccaaaaggcc tgttggtcgg catgatggaa ataagatttt
    10981 caaatagaca caactaagta tgtagaacgc tttgtagagg actttcggac gggggttcga
    11041 ttccccccgc ctccaccata ccctattttc agcagcatcc tgcaacacaa aaaagccttg
    11101 aacttcaaca gtttcaaggc ttttttgttg ccttgaatat gctggcgtat gcttgagttt
    11161 tcgccattta tggggtaact tttggggtaa cttttcacga attaccccaa aaaacgcctt
    11221 aaaaatgcaa aagtcatcac gcattttttt aaaaaggtta cccaaaactt aaatgtaatc
    11281 ctttatttat aagcttgcag ctttccaaac aagttacccc caaacggata aaaaaatgcc
    11341 gaagccgaac tgaccccaaa aagtcggaca gtttaatcaa gcggctttca gggactgaat
    11401 tctgtactga acaaggctca gcccttttaa tttcaacttg attctatcgt tgttgtatag
    11461 tggattaaat ttaaaccagt acggcgttgc ctcgccttgc cgtactattt gtactgtctg
    11521 cggcttcatc gccttgtcct gatttaaatt taatccacta taaaaaaaca tctgatattg
    11581 ccaaccttga tccgaatgca gtatcggctt ttcagacgat cccggtttct ccggcgcacc
    11641 tttcagtatc tcgtcggcca aatcgaaagt cgggcgggtt tgaatacggt aactgacgat
    11701 ttccccgtta aacaaatcca taatcggaga aaggtatatc ttttctccgc ctacattgaa
    11761 ctcggtaacg tccgttaccc atttctcatt cggcttttct gcatggaaac agcgtcgcag
    11821 gatattcggc gcaattttgc cgacttctcc tttgaacgag cggtatttgc gccgccgtat
    11881 cactgccttc agccccgtct tcgccatcag acggctgact ttcttgtgat tgaccggtgt
    11941 tcctgcgtga cggatggctg ccgcaatcct ccggtagccg tatcttccct tatgtcgtcg
    12001 ataaatatca tggatatgcc gtttcaaatc ggcatatttg tcttctgccg attggacggc
    12061 caattggtaa tagaaggtgc cgcgtggcag tccgacaatc accaacagca gttcaacgga
    12121 tggcattgcc ttaaccctgc gacgagttgc gttctttctg ccgcacttct ttcccataga
    12181 ttaaggcatc gagctttttt agggcagcca tttccgcttt aaggcaagcc aattccgcaa
    12241 gcagttcttc cttggttttc agatagccgg cttttttcgt ttgcggcgga tactgttttt
    12301 tcacgggctt tcttccttgt ttttgggaaa agtcgtacca ccgctgcctt tcgtcctgcg
    12361 cttttttaag ctgcaaggcg tattgttccg ccgcaaccat agaagaatgc cgataggtgg
    12421 caatcagggc ggtttgtttc gcttcggcct tgtcggcggc gtatcggtaa ccgcacgtcc
    12481 acacaagcaa aagcacaaat gcccaaagca gccgtttttt ggctcggaca aattcaatca
    12541 ttgccgcccc ccttcctgat ttgcggattt tttgatttct gccaactgcg gaatcgccgc
    12601 gatgccgcgt ttgattaatg catacccgcc gaccaatgcg ccataagccc actagagcca
    12661 ttcgggcgcg tccgccgcct gcacgaactt ccaagtcatg gcggctgcgg cgacgtttgc
    12721 ccatagtttg gtatggctga tttttcctgt ggccggatta gagaccaagc cgcccagcca
    12781 tcggaaaaag gcggttattt gtgacgcttt tttttggctg cgcgtttcgc ggcggctacc
    12841 ccgctcttgc ggtgggcttg cgtccaacat ccctgagtcg gcatggcgta gcgaatgcct
    12901 aggtcgctgt ggctgaaatc gggctgcatg gctgcggtca ttagggcgat gagtgacttt
    12961 tttgacatgg tttatctccc tttaatcagt gttatctgca gacgcgtgaa tcaggttttg
    13021 cgccacacgg cgtacccagc ccttgccgaa agaggtgaac gtactgagct tggtataaaa
    13081 gaccagacgc tcggcgttga accgcaataa aaggtcgttt tcggggaggg aattgatggc
    13141 tttgaggctg atttcgccga tgattccatc gtccgccacg cctgcggcgc gttgcagcat
    13201 acggacggca ttgccgtaac cgtggttgac gcaggcatca aaaaattgga acgcgaccgc
    13261 ttccggcatt tggtcggcgc ggtaacgctc ccaaaacgcc tttcggtaaa tgccgatagc
    13321 ctgttcacgc gtcatggcac gcatggagcc gttgtagccg tttgcctggg cggtgcgctt
    13381 agtgatgccc caattggttt cgccgccggg gtctttggga tggctgacgt aaccgccctc
    13441 gtgggagaga acgcggttga tgaattggtt gaatttggtg gacataaaaa atccctgtat
    13501 ctattgatag gtacagggat tttaggaggt attaaaagag tggcctttta atacgagtta
    13561 aaagcagttt acactaaaaa tcacatagct aattctgttc accctttagc ttgttaataa
    13621 tgttggatgc atgacagtca ttttcatttt tacttaaaat atttaacaaa ggcactaata
    13681 cagataaaac cgtataaatt tgccacatcg tcaagcttgc taacaggcta aatgagattt
    13741 tccgacaaag tgggatatat tgaattattg cctcaatatg tttgagcaaa ggagccaaca
    13801 aaccaacaag taacacaata cttaaaataa aaatggaact tataacaggg gaaaaaagct
    13861 gtttgaatcc acgccgatat accggagagg agaaagtttg actaaaaggg ctttttaatc
    13921 gttcgggata gacaatagcc aaccaaaccc caacaactgc aaaaataatt gatgcagttg
    13981 ttctcaaggc ttcatacaat acccattgct cttcaaatcg gatattagca cctaaatacc
    14041 aggctacacc aatcatgaat gcagagcata ttaggaaaat atttctaaga atcatcactt
    14101 aatttgaatt cgtttaaaac gtaatctttc ctttggtcta ttatatctag aattttagca
    14161 gctggataaa tcccattttc cttatgaagg ttgacgtcta attcacattt gatgacattt
    14221 cctcgaatcc aataaatctt gtcatcgttt tttaacttaa agccacaatc atctttatct
    14281 aaatcaaaag aatttttttc ccagtcttca atccaatcct taagatttga tttgttttca
    14341 aatgcagcag aaacagaatg atttacacga atggttttta atggagcaaa caattctgtt
    14401 gaaccaaaaa agcttggtaa cattttcttc aaaattccac ttgaactttg tccagaggta
    14461 acctttaccg tgcattgatt atgcacttgg gttacttggt cataattact aatgacatac
    14521 tctttttctg aaggagattt agctagtttc cccgcaaaac gtggcacagg agttccatta
    14581 attttaagag gcaatttaaa attagttcgc tccatggtat gaattattcc gtctgttgaa
    14641 gtttcttcgt aggtagtctt ttctataaaa ttaggatcaa tccacaagaa attaagcatg
    14701 tactcttcaa actctgttcg tccagctaaa gttgcattag gagaaagaat cgttgagtaa
    14761 aaattatgtt ctggccaaat aagaaaataa ctaacgaagc caaaagtttt cccatttcct
    14821 gctgttactg ggctagaatc aacttgacct agtttacttt tcatgtttaa agaaacaatt
    14881 tcatctgaag agctttctgc ggcaggattc caaaaagcaa gcaaccacag accatttttt
    14941 ttgcagatat cgagcaagaa agtgcttggc tctttatcat cacgactaat tccagtctct
    15001 tcaatagttt tacctttaac atatgtctct aaatgagtta aagtttttaa taagtcctca
    15061 taatgattag gttcttttga agaaccagac caataaccgc aacgagttat tttgaaataa
    15121 cgtaaagtca gtttattttt catattctct ctaatatatt aaaaatagat agctatccta
    15181 actatccgaa accttttcag acagcttttt tatcagttat ttattctcag caggctctat
    15241 aaacatcatc tccgtctgct cctaattgtg gctgtaatgc aggttattca gcttttgctg
    15301 tcaaaaccac gctcggcaaa ttagtaacag tgactttata agcaatccca ccacgcgccc
    15361 attctcgggt tggctctttt tgcgcattat ggctgtcaat tgccattttg atttggtcgc
    15421 cggtatcacg cagcagtgtg cggtctcccg gggcggttgc cgcaatcaag gctgcggcag
    15481 ctttggacag tttttccgct ttttgaggca ttgcatctgt attccagact actcggacag
    15541 cagtaatttt gtcggcttta tcggtatcaa cggttaatgt gaggccgtct gaaaagtcat
    15601 gcagcagatt cttcccttcc gcattgtcgg caggaacaac atgttctgga agggtcagac
    15661 cagttttttg gtcggcaagc cctttattgg ctactgattg atagtcggta tagcttaccg
    15721 gcatggtttt taattcggat tgtgcctgct cttgaggttg ggcagatgcc ggttgttctt
    15781 cagcttggcc gccacacgca gataaagcac aggtagcggc aattaataaa gcgagtattt
    15841 tcattctatt tccctttttg attgtgtcta gttcaagtct tttgatacct gcactacctg
    15901 cccgatgatt tgaatatcgg ggtgttccgc cagtgccaag ggcatgggtg gataggttga
    15961 attgtcagaa atcaagagta ggctgccgtc gatttggcgt tggatacgtt tgacccataa
    16021 cacatcgctg ctgcaattcc tatatagata gtaattattc atactgtcta aaattctcaa
    16081 tatcaaaact tggacaccaa tctatatttt gttttactgc caatgcggca atttgttcat
    16141 tccaatttcc taagtaggtt tctttttcaa tcctatggtg acggaaatta atacaaggca
    16201 tcacaaattt ctttgcagag gatgtttctt ttttctttcc agttagatca agactgattt
    16261 caaacgttgg tcttgatcca tgccatagaa aaatgtcgtc tgaaacaaag caacagtggc
    16321 ttttagggtt gggacaggac tgtgattttt gatagcagtc taaaacccct aacaaatcat
    16381 aaatactgcc actatggatt cggccattga tgtaaatctg tttgccattc caattttcaa
    16441 tataattcaa aaataccccg gccatcccag cctgttctgc tgttttatcg aaagcgcagc
    16501 aatagatggt ttcttttcca atctcaagat tctcaaataa tttggcactt cttgcccaaa
    16561 gtaatgctgc ctgaaaattt ttactgctgg atttgacgaa tgttacaacc aatagatatt
    16621 gctttgacaa ggcaaatgga ttgacatgtt ctttttggca caattcgaat tgattcattt
    16681 tatccattac tcactttacc aagcgcagtt tgggcttttt tctctgccct gcgcgcaacc
    16741 atcagaatca tttcacggtc ggcagctgcc gcctcgcgga acagggcaag cagttcttgt
    16801 tcttcggcgt tcagggtttc agacggcatg accgctgttt cgccgcgtct gccgtgcatg
    16861 acgtattgaa cgtctatacc caccttttca aattggaaga aaagttccgc ttttggctgg
    16921 ctgatgccac gttcataatc cccccacatt cttcctgaaa ccccacattt ttcagcgatt
    16981 tcagcttgag tcatttttaa tttttttctt tcttctttca atcggttgcc aaaaaaggaa
    17041 gagttattca taaatattcc ttgcaaaata ggaagaattc ttcctataat ttccacatcg
    17101 aaacacaaac accctaaatc atcacgagaa aggacgaaaa aatgaacact ttgaaagctc
    17161 atgcgcgaca gctcatgatg gatcacatac acccagctac gagaaaaagc ttgtttactt
    17221 taaaacaagc caagaccctg ctgctgcaca acagaccgga tgtttatcgt gcaaagagac
    17281 ctaaaaacaa acacattata tcacacgaaa ggcataaata atatggaaaa acctttgaat
    17341 ttcaagccta ttccctatcc gcaaacgcgc gagagcgcgg ccgggtggtt taagcgcaac
    17401 ggggtgtgca aggcgcattg ggcgaaatat ttcaatctag agcgcaccac ggtggagcac
    17461 ctcttgcgcg gcaagctgaa aggcaatttt ggcaaaagcc acgaagcggc ggttttgctg
    17521 gggatgaagg agaaaagcga tgattaatca tgagtgtatt aaccaaccgt acggacggat
    17581 actgaaattt tcccgcgtac aggccaaaga aatgcttacg gcagacgaat tgaaagaaaa
    17641 ttttgcccaa aacggccaga cgctggcgca gtgggcaaga gagaacggct ttaagccgcg
    17701 cgatgtgtat ctagtgatcg gcggacagcg caaaggcaat tacggcaagg ggtacgaaat
    17761 tgccaagaag ctgggactga aataaggagg atgcggatgg cagaaagtaa aagggtacaa
    17821 cggctattga gggtctttat cgcgcttgac gaacatccga ttatcggtct gagcaataag
    17881 gatttatcgg tcggactggg gctgacgcca tcacaagtca gcagggatat tgatgatttg
    17941 gttgcatcgg gattggtcat caagcttgaa aacggcaact acgcctacgg tatcaaaacc
    18001 ctgcaaatcg ccgagcggtt caggcggcag catgaacggc tgcaaagcaa gattgccgaa
    18061 atcggcaagc gggtgaatgc agattaacga attttgaaat ttcctgacgt aaggaaattt
    18121 ggagagtgaa aaatgagcaa tgaagttgaa gtgatggatg cggtttcagt gcaaaactac
    18181 caagtcgcgc acagcgtgat ggtgatggag caatggggta acggcgaggt ttacaacgaa
    18241 gccacttgga tcgaacgcgg ccgcttggcg gtacggcaga cgatggaagg catgtttgaa
    18301 ttggggcgcg cacttattgt actgaaagag catacagaac acgggcgatt tatggaaatt
    18361 gtaaaaggtc aatttggtat cggccataac gaaaccgccc gattgatgtc tgctacccaa
    18421 cgtttcgcca cgccgcaaat gcagaaagcc gcgccgaagc tgatggattt gggcaagtca
    18481 aagctgctgg aactcttggt cgaagaagac gttacgttgg tgggacttgc cgaaggagaa
    18541 gaagtcaacg gcatgacctt tgacgatgtg gaccgaatga cggtgcgcga gctgcgcgtc
    18601 gccctgcgcg aaagccgtga aaacctcgcc gccaaagacg aagtgatgaa aaccaaaaca
    18661 gccaaaattg atgagctgac cgagaagctg gctaagaagc aaaccgttgt cagagagccg
    18721 aaggcggaag acgtgggcag tgagttggcg atgcagttaa caagccttga ggtcggtatc
    18781 cgcagtcaag tgagccgttt gaaagatttg ttcgaccaac ttaatgcgca cagtgaggca
    18841 cacgagatca gccatcaggc aaagatggtc ggcacgctca atcaaattat tttggactgc
    18901 gagcaactgc gcgaaagcta tgccctgccg actgaagcac cgacagacaa tgtgccggaa
    18961 tggttgggcg gtgaaacggg agaaggcgat gaatccggca atgattgagc gtcttaaggc
    19021 agtcgagaat caggcggaag caatggaacg cggcgcacgc tctgcatatc ttaagcagca
    19081 ggcgcaggaa ttgggcatca gccttgccac gctataccgc aagctggagg cggtcagcgt
    19141 caagccgacg cgcaaacggc gcagcgatgc gggcaagacg gagcttaaac cggaagaagc
    19201 caaattgatt tcggcggttt tggtggaggc gatgaggcgc aacggcaagc ggttgatgtc
    19261 ggtgcggcag gcggtggaaa tgctgcgcgc caacggaaaa atcgaggcgg cgcggattga
    19321 tggggaaacc ggggaagtca tcccgtccct ccgcactgct ttccgcccgc tggcaagaca
    19381 tcgacctcac cgcccggtta tggcacatcc ccgccgccga catgaagacc aaacacccct
    19441 ttaccgtccc actgtcggac tgggcggtag aaatactccg agagctgcac acacagaccg
    19501 gcgacaacat ccaccttttc cccggcatcc gcccacggcg caaacccgcc ccccatcccg
    19561 accacatcag catcaaattc gcccacaacg ccatccgacg actgggctat gacggcagca
    19621 cccccggcaa atccaaacac acaatgcacg gattccgcca cctcttcacc aacatcagcc
    19681 tgaccgccgg aaaagacacc ctcacaacag acctcgccct cggccacatc agccgcgccg
    19741 ccctccaacg cgccggcttc tcaagcctgc accactacct gaccgccgac agctaccgcc
    19801 tccaagagcg gcgcgaactc gccgaatggt acagccgccg ccaccgccaa gcatacgaag
    19861 ccgccgccca aaacacttgc aataaaacct aaaaggtatc aatatataca catggcagac
    19921 atcctaccat ccgacaagcg gcggcaaccg ccaaaaacga aaggaagtac gatgaacata
    19981 atcgaacaag aaatgaaaca ctccagtctg agaaaagtag atgccgaaat cgccaaaatc
    20041 attgcagacg cgcacaaaat caacgccgaa tccgtaaaat agcccaagaa tcccgatggt
    20101 atcccatgat ggcggccacc gggctggtta ccgccatcgc cgccgtgttg gcactgatat
    20161 tcaaatttgc ctgaccacaa gccccgcgag gggctttatc ccccgaacaa cccgaacaaa
    20221 atgaacagag ccgcactatt caaccgctac cccgaatgga ttatcgggca agacggcgca
    20281 agccgtttca ttacccattg ccgctatccc cgcctgattg ccaaaatcca caggcagaca
    20341 gacggcgaat gcccgggcgg gcattaccgc cattccgaaa acggcatcac cctttacgat
    20401 tttatttttt tcgacggcaa accggcagac gaagcccgat ttgccgccgt ccttaccgaa
    20461 acctgccgca gggcagtcaa aaaaatatgc gaaacaaaat aaaccgcaac gacatggaac
    20521 tcggctacac gccttacaac cttcgcaccc ttcgcaaccg ctgcaaactg acacaggccg
    20581 agttggcgca aatcgtcggg gtgaagcact acatacaggt aggccgctgg gaagccgaac
    20641 ccgataccga aacccgtcgg gccgatatgc cgctggaaaa atggcggcag ttcctcgatt
    20701 ggatagaaaa aacaaacgcc gtctgaaacc ttcagagtgc ga
//
LOCUS       DBBZXW010000023        20687 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.023, whole genome shotgun sequence.
ACCESSION   DBBZXW010000023 DBBZXW010000000
VERSION     DBBZXW010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20687
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.023"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(63..239)
                     /locus_tag="ACJJD2_000814"
     CDS             complement(63..239)
                     /locus_tag="ACJJD2_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579382.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVSAR"
     gene            complement(242..1600)
                     /gene="murF"
                     /locus_tag="ACJJD2_000815"
     CDS             complement(242..1600)
                     /gene="murF"
                     /locus_tag="ACJJD2_000815"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HGG7579383.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1725..3371)
                     /locus_tag="ACJJD2_000816"
     CDS             complement(1725..3371)
                     /locus_tag="ACJJD2_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HGG7579384.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVPGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(3394..4872)
                     /locus_tag="ACJJD2_000817"
     CDS             complement(3394..4872)
                     /locus_tag="ACJJD2_000817"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HGG7579385.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELAGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIEAVFQTPWGEGKCHTRLLGRFNAQNLAACVALLCANGYPLDKVLDVLEKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4897..6642)
                     /locus_tag="ACJJD2_000818"
     CDS             complement(4897..6642)
                     /locus_tag="ACJJD2_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HGG7579386.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="ACJJD2_000819"
     CDS             complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="ACJJD2_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HGG7579387.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="ACJJD2_000820"
     CDS             complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="ACJJD2_000820"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HGG7579388.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PEPPLKIAGRALKPGEAEIAANPRARSAVLRVAERTAGPIPEQSQRKTSEWQ"
     gene            complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="ACJJD2_000821"
     CDS             complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="ACJJD2_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HGG7579389.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8707..9897
                     /locus_tag="ACJJD2_000822"
     CDS             8707..9897
                     /locus_tag="ACJJD2_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7579390.1"
                     /translation="MSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLIAEKIGKHGN
                     WIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLARQLQELLSQT
                     AGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQARAPEASQKVV
                     HLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTYSARPLHDLQ
                     LSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQYYHPQRN
                     QGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQSHFLLNL
                     GITELLAQVGKTDSPAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVDWAGFRFGDI
                     CHKL"
     gene            10029..10105
                     /locus_tag="ACJJD2_000823"
     tRNA            10029..10105
                     /locus_tag="ACJJD2_000823"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10063..10065,aa:Met,seq:cat)
     gene            10113..10188
                     /locus_tag="ACJJD2_000824"
     tRNA            10113..10188
                     /locus_tag="ACJJD2_000824"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10146..10148,aa:Ala,seq:ggc)
     gene            complement(10479..11300)
                     /locus_tag="ACJJD2_000825"
     CDS             complement(10479..11300)
                     /locus_tag="ACJJD2_000825"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HGG7579391.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEHLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11333..11977)
                     /locus_tag="ACJJD2_000826"
     CDS             complement(11333..11977)
                     /locus_tag="ACJJD2_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7579392.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="ACJJD2_000827"
     CDS             complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="ACJJD2_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HGG7579393.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAATEAEQSDAEKAADKADEVEEK
                     AGEPEREEPDGQAVRKKVLTEEREQTVREKAQKKDAETVKKQAVKPSKETEKKAPKEE
                     KKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTSDKAEATHYLQMGAYADRR
                     SAEGQRVKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHEVASLIR
                     SIESK"
     gene            complement(12931..14427)
                     /locus_tag="ACJJD2_000828"
     CDS             complement(12931..14427)
                     /locus_tag="ACJJD2_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HGG7579394.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLVQTDCQVPQMPSENTKLLDLVDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSVSVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14441..14761)
                     /locus_tag="ACJJD2_000829"
     CDS             complement(14441..14761)
                     /locus_tag="ACJJD2_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HGG7579395.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15244..16770
                     /gene="putP"
                     /locus_tag="ACJJD2_000830"
     CDS             15244..16770
                     /gene="putP"
                     /locus_tag="ACJJD2_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HGG7579396.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWI
                     KKPAQAAGESGLLTMYEIVPGFIVCLIIAVLVSLFNKEPSREIQKRFEKADADYRAAR
                     "
     gene            complement(16860..17027)
                     /locus_tag="ACJJD2_000831"
     CDS             complement(16860..17027)
                     /locus_tag="ACJJD2_000831"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579397.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            17019..20624
                     /gene="putA"
                     /locus_tag="ACJJD2_000832"
     CDS             17019..20624
                     /gene="putA"
                     /locus_tag="ACJJD2_000832"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HGG7579398.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDRLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSKKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDNVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRAGEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWIHG
                     GSTVQAFAALTELAASGIQAVVEPDSPLASYTADLEGLLLVNGKPETAGISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4852 a         5961 c         5051 g         4823 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagagacttt cccaatcacg caaatcgggt aactccccgg atttttgccg
      121 ccacccaagt ctaaacataa atcttcataa agatacgcct gcgtctgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcaacaat aaggctttaa aaaaacgtcg acttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gagcatacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcaccc agttcgccca tatcgcccat cacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatgctgtc agggttcgca ttataagtat
      601 cgtcaatcag ggttgcgccc ttgattccgg atttgacgtt cagacggcct ttgatattgc
      661 tgaagccttt caaaccttcc gccacatcgt tcaaactcaa acctgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgacca atgcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatac ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccagcatc tccttcaccg
     1261 tcgtcttgcc gaccgaaccg gtaatgccga acacaaacgg attcacattt tcacgccaca
     1321 cctttgccaa cgtttgcaat gcggcaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt tttttatcgc ctgttttgct gtggtaaaac
     1681 acagattatt ttcccattct cattcggcat tttttctgta cgtatcattt tttagacgta
     1741 tttttagtcg atttgccttt tcccgcatac cacggcgcgg ggtcgtcggg cagtccgtcg
     1801 ataaaggcaa ggttattgcc ttcgcccggc acatcgggaa cattccccca aaaatcatag
     1861 ccgtcatcgg gcaactcgtc ggtttcgata cccgtccaac tgccgaatcc gcgtaaaaaa
     1921 ttaaacgcgc tgcgcctcac tttaatcatt tcgcgccgcg tgtcatcgga cgaaatttta
     1981 accagcggca cgccgtagct ttgacgcttc cacgcaccat gtgtcaacgt tcgctcgccg
     2041 cctttaccga catgcatcaa accgtggtcg gaaaagtaaa ccaaagacca gctttcttta
     2101 ttttcattca atatcttaac tgtatcttct aaaaatttat cggtttgcgc gatggtggaa
     2161 acatagcagg atattttttc agtttgatac tgaaaccgcc gcgcatcctt atccaaacgt
     2221 gtgcaaaaat cactgtgcga acccatcagg tgcatcacaa tcagccgagg cttcgtgcct
     2281 gcatttccta tcaaaacccg tttgaacgcc ggcaacaaaa ggcggtcgct caaccccgcg
     2341 cttttgccat aatcacccct ttgggtaaac cacggataat cgctgcgtag ggcataggtg
     2401 gaaatttcgt tggcaaaatg ccccaacatt ccttgattag acagccacgc cgtccgaaaa
     2461 cccgcctgct tcgccaagct gacgatgtta ttgttcggtt ctcccggcag ccccaaagtc
     2521 tgcggcagcg aaagattcgt cgcgtgggcg gtcgattggt aaccgtttat caacagccct
     2581 ttggtctgac tcaaaaaagg cgtatcgggc aatgggaaac cgtaaacatt catataatcc
     2641 gaacgcgcgc tctcaccgat aaccacaaca taatttttat acttgggcgc aacatgacgg
     2701 atatgccatg ttgacgcttt ttttgctgct tccaaaatgt gggcgcgctt ggcggcatat
     2761 tgtgccggcg cggaagccaa atcgtaatac aggtcgaaaa tattcaacaa caggccggca
     2821 tcaggttctc gcaaatcttt atcgctggcg attttatcca tcaccgcgca ggacaaaatc
     2881 aaagtcaata atatagtcag ccatattttg ctgcggcgtt tatagttttt tacgtcagca
     2941 aatacccccc ccgatacaca atatctccaa actgtcaagc caaaaatgaa aaataatgcc
     3001 tgcacaaaat aaagcgaccc gggaagattg ccgacaaatt cacgcgcctc ggcaggattg
     3061 ctttccaata tcgaaccgac tatctgataa gacggcgcac catacagcca gccgaccggc
     3121 aaatataggg cggttgtgcc gacgtaaatc agtaaaacaa ctgaagaaac gcgcgggaaa
     3181 ccgcgtgcca ataataataa aaatacaacc gaagccaaag cacccacggc agaataacgg
     3241 tagccgtatt catattccaa gtgataacct gatgcgatgg ccgcgccaaa acaaaaggct
     3301 aaaagcgcgc aaatgcccaa tgtatttttt aatgtctgat ccatattttt tattcgggcg
     3361 gattgtttca tacgatgccg tccgaatatc ccattattta cgagttaaca aagcctgtcc
     3421 gacgatttca agatcggaaa aacggtgctt cacgccttgt acatcctgat agttttcatg
     3481 ccctttgccg gcaatcagga tgatgtcgtt tgcggcggct tgttcaaccg cataacggat
     3541 ggcggcggca cggtcggctt cgacgcattc gggcgcggga acggcaggca ggatgtcgtt
     3601 gatgatgtcg tgcggatttt ccaagcgcgg gttgtcgctg gtgacgacga ctttatccgc
     3661 gccctgtacg gctgccgcgc ccatcagcgg gcgtttgccg cgatcgcggt taccgccgca
     3721 accgaatacg caccacaaag ccgcaccctg cggtttgatt tcctgcaagg tggcgagtgc
     3781 tttttccaat gcgtcgggcg tgtgggcata atcgacaaca accaaaggtt tgccgctgtt
     3841 cataatacaa tccatacggc ctgaagcagg acggattttt tccagtacat ccaatacctt
     3901 atccagcgga tagccgttgg cgcaaagcaa agcgacacag gcggcgagat tttgcgcgtt
     3961 gaaccgtccg agcaggcgcg tgtggcattt cccttcgccc cacggggttt ggaatacggc
     4021 ttctatgccg tctgaagagg cggtaaagtc ggtaatgcgg atgtcggcgt gttcgctgaa
     4081 gccgtaactg taaacggcca aatcggggca gtcttttttc agacgacctg cgagttccgc
     4141 gccgtattcg tcatctacat tgataacggc gtgtttcaag ccgtgccagt aaaacaggcg
     4201 cgacttgatg gcaccgtagg cttccatcgt gccgtggtag tcgaggtggt cgcgggtgag
     4261 gttggtaaag attgcgctgc ggaatgacac gccgttgacg cgcgactggt caagcccgtg
     4321 gctggagact tccatcgcgg cgactgttgc gccttgttga cggaaacggt agagcagggt
     4381 ttggacatcg acgggggcgg gtgtggtatg cgtggtttct tccaatgcac cccaaaagcc
     4441 gttgccgacc gtgccgacaa tggcggtttt ttcgcccaac aaatcggcag cttgcgccag
     4501 ccattgcgtg atggaggttt tgccgttggt tccggttacg ccccagactt tgagaccgtc
     4561 tgaaacgttg ccgtaaactt gcgccgccaa tatgccggca cggtgtttca aatctttgat
     4621 gccttgattg gggactttcc attcgggatt ccacgcgaat ttgccatcgt cgtcccaaaa
     4681 aacaaaagcc gcaccgttgg caacggcggc ggggatataa ctgcgtccgt cggcatattc
     4741 gcccggacag gcaacgaaaa tatcgccttg tttgatttgg cggctgtctg aatgcaacaa
     4801 acgccctgcc gcgtttgcac acgacagggt cgggatgccg gtttcagcca aaggggttaa
     4861 cttgctgaac ataaaacaat ctcgttgata ctcggattaa gacggtgttt tgacggctgc
     4921 ggcggtcagt ggcttggtcg gggaaatgcc caagatgttc aggctgccgc ccataatttt
     4981 tttgaagggc ggccctgcca ctacgccgcc gtaataaccg tgggcagtcg gttcgtcaat
     5041 ggttaccgcc acaatcacac gggggttttt ggcgggggca aaaccgataa aggtagcgat
     5101 gtgtttgttg tcggcataac gcccgttgac gaacttgcgc gccgtgccgg ttttcgcgcc
     5161 gacatcgaaa ccgtccaccg cacccgccgt accggtgccg cccggctcgg tcacggaaac
     5221 catcagattg cgtacctcgc gcgcggtcga ttctttgaat atgcgtttgc cttgcggcgc
     5281 aaccgcctgt ttttcaaagc tgaccggcag caaaacgccg tcgtgcgtca gtgcggtata
     5341 ggcgcgcgcc aattgcagca ggctcaattg caggccgtaa ccgaaagaca tcgtcgcctg
     5401 ttcgatgggc cgccacctgc gccaatttct caacaaacct gcagtttcgc ccggaaagcc
     5461 cgagtgcata cgcacaccga tgcccaactc atgatagaag tcatacattt cttcggcacc
     5521 gaaacgcgca gacagtttgc ttgtgccgac gttggacgat ttctgcatga tgccgcgcac
     5581 atccaaagag gggtaaacat gggtatcgcg cacgggagac ggtccgattt tataaggctg
     5641 cgtattcagc cgttcgttca aatcggtttt gcccgcatcc aatgctttcg caatcacaaa
     5701 cggtttgatt gccgaaccgg gttcgatcat atcggttacg gcacggttgc gccgctgttc
     5761 gctgtctgcc cggccgggcc tgttgggatc gtaggcgggc gtattggcca aggcgaggat
     5821 ttcccccgtg cgggcatcca aaaccaccac cgttccggct tttgcctgat ggtattcgac
     5881 cgccttgttc aactcttcat aggccaaggt ctgaatcctc tgatcgaggg aaaggatgat
     5941 gtctttgccg tttttcgggg ctttattgcg cggggagtcc aagctgtcca caatattgcc
     6001 ctgccggtcc cgcaaaacga cttccgcgcc gtcttcgcca tgcaggctgt cttcaagcga
     6061 aagttccaaa ccttcctgac ctttgccgtc aatatcggta aatccgatga cgtgtgcaaa
     6121 caggttgccc atcgggtaat ggcgttttaa ttctttttca aatacaaagt tttccaaacc
     6181 caaggctttg acctcttcgg caaccttggg atcgagctgc cgcttaatcc agataaacga
     6241 cttgcctttc tgttcgagct tgttcctcaa aacatcaacc ggcacatcga caagctcgga
     6301 caggcgttcc aattgtgcgg cagacggcat ttccttcatc tctttaggca cggcaaacag
     6361 ggactccgtc ggcgcactca acgccaaaac cgcaccgttc cggtccgaaa ccgtaccgcg
     6421 tgtagccggc aatgtttgag tccgcacaat ccggttgtcg ccctgttctt tcaaaaagtt
     6481 atacgttacc gtctgcagat acagtccgcg ggcaatcaga ccggcaaaca agaccgctat
     6541 tgccatcagg acgaagctga tccgtccgtt actggtcatc ggctttttga cctgctcttc
     6601 tttgggcagc atccggggct tatattcact cttaatcaac atttttactt ctcgttatta
     6661 ttatcctgac gcaggaatcc gattccggca cacaggctgc ttctatcttt gatgcgccac
     6721 cataaaggta ttgcccgaaa ccggcggatg gaggttttgt ttttctgccg ccgccctgat
     6781 cgcttcgtgg ttcgccaaac gcgcctgttg cagcctcatt tgcgcataat cctgctccaa
     6841 ggcgatttcc tgttttttcg ccttatccaa agctgtgaag ttgagcctgt actggttttg
     6901 ctgcatcaca acggaaaaag cggaaacgca caccgcaagc agcagaagga aattcaattt
     6961 gttcattgcc attcagacgt ttttctctgt gattgttccg gtatcggacc ggcagtccgc
     7021 tccgccacac gcaaaaccgc acttctcgcc ctcggattgg cggcaatttc cgcctcaccc
     7081 ggctttaatg ccctgcccgc gattttcagg ggcggctcgg gcaaatccgc ttccctgacc
     7141 gccgcccagc gcggcagggg cgcgtgttgc gaatattttt tgacaaactg cttcacaatg
     7201 cggtcttcca acgaatggaa agcaatgacc gccaaacgtc cgccctcttt cagacgacac
     7261 atgacctgcg gcaatactgc ccctacttct tcaagctcgc ggttaataaa gatgcggatt
     7321 gcctggaagg tgcgcgtcgc aggatcctgc ccccgctcgc gagtacggac gttttgtgcc
     7381 acgatctgcg ccagcttgcg ggttgtatcg attggacttt ccgcccgttg cgcaacaatg
     7441 gcgcgcgcaa tctggcggct aaaccgctct tcaccataat tcttgattac ctcgtgcaaa
     7501 tcctgttccg acgcaaccgc tatccactct gcggcagaca taccgcgcgt cgtatccata
     7561 cgcatatcca aaggggcatc gaaacggaag ctgaaaccgc ggctgccgtc atcgatttgc
     7621 ggggacgaaa tccccaaatc aaacagcgca ccgtccacct tgccgatacc caaaccgtcc
     7681 aatgccgtct gaaacgaagc aaaaccgcca tgcacgacac cgacccgttt gtccgaacgc
     7741 gccagctctt ctgccacagc aatcgcctgc ggatctttgt cgaaaacaat caaccgcccc
     7801 gcatcgccca aacgcgacaa aatcagccgg gaatgccctc ccctgccgaa cgtaccgtcc
     7861 acatagacac cgtcttcgcg cacggcaagc gcatccaccg cctcattcag caagaccgtg
     7921 atatgccggt aactttctgc tccactcaca attgcaaatc cgtctgaccc aactggaagg
     7981 caagttcgtc aggatcgtca tccaaagcct gaaccatctc agcctcccac tgctcgcgac
     8041 cccaaagctc caaacggttg gcacgaccga ccaaaacgac ttcacggtcg aaatccaccc
     8101 ttttcctcag tccggcagga agcagcaccc ggccggcgct gtcccattcc aaaatttccg
     8161 cgttatgcag caaaagattt tgaaaccgcc gcaaaacagg gttatccgcc acttttaagt
     8221 ttaaaagttg cgccgcaacc ttttcccact ccgcaacagg gtacatcaac agcttgtgtt
     8281 tcgactcgag cgttaccact acggcaggcg tatagaggcg cgacagaatg tcacggaatt
     8341 tggcaggaac agccaaccgc cccttactgt cgatgcttaa ttcgtgtgcg ccgccgaaca
     8401 tgacatgtcc caagccgaaa tcaaaatcac aagggtaaaa gagacacttt gccccacaat
     8461 tccccaccaa tcgacactat aagaaatttt aaacactcgg tcaaatcagg gcatgaaaac
     8521 tcattaacat atctgaaatt tttattcctt ttaaaaacaa taagataaaa aatgacgaca
     8581 acggcacggc gggtgcggta cagaataatc gaaccaataa acaactatat atgattaatt
     8641 taataatata aacacaatat atagtattaa gataaagcca tgacagcacc cgtaccaacg
     8701 tgtaatatgt cgggaaatcc aataaattta cacaagctaa cacttatcat gcccctccct
     8761 ctcccctctc ccgaagcacg gcaattctcg ctcaaactgc aaaccctcat tgccgaaaaa
     8821 atcggcaaac acggcaactg gattccattt tcacgtttta tggaattggt tttatacgct
     8881 ccgcaatacg gctactacac cggcggcagc cataaaatcg gcaataccgg ggattttatt
     8941 accgcaccga ccctcacctc tctgtttgca cagacactgg cacgccaact tcaagaactt
     9001 ctatcccaaa cggcgggcaa tatctatgaa ttcggcgcgg gaaccggaca gcttgccgcc
     9061 gatttgttgg gcagcatttc ggacggcatc agccgttact atattattga aatatcgccg
     9121 gagctggcag cacgtcagaa aaacctgatt caagcacgcg caccggaagc atctcaaaaa
     9181 gttgtccact tgaccgcact tcccgaagcg tttgacggca tcatcatcgg caacgaagta
     9241 ctcgatgcca tgcctgtcga aatcgtccgt aaaaatgaag gcggctcatt cgagcatgtc
     9301 ggcgtttgcc tagataatga ccgttttacc tattcggcac gaccgctgca cgacttacag
     9361 ctatctgcct tggcttccct ctattttcct caaacagatt atccctacac cagcgaacta
     9421 catccgcaac aatatgcctt tatccgcacc cttgcctcaa ggcttgaacg cggaggtatg
     9481 atattcatcg actacggttt tgatgcagcg cagtattacc accctcaacg caatcaaggt
     9541 actctgatcg gacactaccg acatcacgtt atccacaatc cttttgactt catcgggttg
     9601 gccgacctga ccgcgcatgt caactttacc gacattgccc aagccggtac ggatgcagga
     9661 ctggatttga caggctatct gccccagtcc cattttctgc tgaatctggg cataaccgaa
     9721 ctgttggcac aagtgggaaa aacagactcg cccgcctaca tccgtgaagc tgctgccgtt
     9781 cagaaactga ttgaccagca tgaaatggga gaattgttta aagtcatcgc attcggtaaa
     9841 aatatcggcg tcgactgggc aggattccgc ttcggcgaca tctgccacaa actctaaccc
     9901 tcatgccgcc tgaatccgct tcagacgaca taaacttttt aacatttaaa aacagtcaac
     9961 taattcaaaa ttaaaaaata cggcttgtca aaaaaacaga aaaacatata atagtgtctt
    10021 cacgaaacgg cgaattagct cagtcggtta gagcagagga atcataatcc ttgtgtccgg
    10081 ggttcgaatc cctgattcgc caccaaattt tcgggggtat agctcagttg gtagagcgct
    10141 tgcatggcat gcaagaggtc agcggttcga tcccgcttac ctccaccaga taaaaaagca
    10201 cagaccgtaa aaaggtatgt gcttttttat tacctgattg ccgggaaata aagaacaaac
    10261 cactgccttc aaaacaggca atcgacttta aacctatcgc cccgcctgtc ctgattttat
    10321 agtgaattaa atttaaaccg gtacagcgtt ggctcgcctt gccgtactat ctgtactgtc
    10381 tgcggcttcg tcgccttgtc ctgatttttg ttaattcact atatcagccc gccagacaaa
    10441 cccgacccga ataatgtctt caggtcgggt ttatggtttc attcccaact tatccagccc
    10501 gacaaccaca atattatgat gacgatgccg aaaacaatgc ggtaataggc aaacgggata
    10561 tagtttttct tggaaacaaa cttcagcagt gctttgaccg ctactaaacc ggaaacaaaa
    10621 gcggcaataa agcctatcag aatcaaaccg acatcatgca gggtgaaaaa ccggtaatgt
    10681 ttcaggacat cataagccgt tgcggcaacc atcatcggaa cggccaagaa aaatgaaaac
    10741 tccgttgccg ttttccgctc gattccccaa agcatcccgc ccataatcgt actacccgaa
    10801 cgggacgtac ccggaaccag tgcaaacact tgggcaacgc cgatcatcaa cgcatcaatc
    10861 ggacgcaatg catcaacatc ggcaatttta ggctctgccc ggctttggcg tttctccacc
    10921 cacaaaataa aaaaaccgcc caaaaccagc atgaccgcca cactcaaagg attgaacaga
    10981 tgttctttaa tctgtttgcc gaacaacagc cccatcacgg cggcaggtat aaaagcaatg
    11041 gcaagattga ggacgaagcg gttggctttc cggtcttttc ccacgccatg caacacattg
    11101 ctgaaacgct gccggtattc aaacactacc gccaaaactg caccgagctg gatggcaatt
    11161 tcaaaaacct tgtgattgct gtgaaaatca atcagattgc cgaacacaat caaatgtccg
    11221 gtgctggaaa tcggtaaaaa ttcggtaaaa ccttctacca agcccatcat cagggctttc
    11281 aggacaatca gaaaatccat tgcttgcgct tctttcggat acgggagttc ggctatttct
    11341 gtacagcagg ggtctgacgc ttgcgttctt ccctgacttt ggcaaccaat tctttaatcg
    11401 tatgaacgcc gccgtcaaag ccattattga agataacgcg gtattttccg ccgacaataa
    11461 cggtcggcgt gctgtcaata ccatattgtt ccgtcagttt ctgcattttt aatgcggcgg
    11521 cggcagcttc gggggaatca taggcgcgca tcagtttttt gccgtcaaag cctttttgag
    11581 acaaagccca ttttccggca acagccctgt tttccaagcg gattttttgt tcgtaaactg
    11641 ctttaaacac agcagggttt gcctgatatt tcaaacccga caaattgacg gcagccgcca
    11701 tcctggccag accgagcatt tcaggctgcc agaccacgtg ctccgtcctc aaataggcat
    11761 cagacggcaa tgccttgccc aatttcaata acaaaggatc gaaatgatgg caatgtacgc
    11821 agaaatagcc gaaaaattcc aaaacctcaa ttttacccga ctgttcttga ggaatgggtt
    11881 tatccaacac aagatagtct tccccttccg tcagggcata tgcctgcgcg gacaacactg
    11941 ccgacagcag cagcggcaac agatgtttga gcttcataat tatttgcttt cgatagaacg
    12001 gatcaggctg gcgacttcat gttttttcaa ctcgtcctgc atttttttca ccgcatcggc
    12061 agacatattg ccgctttgca cccggtaaag cgttttatgt cccgcctgat aaccgaccac
    12121 cttggaagat atgcccaaga ttgccagttt gacacgctgc ccttccgcgc tccggcggtc
    12181 ggcatacgcg cccatttgca gataatgcgt tgcttccgcc ttgtcggacg ttttcatttt
    12241 ctgcacttct ttggcggcgg cactgcgcgc tttttcgatg ctgccgctgt tgaggatttg
    12301 ttccggggtc ggtttgggtg caactttttc cttttccgcc tttttctctt cttttggagc
    12361 ttttttctct gtttctttag acggttttac cgcttgtttt ttaaccgttt cggcatcttt
    12421 cttctgcgct ttttccctga cggtttgttc acgctcttcc gtcagcactt tcttacgcac
    12481 tgcctgtccg tccggctctt cccgttccgg ctcgcccgcc ttttcttcaa cctcgtcggc
    12541 tttatcggca gctttttccg catccgactg ctctgcctct gtcgcagcat ccggttcgga
    12601 caaggcgttt tgatcggccg gttcaggttg gatgtcttcc ttaggctggt ttttcggttt
    12661 caggatttcc gtttctgcag gctgcttcga cggaaccggg attttgaacg cattttgacc
    12721 gctctggttc agataaaaca aaataccggc aataatgacc gtcgccagta tcaaaccgaa
    12781 gaaaaaaccg gacagacctt ttccggattg ggaaaatttg ttcataaaca taccttaatg
    12841 tgtttcagac ggcattaacg ccgtttgctt acgggcggat attctaacaa tatcgccata
    12901 tttgggcaaa acctgcttcc attcccgttc ctataaagcg cgacggaaac ctatggcttt
    12961 catgacgtgg cttctgccga cttcttcgtc gcccgccaaa tccgccaatg tacgcgccac
    13021 gcgcataatg cggtggaagc tgcgggcgga aagggagagt ttttccagca ggccgcccaa
    13081 tgcttcctgc gcttcttttt gaatgcgggc ggatgtgtcg agttcactga cactcaaggc
    13141 ggcattcact ttgccttgcc gtgcgtattg tttgtcgcgg gcggcgataa cgcgttccaa
    13201 aacggacacg ctgctttcac ccgcttcctg ctgcatcagt tcggcggcgg acaggctggg
    13261 gacttcgatg gtcaaatcga tgcggtcgag cagcgggccg gaaattttgc tgcggtaacg
    13321 cgcgacgctt tcgggcgtgc agcggcaggg tttgacggga tgcccgagat agccgcacgg
    13381 gcaggggttc atggcggcga caagttggaa tttggcggga tagacggctt ggcgcgccgc
    13441 tcgggaaatg tggatttcgc cgttttccaa cggttcgcgc aaaacttcca aaactttgcg
    13501 gtcgaactcg ggcaattcat ccaaaaataa aacgccgtga tgcgccaatg aaatttcgcc
    13561 cggacgcgga tccgaaccgc cgccgaccat agccgccgcg ctggcgctgt gatgcggact
    13621 gcggaaagga cggttgctgt cgagttgttg ctggtggttg ggcaggagcg aacgcaatgc
    13681 ccaaacttct accaattcgt cttcggtcag cggcggcagg atgccgggca gccgttggga
    13741 gagcatagac ttgcccgttc ccggcggacc catcatcaaa aggctgtgtc cgcctgcggc
    13801 agcgatttcc aaagcaaggc gggcagtgtg ctgacccttg acatcgacga ggtcgagcaa
    13861 tttggtgttt tcagacggca tctgaggaac ttgacagtcg gtttgcacca aaggttcgat
    13921 accgttcaaa tgggcggcga cttcgcccaa agagcgcgcg ccgtaaacgg taatgccgcg
    13981 catcacggcg gcttgtcctg cgttttcttc aggcaaaaca aatgcacgtt ttgcctgcat
    14041 accctgccac gccatcgcca acgcgccacg cacggggcgc aacagccccg acagtgccaa
    14101 ttcccccgca aactcgtatt ccgccagttt ttcgggtgca acctgccccg atgcggcaag
    14161 gatgccaatt gcaatcggca aatcgaaacg ccccgactct ttgggcaggt cggcgggggc
    14221 gaggttgacg gtaatttttt tggcggggaa ttcaaaaccg ctttgaataa tggcggcacg
    14281 gacgcggtcg cgactttcct ttacttccgt atcgggcagc ccgacgatgt tgaaatgcgg
    14341 caggccgttg gcaaggtggg cttccacttc gaccaacggc gcattcatac cgctcaaggc
    14401 gcggctgtaa accaaggcaa gcgacatatt tcagacggcc ttattcgccg gcttcggttt
    14461 gctgcctgat ttcggcgacg gcttcttcgg cagcggcttc agccgcttcc aatgctgccc
    14521 gttcgggatt ttgcgcggct tcgagttttg ccaaacgcgc ttccaaagcc gccagtttgg
    14581 tacgagtttt gattaaaacc tgctgctgga tgtcgaattc ttcgcgcgta accagatcca
    14641 tacggttgaa cgcgccgccc agcatcgcct taatattttt ttccacatct ttggcagggc
    14701 tgttggcgat ggtttcgctg attttcgaac cgacttcttc aaaaagctgc ttgccgaaca
    14761 taatctgtat ccttcctgaa catatcaaat tcaatcggct attgtataag gaaaaatgcc
    14821 gtctgaaaac gggcggcgga taatcggcaa aacataccgc gcctcctttg cggttgctaa
    14881 attacacctc aaaacacctg ccgcctgaaa acggatttca tattccgcgc aacgccagat
    14941 tacaagacat tacaaaacaa tatactgttt taaatgattt ttccgacgcg catcgtttca
    15001 aactcggctt tttaagccat taagtgcttt gcaaacaaca gaaattgggt tatgctgaaa
    15061 cggattattt acaatttcat atagttttat tacatatctt attgtgattg aagataattt
    15121 atccgaatcc ccctttcggg tatccggatt ttccgttgta cttttattag aaaaacattt
    15181 caggcgcaag ttgcttgcaa tttcaaagcc tgtaattctg aagttttaga cgaggaatag
    15241 cacatgaatc ccatgtacat tacttttgca atctatctgg ttgcagtcct tctcatcggg
    15301 cttgccgcct atttttctac gcgcaatttc gacgattata ttttgggcgg gcgcagccta
    15361 ggcccgtttg ttaccgcgat gtcggcaggc gcgtccgata tgtccggctg gctgctgatg
    15421 ggtctgccgg gcgcgattta tttgagcggt ttgaatgagg cttggattgc catcggcctc
    15481 ttggtcggcg cgtatttcaa ctggctcttg gtggcgggcc gcctgcgcgt gcataccgaa
    15541 tacgccaaca atgcgctgac gctgccggat tatttcttcc accgcttcgg cgcgggcgga
    15601 cacttgatga aagtggtttc cgcactgatt atcctgttct tcttcacgat ttattgcgcc
    15661 tcgggcattg tggcgggcgc aaccctgttc caaagcctgt ttgaaggtat gacttacaat
    15721 caggcaatgt ggctgggcgc gggcgcgacc atcgcctata ccttcttggg cggcttcttg
    15781 gcggtcagct ggacggatac gttgcaggct tctttgatga ttttcgcgct gattttaacg
    15841 ccggtaatgg tctatctggg cttgggcggc gcggaacaga tgtctgccgc gattcaaagc
    15901 gtcgccgcag gcacgggcaa agaatacggc agcctgtttg ccggtacgac cgtcatcggc
    15961 atcatttcca ccgccgcatg gggcttgggc tatttcggac agccgcacat tttggcgcgc
    16021 tttatggcgg ccgaaagcgc gaaatcgctg gtatccgcac gccgcatcgg catgacttgg
    16081 atggcgttgt gccttgcggg cgcggtggcg gtcggttatt tcggcattgc gtatttcggt
    16141 gcaaatcccg acaaagtttc ttctatgagc ggcaaccacg aacgcatctt catcgcgctt
    16201 tccaccctgc tgttcaaccc ttggatcgcc ggcatcattt tgagcgcgat tttggcggcg
    16261 gtgatgtcca ccctgtcctg ccagcttttg gtttgctcca gcgcgattac cgaagacttc
    16321 tacaaaggct ttttgcgtaa aaacgcgcaa cagtcggaac tggtatgggt cggccgcctg
    16381 atggtcttgg cgattgccgt gatttccatc ctgattgctt ccgatccgaa cagcaaagta
    16441 ttgggactgg tgtcttatgc gtgggcaggt ttcggtgcgg cgttcggccc gattgtgatt
    16501 ctgtccgtat tgtggaaacg catcactgcc tacggcgcgt tgtcgggtat ggttgcaggt
    16561 gccttaaccg tagtcgtatg ggcggaatgg ataaaaaaac cggctcaagc agcaggcgaa
    16621 agcggcttgt tgacgatgta cgaaatcgtc ccgggcttta ttgtttgctt aatcattgcc
    16681 gtgttggttt ccctgttcaa caaagaacct tcgcgcgaaa tccaaaaacg ctttgaaaaa
    16741 gccgacgcag attaccgcgc cgcccgataa acccctttca gacggcacgg catcccggtt
    16801 cgtgccgtct gaacccgttt ccgggtcaaa cacaaataaa ccttgcctgc atacaggcct
    16861 tatttgtgtt ttacccgttt cattttcaaa gaaacggaag cacctaccct gcccgcattt
    16921 gaagccttgt atttcatctg cggatttatt acgatattac cgtattcagg ccgcaccgat
    16981 gccgcctgcc ccccgaaaaa ctttggagaa tccaaaaaat gtttcatttt gcatttccgg
    17041 cacaaactgc cctgcgccaa gcgataaccg atgcctaccg ccgtaatgaa atcgaagccg
    17101 tacaggatat gttgcaacgt gcacagatga gcgacgaaga gcgcaacgcc gcctccgagc
    17161 ttgcccgccg tttggttacc caagtccgcg ccggccgcac caaagccggc ggcgtagatg
    17221 cgctgatgca cgagttttca ctctccagcg aagaaggcat cgcgctgatg tgtctggcag
    17281 aagccctgct gcgtatcccc gacaacgcca cgcgcgaccg cctgattgcc gacaagattt
    17341 cagacggcaa ctggaaaagc catttgaaca acagcccttc cctcttcgtc aacgccgccg
    17401 cctggggcct gctgattacc ggcaaactga ccgccacaaa cgacagacaa atgagttccg
    17461 cactcagccg cctgatcagc aaaggcggcg caccgctcat ccgccaaggc gtaaattacg
    17521 ccatgcggct tctgggcaaa cagttcgtaa ccggacagac cattgaagaa gccctgcaaa
    17581 acggcaaaga acgcgaaaaa atgggctacc gcttctcctt cgatatgttg ggcgaagccg
    17641 cctacaccca agccgatgcc gaccgctact accgcgacta tgtcgaagcc atccacgcca
    17701 tcggcaaaga tgcggcagga caaggcgttt acgaaggcaa cggcatttcc gtcaaacttt
    17761 ccgccatcca tccgcgctac tcgcgcgccc aacacggccg tgtgatgggc gaactgttgc
    17821 cgcgcctgaa agagctgttc cttttgggta aaaaatacga tatcggtatc aacatcgatg
    17881 ccgaagaagc caaccgtctg gagctgtctt tggatttgat ggaggctttg gtttcagacc
    17941 ctgacttggc tggctacaaa ggtatcggtt tcgttgtcca agcctaccaa aaacgttgtc
    18001 cgttcgttat cgactacctg attgacctag cccgccgcaa caaccaaaaa ctgatgatcc
    18061 gcctcgtcaa aggcgcgtat tgggacagcg aaatcaaatg ggcgcaagtg gacggcttga
    18121 acggctatcc gacctacacc cgcaaagtcc acaccgacat ctcctacctc gcctgcgcgc
    18181 gcaaactgct ttccgcgcaa gacgcggtat tcccgcaatt tgccacgcac aacgcctaca
    18241 ctttgggcgc gatttaccaa atgggcaaag gcaaagactt tgaacaccaa tgcctgcacg
    18301 gcatgggcga aaccctgtac gatcaagtcg tcggcccgca aaacttaggc cgccgcgtgc
    18361 gcgtgtacgc cccggtcggc acacacgaaa ccctgctcgc ctacttggtg cgccgcctgt
    18421 tggaaaacgg cgcgaactcg tctttcgtga atcaaatcgt tgatgaaaac atcagcatcg
    18481 accgcctgat taagagcccg ttcgacacca tcgccgaaca aggcatccac ctgcacaacg
    18541 ccctgccgct gccgcgcgat ttgtacggca aatgccgtct gaactcgcaa ggcgtggact
    18601 tgagcaacga aaacgtattg cagcagcttc aagaacagat gaacaaagcc gccgcgcaag
    18661 acttccatgc cgcatccatc gtcaacggca aagcccgcga tgtcggcgaa gcgcaaccga
    18721 ttaaaaaccc tgccgaccac gacgacatcg tcggcacagt cagctttgcc gatgccgcgc
    18781 ttgcccaaga agcggttggt gcagccgttg ccgcgttccc cgaatggagt gcgacacctg
    18841 ccgccgaacg cgccgcctgc ctgcgccgtt tcgccgacct gctcgaacag cacaccccag
    18901 cactgatgat gcttgccgtg cgcgaagcag gcaaaacgct gaacaacgcc attgccgaag
    18961 tgcgcgaagc cgtcgatttc tgccgctact acgcaaacga agccgaacat accctgcctc
    19021 aagacgcaaa agccgtcggc gcgattgtcg ccatcagccc gtggaacttc ccgctcgcca
    19081 tctttaccgg cgaagtcgtt tccgcattgg cggcaggcaa caccgtcatc gccaaacccg
    19141 ccgaacaaac cagcctgatt gccggttatg ccgtttccct catgcacgaa gccggcatcc
    19201 cgacttccgc cctgcaactc gtcctcggcg caggcgacgt gggtgcggca ttgaccaacg
    19261 atgcccgcat cggcggcgtg atttttaccg gctcgaccga agtggcgcgc ctgatcaaca
    19321 aagcccttgc caaacgcggc gacaatcccg tcctgattgc cgaaaccggc ggacaaaacg
    19381 ccatgattgt cgattccacc gcacttgccg agcaagtctg cgccgacgta ttgaactccg
    19441 ccttcgacag cgcgggacaa cgctgctccg ccctgcgcat tttgtgtgtc caagaagacg
    19501 ttgccgaccg tatgctcgac atgatcaaag gcgcgatgga cgaactcgtc gtcggcaaac
    19561 cgattcagct cactaccgat gtcggccccg tcatcgatgc cgaagcacag caaaacctgt
    19621 tgaaccacat caacaaaatg aaaggtgttg ccaagtccta ccacgaagtc aaaaccgccg
    19681 ccgatgtcga ttccaaaaaa tccacgttcg ttcgccccat cctgtttgaa ttgaacaacc
    19741 tcaacgaact gcaacgcgaa gtcttcggtc ccgtcctgca cgtcgtccgc taccgcgccg
    19801 acgaactcga caacgtcatc gaccaaatca acagcaaagg ctacgccctg acccacggcg
    19861 tacacagccg catcgaaggc acggtacgcc acatccgcag ccgcatcgaa gccggcaacg
    19921 tttacgtcaa ccgcaacatc gtcggcgcag tcgtcggcgt acagcccttc ggcggacacg
    19981 gtctgtccgg cacaggcccc aaagcaggcg gttcgttcta cctgcaaaaa ctgacccgcg
    20041 ccggcgaatg ggttgccccg accctgagcc aaatcggaca ggcggacgaa gccgcactca
    20101 aacgcctcga agcactggtt cacaaactac cgttcaacgc cgaagagaaa aaagccgcag
    20161 cggccgcttt gggacacgcc cgcatccgca ccctgcgccg tgccgaaacc gtccttaccg
    20221 gaccgaccgg cgagcgcaac agcatctcat ggcacgcgcc caaacgcgtt tggatacacg
    20281 gcggcagcac ggttcaagcc tttgccgcac tgaccgaact tgccgcctcc ggcatacagg
    20341 cagtggtcga acccgacagc cccttggctt cctacaccgc cgacttggaa ggtctgctgc
    20401 tggtcaacgg caaacccgaa accgccggca tcagccacgt tgccgccctg tcgcctttgg
    20461 acagcgcacg caaacaggaa cttgccgccc acgacggcgc actcatccgc atcctccctt
    20521 cggaaaacgg actcgacatc ctgcaagtgt ttgaagaaat ctcttgcagc gtcaacacca
    20581 cagccgccgg cggcaacgcc agcctgatgg cggtcgccga ctgattttac cgaaatcccc
    20641 gggcgcgggc cgtgaaccaa tgccgtctga aaacctttca gacggca
//
LOCUS       DBBZXW010000024        20568 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.024, whole genome shotgun sequence.
ACCESSION   DBBZXW010000024 DBBZXW010000000
VERSION     DBBZXW010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20568
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.024"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            100..741
                     /locus_tag="ACJJD2_000833"
     CDS             100..741
                     /locus_tag="ACJJD2_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HGG7579399.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
     gene            1078..1584
                     /locus_tag="ACJJD2_000834"
     CDS             1078..1584
                     /locus_tag="ACJJD2_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579400.1"
                     /translation="MDAFDFFMQGNFKKIATEQGLDRKYFIFHYIVCNLSAISSFCLM
                     KVIHSYTILCLLIMIIGIAFGFILRNRVLSIVKNKQNFLSDMFPLEMPFFSRVYKIPI
                     LARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVSTYYVF
                     LSRDYKHI"
     gene            1720..2520
                     /locus_tag="ACJJD2_000835"
     CDS             1720..2520
                     /locus_tag="ACJJD2_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HGG7579401.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(2972..3610)
                     /locus_tag="ACJJD2_000836"
     CDS             complement(2972..3610)
                     /locus_tag="ACJJD2_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HGG7579402.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            3865..4707
                     /locus_tag="ACJJD2_000837"
     CDS             3865..4707
                     /locus_tag="ACJJD2_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HGG7579403.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVERPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            4773..5435
                     /gene="exbB"
                     /locus_tag="ACJJD2_000838"
     CDS             4773..5435
                     /gene="exbB"
                     /locus_tag="ACJJD2_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HGG7579404.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            5456..5890
                     /locus_tag="ACJJD2_000839"
     CDS             5456..5890
                     /locus_tag="ACJJD2_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HGG7579405.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(6381..6809)
                     /locus_tag="ACJJD2_000840"
     CDS             complement(6381..6809)
                     /locus_tag="ACJJD2_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HGG7579406.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(6874..8622)
                     /locus_tag="ACJJD2_000841"
     CDS             complement(6874..8622)
                     /locus_tag="ACJJD2_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HGG7579407.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHADSTALLADRHSLPPFGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTIMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTENLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNADHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            8949..10382
                     /gene="ccoN"
                     /locus_tag="ACJJD2_000842"
     CDS             8949..10382
                     /gene="ccoN"
                     /locus_tag="ACJJD2_000842"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HGG7579408.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            10409..11020
                     /gene="ccoO"
                     /locus_tag="ACJJD2_000843"
     CDS             10409..11020
                     /gene="ccoO"
                     /locus_tag="ACJJD2_000843"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HGG7579409.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            11025..11195
                     /locus_tag="ACJJD2_000844"
     CDS             11025..11195
                     /locus_tag="ACJJD2_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HGG7579410.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            11219..12097
                     /gene="ccoP"
                     /locus_tag="ACJJD2_000845"
                     /pseudo
     CDS             11219..12097
                     /gene="ccoP"
                     /locus_tag="ACJJD2_000845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
     gene            12206..12554
                     /locus_tag="ACJJD2_000846"
                     /pseudo
     CDS             12206..12554
                     /locus_tag="ACJJD2_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
     gene            12756..14165
                     /locus_tag="ACJJD2_000847"
     CDS             12756..14165
                     /locus_tag="ACJJD2_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HGG7579411.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            14267..17476
                     /gene="recC"
                     /locus_tag="ACJJD2_000848"
     CDS             14267..17476
                     /gene="recC"
                     /locus_tag="ACJJD2_000848"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HGG7579412.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGSRDTLLHALQTDIQNLDMPSEKAGNINTDDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPFFYTLECLSDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWQQPATVGEWVARCRDLLETLFQTEADDQKAVQNLE
                     NEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAEIYIEARREGQDFSQTAARIRAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLPYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAEMRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLVRLLADTFAAAEKKEEAGAA"
     gene            complement(17546..19114)
                     /gene="mtrF"
                     /locus_tag="ACJJD2_000849"
     CDS             complement(17546..19114)
                     /gene="mtrF"
                     /locus_tag="ACJJD2_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HGG7579413.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            19446..19658
                     /locus_tag="ACJJD2_000850"
     CDS             19446..19658
                     /locus_tag="ACJJD2_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579414.1"
                     /translation="MKNEIQKIMDKYDPWHEDDFESYENIARDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
     gene            complement(19751..20383)
                     /gene="mtrR"
                     /locus_tag="ACJJD2_000851"
     CDS             complement(19751..20383)
                     /gene="mtrR"
                     /locus_tag="ACJJD2_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HGG7579415.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT         5281 a         4713 c         5360 g         5214 t
ORIGIN      
        1 cttatttatt tacggtgcat aggcgggaag ataaacttgt ttcgggtggc gcggggtgtt
       61 aaggtagccg gtaccgacag gttgacgagg aatattttga tgaaactgta tatttacgac
      121 cattgcccgt tttgcgtgcg tgcgcggatg gctgccgggc tgtttggcgc ggacgttgaa
      181 gaagccgtgc tggcaaacga cgacgaggca acgccgatcg gtatgatcgg tgcgaaacaa
      241 gtgcccgtcc tgcaaaaaga agacggttcg tttatgggcg agagtttgga cattgtgcgg
      301 catttcgacc gcgaagaccg tctgaaagac gaagtccgcc ccgagatacg ggcgtggctg
      361 gacaaggtgg gcggatacaa cgacaaactg gtgcagccgc gcgtgatcaa aatcgggctg
      421 cctgaatttg caacgccgga agcggtgaaa tattttacag acaaaaaaga gaaaagcatc
      481 ggcagctttt ccgccaattt gaataaaacc gcccaatacc tcgaacggat aaacgcagat
      541 ttgcaagagt tggaaaattt gatggacggt gcttcagacg gcatcaacgg cggaatcggt
      601 atggaggata ttttggtttt ccccgttttg aggaatctga ccgtggtgcg cggcatcgcg
      661 ttccctcgga agacgatgga ttatttaatc ggtatgagtg aaaaatcggg cgtgccactt
      721 tatttcgaca gggcattgta aaagtggctg ttattaactg acagatgaag gaggttctac
      781 cctatttgag gtaaactcta tttaccattg gccgaaatac cagtgcttat ctccaagacg
      841 accttcccaa tcccttttgc ctcttaaaaa gaagtgacta gtgtgtaaag ttatagttcc
      901 ttttatagct ttccaataaa attaaagtat ttaaaagctt gtttagttct aatttgttaa
      961 tttctgtatc taaataatgt tcagaatagt attatttttt aaataaacca tgaatagtac
     1021 ttcacattgt ttgtcgtatt atttagcttt taaatttcta atgtgaaaga tagtttaatg
     1081 gacgcctttg atttttttat gcaaggcaat tttaaaaaaa ttgcaactga acaaggttta
     1141 gaccgtaaat attttatatt ccactatatc gtatgtaatt tatctgccat ttcttctttt
     1201 tgtttaatga aggttatcca tagttatact atcctttgtt tattaataat gataattggc
     1261 attgcatttg gatttatctt gagaaatagg gttctatcta tagtaaaaaa taaacaaaat
     1321 tttttatctg atatgtttcc cttggaaatg cctttctttt ctagagtata caaaatacct
     1381 atcttggcca gattcttgaa taggggaatg aaatggcttt atctccaaaa ttttttctgt
     1441 ttagttatga tttgtttctc gatatctctt atccttaatg aagaaagggg gtggatgcct
     1501 tattttgcct gctattggtt tggactttgt tatccagtaa gcacttatta cgttttttta
     1561 tccagagatt ataaacatat ctaaactatt atgcgtggcg gtacttccaa aggtaaattt
     1621 taacctaatc aatttactca aaccatccaa aaattaccaa gcagcaatat aaacacagat
     1681 ttatttgagc caacctgatc aaaacaagga actaaataga tgaaaaagac catttttaac
     1741 attaccaaaa tggactgccc gtccgaagaa cagctcattc gcatgcgttt aaaagatgtg
     1801 tctgatattt atgaattaca gtttgatatt gctgggcggt gcttaaccgt ctatcacgat
     1861 aatcaagata caacgatttt acaagtactt gaaccgctta attttgatag tcatatcatt
     1921 tccaccgaag tgattgttga taagatagtg tttaacaagc ctgatgagca cttagaaaaa
     1981 agattattat atcaagtgct catgattaac tttgtgtttt ttatcataga gtgttcggtt
     2041 ggtatttttg ctaattctat ggggctgatt gctgatagtc tagatatgct ggcggacagc
     2101 tttgtctata tattggcgct atcagccatt ggtatgacgc tggcgtataa aaaacgtgtg
     2161 gcatttttgg cggggataac gcagataata ttggcgttat ttggggtgat agaagtgatt
     2221 aggcgtttta tcggtgctga gcagctgccc aattatcaac tgatgattgg cacggcattt
     2281 ttggcattga ttgcaaactg gctgtgctta tatctactga gcaaaaatca aaataaagaa
     2341 atccatatca aagccagcat gatttttaca tccaatgaca ttatcatcaa tatcggtgtg
     2401 atagcggcgg gagcattgac gttattgact cattctagct atcctgattt aatcattggc
     2461 atgattgtct ttgtcattgt actatttggt gccagaaata ttttaaaatt ggcaaaataa
     2521 ttcctttcac cagcaaagga gtttttatgc aaatatcggt caaagctacc tacatacgtg
     2581 gcagtacttc caaaaacttg attttttaaa atgtggttaa tgcgagtttg tttatctggt
     2641 atttgattgg ccaagccttc atccaagcgt ttgacgattt cacgcaaaaa tacccctgat
     2701 ttacacacag ggtctaagaa tgtcgccttt ggatttgacc aaatctcaga cggcaataaa
     2761 tccagcattt gattggcaag ttttggcgat gtgaaaacct catcattaga cagactggag
     2821 tttcttaatc agtgtttcag ttaatgaaag gtattatcat gcaacttggt tctaataatg
     2881 atgaaaaaaa taagattaca ctacaggaaa acgcggcagg gcaatatgtc ctgccgcgtt
     2941 ttctggagcg tttatgccgt ctgaaagcca gtcagacgaa catctgcaca aacgcaatca
     3001 ccagccgcac aatcggtgca ataaacgcac ccaaaacccc ggtcagcata agcagcagga
     3061 taatccacgt cccataaggt tcgattttgc ggaacgcttg cgaatatttc gccgacagga
     3121 aggtgtcgat gaaaatgccg ccgtcccaag gcaggatggg gatgatgttg agcgcgaaca
     3181 gaatcgcatt gatcagaata ccgtagtttg ccatttgagc caacggcatc tgatacgccc
     3241 caccgacata cggagtcagc accaaaacca cgccccacag aacagccatc gccagattcg
     3301 acagcgggcc ggacgcggca acgcaacgcc aggcaaggcg cgggttgcgg aagttgcgcg
     3361 aatcgatagg aatcggacgc gcccagccga acaggaaggg cgtaaacatc aaagtaagca
     3421 gcggtacgat gattgtgccg accaaatcga tatggggcag ggggttcagt gtcagcctgc
     3481 cgtattgttc ggcagtgttg tctccccagt agcgcgccgt atagccgcgc gccacctccc
     3541 tgacggtaat ggcgagcagc acgggcagga cggcaagcag aaacacgccc aaatcaaaat
     3601 tttgaaacat ggttttcctt tgaacagatg tggtgtgcag cccgaaacgg ctgacagaca
     3661 gaagcggcaa tatatcatct aacctgattt tattggaata agaaatcaga cggaatcatt
     3721 ttttctgccg gcccgttatc tgatgatttg ctgtaataca gcgtttaaac acggtttgcc
     3781 tgtgaacgga acagacattc atatgaccaa aaattgtaaa aataggttgc aaataggaat
     3841 tgttgctatt attatgcccg aattatggat aaagaacgaa ttttaacccc cgcagtcgtg
     3901 ttttccgtcg cactgctgca tttggcaatg gtggcattgc tctggcaggc gcacaagctg
     3961 cccgtgatag agtcaggaaa tgttatcgaa tttgtcgatt tgggtgattt tggcggaggg
     4021 gacggtgcac ccgaaggcgc aggtgcgcct gctgcgcctg agccgcaacc tgagcctgag
     4081 ccgcccaaac ctgtcgagcc gcccaagccg gttttgaagc cggtggttac gaaaaaggcg
     4141 gatgcggata ttcagcagcc taaggaagag ccgaaacctg aagaaaagcc gaaacccgaa
     4201 gaaaaaccga aaccagagcc taagccggaa gcgaagcctg tcccgaaacc ggcggaaaaa
     4261 ccggtcgaga ggccgtctga aaaacctgcc gaacatccca gcaatgcttc tgccaaagca
     4321 gacagcgagc agggtaatgg ggaagataag ggaaccggta ccaaaggaga cggaacgggg
     4381 cgcggagaag gcagcggtaa aggtagcggc ggtgtcaaag gcgaacacgg ggaaggagcc
     4441 ggcagcagca aaggcaatcc tttacgcgcc aatggcagca ttccgcgccc ggcttatccc
     4501 acgctttcta tggagaatga cgagcagggt acggttgttt tgagcgtttt ggtttctccg
     4561 ggcggtcatg tcgagtccgt taaaatcgtg aaaagcagtg gtttttctcg gttggacaat
     4621 gcggcacgca aggcggcgca aaacgggcat tttcaagcca atgcctggac ggagtttaaa
     4681 gtccccgtca agtttgaatt gaattaggcg gttgccgcag cggtttgcgg cagcttggat
     4741 gtttgattgg ttttttcagt gttggaatca ttatgaattt gaaattagta tttgaatcgg
     4801 gcgatcccgt cctgatcggt gtgtttgtgt tgatgctgtt gatgagtatc gtaacgtggt
     4861 gtttggttgt cttgcgctgc atcaagctgt atcgggcgcg caaagggaat gccgccgtca
     4921 aacggcatat gcgcgatact ttgtcgctga acgacgcggt cgaaaaagtg cgcgccgtcg
     4981 atgcgccttt gtccaaactg gcgcaagagg cattgcagtc ttaccgcaac taccgccgaa
     5041 acgaagcgtc cgaactggcg caggctttgc cgttgaacga gtatttggtc attcaaatcc
     5101 gcaacagtat ggcgcagatt atgcgccggt ttgattacgg gatgaccgcg cttgcctcca
     5161 tcggcgcgac cgcgccgttt atcgggctgt tcggcacggt ttgggggatt taccacgccc
     5221 tgatcaatat cgggcaaagc gggcagatga gtattgcggc ggttgccggc ccgattggcg
     5281 aggcactggt ggcgacggcg gcgggtttgt tcgtggcgat tccggcggtg ttggcataca
     5341 acttcctcaa tcgcggcaca aaaatactga cccaggattt ggatgcgatg gcgcacgatt
     5401 tgcacgtccg cctgcttaat caaaaggata gctgattata aaaggatagc tgattatggc
     5461 atttggttcg atgaattccg gcgacgattc tccgatgtcc gacatcaacg ttacgccgtt
     5521 ggtggacgtg atgctggtgt tgctgattgt gtttatgatt actatgccgg tgctgacgca
     5581 ttccatccct ttggaactgc cgaccgcgtc cgagcagaca aacaagcagg acaaacagcc
     5641 taaagacccc ctgcgcctga cgattgatgc gaacggcggc tattatgtcg gcggggattc
     5701 tgcaagcaaa gtggaaatcg gggaagtgga aagccgtctg aaagccgcca aggagcagaa
     5761 tgaaaacgtg attgtggcga ttgcggcaga caaggcggtg gaatacgatt atgtaaacaa
     5821 agctttagaa gccgcccgtc aggcaggaat caccaaaatc ggttttgtaa ccgaaaccaa
     5881 ggcgcaataa agttcgacgc ttgaacgaat gccgtctgaa agtctttcag acggcatttc
     5941 ttatgtttaa tcagctatat atagttgatt aaaacaaaaa tgagacgaca gagcgccgtc
     6001 tccatttctg cgcaggcggg aatacaaaca tctgattttt cttttatttt caaacattac
     6061 tgaaatgggt aagtctggag tcctgcctgc gcgagaataa tgaaaatgtg catttctaat
     6121 ttttatagtg gattaacaaa aatcaggaca aggcaacgaa gccgtagaca gtacaaatag
     6181 tacggaaccg attcacttgg tgcttcagca ccttagagaa tcgttctctt tgagttaagg
     6241 cgaggcaacg ccgtactggt ttttgttaat ccgctatacc cactgtaaaa acggagaagg
     6301 acagaggacg gcagtaaggt ttgccgtcct ctttttcaag ttgcggtgga atgccgcttg
     6361 aaggtgtttt cggcttgtaa tcagacgcgg gcgttgtcca gccgctctct gaaattttcc
     6421 aaatttacgc ctgccgcttg ggcgcggcgg atgatttcgt caaccggcat accttctgcc
     6481 gcccggcgga agccccacag gagggagcag cgcgtaccgg tccggcaata ggcaaggacg
     6541 ggatattcgg cttgtccgat gagttggcgg aaggtttcga catcgtgttt ttggatgtcg
     6601 cgtgcggtaa cgggttggtg atggaatcca gtaacgcctg cttgttccag ccactgtttg
     6661 atttgggcga agtcgggttg cgattcttct tcgcggtcgg ggcggttgca gatgacggtt
     6721 ttgatgccca gttgcgcgat ttgttccgca tcggctttgg tcagttgcgg agaaatatag
     6781 aggtgttcgt caagtttcag aatggccatt ttgtttcctt tactttgcgg ttgtttttca
     6841 gacggcattt tgtgtgcaat gccgtctgaa agtttaaccg aacaaccagt tgtccaacag
     6901 gttccggtct gtgatatgta ggatggcagt atccgctgcc gctgcctgaa ccgtcaagac
     6961 ggtttgacgc aatatgccgg cacggaagaa gtggatattg atttttgcat tgacgtggta
     7021 tcgggcccat tgtgcggtaa agtcggtgca ggcataaccg tctaaagcaa tgattttgtc
     7081 ttgcggacac agtgccgcag attccgcgct gccgccgttg aagacatggg tcaggacgat
     7141 gtggtcggcg ttttgtttga aacgtgcgcc aaaatcgcct gccgacggga cggggcagat
     7201 gtgttctgcg tatccgccgc cgtgttgtcg gggaagcggc aggaaggtca gtcccacgcc
     7261 tgcggttgcc aggcattcgg caagcggcaa attttcggta ctgtataacg ctttttggaa
     7321 aaaatcttcc aaatccaagc cggtaatttc ctgacagcgg atttgccagt gtttttccgg
     7381 aatacccgag tgtgtgtccc tccactcccg atagagtttg tccattatcg tatcgagaga
     7441 atgtctgccg ttgcttcggt tgcgtattat cagatcaagg cacaatgcgg caagcgcgcc
     7501 tttctggtag tagctgacga tggcgttggg gctgttttca tcaggtttgt aaaatttgtt
     7561 ccacgcggta aaactcgatt ccgccaaggt ctgcctcaaa cggccgcggg tttgttgtac
     7621 gcgcgtaatg ccttgtgcca gcaggtttaa ataagattcg ggcgagatgg tgcggctgcg
     7681 tgccaaaaac aaatcgtcgt aataggatgt aatgccttcg aatgcccata gttgttcggt
     7741 atagttttct ttgtcgaggt cataaggggc gaacgcggca ggtttgatgg atttgacgtt
     7801 ccacgcgtga aaatattcgt gggagaaaag tccgagcaat gtggtgtagg catcgtcggc
     7861 atcggtcata ccgaacggcg gaaggctgtg gcggtcggcg agcagggcgg tgctgtcggc
     7921 gtgttccaaa ccgccgtaaa tatggtcgcc gacgtggagc aggaacaaat atttttgaaa
     7981 cggggcaggg gaggaaaaca ccgccagttc tgtttcgcag atttttttga tatccgaaac
     8041 cagcctgttg cggtcgaaat cgggatagat gccgcttaag gcaattgtgt gcggaatgcc
     8101 tgccgcctca aaatctaaaa attcaatcaa gcccatctcg acaggtcggt caatcaattc
     8161 ggcataagat gccgcctgaa agacaaacct ccctgtttcc ggcagcgttg tggcaatacg
     8221 ccattcggac ggaatacccg tcaattccaa gcggtgcggc agcgtttccg ttccttcgac
     8281 tttcaaaaac aggcacgatc cgtcaaaaaa accgcgttct gtcgtcagga aagaacctcg
     8341 aaccgacaaa tcgaatgcat atacggtgta gcggatttgc cactcgccgc gtacggcggc
     8401 agcgtgccag cggttttttg caatttgttc gagcggcatg gacgtgccgt tacaggatgc
     8461 atggatagaa gtgatgtggc gggaaaaatc ccgaatcaga tagctgcccg gaacccagtt
     8521 tggcaggctt atttctatag gaagatcatc atcttgtgtg aatgtcagca ggatgtgcca
     8581 ctcgtggtcg agaggggacg gggttatttt ataatgaatc ataactatca aatatatcgt
     8641 taaacgggat ggattaaata cctttaaaat gcagcttaac ctacatcaat aaagtgccac
     8701 aaaaagggaa aattggaaac aaaagcaatg gcggtcgggt tgtaatttat tataacaata
     8761 tgatttatat gtaataaaaa acagattaag caaagggctc gccggcggcg cgaatgtaat
     8821 tccgcttggc gtaataaggc agatatgtta aatttagaaa aaattacgct tgcccggatt
     8881 gcaccttaaa caggctgcgg aagcggcagg ataaaaatct ttattcccat aaattcatgg
     8941 agactctcat ggacacacaa acttacaact acaaagtggt gcgccagttc gccatcatga
     9001 ctgtagtttg ggggattgtg ggtatgttgg tcggcgttat cgtcgccgcc cagctttttg
     9061 ctcctgccct tgacttgtct aatatcggac cttggttcca cttcggccgc ctgcgtccgc
     9121 tgcacaccaa tgcggttatt ttcgcatttg gcggttgcgg cctgatcggc acatcatact
     9181 acgttgtcca acgtacttgt aatacccgtc ttttcggcgg ttggctgccg gcatttacct
     9241 tttggggctg gcaggcggta atcgttgccg ccgtcgtcag cttccctatg ggttggaccc
     9301 aaggtaagga atatgccgaa ctggaatggc cgatcgatat tctgattact ttggtttggg
     9361 tggcttacgc catcgtattc ttcggtacga ttgccaaacg taagattaaa catatttacg
     9421 ttgccaactg gttctacggc ggctttattt tggcggtcgc acttttacac atcgtcaaca
     9481 atatcagcat cccggcaggg ttgatgaagt cataccccgt ctattccggt gcgattgatg
     9541 ctatggttca atggtggtac gggcataacg ccgtgggctt cttcctgact gccggcttct
     9601 tgggtatgat gtactatttc gtacccaaac aagcagcccg ccccgtttac tcctaccgcc
     9661 tgtccgtcgt tcacttctgg gcgttgattt ttacctatat gtgggcgggt ccgcaccatc
     9721 ttcactacac tgcgctgcct gactggacgc aatctttggg tatggttctg tctttgattc
     9781 tgttcgcacc ctcttggggc ggtatgatta acggcatcat gaccttgtcc ggcgcgtggg
     9841 acaaactgcg tacagacccg attcttaaat tcctgattgt atccttgtcc ttctacggta
     9901 tgtctacctt tgaaggcccg atgatgtcga ttaaaacggt caatgcattg agccactata
     9961 cggactggac cgtcgcgcac gttcatgcgg gtgcgttggg ctgggtaggc tttgtaacca
    10021 tcggttccgt ctattacatg attccccgtc tgttcggcaa agaacagatg cacagcacca
    10081 agctggtaga agcacatttt tggattgcga ccatcggcgt ggttctgtat atcgctgcca
    10141 tgtggattgc cggtgtgatg cagggtttga tgtggagttc tttgaacgat gacggtacgc
    10201 tgacctactc gtttgtcgaa tccgtaaaac gcaccatgcc ttactacgtg atccgttttg
    10261 caggtggttt attgtatctg agtggtatgt gcattatggc gtacaacgtg taccgcacag
    10321 ccatcggtgg taaagcagtc gatgccgaaa tccctgcggt ttcccaaaca cagcaccact
    10381 aaaatactaa gaaagatagg ctaccaaaat gaaattacaa caattggctg aagaaaaaat
    10441 cggcgttctg attgtgttca cgctgcttgt agtcagtgtc ggtctgttga ttgaagttgt
    10501 gcccttggcc tttaccaagg cggcaacaca gccggcgccg ggcgtgaagc cttacaatgc
    10561 cttgcaggtt gccggacgcg atatttacat ccgtgagggc tgttacaact gccactctca
    10621 aatgattcgt ccgttccgtg cggaaaccga gcgttacggt cattactctg ttgccggaga
    10681 gtcggtttac gaccatccgt tccaatgggg ttccaaacgt accggtcctg atttggcacg
    10741 tgtgggcggt cgctattccg acgaatggca ccgtatccac ctgctgaatc cccgtgatgt
    10801 cgtgcctgag tccaatatgc cggcattccc gtggcttgca cgcaataaag tcgatgtcga
    10861 tgcaaccgtt gccaacatga aggctttgcg taaagtaggt actccttaca gtgatgagga
    10921 aattgcgaaa gcacctgagg ctttggcaaa caaatccgag ctggatgctg tagtcgccta
    10981 tctgcaagga ttgggtctgg ctttgaaaaa cgtaaggtaa catcatggat attaacggta
    11041 ttcgtgctct cttcacggta tggatcttta tctgtttcct gttggtactc tatatcgtct
    11101 tcaacaggcg gaataagaaa aactacgata atgccgcaaa cagcattttt gatgaaaacc
    11161 aagatgcgca agataagaaa agcgaaaacc gttaatattg tgataacgga gcaaaacaat
    11221 gaacacaaca tcccaattta ctagtaattt ctggaatata tatattgcag ttattgtctt
    11281 actgagcttt atcgctttgg cttggctgct gctgtctcaa aatgttgtca aacgtccgaa
    11341 gaagggcgaa gaagtacaaa ctacgggtca tgagtgggac ggcattgccg aatacgacaa
    11401 tccgctgccc cgctggtggt tttggctgtg tgttttgacg tggctgttcg gtatcggtta
    11461 tttggttatg tatccgggtg tcggcgacta caaaggtctg ctgaaatgga ccagccataa
    11521 ccaatatgaa aaagaggtca aaaaagccga tgagcaatac ggcaaactgt atgccaagtt
    11581 tgcggatatg ccgattgaaa aagtggcaaa agaccctcaa gccaagcaaa tcgcccaaaa
    11641 cctgtttaac acttattgta tccagtgcca cggctctgat gctaaaggct ctaaaggttt
    11701 tccgaatctg accgatagcg attggttgtg gggcggtgat cccgataaaa ttcacgagac
    11761 catcgaaaaa ggccgtgttg cgactatgcc tgcctggggc cctgctttgg gcgaagaagg
    11821 cgtgaaagac gttgcccatt atgtgatgtc cctttcaaaa cccgaaggtc agtatgatga
    11881 ggaacgtgcc gcgcgcggac aagccttgtt cagcggtccg cctgccaact gtttcacttg
    11941 ccacggcgat aagggacaag gtatccaagg tttgggtccg aacctgactg atgacgtgtg
    12001 gttgtggggc ggtacgcaaa aatccattat cgaaaccatt accaacggtc gcagcagcca
    12061 aatgcccgct tggggacatt tcttggataa agacaaactg catattatga ctgcttatgt
    12121 atggggtctt tccgataaag acggtaaagc tctggtgaaa aaagccgagc ctgcaccgac
    12181 tcccgcaccg gcggcagaac ccgcagcctc tgctcctgca gaagcagcac aagccgcgtc
    12241 cgaagccaaa cctgccgcag cagaacctaa agccgaggaa aaagccgcac ctgctgccaa
    12301 agcggacggc aaataggttt atgaaaccgt ttgtgccgcc tgccatggca atgcggttcc
    12361 gggtattccc catgtaggca tcaaagccga ttgggccgac cgcatcaaaa aaggcaagga
    12421 cacgttcgtt gcacaaacac gcgatcgaag gtttcaatac gatgcccgca aaaggcggtc
    12481 gcggcgattt gagcgatgat gaagtgaaag ctgcggttga ctatatggtc aaccagtcag
    12541 gcggcaaatt ctaacttgac tgagtttccg atattatcgg ttatgaaaat ccagattcag
    12601 tattgaatct ggattttttg ttttaacggg catccggttt taaacgcaga ctgcctattt
    12661 gttgtaatga attttgactt tagtcataaa gaattagtct ttattgttta taatcgcgca
    12721 tcatcacgat agccctattt tcaaaaggac gattaatgga tacacaaatc aaaactgaag
    12781 ccgacaatca gagcaaccgg cgttatctga ccgtttggcg gtggcatttt tatgccggtc
    12841 tgctggttat gccttttctt accctgcttg ccgttacggg tttgggtatg ctgctgtttg
    12901 ccaatattac cggtaaggag ggcgagcgga ttcatgttgt gccgcaggca acggtacaac
    12961 ctctgtctgt tcaggcggaa gcggcacgca gtgccgttaa tccggaaact tcgtccgtcg
    13021 ttcagtatat tgcgccgcgt gccgatgata tggttgccgt gttccgtgtc aacaatgagg
    13081 gcaaggcaac gatggtcgcg gtcgatcctt atacggcaaa agtggtcagt accatgccgc
    13141 gcaatcaggg ttggtattac gcgatggatg aaatccacag cgatatgatg ctcggttcga
    13201 caggtgatta tcttttggaa acggctgcat cgctgacgat tatcatgata atcagcggtt
    13261 tgtacctttg gtgggtgaaa cggcgcggca tcaaggcgat gctgctgccg ccaaaaggca
    13321 gggcgcgttc ttggtggcgg aatctgcacg gcgcgtttgg aacttgggtg tcgttgattt
    13381 tactgttgtt ctgcctgtcg ggtattgctt gggcaggtat ttggggcggc aagttcgtgc
    13441 aggcttggag tcagttcccg gccggcaaat ggggtgtcga accgaaccct gtttcagtcg
    13501 tgccgaccca cggcgaggta ttgaatgacg gcaaggttaa ggaagtgccg tgggttttgg
    13561 agcttacgcc tatgcctgtt tcagggacga ctgtgggcaa agacggtatt aaccctgacg
    13621 agccgatgac attggaaacc gtcgaccgtt ttgcgcggga aatcggtttc aaagggcgtt
    13681 atcagttgaa tttgcccaaa ggcgaggacg gagtgtggac tttgtcgcag gattctatga
    13741 gttacgacat gatcagcccg tttgccgacc gcacggtgca tatcgaccag tacagcggca
    13801 aaatccttgc cgacatccgc tttgacgatt acaacccgtt cggcaaattt atggcggcaa
    13861 gcattgcgct gcatatgggt actttgggct ggtggagcgt gttggcgaac gttttgttct
    13921 gccttgccgt catttttatc ggtatcagcg gctgcgtgat gtggtggaaa cgccgtccga
    13981 ccggagcggt gggcatcgtt ccgccggcgc agaaagtcaa gctgccggtt tggtggatga
    14041 tggcattgcc gctattggca atcgcactgc tcttcccgac cgcactgctt gccattgccg
    14101 tgatttggct gttggatacc ttgctgctgt cgcggattcc tgttttgagg agatggttta
    14161 aatgacccga tgccgtctga agcgttcaga cggcattttg tttgaaggcg ggcgggggaa
    14221 aggctatata atcccgaata cttgaccaca gcttctgttt gaaatcatgt tttatctgta
    14281 tcaatccaac cgtcttgaaa cgctggcggc actgtttgcc cgcattcaaa aagtcaaacc
    14341 gctgaaatcg gttttacagc ccgaacagat tattgtgcag agtcagggga tgcgccgcta
    14401 cctcaatacc tgcctcgccc gcgatttggg cgtggcggcg aatttgtcgt tcagcctgcc
    14461 cgccggtctg acgtggaagc tgatgaaaaa actgattccc ggtattccgg aactcagccc
    14521 gtttgcgcct gaagtgatgc gctggcggct gttggatttg ttccgcagcg aggcatttcg
    14581 gaatacggca gaatttgaag atgtgaggaa tgtgctgcaa gactatctgg gcagcggcga
    14641 atcggcggat tatcagcttg ctggccagct tgcagacata tttgaccaat acctcgtgta
    14701 tcgtccgcag tggatagacg cgtggcagca gggcaggata ctcagtttgg gcgacgatga
    14761 aatctggcag tccaaactgt ggcgttatct tgatgacggc aggcagagcg cgccgcaccg
    14821 tgttgcgttg tgggaaaagc tgttggaatc tttgagcagt gataagctgc ccgagcgtta
    14881 tttcgtgttc ggcatttcca cgatggcgcc gatgtatttg cagcttttgc acaagctgtc
    14941 cgaacattgc gatgtgttcg tgtttgcact caatccgagt gggatgtatt ggggcaacgt
    15001 catcgaagcg gcgcaaatcc tcaaaggcgg cggcgatccc gatttaactc aggcagggca
    15061 tccgctgctc gcctcattgg gcaagcaggg gcgcgacttt ttcgactttt tgaacgaaat
    15121 ggaaatagaa ggagaaacgc cggtgtttga agaaggcagc cgcgatacgc ttttgcacgc
    15181 cctgcaaacc gatatccaaa acttggatat gccgtctgaa aaagcgggaa atattaatac
    15241 ggacgacgga tcgatacgca tcgtctccgc acacagccct ttgcgcgaat tgcagatact
    15301 caaagacaaa ctgttgaaaa ttctgcatga acatcccgat tggcagccgc atgatatagc
    15361 cgtattaacc ccgaacatcg aatcctatac gccttttatc gaagccgtgt tcggacaggc
    15421 gcagcccggt gcgcaggcat tgccgtattc cgtttcagac gtgaaaatca gccgccgaca
    15481 accgtttttt tatacattgg aatgcctgtc cgacttgttg gaaagccgat ttgaagtcga
    15541 taaagtgctt gtgcttttag aaaccgcacc cgtgttgcgc cgtttcggac tgactgagga
    15601 cgatttgccg cttttgcacg acatggttgc cgatttgaac gtccgctggg gtttggacgg
    15661 agaaatgcgc ggcggcacgg atcagctgtt tacctggaag caggcggtag aacgcatgat
    15721 attgggctgg atgctgcccg aaggcggcaa tccgatgtgg caggatgtca gcgcgtggta
    15781 tgccgacgtg aaccaaaccg ccctgttcgg acgttttgcc gccctcctcg aaaccctgtc
    15841 ggatattgta cggatatggc agcaacctgc gacggtcggc gaatgggtgg cgcgttgccg
    15901 ggatttgctt gaaacattgt tccaaaccga agccgatgac caaaaggcag tccaaaacct
    15961 cgaaaacgaa tgggtcaaat ggcaggcgga aaccgaattg gcgcaatttt ccggacagtt
    16021 gccgccgcac accgtcatcc gccacatccg ccgctttctc gacagcgaaa gcgaggcagg
    16081 ctttttacgc ggcggcatca ccttttgcag tatggtgccg atgcggagcc tgccctttaa
    16141 agtcatctgt ctgttgggtt tgaacgacgg agattttccc cgcaatacca aagccgccgt
    16201 attcgacctg attgccaaac atcccgccaa aggcgaccgc gcccgccgcg atgacgaccg
    16261 ctacctgttc ctcgaagccc tcatcagcgc gcgtgaaatc ctctacctgt cctacatcgg
    16321 gcgcgacatc cgcaaagacg aagagcttgc cccgtcttcc ctgttgggcg aactcatcga
    16381 taccgttgcc gctatggcgg gcatcggtag tcgccaactt gcacaaaact ggatagaaca
    16441 gcatccgctg caagcctttt cacgccgata tttccaagaa ggcggacgtt cagacggcat
    16501 attcggcacg cgtaccgact acgccaccgc gctcggacaa acgcccgaac cgccgcaacc
    16561 ctttttcgac caacccgtag aaaacgccga acctgttgcc gaaatcggac aggacgaatt
    16621 tatccgtttc tggcgcaacc ccgtcaaagt atggcttcag cagcagcttg cgtggagcga
    16681 accccatatc ggcgaagcct gggagcctgc cgaacccttc gagccgcaac acgccgatca
    16741 aatcgccgaa atctatattg aggcgcgccg cgaaggacaa gatttttccc aaaccgccgc
    16801 ccgcatcagg gcggaaagcc tgctgccgtc gggagagttg ggcagacttt ggcagcagga
    16861 cttccaaacc gctgccaaac aaatcgacac ggcggtttta aacagtccca aacttcctcc
    16921 gctgccctac gccataccgt cggacgggca aatcctgaaa ggcagcttgg gcaatctgta
    16981 ccgctgcgga caagtgtttt acgcctacgg caaacccaac gcgccgcaac gtatcgcttt
    17041 tttgttggaa cacctgatat tttgcgccgt tatgccgtct gaagccgaaa tgcggcaaac
    17101 ctttatcgtc caatccggag aaaccgaaat attggcggaa atcgcgcaag acagggcatt
    17161 gcagctattg tcggaatgga tggcgttttt caatatcggg caaaaccgcc cgctgccgtt
    17221 ttttgccaaa acctcgcttg ccgccgccga agcgtttgcc caaaaacaag attgggaagc
    17281 cgccctgaaa aaagcccaaa ccgcctatta cggcagcaaa gtcagcaaag ggcagaaaga
    17341 ctataccgaa gtcgccctcg tgttcggcaa cgcaagccaa aacccgctcg aacagcccct
    17401 gtttgaaaac ctcgtccgtc tgcttgccga cacgtttgcc gcagcggaaa aaaaggaaga
    17461 ggccggagca gcctgacggg atggaaaggc aaatgccgtc tgaaaacagc aaaaaggttt
    17521 tcagacggca ttttgtttat cgtgtttaag gtgcgggata gaatgtgggc gcgccgggac
    17581 cgacgggcag gcccaaaaca aatacccaaa tgcagaataa ggcaatccac gcaatcaaga
    17641 agaaagcgga atacggcaac atcatagaaa tcagcgtacc cacgcccgca tcttttttgt
    17701 atttgatcac cgtcgccata atcagcccga aataactcat catcggcgta ataatattgg
    17761 taacggaatc accgatgcgg taagcggctt gaatgacttc gggcgcgtag ccggccaaca
    17821 tcagcatagg gacgaaaatc ggcgcagtta ccgcccattg cgcggaggcg gagcctatca
    17881 tcagattgat aaaagcacaa attaaaataa aaccgataaa caacacgctg ccgcccaagc
    17941 cgacttcttt taagaacgtc gcccctttaa cggcaatata ttgcccaata ttcgtccaat
    18001 taaaaaatgc gacaaactgt gcggcaaaaa agatgatgac caaataaagc cccagagtac
    18061 tcatcgattc ggccatcgca ttaacgactt cctgttcgcc gcgcaaactt cgggttaccc
    18121 tgccataaac aatgcccggc agcgcaaaca acaagaaaat aaaaacaaca atcgatttta
    18181 aaaacggcga accggaaacc aatcctgttt caggatgacg caaaataccg tcggcaggga
    18241 cgatgctcca agccaatagg gcggataagg caacaaacac cacgccagcc caaattaatc
    18301 ctttatattc caaaggcgtg atttcattgg aatgccgaat gtctttttct tcttgtgaca
    18361 aatctgattg ataagggccc aattgcggtt cgacgatttt ttcagtaaca aaataaccaa
    18421 tcaaagcaat cacaaacgta ctggctacca taaaaaacca gttggcttca gggcctacga
    18481 cgtagtcggg atggatgatt tgcgccgcct gttgggtgat gcctgccaag agcggatcga
    18541 ttgtgcctaa gaacagattg gccgaataac cgcccgaaac gccggcgaaa gccgcagcca
    18601 gaccggcaag cggatggcgg ccgagggaat gaaagatgat ggcggacaaa gggattagga
    18661 cgacatagcc caattcagaa gcggtattag ataaaatccc tgtaaaaaca accataaaag
    18721 tagtgagttt gcgtggagat tttgtgagca ataagcgcat taatgcggaa atcaagcccg
    18781 atttttccgc aatccccacg cccaataaag aaaccaacac cgttcccaac ggcgcgaaac
    18841 cggtgaaatt tttaacggta tgcgtcagga ttttgatcaa accgtcagca tcgagcaggc
    18901 tgacaacgtg aatcaaaccg tcatcggcac gtcctttcgc accaacaggg cgcggatcgg
    18961 ggacggatag tccgaaatac gcaccggcgg cagaggcaat cagcaataac acaatgaaaa
    19021 taataaaaag cgtaaccggg tgcggcaaca tattgcccag ccattcgact gtgcgtaaaa
    19081 atcgtccgtc ccgttgcgta tcggtttgac tcatctgctt ctccttaaaa aatatattga
    19141 gtgcattaaa tttttgaatg taacatgaag tgttttgtaa gcaaactaaa ataatcgcat
    19201 atgtatataa ccgcaataga ttaaaacaga aaatgcccac atcgttattc tcataaaggc
    19261 ggtaatccga aaacttgacg ttaaagcctt atcaggaatg actggaactc aacaaagcgg
    19321 tttcccgctt tcgcggaaat ggcgggattt tcggtttttg tttgcaaaaa tgccggagaa
    19381 aaatgcagtt tacattttga atggtattgt tattaattgt aaataaatat tggaaggtaa
    19441 atgatatgaa aaatgaaatt caaaaaatta tggacaaata tgatccatgg catgaagatg
    19501 attttgagtc gtatgaaaac attgccagag atgtatcgtt gatgacagat aaaacgttca
    19561 ttgaacatta tttgttagaa gtttattcag aagaaaacgg acattttgac caagagaatg
    19621 tccatgcaat gatagaagaa attaaaaatg caatttagtg aatatgtatt tttagaagaa
    19681 ggctttgtgt cattttgatg ccgtctgaaa gggtttgttc gtttcagacg gcattgttac
    19741 caaggcttga ttatttccgg cgcaggtcgg gatggttttc caagttgtcc atcattatcc
    19801 cgatgatgcg cggggcggtt ttgcccaaat cgaaacgttc gcaggaagag aaccaccgcc
    19861 aaatcagccc gtccaaggtt gatttgatga agatgaccgc cgtttccttg tccaaatcgt
    19921 cagccaaatc ctgattttcc accgcttcgg tcaaaacggc ggtaattttc tcgcgccaga
    19981 ttgcctgatg cttgcgggca atggcgataa cggcggcgtt ttgctccgtg tgttcgcatt
    20041 ttaaaaacag gatgttgtgg aatttgtagt agatgtcgtt gctttgcagc cgctcgaaaa
    20101 agtgcagcag cgtgtggcgg aataccgccc aagaccctcc ttcggcatct tcggcatctt
    20161 gcgcgatgca gttttcgatg tcgtcgcaga tacgttggaa cagcgcgtcg aacaagtctt
    20221 ccttattttt gaaatgccaa tagagcgcgc cgcgcgttac gccggcggct tgggcgattt
    20281 cgttgagcga ggtgcgcgca atccctttgc ggtaaaaggt ttccaaggcg gcaagcatca
    20341 ggtgttcttt ggttttcaag gcttcggttt tggtttttct cataatggcg ttttcgtttc
    20401 gggtcggttt gatgagggcg gattataaaa aagactttgt aaccatgcaa tcgtgtatgt
    20461 ataatgaaac ccatgaaatt gagactacat ctcaactttg aaaacaggca taacctgctt
    20521 tgcaacccgt tcgaacattc gggtatcaaa gcaggcggtt tttatatc
//
LOCUS       DBBZXW010000025        20161 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.025, whole genome shotgun sequence.
ACCESSION   DBBZXW010000025 DBBZXW010000000
VERSION     DBBZXW010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20161
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.025"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(203..278)
                     /locus_tag="ACJJD2_000852"
     tRNA            complement(203..278)
                     /locus_tag="ACJJD2_000852"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(243..245),aa:Asn,seq:gtt)
     gene            complement(371..730)
                     /locus_tag="ACJJD2_000853"
     CDS             complement(371..730)
                     /locus_tag="ACJJD2_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HGG7579416.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(753..1397)
                     /locus_tag="ACJJD2_000854"
     CDS             complement(753..1397)
                     /locus_tag="ACJJD2_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HGG7579417.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADV
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1399..1935)
                     /locus_tag="ACJJD2_000855"
     CDS             complement(1399..1935)
                     /locus_tag="ACJJD2_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HGG7579418.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1947..3044)
                     /locus_tag="ACJJD2_000856"
     CDS             complement(1947..3044)
                     /locus_tag="ACJJD2_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7579419.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3047..4483)
                     /locus_tag="ACJJD2_000857"
     CDS             complement(3047..4483)
                     /locus_tag="ACJJD2_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7579420.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="ACJJD2_000858"
     CDS             complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="ACJJD2_000858"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HGG7579421.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFITHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVRLTYHPLFFIARYSAEGRQ"
     gene            complement(5473..6120)
                     /locus_tag="ACJJD2_000859"
     CDS             complement(5473..6120)
                     /locus_tag="ACJJD2_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HGG7579422.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFDEIHQELIALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="ACJJD2_000860"
     CDS             complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="ACJJD2_000860"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HGG7579423.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFSRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAVCL"
     gene            7495..8592
                     /locus_tag="ACJJD2_000861"
     CDS             7495..8592
                     /locus_tag="ACJJD2_000861"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HGG7579424.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGKGNLRLGN"
     gene            complement(8799..10265)
                     /locus_tag="ACJJD2_000862"
     CDS             complement(8799..10265)
                     /locus_tag="ACJJD2_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HGG7579425.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFLAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10463..11386)
                     /gene="speB"
                     /locus_tag="ACJJD2_000863"
     CDS             complement(10463..11386)
                     /gene="speB"
                     /locus_tag="ACJJD2_000863"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HGG7579426.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11485..13377)
                     /gene="speA"
                     /locus_tag="ACJJD2_000864"
     CDS             complement(11485..13377)
                     /gene="speA"
                     /locus_tag="ACJJD2_000864"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HGG7579427.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13544..13828)
                     /locus_tag="ACJJD2_000865"
     CDS             complement(13544..13828)
                     /locus_tag="ACJJD2_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HGG7579428.1"
                     /translation="MKKLLLVAVVSLSAAAAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13979..15787)
                     /gene="aspS"
                     /locus_tag="ACJJD2_000866"
     CDS             complement(13979..15787)
                     /gene="aspS"
                     /locus_tag="ACJJD2_000866"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HGG7579429.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGTKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(15845..16546)
                     /locus_tag="ACJJD2_000867"
     CDS             complement(15845..16546)
                     /locus_tag="ACJJD2_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HGG7579430.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16689..17837)
                     /locus_tag="ACJJD2_000868"
     CDS             complement(16689..17837)
                     /locus_tag="ACJJD2_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HGG7579431.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPSSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17998..18261)
                     /gene="rpsT"
                     /locus_tag="ACJJD2_000869"
     CDS             complement(17998..18261)
                     /gene="rpsT"
                     /locus_tag="ACJJD2_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HGG7579432.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18564..19706
                     /locus_tag="ACJJD2_000870"
     CDS             18564..19706
                     /locus_tag="ACJJD2_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HGG7579433.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5198 a         5195 c         4681 g         5087 t
ORIGIN      
        1 caatgccgta ctggtttttg ttaatccact ataaaatcga gtttatccta gctgtccagg
       61 acagccccta ttttttcata accatcacga aaggaatttt gcaaagattt tattccatct
      121 caaaacaatc atctcaaaaa tgcgtttctg accgccggta aaacaaaacc ctctaagaaa
      181 atacttagag ggttttgaaa tttggctccc cgacctgggc tcgaaccagg gacctgcgga
      241 ttaacagtcc gtcgctctac cgactgagct atcggggaat aagcgcgaat aataaaacag
      301 aaataccgaa cgtgtcaata taaattgaca atcgattgca ctttatctgc aagcccgcaa
      361 tctttatatg ttatatggct tccgcaatat gccttgccgc acgtttggca tccaatagga
      421 ttaaaccaag tctgccggtt tcttttgcca ccagcaccaa cacggcatct ttacccgcct
      481 gacttaaaag gatatagcct gattttcctt taatcatcac ttgttccaat tccccgcagg
      541 cgagttcctg caccgagcga ctccccaaag caagcaaagt ggcagaaatc gcccctaccc
      601 tgtccgaatt caaatgtgaa ggaagcattg tcgccatcgg caatccgtcg gttgagataa
      661 cggcagacgc gataatatcc gtagatgtat tgtttaaatc ttcaaggatt gaaatcaata
      721 attgctgcat aacccctcct ctctcccaag ttttacacgc ggttgctgta acggcggtat
      781 aaaatcctta ccaaagtaac aaatgcctct ttgcccaaat cgggaatgcc gccgataacc
      841 aaaataaatt tggttgaacc gatatacaat gggaaaaatg tcaattcgct ctgaccggaa
      901 ggatcgcaaa cgccccaagc gttattgttg atatacaggt tgttcttaat cagcagccgg
      961 tatttctttt ccatctgtgc gacttctgcc gccaacaacc ccaactcttc cgccgcctca
     1021 tgatggaaat tggcgttggc aagatacaga ccgttccgat cgaccaataa cgccttaccg
     1081 ctgccggaca attgttccat cagcaacggc aattgctcgt ccgacaaatt gatgccgtct
     1141 gaatgaccgt tttcatcgcc atagaggaat tcgagttttt gcaaacggta caacaggttc
     1201 aaagcggtat cgatgtcggc ggtgtccgcc caggtaagca gcttctcact gctgaccatt
     1261 tcgtccacat ccgctttcaa caggctgtgc aacaaagttt taccggcact gggggcatcg
     1321 ctggatacgg cataaaatgc accggcagga gtcaggcggg gatataaatt tgcttgtagt
     1381 gaaagtgttg attccatatt aaacctccag tcccggatca atagaaaata acattgcgct
     1441 aaccaattgt tttacgtcat cttccttacg ggcatcaatt tcaaaaaccg gaacattaag
     1501 attatgtttt gcaagatatt tgtgatacac gtcgataccg ggctgagagc gtatatccat
     1561 cttggtaata ccgacaacga cgggtgcctt ctccagcagc cctcgaaacg aatgtaaaaa
     1621 gaattccaaa tctttcaacg gattggttcg ggcattatct aaaagcaaga ccaaacccat
     1681 actgccttgg cttaagattt cccacataaa gttgaaccgt tcctgaccgg gcgtaccata
     1741 taaatggact ttggtatcct catccaagct gatggccccg tagtccatcg ccactgtcgt
     1801 attccttttc ctatccaaag tcatatcgga tgcggaagca tcggtctgaa cgagtgcttc
     1861 gtccgaaata gccgcaatgg cagtggtttt ccctacgccg acaggtcctg tgaaaataat
     1921 tttattttct ctcatctctc cgcctcttag ctgcccaaca gttttttcat cagcctttgc
     1981 agaagaccgc gcgactggga ttgggatggt gttgtgattt tttccgcttt tttcatcatt
     2041 tcactatcag aggcagaatc ggctccgata tttattttat ccgccatatc ggagtatgcc
     2101 tgttgtgaaa ccgtttttaa atctaccgac aaaaacccgg ttgtataggt tgccgcaaga
     2161 taattcagaa tatcattgag gtttaaaggc atcactttat acaacacgtt aaggttgacg
     2221 gatgccttgg tcagaaatgc cgacaagcgt atcgaccccg gcacatttgc caaccgggtc
     2281 aggtttggcc aagatttcaa cgtaaacgga gtatcgggag aaatcggata aatcaacctg
     2341 ccctgcgccg tccaaatgga aaactgccac atacaggaca taatgcctac tttagccttt
     2401 tcgcgccatt gcgggttatc gggaacagtc ttgcagctga cctgcaaatt ttcgtctttg
     2461 cacaattctt cgagtttttg cacactttct gtcagcaaaa cccgttgtat cgaggggaaa
     2521 acaataagga ccggcttatt tccatgcaag atagcgatgt cctgcctgtt cttttccgca
     2581 aaccgcaacg cccccaataa tcctttattc gggttaaact ggcgtatcgt aaccgtacgc
     2641 tgcacattcc cgttattttt cgccgaccgg tctgcgggtg caataaacga tttcccataa
     2701 acattctcgc cctgcaacaa tttgcggagc ataggaaaca atgtttcaaa ccgaatcggt
     2761 ttgggcaggt agggaacttc agaatcggga actttctccg aacagacggc gacgggtata
     2821 tccttataac gctcggcaag ctctttccaa agttcaaaac cgccctcggc atcggtatcc
     2881 gccaaaacca aatcgggcac ggcactgccg tctgaagggg atactgtttc ataacgggtg
     2941 gtattgtgca ttttgaatgc cattttgaaa acggattcct gctgcgccgt catccccgcc
     3001 aacattacgc gtactgtttt aattttcggc agttgaactt ccatttttat tttccgtacc
     3061 gttttatttt tttaatattt tgattcatac gctgcagcag ccggctcatc agcataacga
     3121 cctcttcagg aagcctgtcc gcacgttccc tcaataccct taaaaactgc cccaacctat
     3181 cccaatcttc agtacgttca taaatatcga tcaacgtaat ataaagctgg gactcgtcgg
     3241 gatatttcaa taccgcctgc tccaacacat ccattgccgc ttcaatctga ccatacatca
     3301 gcaacgactc tacttcctta accgcatcgt ctgccggaga cgaaccggtg ttgatcaacg
     3361 aagaatcttg aagcaccaaa tcccgatgtt gcgatttgaa tttctgtata tttttcggca
     3421 gatacccgtg ccccataccg atgtctttga tttgccggtc gttcggccct ttttccaaat
     3481 catcgaaaac ttcatggtaa cccaagctgt acccccaccc cagcatccgc tctttaacct
     3541 gcctgccgta gttacccaac gtttggtaaa gtttccacaa atgtccggca aaacggtcta
     3601 tgtccgcgtg ttggtaatcg agtttcaacg catcgataat caggtttgca ggtttttcgg
     3661 aagtttggat ggcacggtcg tattgtttcg atgccgtttc atagctgact ttgtctttaa
     3721 ggattttcgc accttgatcg gcgcgaacca aaccggcaat cgcaccgatt tcctcttgac
     3781 tgattccgga cacgtctttt ttgccccgca caatcgggat gcgcttgatt tcttcggctt
     3841 cataagcctt accgccggca tccggcgggg gcgatgcgga agctgccgtc gcagaaccgc
     3901 cttccgcacg tttttcaatc tcctgagtgc cccatcccaa accttcttcc gccaagacac
     3961 ggatacgcaa atggtttgaa tcgcgctgta atgcctgttc gatatatttt gccaaaagtt
     4021 cggaaggaat cagtttgccg tatttttgca gattgtctgc caaaacatcg acatccccca
     4081 cttcgagatt gatatcgagc agctcgcgga taaggttttc aggtttcgct tcaccatccg
     4141 gaatgccgtc cagataggca gccaaagatt cggcagcctt gccctgataa ccgaattgct
     4201 tataaacctg atactccgta agcggatcga cttcttgcgc ggatacggcg gcggatgcgg
     4261 tctcggcact ttcgttccaa gaccagtcgg gttgcgtgcc gtctgaaacc gattgtccaa
     4321 tctgatcgac ccagtccgaa tcattgcttc cgggtgtctg cccctgcgta ttgccgacac
     4381 cttgggattt gcgcttcggt gttttcttac cctgcttcgc acgcataacc aaaagcatca
     4441 gcaataccgc cagtgccaaa ccgataatta atgagttttc caaaggatac tcccgatacc
     4501 gtaacgagcg gatagctgac cgcctgcaac ggccattgtc cgcttttatt attaacgatt
     4561 tactgaaata gacttgtaag ttttaaatca taccataatt taacgtttaa caatatgcct
     4621 tctgcacaag cctcgccata ttacctttta cccacatcag tatcaatacc cgatataaaa
     4681 ataactttgc ccataagctg ccttattgcc tgccctccgc agagtagcgc gcgataaaaa
     4741 ataacggatg ataagtcagg cgcactttgc ccgacggcat actgaacgcc gacaagtaat
     4801 cgccaataaa tccattgaga ttttttcttg tccaattttt ttggttcgtg gcggtaacgc
     4861 ctgtatattt aaggtgtttg agtacatcta acggcgtatc aaagtctagt attaccttaa
     4921 aatcctcaca ccataaaagc tcaaaatctt tggctaacca agtctgccat tgggataaag
     4981 tcgggtaatt taagcctata tttgtaattt ggcggacttc ttttaaattg tctttgccaa
     5041 aggttgcaac cgccaataat ccgtttgctt tcaagcctgt tttgcaatgg gtgataaaag
     5101 cgtcgggttg atgaaaccat tgcacggcag atgcgcttgc gattaagtca aattgtcgtt
     5161 gaaaaggaaa gttttccgca tcgccgcaat aaaaatcaaa ggattgcggc agtttttcag
     5221 ccagttgggg ctgcacatcg cacaaatcat taaataacca ataattcgct gaaatctgtt
     5281 tttgcagcaa ggcactcaac attcctgagc cacagcccaa ttccaacacg ttttccaatg
     5341 gcatatccgg caaataatct tgcaaatgcg ccattaaatt aatcgtcatt ttttgttgga
     5401 ttaaggcgtg ccggtcataa tcgtttaatg ctttttggaa agcctgccga atgcgcgatt
     5461 tatttatggc agtcagtgat tccatagtgc cgaccaatgg gtgaatcttg aaaacaggta
     5521 atgtccgccg tcaatttccc gaacggtgca acgcggtgtc caatatcggt gctgattggc
     5581 aggcataaaa attttatcgc ccgatccgac caaggcattt gtccagcgaa tcaaatctgc
     5641 gcgcctatct tgcccgatca tcgcaaaaag tgcgataagt tcttgatgaa tttcgtcaaa
     5701 cggacgggcg ggaaattgtt ggtaatcttc aaaagatgct ttatcgccac acattctgcg
     5761 ttcaaatttt aaacgggtgt tttccgtgag gttctccaat gtgcctttaa aaacggcgca
     5821 agggataccg aaattatcat cgcaaggcaa acctgtgcca ttcactgccg ttgcggattt
     5881 taatcttatt ccttgcaatg ccctctctgc cgcccaaacg cccattgacc acgccaccaa
     5941 acggatgtgc cgataggcgg aaaaatcaaa atccaaattt aaatcttgat aatcatagca
     6001 aatcaataaa tcgtgatttt ccggcaaaat caaatgattt acagcatcgg gcggcgttcc
     6061 ccaacctgca aaatacagga ttaaatgtcc gccttgatga ttgtaaaatt ttgttttcat
     6121 atcatatcct tacaggcaca ccgcaaactg ccgcacttca tccgttgtca tatctgccgt
     6181 taaagacagg cggattctgg atgtgttttt gggtactgtc ggtggtctga tgggcaggca
     6241 ataataaccc tgcctttgca ggtattccgc tttggcaagg gtggcttcat tcccgcctaa
     6301 aatatagggg acgatacagg tttggctcgg cattatttgc gtccgatgcg ccacttcccg
     6361 ccgtaaaaat gcgcttaact gctcaagatg gcttctttct tttgagaatt gcggcaatcg
     6421 ttcaaaaata aaataagtcc aagccacatt aaacggcggc aatgcggttg aaaaaatcaa
     6481 tgggcgcatt tgattaatca aacattcttt caatacttgg ttgcagacgg catacgcccc
     6541 caccgaggct aaggctttac cgaaagtgcc gaccaataaa tcaatctcgg caatcaaatt
     6601 atcccgttcg gcaatcccca atccgttttg cccataaaca ccgattgcgt gggcttcatc
     6661 cacataaaga taagtattgg gaaactgttt ttttaattgg acaagctgtt tcaaatccgc
     6721 cacatcgccg tccatactga aaacagattc ggtaacgata aaagtgcggt caaattttcc
     6781 gacgtttttt tcaagcagat ttttcaaatg ttcataatca ttatgacgat aacgggaaaa
     6841 cgcacaccgg ctcaaacgga tgccgtcaat catactggcg tgaacaaatt tatctgccaa
     6901 aatcaaactt ttcgtcgtcg tcaaagcagg caaaataccg agattggcgt gatagccgct
     6961 gttgaacaat aacgcgcttt cccgttggaa acgttgtgcg acaagctctt ccaaatcggt
     7021 ataaatagga aagttgcccg ttaataaacg cgatgaagaa ctggtaaaag agggaaaatt
     7081 accgccgtat tgctgcaaaa aagaccggcg caagttttca tctgatgcca aacccaaata
     7141 atcattagac gacatattca gcattttgcg gttttcccgc gtaatatacc gcccttgatg
     7201 aatcaaatcc ggaatcgaac gatattggtt ttgcgcgccg agttgttcaa gctgttgttt
     7261 aaaaaccttc attatgatgt aaatattcct gagttaaagc ctgaaccaac ccagcatcaa
     7321 acaatcaagt aatgcccttt taataaaaac cgttttgccg ccgacctttg ccacacccct
     7381 gccttcataa tccaaggcgg aaatttccgc gacatttgtt tccgttgcca ttacccaatc
     7441 cgtccgcact gtaccgaagc gcatattttc gcacaaattg gtacggtttc aggtatgatt
     7501 tgccgaaaac ctatcggaca cacaccatat tttgatatga ataaaacaat ctgccgcact
     7561 gctgcactat tgataagcgg tttttcatac gcaaacaccg tcattcccga tgtctccccc
     7621 gtcgcacaag gtcaacatgt cttcattaac atccctcagc aacgcctgtt cctctacacc
     7681 gacggcaaac tgaccaaggt ttatcccgtt gcagtaggtc gggcgatgac gcaaaccaat
     7741 ctaggcgaac ataaaatcgg tgcgaaagcc tataaccctg tttggtacat ccccaaatcc
     7801 atacagaaag aacgcggcga cggcgtaaaa accatagccg ccggcccgga caaccctttg
     7861 gggccggttt ttgtccgctt aggcgaccct aaactcggtt tgggcataca cgggaccaat
     7921 gcgccggcca gcgtccccgg ggttcggagt cacggctgcg tccgcatgaa atcgcccgac
     7981 gcgctcgagt ttgccaaaac catcgccagc ggctcgcccg cctccgtcat ctatcaaatg
     8041 gcgggtctca atgaagatgc ggatcgcaac ctgtggcttg ccgccttccg cgacccttac
     8101 ggtaagaaca accttgacat cgcctctctg aaaaaaagta ttgcgcaatg ggcaaaaaca
     8161 cagggtaaaa ccatcgcgcc cgagaaagtc gatgctgtac tcaaagaccg caccggatcg
     8221 gccgtctgcc tgacctgcgg caaaaacggc aagatgaaga tgccgctcaa atcgctggcg
     8281 tggatacagg gttcttcctc atacagccaa gctgaagtca ttgaacaaac tgaggaaacc
     8341 aactctgccg aaatatccga gacacgcacg cccgaagtgc ctgatgtaca cacgcccgag
     8401 gcacaaccgc atttaaatac ccaatccgac ggcacgccga ctgcctatac cgaaccggct
     8461 gccgattcat cgccgcaagt agaaacacct gatcaggctg cttccgagcc ggttgatgta
     8521 ttattttcaa tagatgtgat acggcaggga aatttgcgtt taggtaaggg aaatttgcgt
     8581 ttaggtaatt gaataacctt ctgattattt aatgcttatg tttatcagaa gttgataggc
     8641 ggtttggttt ttgtttggct tttcctacac cgccgcctgc cgctttctgc aacattcaag
     8701 cgcacaaata tgccatctga aggctttaga cggcatattt cacgataata gtcgcccaat
     8761 caaataaaca cagattggaa atttatttta tttttccctt accaataccc cagaactttc
     8821 caccaaatgc tgccgataac gaaaaaaatc agaaaattga ctacgctcat gataaaaccc
     8881 gccttccacc attctcccat tgtggtgtag cccgaaccga aaatcacagg cgaagtaccg
     8941 gtcgcataat gagtgagggt catcataatg ttggatgcgg ccgccatcat cagcgcggtc
     9001 ggcatcgcag gggcattcag tgaaacggca gcagcgagaa atgcgccgaa catagcggta
     9061 atatgtgcag tagtactggc aaacatataa tgcgcataca tataagcaag cacgaggatt
     9121 acgcccgcag ccgtgccgct aacgcccaaa ccgccgacac tttccgccaa cactccggag
     9181 aaccatttaa tcagtccgag tttatttaaa aatgcggcca tcataatcaa tgcgccaaac
     9241 caaataatcg tatcccacgc acttttttct ttcaaaacat cgtcccaagt caatacaccg
     9301 gaaagcaaaa gcaggcttaa tccgataaat gcggtggcgg tggcgttgat actaaaagcg
     9361 tgattgccgg taataagggc gggaacatct gcccacaaca gcaacaagat accgaaaatg
     9421 accgccataa tgatttcgtc tgccgacatt ttacccatct ccctcagacg gtctttggca
     9481 aattgaacgg cattgggcgt ttctttaatt tcaggcggat acaaaaaata taaaatcaaa
     9541 ggcataacga aaaaggcgat aacgccggga acagccattg cccacgccca cgccccccaa
     9601 gaaagacgga aactactgcc taaattttcg gcaatcaagt tgacgattaa agggttgggg
     9661 gcagttgcag taataaacat agccgacgaa atgggattgg aatgatagtt gaccaaagcc
     9721 aaatatttac ccatcttgcc ttctgtgcct tttgcgggat tggagccgta actgccggca
     9781 atcgactgca taatcggatg tataatgccg ccgccgcgcg cggtattgga aggggtaacg
     9841 ggagccagca gcagttcgga aagagcgaga ctgtaaccga tgcccagcgt ttttcttcca
     9901 aaaacggcga taaacaaata tccgatacgc atccccagcc ctgttttgag caaaccgcgc
     9961 gaaatcataa ctgcgatggc aatcagccaa atcaacggat tggcgaacgc actcaacgca
    10021 tcgctcatcg ccgcgcccgg tttgtcggcg gttacgccgg ttactgcgac caacccgacg
    10081 gcaataatcg acagcgcgcc caacggcatg gccttgccga taatggcggc aatcacaccg
    10141 acaaacatgg ccagcagcgt ccaagcctga ggcttgaccc cgtcgggtac gggcagtgcc
    10201 aaaaccaggg cgcacaatac tgcggcaatg gcgaggggta tcggtttgaa acccaatttc
    10261 atcatattga cctccgtaaa aaagaccgtc ccgaaaaatc ggaaaaataa tatttaacta
    10321 attgttttat aagatatatt ccgatatttc accgtctttc cgatatgcgg ctccgggcaa
    10381 cttttgtttc agtatttgaa ttttcattag actgaatacg ccgtttgaac ggcacggcga
    10441 aaacccgggg gatgccggac gttcagtcct ttttcgcacc ttgaaggtaa agcatttcca
    10501 aggcaattgt ggcgccggcc aaagcggtaa tgtcggattg gtcgtaagag ggggcaactt
    10561 ctacaacatc cataccgacg atgtcgagat ccgtcagccc acgtaggatt tttaatgccc
    10621 tgtcgctgct caagccgccg catacgggcg taccggtccc aggggcgaac gacgggtcca
    10681 ggcagtcgat gtcgaaagtc aggtaaacgg gcatattgcc gacggtttct ttgattttac
    10741 ggacggtctc ttcaacactg tcttcattga ctttaggggc ggtcaacaca gtaaaaggca
    10801 attttttact gtgttcggtg cgtatgccga tttgtacgga acgggacggg tcgatgaggc
    10861 cttccttggg ggcggtatag aacatcgtac cgtggtcgta ttcgctgccg ttgtcgtagg
    10921 tgtcggtgtg cgcgtcaaaa tgaatcagtg cgagtttgcc gaaatagcgg gcgtgggcgc
    10981 gcaacaacgg tagggtaatg aaatggtcgc cgcccaaact caaacagcgt ttgccggaag
    11041 aaagtaattt gccggcgtgc gcttccattt tttcgacaaa atccctgctg tcgccaaaag
    11101 aaaaaaccaa gtcgccgcaa tcaataatgt tcaggcgttc gcgcacatca aatgtccatg
    11161 gaaacctgcg gtgctcccaa gcgaggttga cggaggcgcg ccggatggct tcaggaccga
    11221 aacgcgcgcc ggaacgccct gaaaccgcca tatcataagg cacgccggta ataacccaat
    11281 cggcatgact ttcatacggc ataaaattaa gcggcaggcg caaaaacccg aaattattgg
    11341 aaacgaggga gttgtcggtt tgtcctgcca gtgtgctgta ttgcatcgta atgattcctt
    11401 gtaattggtt tcaatcggtc gtgatgattg gtgtttgagt aagaaaatcg ggcttcagac
    11461 gacatatccg atgccttgat gcgtctattc gtcttccaaa taggtataac cattaagccc
    11521 cgcttcgagt tcttttaaga aagacatagc ctgcgaggca ggaaggtctg aatgttcgat
    11581 ttgttcgcga tagcgtttca tcagctcttt cggatcttga taaacgtatt cgagcatatc
    11641 ggcaacggtg tttccttcat cgtaatcgat gacggtaaat tgtccgtctt cccctacaac
    11701 aacatcggca gtggcagtgt cgccgaaaag attgtgcata ttgccgagta tttcctgata
    11761 tgctcccacc ataaaaaagc ctaaaagcgg cggctcttct tcgggataat caggcatagg
    11821 catcgtaccg gcgatgccgt cgccgtcgat gtagtggtca atcgtaccgt ctgaatcgca
    11881 ggtaatgtcc aacaacacgg cgcggcgcgc aatcggttca ttcaaaccgg taatgggaca
    11941 aacagggaaa agttgatcta tgccccaagc atcgggcaaa gattggaaga gtgagaaatt
    12001 gacatacagc ttatcggcaa aacgttcttg caattcgtca ataatggttc ggtgagaccg
    12061 gtgtttttca ttaaacaatt cgccgacttc atgacagata tttaaataca gttgctccgc
    12121 ccacgcacgt tgcgccaaac tcaacagccc gacattatac tgattatgca catcggcaag
    12181 atcaaactgc ccttcgtgta tccagctgcg taaggaacgt ttttcccgcg aggcggaaat
    12241 atccgtccaa gtttcccaca tactgtgcaa cacacgcggt gcttcgggcg atggcgcatc
    12301 cagccggcgc ggtttgtaac gttcaacgcc tataacatta gcaaccaaaa cggcgtgatg
    12361 tgcggtaatg ccgcgcccgc tctcggtgat gattgtcgga tgcggcagcc cgtgttcgag
    12421 acaagcctgg ctgatgcccc atacgactgt ggcggcatat tcgttgaggc tgtaattaac
    12481 ggaacaatcc gattgtgtgc ggtttccttc gtaatccacg ccaagcccgc cgcctacatc
    12541 aaaacagcgg atatttaccc ccagtttgtg caactcaaca taaaaccgag ccgattcgtg
    12601 tacacctgtg gcaacatcac ggatgttccc aagctgcgag cccaaatgga aatgcaaaag
    12661 ctgcaggcag tccagcctgt ttttttgttt caaaatatcg accagttgca aaacttggga
    12721 agccgacaag ccgaattttg atttttcccc acccgaagac tgccattttc ccgaaccttg
    12781 ggaagccagt ctggcgcgca cacccaaacg gggcttgatg ccgagttttt ccgcctcttc
    12841 caataccatt tgtatttcgg acagcttctc aatcaccaaa taaacctgat gccccagttt
    12901 ttcgcccatc aaggcgaaac ggatatattc acggtcttta tagccgttgc agacgattaa
    12961 tgtttgccgg gtgccggcgt gtgccaaaac cgccatcagt tcggctttag aaccagcttc
    13021 caaaccatgc ggttgtccgc ttgacataag cgattcgatg acgcggcggt gttggttgac
    13081 cttgataggg taaaccaaac aataaccgcc cttatagccg cactcttccc gtgccgtctg
    13141 aaaggcgcgg ttaatgtcgc ggaggcggtg ttcgaggatt tgcggaaaac aaaacaaaac
    13201 aggcaggcgc gcctgatgtt tttgttgcac ggcttcagtc agtttttgca gtgaaacagt
    13261 ttgattgtgt tgcgagggat tggggcggac gatgatttcg ccggaatcgt caacatcata
    13321 ataacctatg ccccaatgat taatgttgca cacttcacgg atggtaagga taggcataat
    13381 aaacctgctc cgtctgtcgt gttgaaaagg aatgattata acaaatcagc gtgaaatgtc
    13441 atttttttaa taagaaaagc ctgcctcata cctgatgaga aacaggcaaa atgccgtctg
    13501 aacgcttcag acggcatttt ggttcagctt tccatcaaag gaatcagcga tcgagctgct
    13561 ctttgatgat tttcaggtcg gggtaagaca acacgatgtc gtattcgcgg ccgtctttat
    13621 aggcttccac ttccaaaaca ggtttgcccc aatggtcgtc ggcatcgaca tcgtgaacct
    13681 gataaccgcg ctgttccaac attttcacgg cttttgtgcg gttttgttca aaatggggat
    13741 cgccgtaaat ctgacgctcg gcagagtcgc cggcaaatgc ggctgcggca ctcagggaaa
    13801 caacggcgac caataacagt tttttcattt tcagtccttt ttttatcggt tgattgaaca
    13861 agatgtgttt ttcaataccg ccattaaaac acagcaaaat taggtttgaa ttagagggaa
    13921 gtcaagaagc gtaaatgccg tctgaaaaaa acagagccgt caaacggctc tgttttcctt
    13981 atgcttcttt ggtttcagcc gccttttgac gcaggcgcaa actcaattcg cgcaactgct
    14041 tgtcgtccac gctgttgggc gcgttggtca gcaggcattg ggcgcgttgt gttttcggga
    14101 aggcaatcac gtcgcggata gattcggcgc cggtcatcag ggtaaccaaa cggtcgaggc
    14161 cgaatgcaag gccgccgtga ggaggcgcac cgaatttcag gttgtccaag aggaagccga
    14221 atttctcttg ttgctcttca gggctgattt tcagcgcggc aaacactttc tcttgtacgt
    14281 ctgcacggtg gatacggata gagccgccgc cgatttccca gccgttcaat accatgtcgt
    14341 aggcacgggc caggcagttt gcagggtcgg aaaccatcag gtcttcatga ccttctttag
    14401 gcgcggtaaa cggatggtgt acggcaacgt agcggtcggc ttcttcgtcg tattcgaaca
    14461 ttgggaaatc gacaacccac aaaggtttcc attcgtctgt gaagtagccg ttatctttgc
    14521 cgtgttccaa gccgactttg atacgcaatg cgccgatggc ttcgttcaca actttggttt
    14581 tgtctgcacc gaagaagata atatcgccgt tttgtgcgcc ggtacgcgcg atgatttcct
    14641 tcagggcatt ctcagacagg aattttacga ttggagattg caggccgctg tcttcgccgt
    14701 tggagaggtt gcccacatca tttactttga tgtatgccag acctttcgca ccgtagatgc
    14761 cgacaaattt agtgtattcg tcgatttctt tgcggctgaa tttcgtaccg ttcggcacac
    14821 gcagggcaac cacgcggccg cctttcatgt cggctgcgcc acggaagact ttgaattctt
    14881 ccgttttcat caggtcggtc aactcggtga atttcaagtt gatacgcatg tccggtttgt
    14941 cagagccgta gtagaacatg gcttcagagt aaggcatgcg tgggaagtcg cccaagtcca
    15001 cgcccagcgc gtctttgaag acttgtttcg ccataccttc ggtgatgtcc atgatttcat
    15061 cctcgtttaa gaacgaggtt tccaagtcga tttgcgtgaa ttcaggctga cggtcggcac
    15121 gcaagtcttc gtcgcggaag cacttggtga tttggtagta acggtcgaaa cccgccacca
    15181 tcaacagttg tttgaacaat tgcggcgatt gcggcagcgc gaagaactcg cccggatgaa
    15241 cgcggctcgg cacgaggtag tcgcgcgcgc cttcgggcgt ggagcgggtc agcatcgggg
    15301 tttcaatgtc gatgaaacct tgcgcgtcca agtagcggcg aacgcccata gcgacttggt
    15361 aacgcaggcg caggttgcgc tgcatcaccg gacggcgcag gtcgataacg cggttggtca
    15421 ggcgaacgtt ttcgctgatg ttttcgtcgt cgatttggaa cggaggcgta gcggcagcgt
    15481 tcaacacttc gatttctttg gcaaggattt cgattttgcc ggaaatcatt ttgtcgttgg
    15541 tcgtgccttc gggacggttg cgtacgcggc cggtaatgct caaaacgtat tcgttgcggg
    15601 aggaatcggc agcggcaaac gcttcgggcg tgtcgggatc gatcacgact tggacgatgc
    15661 cttcgcggtc gcgcaggtcg ataaaaatca caccgccatg gtcgcgtcga cggtgtaccc
    15721 agcctttgac ggtaacggtt tggtctaagt attgctcgct aatcagaccg caatagttgg
    15781 tacgcataaa atcacctttt attgatttaa actgaaaaca gaaaatgccg tctgaacggc
    15841 ggctttattg ttgttcgggc aaatccgcct tttcagacgg cataggtcct gccaatgttt
    15901 tgacgggcag gtcgtcaggg atgaccatac ccagcgaaat cacatatttc aacgcttcgt
    15961 ccacgctcat atcgagttcg cgcacatcgc ttttctttac cataatatag taaccgccgg
    16021 tcggattcgg cgtggtcgga acatacacgg aaagataatc gccgtccttc ggcaatgcgg
    16081 ccttaaccgc attcgacacc tgaccggaca cgaatgcgat tgtccaaata cccgattggg
    16141 gaaacggcac gagtactggt gttttaaacg aacggctgct gtcggacagc aacgattcgg
    16201 atactttttt cacactcgaa tagatggact tcacaaccgg aatccgcccc aacaagctgt
    16261 cccacgcggc aagaatctgc cggcccaata cgtttgcggc aaacaatccg gttacaaaca
    16321 atacggcaat ggcaacgata acgcccagcc ccgggatatt aaaccccaaa acatattgcg
    16381 gccgccattg cttcggcagc aggttgacga gctgatcgga cgcggaaacg atataggaaa
    16441 ccacccaaac cgttaccgca atcggcagcc aaaccaaaat gcccgtaatc agatattttt
    16501 ttaacgcctt ggcagcttta ccgccttcgg ccgcaggttc cgtcatcttg cttgattccg
    16561 acaaagtccg tacaaaccgc acattatacg cgtttgcccg gattcaaacg aaatttttat
    16621 cccgccccgc caaaccgccg gcggcttcag acggaacggc aacttgatat accgtctgaa
    16681 cacgcggttc agatgccgtc caagtcgttg aacatcaacc cgataccgat accgttctgc
    16741 ttgtggttgt agtcgatcag gctctcgccg taaccgtgga atccgcgtac cacgcctttg
    16801 agtttgccct taatcggaaa cgtgtaggcg gcttcaatcg cgccgtagcc cgttttgggg
    16861 ttgtagcgca atacggaata cacattctgc ctgtcgttca ggcggtactg cagcttcacg
    16921 tcgccatacc ccatatagtc ggcaatatcg ggattgtcgt ttttatcgcc gctctgatcg
    16981 aacgcacgca cccacacgcg cggaatcacc gtcaatttgc cccattccat gcctgccatg
    17041 gcgtaaatcc tgttccacga acgcgattcg ggacggctct gtccgttgga ctggtggaca
    17101 aaacccgcac cgagcatacg cagcctgccg ccgaacggca aatccgcctt cacaggctgg
    17161 gtcaggaaaa tttcaggttt gtaatccgta ttgcggaacg gcgcggattt cctgccttgg
    17221 ttgtaaatct gccaatcgga tctttgggtg tagccgaacc acagatccgc gcgggtttta
    17281 aacaaatctt cggcaatttt gcttttgaac gaaacctgca atttggtttc cgcacgtttc
    17341 tgctgtccga atttttcctg tacagtcgta ccgcgcgtcg gcgaactcgg ggcatagttg
    17401 ggcgaattgt tgtaccagag cggcataagg tacatcggat tgtgttcgcg tacgcccaac
    17461 agcccgcgca aatcgttttt gtccaagtcg tacatcaggc tcaaaggcgt atagatgtcg
    17521 gcggtttcgc ccgcactgtc ggcaggaagc gcatccccgc ctttttcaac aacaatgacc
    17581 gcctcgccct tatccaggct gctgcggacg gtttccgtca gattgagtac agctttcgac
    17641 tcctgccctt cctgtcctgc cgaagacgga agctgtgccg caaaaatcct gtcgtaacac
    17701 gccaaacgcg taacattgtc cgtcaaagcg gcgcattgca gcgcggtctc tccaaaagcg
    17761 gatgccatcg gcaacagtcc tgtcaaaaga atatagcgca tattccgtgt attcatctcc
    17821 gcccccattg tcggcatatt ggttttcaaa cggcatttta tagcggattc ggataaaaaa
    17881 ccgcaccctt tccgccattt cgggatttag cccccgtaat acagaaaacc ccgaaaccgt
    17941 caggcttcag ggttttccgc ttatcgcgta tcaaccgcct tggcggtttt gcaaaaatca
    18001 agccagtgct tttacttttg cagacagacg gcttttgtgg cgtgccgctt tgtttttgtg
    18061 gaacacgccc ttgtcggcga tgcggtcgat gactttgacg gactcttggt aaaccgcttg
    18121 tgcggcagct ttatcgcctg cttcgactgc tttcaatact tttttcactg cagtgcggaa
    18181 tgcggtacgc aggctagcgt tgtgggcgcg ttgtttgacg gactggcggg cacgtttgcg
    18241 tgcttgtgcg ctgtttgcca tattggaatc tcctggaaga aaaataaatt ctgtaaacgc
    18301 gcaattttaa agggggttta cattatatgc aagccttttc tctctatccg cccgtcggac
    18361 accctgacag cgcaaaaaaa cggcaaaatc gtgcggacgt tttccccctc ttttgaaaac
    18421 agggtaattt tttagggaaa tcagtccaat atcactttga gtttgcacaa atttacttta
    18481 caatgcccaa accttgcgcc ggggtgttta tggggcgcgg ggttttcttt ttttccaacc
    18541 tctttcatca ggaatctgcc cgtatgaaaa aatccgtatt agccgttttg gccgcgctgt
    18601 ctctggcagc ctgcggcggc agcgaaaaaa acgccgtgca acctcaagca gacgctgcgt
    18661 ctgctgccaa tgccgaagcc gctgccaccg atactctgaa catctacaac tggtcgaact
    18721 atgttgacga gagtacggtc gaagacttta aaaaagccaa caatctgaag ctgacttacg
    18781 acttgtacga aaacaacgaa acgctggaag ccaaaatgct gaccggcaaa tccggttacg
    18841 atttggttgt gccgggcatc gccttcctgc cgcgccaaat cgaggcgggc gcgtatcaaa
    18901 aagtcaacaa agacctgatt cccaactata aaaacatcga tcccgaactc ttgaaaatgc
    18961 tggaaaccgc cgacccgggc aaccagtatg ccgtccccta tttctccggc gtgaacacga
    19021 ttgcgattac ggcgaaaggc aaagagcttt taggcggcaa gctgcccgaa aacggctggg
    19081 atttgctgtt caaacccgaa tacacccaca agctgaaatc ctgcggcatc gccctgtggg
    19141 acaccccgag cgaaatgttc ccgattttgc tgaactactt gggcaaagac cccaaaggtt
    19201 cgaatcctga agatttgaag gcagcggcgg aagtgttgaa gtctatccgt ccggatgtca
    19261 aacgtttcag cccgtccatc atcgacgagc tggcgcgcgg cgacatctgc ctggcggcag
    19321 gcaacggcgg cgatttgaac ttggcgaaag cacgttccga agaagtgaaa aacaacgtcg
    19381 gcatcgaagt gctgaatccg aaaggcatgg gcttctggat tgagtcttgg ctgattcccg
    19441 ccgatgcgaa aaacgtcgcc aatgcccaca aatacatcaa ctacacgctc gaccccgaaa
    19501 tcgcggcgaa aaacggcatc gccgtaacct tcgcccccgc cagcaaaccg gcgcgcgaaa
    19561 aaatgcctgc cgagctggtg aacacccgtt ccatcttccc gaacgagcag gatatgaaag
    19621 acggttttgt gatgccgcaa atgagtacgg atgcgaaaaa actgtctgtc agcctgtggc
    19681 agaaaatcaa agtcggcacc aactgatttg aagcattaaa aatgccgtcc gaacatcgtt
    19741 cggacggcat tttatattgg attgaaatag aaatatttat atagtggatt aacaaaaatc
    19801 aggacaaggc gacaaagccg cagacagtac aaatagtacg aaaccgattc acttggtgct
    19861 tcagcacctt agagaatcgt tctctttgag ctaaagcgag gcaacgccgt actggttttt
    19921 gttaatccac tataccgtcg ttcccacggt caggatttca gattgcggac atctgtcaga
    19981 aaagacaaaa aaccttccgc cgtcattccc cacaggcgag aatccgatcc gttgaaattc
    20041 ggttgtttta aataaattct tacagctttg attttctgtt tttccgataa cgccgtaact
    20101 ttgaaacgcg aaagcggtaa tccgatccgt tgggattttg caacttcaaa tcaatccgca
    20161 a
//
LOCUS       DBBZXW010000026        19526 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.026, whole genome shotgun sequence.
ACCESSION   DBBZXW010000026 DBBZXW010000000
VERSION     DBBZXW010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19526
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.026"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            47..1225
                     /locus_tag="ACJJD2_000871"
     CDS             47..1225
                     /locus_tag="ACJJD2_000871"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HGG7579434.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASIASV
                     KYCVDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMEKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALAELLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(1292..1540)
                     /locus_tag="ACJJD2_000872"
     CDS             complement(1292..1540)
                     /locus_tag="ACJJD2_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HGG7579435.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(1631..2548)
                     /gene="ftsX"
                     /locus_tag="ACJJD2_000873"
     CDS             complement(1631..2548)
                     /gene="ftsX"
                     /locus_tag="ACJJD2_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HGG7579436.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESANMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPGEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(2545..3195)
                     /gene="ftsE"
                     /locus_tag="ACJJD2_000874"
     CDS             complement(2545..3195)
                     /gene="ftsE"
                     /locus_tag="ACJJD2_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HGG7579437.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(3192..3383)
                     /locus_tag="ACJJD2_000875"
     CDS             complement(3192..3383)
                     /locus_tag="ACJJD2_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579438.1"
                     /translation="MPSESASDGIFPARPSVSAKLIHYLKTGGIFIIGTVLPIVQTAY
                     PCGRNRPKRYAAHSLQDLL"
     gene            complement(3391..3873)
                     /locus_tag="ACJJD2_000876"
     CDS             complement(3391..3873)
                     /locus_tag="ACJJD2_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HGG7579439.1"
                     /translation="MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            3997..4350
                     /gene="arsC"
                     /locus_tag="ACJJD2_000877"
     CDS             3997..4350
                     /gene="arsC"
                     /locus_tag="ACJJD2_000877"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HGG7579440.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPNLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            4347..4991
                     /locus_tag="ACJJD2_000878"
     CDS             4347..4991
                     /locus_tag="ACJJD2_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HGG7579441.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGRDFFN"
     gene            5195..6589
                     /gene="gltX"
                     /locus_tag="ACJJD2_000879"
     CDS             5195..6589
                     /gene="gltX"
                     /locus_tag="ACJJD2_000879"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HGG7579442.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNADNVVYQTRRFERYKEVIAELLAKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNEKLAELVKPRLA
                     LRDIHETEKPALEDVLAQVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            6610..7005
                     /locus_tag="ACJJD2_000880"
     CDS             6610..7005
                     /locus_tag="ACJJD2_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579443.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDYAWNAVYGAGGTKASGN"
     gene            7009..7500
                     /locus_tag="ACJJD2_000881"
     CDS             7009..7500
                     /locus_tag="ACJJD2_000881"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7579444.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSATVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(7623..10217)
                     /gene="mutS"
                     /locus_tag="ACJJD2_000882"
     CDS             complement(7623..10217)
                     /gene="mutS"
                     /locus_tag="ACJJD2_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HGG7579445.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPAIHIENGRHPVVEQQVRHFTANHTNLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNELENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPRKALSELYRL
                     KDLCKSVS"
     gene            10659..11663
                     /gene="gap"
                     /locus_tag="ACJJD2_000883"
     CDS             10659..11663
                     /gene="gap"
                     /locus_tag="ACJJD2_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG7579446.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(11733..11852)
                     /locus_tag="ACJJD2_000884"
                     /pseudo
     CDS             complement(11733..11852)
                     /locus_tag="ACJJD2_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11921..12601)
                     /gene="tsaA"
                     /locus_tag="ACJJD2_000885"
     CDS             complement(11921..12601)
                     /gene="tsaA"
                     /locus_tag="ACJJD2_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HGG7579447.1"
                     /translation="MTYTIVPIATARSPYKQKFGIARQPGLVSAAEVCIELNPEFTAD
                     SVRGLEHFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            12716..13351
                     /locus_tag="ACJJD2_000886"
     CDS             12716..13351
                     /locus_tag="ACJJD2_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HGG7579448.1"
                     /translation="MIVSIDVDAQKTFTPLCPKELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHAAAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPCAKEYDY
                     CVWKGIDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGRWQVVVNEAACRGIAPETIETAWQEMHSAGAIILKNADEINKYINNQ"
     gene            13388..14356
                     /gene="waaC"
                     /locus_tag="ACJJD2_000887"
     CDS             13388..14356
                     /gene="waaC"
                     /locus_tag="ACJJD2_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HGG7579449.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG"
     gene            14583..15332
                     /locus_tag="ACJJD2_000888"
     CDS             14583..15332
                     /locus_tag="ACJJD2_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HGG7579450.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDAKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLAPADLATDILPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            15343..16278
                     /locus_tag="ACJJD2_000889"
     CDS             15343..16278
                     /locus_tag="ACJJD2_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HGG7579451.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKVDLLVAGSGASAVV
                     ESAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQANAEKLVLTFRATAFDAAAVQGGN
                     AEVINIETTPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEALKN"
     gene            16341..16952
                     /locus_tag="ACJJD2_000890"
     CDS             16341..16952
                     /locus_tag="ACJJD2_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HGG7579452.1"
                     /translation="MITTYKTITSPTQAGFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGMQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVSGLIHAYKEATAQALAIAEVIEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILEQDLQLDCRLTVSLSLANYEVCVAAWKNTRQIEVNTEKPFE"
     gene            complement(17004..17321)
                     /locus_tag="ACJJD2_000891"
     CDS             complement(17004..17321)
                     /locus_tag="ACJJD2_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HGG7579453.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            17479..18750
                     /gene="purD"
                     /locus_tag="ACJJD2_000892"
     CDS             17479..18750
                     /gene="purD"
                     /locus_tag="ACJJD2_000892"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HGG7579454.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLADLVEAAIDGKLDSVAAEWNPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            18784..19386
                     /locus_tag="ACJJD2_000893"
     CDS             18784..19386
                     /locus_tag="ACJJD2_000893"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HGG7579455.1"
                     /translation="MTDMLQTAFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
BASE COUNT         4718 a         4441 c         5463 g         4904 t
ORIGIN      
        1 cattaattgt ttctgtatcg caaacactga ttgaaaagga ctgattatgg catttttaaa
       61 actgaccgaa caaaacgtgc agggcaaaac cgtcctcatc cgcgccgata tgaacgtgcc
      121 gttcaaagac ggcaaaatca gcgacgacac ccgtatccgc gcctcgattg cgtccgttaa
      181 atactgcgtg gacaacggcg cgtccgtcat cgtgatgacc cacttgggcc gcccgaccga
      241 aggcgagttt caccccgaag acgacgttgc gcccgttgcc gcgcatttgg gcggcctgtt
      301 gggcaaaaac gtgaaagtat tgaacgactg gcgcgaaaac aaaccggctt tgaacgcggg
      361 cgatgtcgtg atgctgcaaa acgtgcgtat caacaaaggc gagaagaaaa acgatttgga
      421 actgggcaaa gcctacgctt ctttgtgcga cgtgttcgtc aatgacgcgt tcggcaccgc
      481 gcaccgcgcc caagcctcga ccgaagccgt cgcccaagcc gctcccgttg cctgcgccgg
      541 cgtattgatg gcgggcgaac tcgacgcttt gggcaaagcc ttgaaacagc ccgcgcgccc
      601 gatggttgcc atcgttgccg gcagcaaagt gtccaccaag ctgaccatcc tcgaatcgct
      661 ggcggacaaa gtcgaccaac tcatcgtcgg cggcggtatc gccaacacct tcctgttggc
      721 ggaaggtaaa gccatcggca aatctttggc ggaacacgat ttggtggaag aatccaaaaa
      781 aatcatggag aaaatggcgg ccaaaggcgg ttctgtgccg ctgccgaccg atgtcgtcgt
      841 tgccaaagcc tttgctgccg atgccgaagc ggtcgtgaaa gacattgccg acgttgccga
      901 agatgagatg attttggaca tcggcccgaa atccgccgcc gcgcttgcgg agttgctcaa
      961 agccgccggc acggtcgtat ggaacgggcc ggtcggcgtg tttgagtttg accagttcgc
     1021 aggcggtacg aaagcccttg ccgaagccat tgcccaaagc aaagcattct cgattgcagg
     1081 cggtggcgac acgctggcgg cgattgctaa attcggcgtt accgaccaaa tcggctatat
     1141 ttctaccggc ggaggcgcgt tccttgagtt cttggaaggc aaagagctgc ctgccgtagc
     1201 tgctttggaa aaacgcggcg cgtaagcggt ttgatataaa aaatgccgtc tgaaacgttg
     1261 tgctgtttct gacggcattt ttgtgtggcg gttattgtgc tttggctgcc cattccgccg
     1321 gagtggcggc aaccgaaatg gaaagtgcgt gcagttcgtt actttccagt tgggctttga
     1381 gtccgtcttt aatcaggcgg tggcgcgcga ggcgtgcctt gccttcaaat tctgatgaaa
     1441 cgatgacggc gaaaaaatgg tgtccgtcgc cttctacttc gatatgttcg cattttgcca
     1501 cgccttcaat catggctttt acttgttccg aggtcagcat ggtaggttcc ttgttggaaa
     1561 aatgcgccat tatactggca aattgaaatg ccgtctgaaa acgggttcgg acggcatttt
     1621 tgacggtgtt ttattttttg gctttgaagc cgagcaggtg ctgggtggtg gcaagccacg
     1681 cgccgaatac gcccaacgcg atgacgaagc cgaacaccag tgcgatttct cccgggtaga
     1741 agaaacgcca gccgatatta agtccgtagg gtttgaagat ggcatcgacc aaggggcgca
     1801 cggcagagag cagccaaccg caaagcccca agctgacggc ggcggaaagg atgctctgcc
     1861 acatggcttg ataaaggaat gggcggcgga taaacgacgc gggcgcgccc aagagtttgg
     1921 tgatttcgat ttcttctttg cggctgagga tttgcagtcg gatggtgttg tgcgcgacaa
     1981 ggacgaacgc catccccagc gtcagggaaa gaaaccataa gattttacgg atgaattcgt
     2041 tgatttggta cagtgtctgt acccattccg tatccatgtt ggcggattcg accataggca
     2101 gtttggtaat gtcccggtag attgcctgca tttgggcggg cgtggttgcc gggtcggggg
     2161 taacgataaa gacatccggc agggggttac cgtcaagcat ggaaatcaga ttttggtcga
     2221 gattggactg taattcttcc agaccgtctt ctttgcctat gaagcggatg ttgtcgagcc
     2281 gtttgtcgcg cgccagcagg ctgcggacgg tatcgctgtc gctttgtgcg gcggcggttt
     2341 ccatatagat tgtgatttgc ggcgactcat tgagtttgcc caacacgctt tgcccgcttt
     2401 ggatgcccaa atacataaac agcggcaggg tcatggcgac ggcgagcatt atgagggtaa
     2461 gcagtgtgcc gaaaggttgg cgcagaagct gtttgagcgc ggtgcgcgcg gattcgacgt
     2521 gcagcgagag gtagtggatg atgctcatgc gagtcgtcct ttcgagaggc gcaggatgcg
     2581 gtgtccgtag tccgccatca gggtttcgtc atgtgcggcg acgatgacgg ttgttcccgc
     2641 ttcgtggaag gttttgaaca attccataat atcgagcgcg taggcgcggt cgaggttggc
     2701 ggagggttcg tcggcaatca gcaggccggg ctggtgaacg acggcgcggg cgatgcacag
     2761 gcgttgttgt tcaccgccgg agagggttac gggatcgtcc aattctcgtc ctttcaggcc
     2821 gactttttcg atggcgatgc gggcacgctc ttcggctttg cgcggcggat agccgataat
     2881 ccgaagcggc aggatgacgt tttgcaggac gttgcggtcg tagaggattt tgtggtcttg
     2941 gaacacgatg ccgatgtgtt ggcgcataaa gccgatttgg ttgtcggaca atgtgccgag
     3001 gtcctgcccg ttaaacagga ttttgcccct gctcggcttg gtgatgcccg aaatcagctt
     3061 gaggacggtg gatttgcccg aaccggagtg tcccgcgata aatatcattt cgcctttgtt
     3121 gatttggaag ctgacgtttt tcagggcttc aaaaccgccg ggataggttt tggaaacttg
     3181 ttcgaaacgg atcataggag gtcctgtaag gaatgggcgg catatcgttt cgggcggttg
     3241 cgtccgcagg gatatgccgt ctgaacaata ggtaagacag tgccgattat aaagattccg
     3301 cctgttttta gatagtggat aagtttggcg gataccgaag gtcgggcggg aaaaatgccg
     3361 tctgaagcgg attcagacgg catccggcgt ttaacggcat tttgaatggg cgagtttgac
     3421 ggcttcggtc aggctttttt cgttcacttc cccggtaatg gtttgtttgt atccgcattt
     3481 cggggcttcg acgacggtaa agggcagtac gccgacattg tttccgtagg atttcataaa
     3541 gtttcggctg ttcgccccgg tgtaacgcca aatcgggtag gaaacagggg tttgcttgag
     3601 gaagttgccg atattgtcgg atgtgtcgag cgcgatgccg accatatcga cactgccttt
     3661 tttctgcgct ttgtaccatt tggacatggc aggcatctct tttcggcacg ggccgcacca
     3721 ggttgcccaa aggttgacga tgcgtacggg ggctttgagt gattgcaggc tttgcggggt
     3781 gttgtctttc catccggcca gttcgtctgc cgaggcggta tgtgcggcaa atgtggcggc
     3841 aagggtgatt gcggcaagat tcaagtattt catcgttttg tcctttgtat gtcgattcgg
     3901 gtattgtaaa ccgtttggta cggttgtagg cgggatattg agtaaaaccc tgtgtaagcc
     3961 gataataagg ggattgtcga gaagtaagga aatgtcatgt ctgaaatcaa aattttccac
     4021 aacccccgtt gcagcaaatc gcgtgccgcc ttgtccctat tggaagaacg cggcattgct
     4081 gccgaagtgg tcaaatattt ggatacgccg cccgacttgt ccgaattgaa ggatattttc
     4141 aacaaattgg gcttggcatc ggcgcgcggg atgatgcgcg tgaaagatga tttgtataag
     4201 gaattgggtt tggacaaccc caatttggac aatgacgcgc tgctgcgtgc catcgccgat
     4261 catcccgccc tgttggagcg tccgattgtt ttggcgaacg gtaaggcggc tgtcggcagg
     4321 ccgttggaaa atatcgaagc ggtattgtga acaaacggct gttttgcagc cgcaacggct
     4381 tgcgctatta cctgttgggc ggtttctgtt tgagtgtttt tccgtttttg ctggtgtttg
     4441 cctcatccgt ttgggcggtt tatcggacgg gcgggcaggt tttgccgccg tatgtccggg
     4501 cggatgccgc gctggtgttg ggcgccgccg cgtgggacaa acgcccttct ccggtttttc
     4561 gggaacgcat caaccacgcc atcgcgcttt atcagagccg cagggtaggc aaaatcgtgt
     4621 ttacgggagg gcgaaccaaa aaaggctata tgaccgaagc cgaggtcggg cggcggtacg
     4681 cgctcaaaca gggggttccg gcgcgcaaca tcctgtttga aaacacttcg cgcaacactt
     4741 atgaaaacct gaacaacatc cgtccggttt tgcgtgccaa cggtattgcc agcgtggtga
     4801 ttgtcagcga tccctaccat ttggcacggg cggcggaaat ggcggaggat ttgggtgtcc
     4861 gcgtttatat gtctgccacg ccgaccacgc ggtttgatgc gggaaataag aaaaaaatct
     4921 ttatgctgca agagggatat gcgttatccc tctaccgttt ggaaaaatgg gggcgggatt
     4981 ttttcaatta gctgtttcat tgaacttttt tttggacgca atcccgaaga aatccggtcg
     5041 gcggcgcgtg atacactgtt ccgcgtgccg aagcattgaa aacaaggaaa atgccgtctg
     5101 aaacttatcc gcaggcaggg ttcggacggc atttttaatg cccaagcacg gtaaaaacag
     5161 taaaataagc cgttttaaag attctggagc catcatgacc gtcaaaaccc gtttcgcccc
     5221 cagccccacc ggctacctgc acattggcgg cgttcgcacc gccttgtttt catgggcgtt
     5281 tgcccgccat cacaaaggcg agttcctatt gcgtatcgaa gacaccgact tggcgcgttc
     5341 caccgccgaa tccgtcaaca tcatcctcga cggcatgaaa tgggtcggtc tcgattacga
     5401 taacgccgac aacgtggtgt accaaacccg ccgcttcgaa cgctataaag aagtcatcgc
     5461 cgaactcttg gcaaaaggcg atgcctacta ctgctattgc agcaaagaag agctggaagc
     5521 gatgcgcgag aaagccgaaa aagaaggcac ggcgacttac gaccgccgct ggcggccgga
     5581 agcaggcaaa accctgcccg aaatccctgc cggcgtgcaa cccgtcgtcc gcttcaaaac
     5641 gcctttggat ggcgtaacca agtggacgga cctggtcaaa ggcgaaattt ccatccccaa
     5701 cgaagccctc gacgacctga ttattgcacg cgccgacggc acaccgacct acaacttctg
     5761 cgttgtcgta gacgactacg acatgggcgt tacccacgtt atccgcggcg acgaccatgt
     5821 gaacaacacc ccgaaacaaa tcaacatctt aaaagccatc ggcgcaaacc tgcccgaata
     5881 cggtcatctg cccatgattc ttaacgaaca aggcaaaaaa atctccaaac gcagcggcga
     5941 tactgttgcc attaccgatt tcggcgcgat gggtatcctg cccgaagcca tgctcaacta
     6001 tctggcgcgc ttgggctggg cgcacggcga cgacgagttc tttacgatgg aacaattcat
     6061 cgaatggttt gatttgaaag acgtttcccc gtccccaagc cgtatggatt tgaaaaagct
     6121 ctattggatc aacggcgaac acatcaaaat cacgcccaac gagaaactcg ccgaactcgt
     6181 caaaccgcgt ctcgctctgc gcgatatcca tgaaaccgaa aaacctgcgt tggaagacgt
     6241 gttggcacag gttaaagacc gcgcccaaga tttgaacgcc ttggcagacg aatgtctgta
     6301 tttctacaaa aaacaagtcc ctgccgaagc cgatgttgcc aaacactggg acgacgaagc
     6361 cgccgctcgt atgctgcgct ttgccgaacg cctcgagggt ttggaagact ggaatgccga
     6421 agccatccac gacctcttca aacctttctg cgacgaagaa ggcatcaaaa tgggtaaact
     6481 cggtatgccc ctgcgcctcg ccgtctgcgg tacggcgaaa accccaagcg tcgatgctgt
     6541 gttggcatta atcggcaaag aagaagtgtt gaaacgcatc cgcgcttaag ttatccacag
     6601 gcgtgggcga tgccgtctga tgtcggaatg cggcttcaga cagcattcaa acggaagttg
     6661 aacatgaaaa aaatattgta ttttctgatg tttgtttttt ctacaagcgt atgggcgggg
     6721 gatgcggaag acaatctgct cagcatccaa tccggctatc gtgccttact gcaaaaacaa
     6781 aacaatctgg acggaaaaat catcgggatg cagtcggatt tggaagatgc gcgccggcgt
     6841 ttgcagacgg ctcaggcaga catcgcccgt ttggaagcgg aaattcctgc agcaatggcg
     6901 caaaaagccc ggcaggctga agagctgagg caaatcggag tgcgtttgga ctatgcttgg
     6961 aatgcggttt acggcgcagg gggaacgaaa gcgtcgggga attgaccgat gaattccctc
     7021 tttgtggaca atactgtttt cattacacgg ctgaaagccg ggcatatcgg caggttggtt
     7081 caggcgttgt ttgaggagtg gcacggattt gaaccgtggt cttctgtgga taagattcat
     7141 gcctattacg gcaggtgttt gaaggatgac gaactgccgc tggcttttgc ggctgtggat
     7201 gattccggaa ccctgttggg ttcggctacg gtcaagcggc atgatatgga aagttttcca
     7261 cagtatgaat attggttggg tgatgtcttt gttttacctg aatatcgcgg aaaaggcatt
     7321 ggcaggaggc tggtcgccca ctgcataggc gcagcgcgtt cgctggggat aaagttcttg
     7381 tatctttata cgcctgatgt gcaaatattt tatgaatcat tcggctgggc ggttgtcggg
     7441 cgacatttcc ataacggtga atgggttacg gttatgcgtt tggatatgga taaggtttaa
     7501 gccgaatgga caaatgccgt ctgagctgtt cggacggcat ttttatgttt ggaaacttct
     7561 tgtcagataa tgtttatcca cagatttttc catatggttt gatgctgttc cgccaacgga
     7621 aattaagata cggatttgca caaatctttc agacggtaca gttctgacaa tgctttgcgc
     7681 ggggtcaggc tgtcgggatc gagtttttcc aaggctgctg ccaatatacc ttcaaaatgt
     7741 ttttcctctg ctttatccac aaagttgccc acattcggtt catctccttt ttcagacggc
     7801 atggtactga aaatatccag ttggggacgg ttcgcggcgg cttggttttc cagttcgttc
     7861 aaatgctttt gggcggattt caatgcgcgt acaggcaggc cggcgagttt ggcgacggca
     7921 atgccgtagc ttttaccggc gggacccggt tggatttggt gcaggaaaac gatgtcctgt
     7981 ccctgttcga gcgcggaaag gtgcatattg acggcggcgg cgtgggcttc gggcaggtag
     8041 gtcagctcga aatagtgggt ggcaaacagg ctgaaggatt tgtttttttg cagcaggtgt
     8101 tcggcaacgg cgtgcgcgag ggcgaggccg tcgaaagtgg aagtgccacg tccgacttcg
     8161 tccattaaaa caaggctttg ttcggtggcg tgatgcagga tgtaggcggt ttcgctcatt
     8221 tcgaccatga aagtggagcg gttggaggcg aggtcgtccg atgcgccgat gcgggtgaag
     8281 atttgatcga tgggcccgat tgtggcggca tcggcaggca caaaacagcc ggtgtgtgcc
     8341 aataaaacaa tcagcgcgac ttggcgcatg taggtggatt tgccgcccat attggggccg
     8401 gtgagcagca tgaggcggtg tttgtggtca aggttggtgt ggttggcggt gaagtggcgt
     8461 acctgctgtt cgacaacggg atggcggccg ttttcgatgt ggatagccgg atagtcggca
     8521 aactcggggc ggacgaagtt ccgctctttt gccaaggctg aaaatgtgga caatacgtcc
     8581 agcgcggcgg cggctttggc ggctttttga agctgcggca atgccgtctg aaggtttttc
     8641 aatacgccgt caaagagttg tttttctaag gcgagggctt gctcttgagc agtcagcact
     8701 ttgtcttcaa aggctttcaa ctccggcgtg atgaagcgtt cggcgttttt gagggtttgc
     8761 cggcgttggt agtcggcagg tgcttgttcg gcttgggttt tggacaattc aatgtaaaag
     8821 ccgtgaacgc ggttgaactc gactttgagt gtggacaaac cggtacgttc gcgttccttg
     8881 gcttccaaat ccagcaaaaa ttcgtcgcca tggttttgaa tgcggcgcaa ttcgtccagt
     8941 tcgggatgaa aaccgtggtt gatgacattg ccgtctttca gccagacgga aggttcgggc
     9001 aaaatggctt ggcggagctg ttcggctgtg gataggtttt ccgggaaaac ggctttgagg
     9061 gtttccaaca ggctgctgcc gtttgcggac aagtcgattt gtgccaactc gaacagactg
     9121 tcgcgtaaag atgccaaatc gcgcgggcgg gcgttgccga cggcgatgcg ggcagcaatg
     9181 cgttcaatgt ccgcaatgtt tttcagacgg cattggaggg gtttgtattg gctttccagc
     9241 gcggcaacgg cttcttggcg cgctcggatg tgggcgcggt tgcgtaaagg gtggtgcagc
     9301 cagagagcca agaggcggct gcccatatgg gtagcgcaaa ggtcgagcgt ggacatcagg
     9361 gtcggcgatt ttttgccgga gagggtttgc gtgatttcga gattgcggcg cgtggcagca
     9421 tccataccga tatattggct gtcggtttcg agcgacaggc cgtccaaatg ttgcggcatc
     9481 aggttttgcg tcagacggat atagttcaac agtgcacctg ccgcgccaat cgcaacggcg
     9541 tgttctttgc cgtccaaacc gaagccgcgc aaatcctggc agccgaaata ttccgtcagc
     9601 agtttttccc ccgcgtcggc ggcaaactgc cacgcgttca ggcgcgtaac acccgatgcc
     9661 gtctgaagtt gcggtgcgtt tttactgtcc ggcaacagaa tttccgccgc ctgcaggcgc
     9721 gccagttcgt cgtccaattt atccacagtt gtcagcttgg ttttgaattc gccgctttgc
     9781 agcgatgccc acgccaaacc gatgtatttt ttgtcggggg acacggcaac gatacggttg
     9841 gtttccttgt cttccagcaa tgcggaatcg gtcagcgtgc cgggcgttac gatgcgcacg
     9901 actttgcgct ccacaggccc tttgcccgcg ccgacttcgc cgacctgttc gcaaatcgcc
     9961 acgcttttgc ccaacttgac taggcgcgcc agatattgtt cggcggcgtg aaacggcacg
    10021 cctgccattt tgaccggctc gccatccacc tgtccgcgcg tggtcagggt aatatccaaa
    10081 agttttgccg cttctaccgc atcgtcgaaa aacatctcgt aaaaatcgcc catacggtaa
    10141 aacaccagtt tgtcggtatg ttgcgctttg atgccgaggt attgctgcat cattggggaa
    10201 acggcggatt tggacatggg gctgccttat cattaggaaa acggtattgt agcaaaaggt
    10261 tttgtcttcg acggaatgag actgaccgta agcctgtcaa taaggttgtg gagacaacta
    10321 ggaaaacagc aaagttatcc acagaaatat tattaagtca aaaaacatcc acgcttatct
    10381 gtcttataca gcaagtctta aactcaaact tatttgacaa aaagataatg aaaatattgg
    10441 atatttgcta cttacgcaca agcaggttgg caatcatcaa aatcatcatt aaaatttaaa
    10501 ttcaaatatt gatggtaaag gttttggaaa tctgtgcaaa cagcaaaatt catctatatc
    10561 aaataagcgt caagtagtta gatgtaatag tggaatgtaa ctttatttca gaatacaatg
    10621 caggcatcgg actttatttc acaacctgga gacaaaatat gagcattaaa gtagcgatta
    10681 acggtttcgg ccgcatcggc cgcctcgcat tgcgtcaaat tgaaaaagcc cacgacatcg
    10741 aagtcgtcgc cgtcaacgac ctgacccctg ccgaaatgct gctgcacctt ttcaaatacg
    10801 acagcacgca aggccgtttc caaggtactg ccgaattaaa agacgatgcc atcgtggtaa
    10861 acggcaaaga aatcaaagtt tttgccaatc cgaatcccga agaattgcct tggggcgagt
    10921 tgggtgtgga tgtcgtcctc gaatgtaccg gcttctttac caataaaacc aaagccgaag
    10981 cacacatcag ggccggcgcg cgcaaagtcg tgatttccgc acccggcggc aatgatgtga
    11041 aaaccgtcgt atatggcgta aaccaagaca ttttggacgg cagcgaaacc gttatctccg
    11101 ctgcttcctg caccaccaac tgccttgccc cgatggcggc agtcctgcaa aaggaattcg
    11161 gcgtagtcga aggcctgatg accaccatcc acgcctacac cggcgaccaa aacacccttg
    11221 acgcgccgca ccgcaaaggc gatttgcgcc gcgcccgcgc cgccgcgctc aacatcgtgc
    11281 ccaacagcac cggtgccgcc aaggccatcg gtctggttat ccctgaattg aacggcaaac
    11341 tcgacggctc cgcccaacgc gtccctgttg ccaccggctc gctgaccgaa ttggtttccg
    11401 tcctcgaacg ccctgtaacc aaagaagaaa tcaacgccgc gatgaaagcc gccgccagcg
    11461 aatcttacgg ctacaacgaa gatcaaattg tttcttccga cgttgtcggc atcgaatacg
    11521 gttcgctctt cgatgcgacc caaacccgcg tgatgaccgt gggcggcaaa caattggtga
    11581 aaactgttgc ctggtacgac aacgaaatgt cctacacctg ccaactcgtc cgcactttgg
    11641 aatactttgc aggcaaaatc taaggcttga acaaacctgt ggataagtaa atgccgtctg
    11701 aacacattgc gttcagacgg cattgtttat ctgtatagtg gattaaattt aaaccagtac
    11761 ggcgttacct cgccttgccg tactatttgt actgtctgcg gcttcgttgc cttgtcctga
    11821 tttaaattta atccgctata acttgatatt gcggcttatg gcgaacaaac aacagccgtt
    11881 tgttcaactg ctatgcggca aaaccggatt tttgcccgat ttaaagcggg gttggggaaa
    11941 gatcaataac ggttgcacgg ttttcctcga tttgaaatct gacttcgtaa tctgcaatat
    12001 tcatcacata aatccgttcg ggaatattct gataggcggg gcgcggatct tgggcaatgc
    12061 tttggctgat aaggtttttg gtgtttgcag ataaattttc cgcgccgatg ttttcctgcc
    12121 aaacgacttc caactctacg ggtttgccgc tgacgaaacc agatgcggca tcgggtttgg
    12181 attcgacaaa ggggatataa ggcttgatgt ccacaatcgg cgtgccgtcc agcaggtctg
    12241 cgccgctgca atagaggcgg acgggtttgc cggtttcgat gcgttcgagt ttcaggagcg
    12301 agagtccgag atggttgggg cggtgggggc tgcgcgtggc gaatacgccc attttttgtt
    12361 tgccgccgag ccgtggcggg cgcaccattt gtgcccagcc ttcatccaat acgccgtgaa
    12421 aaataaaact tatccacaca tagtcgaagt gttccagtcc gcgtacgctg tctgcggtaa
    12481 attcgggatt cagctcgatg catacttctg cggcagagac caaaccgggc tggcgggcga
    12541 tgccgaattt ctgtttgtag ggcgatcggg cggtggcgat agggacgatg gtgtaagtca
    12601 tgaggattgt ggataagttt ttcggaaaaa ccttatctta tcacagcctg ttttaccgct
    12661 tttgggcagt aatttgttat aatacagggc attttaattg cgttgaaatg atgagatgat
    12721 tgtttccatt gatgttgatg cacaaaaaac ttttacgcct ttgtgtccta aagagctgcc
    12781 tgtaaacgag gggcatttga ttgtcgaaga attgaatgcc caagccgctt tggcggattt
    12841 gcgcgtgatg acgaaagatg cgcatcatgc ggcagcaaaa tggcttgtgg ataaccctgt
    12901 tgatatgttg aagccgacag gtttgcccga tgcggatttg acttgggtgg ctcatgcgat
    12961 ggttggtacg cgcggctatg aattgttgga cgggctgcct tgtgccaaag aatacgatta
    13021 ttgcgtttgg aaaggtattg atcctgaatt gcatccttac ggcgcgtgtt ttcacgatat
    13081 tgaggaaaaa ctaagcacag ggctgattga atggctgcgt tgtcaaaata cggatacggt
    13141 tattatcggt gggttagcta cggattattg tgttaaaaca acggttttgc agttactcaa
    13201 aggcggtcgt tggcaggttg tcgtcaatga agcggcttgt cggggtattg cgccggaaac
    13261 catcgaaaca gcatggcagg aaatgcattc tgccggggca atcatcttaa aaaacgctga
    13321 tgaaataaat aaatatatta ataatcaata agttaaaatt gtttcacgtg aaaccccctt
    13381 cctaaatatg aaaattttgc ttgtccgctt gtctagtatg ggcgatttaa ttcacacttt
    13441 gcccgcaatc gaagatttgg cgcgacaatg tcctgatgta gaactgcatt ggctatgtga
    13501 ggctggattt gcagatattg cgcgcctgca tccgtttgta aaaaaaatcc atgtgatgaa
    13561 atggcggcaa tggcgcaaac atctctttcg ggctgaaact tggcgggaaa tgggtcatct
    13621 gaaacagact ttgcggcagg aagtatttga tttcgtattg gacagtcaag gtctgattaa
    13681 aagcgcgtgt ttcgctaaaa tggcgaaatc ccctatttat ggtttggata aaaacagtgc
    13741 gcgcgaggga tgggctgctt tggcgtatgt aaaaacatac gctgtaccga agggaaaaaa
    13801 tgccgtttgg cgcaaccgtg aactgtttgc ccaagtattt gggtatgtaa tgccggaaac
    13861 gcaggtattt ggcttgactg ttcctgaagc aggccgtctg aaaaatttag cgcagccgta
    13921 ttatgcggct ttgcatgcga ccagtcggga cagtaagtta tggcctgtgg aaaactggcg
    13981 gtcgttgctg caaaagttga atgaagaaca gcaatgcaat atttacctgc cttggggaaa
    14041 tgaagatgaa aaaacgcgtg ccaaacaaat tgcagacgga ctgccgtttg ctattgtgtg
    14101 cgacaaaata aatttattgc aggcagcgta tctgctgaaa tacgcggtcg gaattgtcgg
    14161 cgtggatacc ggtttgctgc atttggcaaa tgccttggaa aaacctgtgg tcggcattta
    14221 taccgatacc gatccgatta aaacaggcgt tcaggtttcg ccaattgcaa aaaatttggg
    14281 caatatcggg cagattccga ccgcagattt ggtttatcaa gcgctgatgg attgtgttgc
    14341 agcagacaaa ggctaaaggg ttgtctgaaa ctgatatggc ggcatgatat tttccaattt
    14401 attaaataca ggaatgtgta tccgctagtc tgagtaaatg ctttaaaaat ggtataatcg
    14461 gcaagcatta tccgaaagat ttttgaatga attcgttttt aaggaaaacg gatttggttt
    14521 tatagggaag aaggtttggt ttcgctggat ggtgaaagca gcgttctttt taggagggtt
    14581 caatgaaagc actggtcgca gtaaagcgcg tagtggacta caacgtcaaa gttcgtgtaa
    14641 aagccgatgg ttcggatgtg gatatcggca atgtcaaaat gtcgatgaat ccgtttgacg
    14701 aaatcgctgt ggaagaagcc gtccgtttga aagaagccgg aaaagtaagc gagatcgtag
    14761 cggtttcttt gggcgaaaag aaatgcgaag aaacgttgcg taccgctttg gcgatgggtg
    14821 ccgaccgtgc aattcatgtt gaaaccgatg cgaaattgga gccgctggca gttgccaagt
    14881 tgctgaaagc cgttgcggac aaagaaaatc cgcagatttt ctttttgggc aaacaggcga
    14941 ttgatgatga tgccaaccaa gtggcgcaaa tgctggctgc tttgctgaat gcggcgcaag
    15001 gtacgttcgc gtccaaagta caaattgaag gcgacgaagt gcagattgtg cgggaaatcg
    15061 atggcggcga agaaaccatc gcattgaaac tgcctgctgt tatcagtgct gatttgcgtt
    15121 tgaacgagcc gcgctttgtc aaactcccca atattatggc ggcaaagaaa aaacctctgg
    15181 aaaaactggc gcctgccgat ttggctaccg atattttacc tcgtctgaaa acggtgaaat
    15241 ttgccgaacc taaggcgcgt caggcaggcg taaaagtagc aagcgttgcc gaattggttg
    15301 aaaaattgaa aaacgaagcc aaagtgattt gaggaggctg aaatgagcgt attgattatt
    15361 gtcgaacacg acaacaaaca gttgaatcct accactttgc atgctgttac cgctgccgcc
    15421 aagctgggta aagtcgattt attggttgcc ggaagcggtg catctgccgt agtagagtcc
    15481 gcaaaacaag tggcgggtgt ggaaaaagtt ttggttgcag atgctgccca ttatgccgaa
    15541 ggtttggctg aagagttggc tccgctggtt gttaaattgg cagcggatta ccgctatgtt
    15601 gcagcaacgg caaccacatt cggtaaaaac cttttgcccc gcgtagccgc cttattagac
    15661 gtaccgcaaa tttctgattt gaccgagatt gtagataaca cgacttttgt acgtccgatt
    15721 tatgcaggta atgcatttga aaccgtgcaa gccaatgcgg aaaaattggt gctgaccttc
    15781 cgtgcgacgg cttttgacgc agcggcggtg caaggtggta atgctgaggt aattaatatt
    15841 gaaacaaccc ctgcccaaaa cctgagtcgt tttgttaacc gtcagctttc ccattccgat
    15901 cgtcccgaac tgactcaggc aaaagtgatt gtttctggtg gtcgtgcgtt gggtagtgcg
    15961 gaaaaattta atgaagtgct gacaccgttg gcggatgttt taggtgcggc aatcggtgca
    16021 tcccgtgcgg cagttgatgc cgaatatgcg ccaaacgatg ctcaagtcgg acaaaccggt
    16081 aaagtagttg cgccgcaact ctattttgca atcggtattt caggtgcgat tcaacacgtt
    16141 gccggtatgc aagacagtaa ggtgattgtt gcaatcaata aagatgctga tgcgccgatt
    16201 ttcaatgtag ccgattacgg attggttggc gatttatttg aaatcgttcc acaattaaca
    16261 gaagcattga aaaattaatg tttcacgtga aactttcaga cgactttgtt attaatgagg
    16321 ttgtctgaaa acttttcaac atgattacga cttataaaac cattacttcc ccgacgcagg
    16381 ctgggtttaa agataaaggc agccgtttta tcgcatttgc ctatccgatt cggacattgg
    16441 ctgatgtgaa aaaatacctc gatccgttaa aggaagagca ccataaagca cgacactggt
    16501 gttatgccta tcgtttgggc gtggatggta tgcaatttcg tgccaacgat gatggagagc
    16561 catcaggaag tgctggacga ccaattttgg gacagattga ttcggtgggc atcaccgatg
    16621 ttttggtcgt ggtcgtccgc tatttcggtg gtactttatt gggcgtttca ggtctgatac
    16681 atgcgtacaa agaggcgacg gctcaggcgt tggcgattgc ggaagtgatt gaaaagaata
    16741 ttgaaaaaac cgtttggctg aaatgtgaat atccattttt gaatgaagcg atacgcatcg
    16801 ccaaacaata tcaggcggat atattggagc aggatttgca gttggattgc cgattgacgg
    16861 taagtttgtc gttggcaaat tatgaagtct gtgttgcggc ttggaagaat acacggcaga
    16921 ttgaagtaaa tacggaaaag ccttttgaat gaaaggtcgt ctgaaatgct ttgtgatggt
    16981 atttcagacg acctcttcgc tgactaatct tcttgtgtat atttgtctaa ggcatcgacg
    17041 ctggagcgca aatataacca agccagttga tggaattcgc ccagcgcgtt ccatagcgca
    17101 tcttcactca taatgctgta ttcgccttct gtgcgcaaat ccacctccgc tccatcttca
    17161 atagcccgat gacaagcctg atattcgtgg gtataaaaat tgtccatatc gcgaatcaaa
    17221 gcgacggcat gtttccaacg gcggatgtct tcttccaatt gcggtagtaa atgacaccat
    17281 tcgcggtatt tgctttggat ttcatcaata cgtttttgca tggttgcttg tcctttttta
    17341 atttgtgaat aagttgaata ggttgcagag tggaatgaag cggtcttttg tttgattcta
    17401 ctaaaatttc ttcagatggg ataaaagtcc ctttgtatcg agttttcgtt aaaagtacat
    17461 atttgtcaag gagatggcat gaaactgctg gttatcggta atggtggtcg cgaacacgcg
    17521 ctggcttgga aattggcgca gtcgcctaaa gtggaaacag tatttgttgc gcctggtaat
    17581 gccggtacag cgattgaacc caagttgcaa aacatcgact tgactgcgca tcaggatttg
    17641 attgaattct gtcgtaaaga aaatattgtt tttactgtcg tcggccctga agcgcctttg
    17701 gcggcaggtg ttgtggatga tttccgtgcc gcaggactaa aaatattcgg tccgacacaa
    17761 tatgcggcgc agttggaaag ttccaaagat ttcgccaaag catttatggc gaaatacaat
    17821 attccaaccg cgcaatatca aacctttgaa aacgccgatg ccgcacatga ttacgtcaat
    17881 cagaaaggtg cgcctatcgt tatcaaagcc gatggtttgg cggcaggtaa aggcgtgatt
    17941 gtggcgatga ctttggatga agcgcatgct gcgattgatg atatgctgct ggacaacaaa
    18001 atgggcaatg ccggcgcgcg tgttgtgatt gaagatttcc tgcaaggcga agaagcgagt
    18061 tttatcgtca tggttgatgg caataatgta ctgcctatgg caaccagcca agaccacaag
    18121 cgtcttttag acggcgacaa aggtctgaat acgggcggta tgggtgcgta cagccctgcg
    18181 cctgtggtaa cgcctgttgt gtacgaacgc gcgatgaatg aaattatttt gccgaccgta
    18241 gcagggatga aagcggaggg gcatgagttc accggtttcc tgtacgcagg tttgatgatt
    18301 gatcaaagcg gtgcacccta tacgattgag tttaactgcc gtttcggcga tcctgaaacc
    18361 cagccgatta tgagtcgtct gaacagcgac ttggcggatt tggttgaagc ggcaatagac
    18421 ggtaaacttg atagtgttgc tgccgaatgg aatccacaaa ctgccgtagg tgtagtgttg
    18481 gcggcgcaaa actatcctga aacgcctaaa aaaggcgatg ttatttccgg tctggatgct
    18541 gccaaccagg taggcaaagt tttccatgca ggtacaacgg caaacgagaa aggtgacgta
    18601 ttgaccaacg gcggacgcgt attgtgtgtt gtgggattgg gcgacaatgt ggcgcaagcg
    18661 aaagctaagg catatggcgc gttggaaaaa atcagcttcg acgggatgca ataccgtaaa
    18721 gacattgccg ataaagcgat taaccgttaa ttagaaagag gatgatgccg tctgaagcca
    18781 agtatgactg atatgcttca gacggcattt tatattatgt tatttccgag aattatcgct
    18841 gcatcagcgc aacgtaagtt aagcgtttat ttaaaaaaag gcggtttggt cgcttatccg
    18901 accgaatctt gttatggctt ggggtgtctt ccgacattag ccaaagcact cggtaagttg
    18961 gcgcatttga aaaaaagacc gcaacacaag ggtatgattg tcatcgggaa tcaatttgaa
    19021 caattgcagc ctttacttca aatgccgtct gaaaatcttc aggatatgct tagaaaagaa
    19081 tggcccgccc ctaaaacgtt cctattatcc gccaaatcct gtgtcttacc tgagttgcgc
    19141 gggaaacagc gcagcaagtt ggcggtcagg gttcccgccc atgtaggtgc gcgccgcttg
    19201 tgtcaggctt tgcaaacgcc tttggtttcg acttcgtgca accgcgcagg caaacgcgcg
    19261 tgtcggacgg agagggaagt cagaaggcaa ttcggacgcg atgtgtggat tgttggtggg
    19321 agaatcggca ggcagaaatc gccgagtcag attattgacg gggaaacagg taaacgtttg
    19381 cgttgagacc tttgcaaaat tcctttccct cccgacagcc gaaactcaaa cacaggtttt
    19441 cagctgtttt cgccccaaat accgcctaat tctacccaaa taccccctta atcctccccg
    19501 gatacccgat aatcaggcat ccggtc
//
LOCUS       DBBZXW010000027        19340 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.027, whole genome shotgun sequence.
ACCESSION   DBBZXW010000027 DBBZXW010000000
VERSION     DBBZXW010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.027"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(12..848)
                     /locus_tag="ACJJD2_000894"
     CDS             complement(12..848)
                     /locus_tag="ACJJD2_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HGG7579456.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFDERDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIRAGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGLAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGLLASAGSDFHRLNDFSGGILGACPELPENCRPVWEHFS
                     RH"
     gene            complement(1156..1557)
                     /locus_tag="ACJJD2_000895"
     CDS             complement(1156..1557)
                     /locus_tag="ACJJD2_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579457.1"
                     /translation="MAIYDLNEIVTSAALGMYKGKWQNMDFEQVLQDIVQETDFTYSW
                     EYGENWAIFCLNEKSVGMLCKQIPFAIIENEKLSQKIYQEYPWILTQQVYHFDTDKIL
                     LNKYVCKLTIGIMSAISQEPISLQDLYVDTV"
     gene            complement(1662..1865)
                     /locus_tag="ACJJD2_000896"
     CDS             complement(1662..1865)
                     /locus_tag="ACJJD2_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HGG7579458.1"
                     /translation="MDTTLKNKAEAILGEPLLDEPIRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(1843..2076)
                     /locus_tag="ACJJD2_000897"
     CDS             complement(1843..2076)
                     /locus_tag="ACJJD2_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG7579459.1"
                     /translation="MEAIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEE"
     gene            2614..6048
                     /gene="dnaE"
                     /locus_tag="ACJJD2_000898"
     CDS             2614..6048
                     /gene="dnaE"
                     /locus_tag="ACJJD2_000898"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HGG7579460.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLVAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSSDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPGQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVRDKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQMARERYARSLSLALAPHHDIGKLVQLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            6091..6345
                     /locus_tag="ACJJD2_000899"
                     /pseudo
     CDS             6091..6345
                     /locus_tag="ACJJD2_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6482..7414)
                     /locus_tag="ACJJD2_000900"
     CDS             complement(6482..7414)
                     /locus_tag="ACJJD2_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7579461.1"
                     /translation="MLSQLEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEMPSEGYPVLFVLDGEAFFPALFN
                     IMQSLMPNPVTRSNAPCLIVGIGYTTGSVRDLAQRAADYTPPLGDNATADERQQFGQA
                     DRFSAFIDSELTAFLESRYTLNRNETAVFGHSFGALFGLYSLLSHRRFRRHWLVSPSI
                     WWHNRRILDFMPSENRLNGIDVCLNIGALERGSGCKRREERDMAGLSERMAAELDRHG
                     AAVFFREYPNADHGNVSFYSLTDCVEYLRKAWQR"
     gene            complement(7484..9640)
                     /locus_tag="ACJJD2_000901"
     CDS             complement(7484..9640)
                     /locus_tag="ACJJD2_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HGG7579462.1"
                     /translation="MSVFRINMTAATVLAALSSSVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSFAATVGTKIPASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVL
                     SNDDGRSSVYARGYEYSEYNIDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSG
                     EMGGIVNLVCKRPAKAFQGHAAAGFGTHKQYKAEADVSGSLNSDGSVRGRVMAQTVGA
                     SPRPAEKNNRHETFYAAADWDINPDTVLGAGYLYQQRHLAPYNGLPADANNKLPSLPQ
                     HVFVGADWNKFKMHSHDVFADLKHYFGNGGYGKVGMRYSDRDADSNYAFAGSKLGMKT
                     PAGRPGCNTADDKACAVGLGTEIKQKALAFDASYSRPFRLGNTANEFVIGADYNRFRS
                     TNEQGRTTLYARGGLALNEFRSIPQVDLIANARKGVRGYSHTVATENLDEFGIYGKST
                     FHPADGLSLIGGGRLGHYKIESGEGKTLHKASKTKFTGYAGAVYDLNDNNSLYLSLSQ
                     LYTPQTNLDADGKLLKPRQGNQFEVGYKGSYMDDRLNARVSFYRMKDKNAAAPLNPNN
                     KKTRYAALGKRVMEGVETEISGAVTPKWQIHAGYSYLHSQIKTASNSRDDGIFLLMPK
                     HSANLWTTYQVTPELTIGGGVNAMSGITSSAGMHAGGYATFDAMAAYRFTPKLKLQIN
                     ADNIFNRHYYARVGGANTFNIPGSERSLTANLRYSF"
     gene            9800..10459
                     /locus_tag="ACJJD2_000902"
     CDS             9800..10459
                     /locus_tag="ACJJD2_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HGG7579463.1"
                     /translation="MTTPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRDLLEMPSETAIADITRTYSAHYLNPNNRNMTLFPDALPCLDKLKAQ
                     GYWLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGELGFDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLAQHY
                     A"
     gene            complement(10546..11514)
                     /gene="ispH"
                     /locus_tag="ACJJD2_000903"
                     /gene_synonym="lytB"
     CDS             complement(10546..11514)
                     /gene="ispH"
                     /locus_tag="ACJJD2_000903"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HGG7579464.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAAGIGTDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     QEVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(11544..12038)
                     /gene="lspA"
                     /locus_tag="ACJJD2_000904"
     CDS             complement(11544..12038)
                     /gene="lspA"
                     /locus_tag="ACJJD2_000904"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HGG7579465.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFAALGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKD
                     GKKT"
     gene            complement(12825..15614)
                     /gene="ileS"
                     /locus_tag="ACJJD2_000905"
     CDS             complement(12825..15614)
                     /gene="ileS"
                     /locus_tag="ACJJD2_000905"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HGG7579466.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPTGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYIGETPRVAGMRVWEANPVILQWLEETSNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCENYDKLSDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKTEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
     gene            complement(15756..16676)
                     /gene="ribF"
                     /locus_tag="ACJJD2_000906"
     CDS             complement(15756..16676)
                     /gene="ribF"
                     /locus_tag="ACJJD2_000906"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HGG7579467.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADA
                     RGLPVVAVIFEPQPKEFFASRTGRVPPCRISPLRTKLELLEGTGCIDAVWVLRFDRHF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIAADMEAAKCW"
     gene            complement(16975..18270)
                     /gene="tyrS"
                     /locus_tag="ACJJD2_000907"
     CDS             complement(16975..18270)
                     /gene="tyrS"
                     /locus_tag="ACJJD2_000907"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HGG7579468.1"
                     /translation="MSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(18332..18865)
                     /locus_tag="ACJJD2_000908"
                     /pseudo
     CDS             complement(18332..18865)
                     /locus_tag="ACJJD2_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH hydrolase domain-containing protein"
     gene            complement(19015..>19340)
                     /locus_tag="ACJJD2_000909"
     CDS             complement(19015..>19340)
                     /locus_tag="ACJJD2_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7579469.1"
                     /translation="KGTTVYADKGYDSAENRQHLEERQLLDGIMRKACRNRPLTETQT
                     KHNRYLSKIRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLS
                     APAAA"
BASE COUNT         4272 a         5282 c         5234 g         4552 t
ORIGIN      
        1 tttatccgca ttcaatgccg ggaaaaatgt tcccacaccg gcctgcagtt ttccggcagc
       61 tcgggacacg cgccgaggat accgccgctg aaatcgttta agcggtggaa atcgctgccc
      121 gcgcttgcca acaatccgaa gcgttctgcc aaaagcgcgt agttgaggcg gtcgtttttg
      181 caacagttgc cgctgtggac ttcgatgcct gcgccgccga ggtttttaaa ttcttcaaac
      241 agattgcgct tggcggtggc ggacaaatcg tagcgcatcg gatgggcgat gaccgccagc
      301 ccgcccgcgc cgttgacggc ggagacgcag tcttccagcg tcgcccattc gtgtcggacg
      361 gcgcaggatt tgccgtcgcc caagtatttg gtgaacgcct gctgcttgtt tttgacatgt
      421 cccgcccgga tgaggaactc ggcgacgtgg gtgcggctga ccatttcttt gtttgccgcc
      481 agcgcgagcg cgccgtcgta tgcgccgccg atgcctttct tttcgagctt ggcggcgatg
      541 gcttcgaggc gtttcagacg gccttgccgc acttgcgcca acaggttttg caggttttcg
      601 tcccgttcgt cgaaatccaa accgacaacg tgtatggtgc gtccgcgcca agtgacggag
      661 atttccacgc cgttaatcag gcgcaaatcg agcctgtcgg cttcggcacg cgcttcggcg
      721 atgccgccgg tgtggtcgtg gtcggtcaac gccagcagcg tgcagccgtt ttgatgcgcg
      781 aggcggacga cttcggcggg ggaaagcata ccgtcggaaa cggtggaatg gcagtgcagg
      841 tctatcatgg ggtgttatat gtgtggtgaa tgaaggtcgg ggggcaatat tgtcgggcgg
      901 tgtggcggcg gcggtcattt taaaaaacag gtgtatggca aatgcaaagg aaaagccgct
      961 atgccgtcat tcccaacccc cgaatgtgcg gatagagcca gtggggatgg gtacattatt
     1021 tgtttgcatt agttagttat cctgctgtat ccattaaatc atatgcttca attaattgtt
     1081 gttctagctc ttgtaccaat tttggattgc gaattcctaa ctcaatttca aacagcgagt
     1141 tctcactatg tacatctaca cagtatctac ataaagatct tgtaaagata taggttcttg
     1201 gctgatggca ctcattattc caatagttaa tttgcataca tatttgttta ataaaatttt
     1261 atctgtatca aaatgataaa cttgttgagt tagtatccaa ggatattctt ggtatatttt
     1321 ctgtgataat ttttcattct ctataatcgc gaaaggtatc tgtttacata acataccaac
     1381 agacttttcg tttagacaga aaatagccca attttcccca tattcccaag agtatgtaaa
     1441 atctgtttcc tgaacaatat cttgtaaaac ttgctcaaaa tccatgtttt gccatttacc
     1501 tttatacata cctaatgcgg cactggttac tatttcgttt aagtcataaa tagccattta
     1561 tgttccttgc taatttccag gtgagacatg tataggactg agaccagtat gcccattagg
     1621 tttccctcta tacacattaa tagtagatgt tggttccgtt ttcagacggc atcgtccgac
     1681 caacccgctt cttttaattt ccgccgttgc gcgtcgtagc gggccttatc cgcccaataa
     1741 atcgtctgaa tgcacgcctc gccgcagtcg ctgccgcagc attcccacga ctcggggcgg
     1801 ataggttcgt ctaaaagcgg ttcgcccaag atggcttcgg ctttattctt cagggtcgta
     1861 tccatcggca atttccaagc gtgcgccgtc aaactcgatg acttcgccgc cgcgtatttt
     1921 ggcggtttta cgggtttcgg tttcgccgtt gcgcgacacc aacccttcgg caatcaacgc
     1981 cttcgcctgt ccgccgcttt cggcaagtcc ggccaatttc aacaggtcgc acaaggcgat
     2041 gtattcgttg tcttcgagat agacgatggc ttccatgatg tccccttgca gaaagagacc
     2101 gttattgtag cacctgccgc cgccgtaccc aaaattaccg caaaaccagc gatgtatccg
     2161 caccgcctgt tccgtaaaag taaaaatgcc gtctgaaacc ccgtatgccg caatccgttc
     2221 aaagaaatcc tgcccaacgg cagactgcaa atcctgttcc ccgacgaatc cgcattgacg
     2281 ctgatgcaca tcctcaaaca cgaactgccc gatacaccgg caatcggcat caaaacgaaa
     2341 tcaaaaacct gtttgaacgt aaaattaatt taactgcttg ccatccgtcc gaataaggta
     2401 tatagttctt tataactagt ttgatagttc tttatatcta tcaatactcc ttgggaagcc
     2461 tccaccacac ggtaggaggc atttttttgc cgtcgtaaaa gctcaaaaac atttgcaggt
     2521 catgccgtct gaatccgaaa cagcattacc tacaccgcca tctaaagaca accctgctac
     2581 aatacgcctt ttattgttca cgccgatttt gccatgaccg agccgaccta catccccttg
     2641 cgcctgcata ccgagttctc aattaccgac ggtatggtgc ggattaaaaa actggttgcc
     2701 aaagcgcagg aatacggttt gcctgctttg ggcatcagcg atttgatgaa cgaattcggc
     2761 ttggtgaaat tctataaagc ctgccgcggc gcagggatta aacccatcgg cgcggcggac
     2821 gtgtggatag gcaatccgaa tgcgcccgac aagccgtttc gcgccatgct gattatccgc
     2881 aacgatgcgg gctatctgcg cttgagcgag cttctgacgg cggcttatgt cggcaaagac
     2941 cgcaatatcc atcatgcgga actcaatccc gaatggctgg aaaacggcga caacagcggc
     3001 ttgatttgtt tgagcggcgc acattacggc gaagtgggcg tgaatctgtt gaacggcaat
     3061 gaagacgcgg cgcgtgcggc ggcgttgaaa tatgcggcat ggtttcccga tgcgttttat
     3121 ttagagctgc aacgcctgcc cgaacgcccc gaatgggagg cttgcgtttc cggcagcgtg
     3181 aagctggcgg aggaactggg tttgccggtg gtggcgaccc acccgacgca gtttatgagc
     3241 agcgatgatt tcaacgcgca cgaggcacgg gtgtgtattg cgggcggctg ggtgctgacg
     3301 gacaaaaaac gtccgcgcga tttcacaccg ggccagtttt tcattccgcc ggaaacgatg
     3361 ctggagcgtt tcgccgattt gcccgaggcc ttggaaaaca cggtagaaat tgccaaacgc
     3421 tgcaatctgc acatcacatt gggcaaaaac ttcctgcccc ttttccccac gcccgacggt
     3481 ttatcgcgcg atgactatct catcaaactc tcaaacaagg gcttgcagga acgcatggtt
     3541 cagctttatc ccgacgaggc ggagcgtgcg gcaaaaatgc cggaatatca ggaacgtttg
     3601 gattttgagc tgaacatcat catccagatg aaattccccg gctatttcct tatcgtacaa
     3661 gactttatca actgggcgaa aacgcacggc tgtccggtcg ggccgggacg cggttcgggc
     3721 gcgggttcgc tggtggcgta ttcgctgaaa attaccgacc tcgacccgct gaaatacgcg
     3781 ctgctgtttg aacgtttctt aaaccccgaa cgcgtctcca tgcccgactt cgacgttgac
     3841 ttctgtcagg caaaccgcgg ccgcgtgatc gaatatgtgc gcgataaata cggcgctcag
     3901 gcggtcagcc agattgttac cttcggcacg atgtcgtcca aagcggtcat ccgcgacgtg
     3961 gggcgcgtgt tggagctgcc gtttatgctg tgcgacaaac tgtccaagct gattccgttg
     4021 gaagccaaca aacctctggg tttggacgac gcgatgaagg cggagccgca gattcaggaa
     4081 ttaatcgaag cggaagaagc ggacgaactg attacgctgg cgaaaaagct ggaagacctg
     4141 acgcgcggtt tgggtatgca cgcaggcggc gtgttgattg cgccgggcaa gatttccgat
     4201 tacagccccg tgtatcaggc ggatgaatcc gcctctcccg tatccatgta cgacaagggc
     4261 gacgtggaag acgtgggttt ggtgaaattc gactttttag gtctgcgtaa cctgaccatt
     4321 atcgaaatgg cgcagaacaa catcaaaaac accaccggcg acatcatcga tgtcggcaaa
     4381 attccgctcg acgaccaagc cgcctaccaa atcttccgag atgcgaacac caccgccgtg
     4441 ttccagttcg agtcgaccgg catgaaaaaa atgctgaaaa cggcgcacac gaccaagttt
     4501 gaagaactga ttgccttcgt atcgctctac cgccccggcc cgatggacaa catccccgac
     4561 ttcgtcgcgc gcatgaaagg ccaggaattc caatacatcc atccgctgct cgaaggcatc
     4621 ctcgcgccga cctacgggat tatggtgtat caggaacaag tgatgcaggc ggcgcaaatt
     4681 atcggcggct actcgctcgg cggcgcggac ctgctgcgcc gcgcgatggg taagaaaaag
     4741 cccgaagaaa tggtgaaaca ccgcgaaatc tttgccgaag gcgcggcaaa acaaggcatt
     4801 tcgcgcgaaa aatccgacga aatcttcaac tacatggaaa aattcgccgg ctacggtttc
     4861 aacaaatccc acgccgccgc ctacgccctg atttcctacc agaccgcatg gcttaaagcc
     4921 cactatcccg ccgaatttat ggcggcgacc atgtcgtccg aattggacaa caccgaccag
     4981 ctcaagcatt tctacgacga ctgccgcgcc aacggcatcg agttcctgcc gcccgacatc
     5041 aacgaatccg actaccgctt cacgccgtat ccggacatga aaatccgcta cgcgctcggc
     5101 gcgattaaag gcacgggcga agccgccgtc gaatccatca tcgccgcgcg gcaaagcggc
     5161 ggcaagttta ccggcctctt ggacttctgc gagcgcgtcg gcaaagaaca catgaaccgc
     5221 cgcacccttg aagccctgat acgcggtggc gcgttcgaca gcatcgaacc caaccgcgcc
     5281 atgctcttgg cgaacatcga cctcgctatg gacaacgccg accaaaaagc cgccaacgcc
     5341 aatcagggcg ggcttttcga catgatggaa gacgccatcg aaccggtgcg gctcatcgac
     5401 gcgccgatgt ggagcgaatc ggaaaaactc gccgaagaaa aaaccgtcat cggcttttac
     5461 ctgtccggcc acccgttcgg cccgtatgcc caagaagtcc gccaaatcgc cccgcagaaa
     5521 ctgtcgaaac tcaaaccgca agacagcgtg cgcctcgccg gattcgttac cgccgtacgc
     5581 accatgatgg gcaagcgcgg caaaatcgcc ttcgtcagcc ttgaagattt gagcggacag
     5641 gttgaaatca tggtcggcgg tcagacgttg gaaaactgcg ccgactgcct caaagccgac
     5701 caagtgctga ttatcgaatc caaagtcagc cgcgacgact acggcggcgg cgacgggctg
     5761 cgtattctgg caaaccaagt catgaccctg caaatggcgc gcgaacgcta cgcccgaagc
     5821 ctcagcctcg ccctcgcccc gcatcacgac atcggcaaac tggtacaact gctcgccgcc
     5881 caccaactgc ccgacacgcc gcgcatcccg ctgcaactgt cgtatgccaa cgaaaaagcg
     5941 tcgggcaggc ttcaagtgcc gccgaaatgg acggttacgc cgagttccgc attgttcggc
     6001 gaactggaaa cattgctcgg cagccggtcg gtgcgcgtca actggtaacc caaaatataa
     6061 atgccgtctg aagcccaaaa accggtttca ttcgtacttt attcgaatga ttgaataaaa
     6121 gtaactgcca agaaaaacgt attttttggt tatttcgcca gtctaaatag agcaaccggg
     6181 acgattgata tccgtgtgca tgacacagac agcaccaaag ggaaaaacgg cattttccaa
     6241 agtatcggta tcaaaaccgc cctttcactc caaaaatacc aaatcgacaa accgggcaaa
     6301 gaaatcagac cgtgccgcct gaaaaaacgc ccacccgtcc gttaaattaa cctatccctg
     6361 tttcagacgg cctgaagcag ggatttttat atcaaaataa aatgagaaag ggagcaataa
     6421 cccttaggta gctcttgtta ttttccgatg caaaacaaag cagtcatata tttaattccc
     6481 cctacctctg ccaagccttc ctcaaatatt cgacgcaatc ggtcagcgag tagaacgaga
     6541 cattgccgtg gtcggcattc ggatattccc ggaaaaagac ggcggccccg tgcctgtcca
     6601 actctgccgc catgcgttcg gacagtcctg ccatatcgcg ttcttccctg cgtttgcaac
     6661 cgctaccccg ttcgagcgcg ccgatgttga ggcagacatc gatgccgttt agccggtttt
     6721 cagacggcat aaaatcgagt atccgcctgt tgtgccacca aatcgatggg gatacgagcc
     6781 aatgccgtct gaaacggcgg tgggaaagca gggaatacag tccgaacagt gcgccgaacg
     6841 agtgtccgaa tacggcggtt tcattgcggt tgagggtgta gcggctttct aaaaaggcgg
     6901 tcagctcgct gtcgataaag gcggagaagc ggtctgcctg tccgaactgc tgccgttcgt
     6961 ctgctgtggc gttgtctcca agcggcggcg tgtagtcggc ggcacgttgt gccaaatcgc
     7021 gcacactgcc tgtcgtgtag ccgataccga caatcaggca gggggcgttg cttcgggtaa
     7081 cggggttggg catcagcgac tgcatgatgt tgaaaagtgc ggggaaaaag gcttcgccgt
     7141 ccaaaacgaa gaggacggga tagccttcag acggcatttc gccgagtgtc gccgtctgaa
     7201 tccgatagat tcgccccgtg caggtggatt tgatttcggt ttcaaaggct tggggcagta
     7261 tggcaggttg gaatgtgtcg gtcggtatgg gtttcatgat gttcggcttg tgggtcagac
     7321 tggcggcaag cggtaaaacc gaaccggcaa agcggtctgc ctgccggttc ggtctgtttt
     7381 ccttcgcaat gccatactcc agttgtgaga gcatagggta tgcagcgcag cttgttgtgg
     7441 tttgatgatg ctgcggctgc cgtttcagac ggcatattgg tctttaaaaa ctgtaacgca
     7501 ggtttgccgt caggctgcgc tccgaaccgg gaatgttaaa ggtgttcgcg ccgccgacgc
     7561 gggcgtagta atggcggttg aagatgttgt cggcgttgat ttgcagcttc agcttgggcg
     7621 tgaagcggta tgccgccatc gcatcgaacg tggcataacc gcctgcatgc atccctgcag
     7681 atgaagtaat gccgctcatc gcgttcactc cgccgccgat ggtcagctcg ggcgtaactt
     7741 ggtaagtcgt ccacaggttt gcgctgtgtt tgggcatcaa taggaagatg ccgtcgtcgc
     7801 gtgaattgga ggcggttttg atttggctgt gcagatagct gtaacctgca tggatttgcc
     7861 atttcggtgt aaccgcgccg ctgatttcgg tctcaacgcc ttccatcacg cgtttgccca
     7921 atgcggcgta acgggttttt ttgttgttcg ggttcaacgg tgcggcggcg tttttgtctt
     7981 tcatgcggta gaacgaaact cgggcattga ggcggtcgtc catgtagctg cctttgtaac
     8041 cgacttcaaa ctggttgcct tggcgcggtt tgagcagctt gccgtcggca tcgaggttgg
     8101 tttgcggtgt gtagagctgg gacaggctca ggtagaggct gttgttgtcg ttcaagtcgt
     8161 aaaccgcgcc tgcgtagccg gtgaacttgg ttttgctggc tttgtgcagg gttttgcctt
     8221 cgcccgactc gattttatag tgtcccaaac gtccgccgcc gataagcgac agcccgtcgg
     8281 caggatggaa ggtggatttg ccgtaaatgc cgaattcgtc gaggttttcg gtagcgacgg
     8341 tatggctgta accgcgcacg cctttgcgcg cgttggcaat caaatcaacc tgcggtatgc
     8401 tgcggaactc gtttaaagcc aggccgccgc gtgcatataa agtagtacgg ccttgttcgt
     8461 tggtgctgcg gaagcggttg taatcggcgc cgatgacaaa ttcgttggcc gtattgccca
     8521 agcggaaagg cctgctgtag ctggcgtcaa acgcgagggc tttttgtttg atttctgtac
     8581 ccaaacccac cgcgcaggct ttgtcgtcag ccgtattgca gcccgggcgg cctgccgggg
     8641 ttttcatgcc cagcttgctg ccggcaaagg catagttgga gtcggcatcg cggtcggaat
     8701 agcgcatacc gactttgccg tagccgccgt tgccgaagta atgtttcaaa tcggcgaaca
     8761 cgtcgtggct gtgcatttta aatttgttcc aatccgcgcc gacaaatacg tgttgcggca
     8821 gggacggtaa tttgttattg gcatcggctg gcaagccgtt gtacggcgcg aggtggcgtt
     8881 gctggtaaag atagcccgcg cccaaaaccg tatcggggtt gatgtcccaa tccgccgccg
     8941 cgtagaaggt ttcgtgccgg ttgtttttct cggcgggacg cggagacgcg ccgacggtct
     9001 gcgccatcac gcggccgcgc acgctgccgt ctgaattgag gctgcccgat acgtccgcct
     9061 cggctttata ttgtttgtgc gtaccgaacc ctgccgcagc atgaccttgg aacgctttgg
     9121 ccgggcgttt gcacaccaga tttacgatgc cgcccatctc gccgctgctg tcgaacaagc
     9181 cgctcggccc gcgcatcact tccacacggt cgaaggcaaa cagattgggc agcgtgccgt
     9241 tgatactctg catctgcgcg ggcaggccgt cgatgttgta ttcgctgtat tcgtaaccgc
     9301 gcgcgtaaac cgaagagcgt ccgtcgtcgt tgctcaacac gcgcaggccg ggcgttttgc
     9361 gtgccaactg gtcaaacgta tcaacattgc ggtctttgac ctgttgattg gtgatgatgc
     9421 tgacagattg cggaatttcg cgcaaagaag cggggatttt tgtgccgacg gtggcggcaa
     9481 acgagctgta atcgccgttt ttctcggtgg caatcgcgtt gtacgaacgc tgacccttaa
     9541 tatggacggt ttccaaatcc gccgtttgtg cggcaaaaac cgaagacgaa agtgctgcca
     9601 aaaccgtggc ggcggtcata ttgatgcgga aaactgacat aaactgtccc attcacataa
     9661 atgataatgg ttctatttta ataaagcaca acgcggcttg ttcggaaaaa catatcgcgc
     9721 agccgacaaa ttttgtcgaa aatgcgacac gtctgcgttt tccgcataaa atctgacttt
     9781 tcaccgtaaa caacctgcca tgaccacgcc caaactcatc atcttcgact gggacggcac
     9841 gcttgccgat acgacccaac ccatcatcga caccatgcgc cgcagcttcg ccgaatgcgg
     9901 ttttccgccg cccgaagcgg aacgcgtccg cagcctgatt ggctacagcc tgcccgaaat
     9961 catccgcgac ctgctcgaaa tgccgtctga aaccgccatt gccgacatca cacgcactta
    10021 ttccgcacat tacctcaatc ccaacaaccg caatatgacg ctctttcccg atgccctgcc
    10081 ctgtctggac aagctcaaag cacaaggata ctggcttgcc gtcgccacgg gcaaagggcg
    10141 ggcgggtttg gacaacgcca tcagccaaac cgccaccggc ggctattggc tcgccaccgc
    10201 ctgcgcgggg gaatatccct ccaaaccctc gcccgaaatg gtattcggaa tctgcggcga
    10261 actggggttc gacccgaaag aggcattggt cgtcggcgat acggcgcatg acctgcatat
    10321 ggcggcaaac gcaggcgcgg cggcagtcgg cgttgccacc ggcgcacatt cgcgcgaaca
    10381 gctccttagc gcaccgcatc tcgccgtatt ggacggtttg tccgaactgc ccggttttct
    10441 tgcacagcat tacgcctgat tggtttccgc atccggcact cgaaacaaat gccgtctgaa
    10501 ggttgttcag acggcatttg ttttgcccaa acattcaacg cttgctcaac gtttgcacaa
    10561 atcgggtttg gtttcgccct cgcggcgcaa ctctttgggc aggacgaaca cgatgctttc
    10621 ttccgcgccc tccccttcgc gtacggtttc atgcccccac ccgcgtatgg ttgccaatac
    10681 ttcctgcacc aacacttcgg gcgcggacgc gcctgccgtt acgccgactt tgttcttgcc
    10741 ctcaaaccac gcgcgttgca ggtagcctgc attgtccacc atatacgcat cggttccgat
    10801 gcctgccgcc acttcgcgca ggcggttgct gttggacgaa ttgggcgaac cgaccacaat
    10861 cacgatgtcg cactgttctg ccaactcttt gacggcggtt tgccggttgg tcgtcgcata
    10921 gcagatatct tccttgtgcg gattgcggat attggggaaa cgcgcgttca gcgcggcgat
    10981 gatgtctttg gtttcatcga ccgagagcgt ggtttggctg acataggcga gtttgtcggg
    11041 gtttctgact tcgagttttg ccacatctcc gaccgtttcg accaaaagca ttttgcccgg
    11101 cgcaagctgc cccatcgttc cttcaacctc gacgtgcccc ttatgcccga tcatgatgat
    11161 ttcacagtct tgggcatcca gtcgggcgac ttccttatgc actttcgtca ccagcgggca
    11221 agtcgcatca aacacgcgga aaccgcgctc cgccgcttct tgccgcaccg ccttcgatac
    11281 gccgtgtgcc gaataaacca gtgtcgcgcc cggcggcact tccgccaagt cttcaataaa
    11341 caccgcacct ttttcacgca ggttgtccac gacgaatttg ttgtgaacga cttcgtggcg
    11401 cacataaatc ggcgcgccga attcttccaa agcacgttcg acaatactga ttgcccgatc
    11461 cacgccggcg cagaagccgc gcggattggc aaggatgatg gttttctcgt tcataagttt
    11521 tgcattccgt gttcagacgg cattcacgtt tttttgccat ctttgcgatg gacgatattg
    11581 tcaagcactg ccaataccgc gccgacgcag ataaaactgt cggcaatatt aaaggcggga
    11641 taaaaccaat tttgccaata aaacaataag aaatcgacga catgaccgtg tatcaggcga
    11701 tcgatgacat tgcctaacgc accgccgata atcatcgccg cacccgtttt gccgagggct
    11761 gcaaactcat cgcgcaagat ggcgcgtacc aaatacgcgc tcaccgccac cgccagcacc
    11821 aaaaaaaagt atttttgcca gccgccctga tcggcaagga agctgaacgc cgcacccggg
    11881 ttgtacacca gcgtcagatc gaaaaaggaa ggaatgacat tgacgcgttc ccgatactga
    11941 aacgacgaca gcaccgccca cttcgaccac tggtccagca cgatggcggc aagtgccaat
    12001 acccaatagc gcgttttact tgaaacagat gaagacatat ttttcaacag ccggtaaaag
    12061 agtaccattt tacccgaaaa ccccctttcc tgtacccgaa acggcaaatg ccgtaatctt
    12121 aaaacccgtc attcccgaca acaccgtaat ctcgaaaccc gtcattcccg cgtaggcggg
    12181 aatccagacc tgtccgcaca gaaacttatc ggataaaaac agttgctcaa acccctcgtt
    12241 ctagattccc actttcgtgg gaatgacggt tcagttgcgt tccaacaaca ccgcaatctc
    12301 gaaatccgtc attcccgcgc aggcgggaat ccagacctcc gacgcggcgg gaatctatcg
    12361 gaaatgactg aaaccccgag attctagatt cccactttcg tgggaatgac ggttcagttg
    12421 cgttccgaca acaccgtaat ctcgaaatcc gtcattcccg cacaggcggg aatccagacc
    12481 cctgacgcgg cgggaatcta tcggaaatga ctgaaacccc gagattctag attcccactt
    12541 tcgtgggaat gacggttcag ttgcgttcca acaacaccgc aatctcgaaa tccgtcattc
    12601 ccacacaggc gggaatccag acccacgacg cggcgggaat ctatcggaaa tgactgaaac
    12661 ctcgagattc tagattccca ctttcgtggg aatgacggtt cagttgcatt ccgacaacac
    12721 cgcaatcttg aaacccctcc gccgttataa agacaaatcg cggcacaaaa aatgccgtct
    12781 gaaatgctgt tcggcggttt cagacggcat ttgctcaaac tttatcaggc gtaatggcgc
    12841 gtttcgcctt ctccgccgac attctctgca cagcgtttgc agacggtttc atagcctgca
    12901 accgcgccca catcgcgggt gtagtgccag cagcgttcgc atttttcacc atcactggct
    12961 ttagcggcaa cggcaagttc gctgcctact ttcacttctg ctttagacac cagcaaagca
    13021 aagcgcaatt cttcgcccaa agcattcaga tagccggcca tttcttccgg cgcggtaatt
    13081 tcggcttcgg cttgcaagga cgaaccgacg gttttgtcgg cgcgcaaagg ctcgatggcg
    13141 gcggttaccg cttcgcgggc ttcgcggatt gccgtccatt ttttcaccag ttcggcttcg
    13201 gttttttcgt tgatggtcgg gaactcgtgc caagtatgga agaggacgct gtcttcttcg
    13261 ccgccgccga tgatgtccca cgcttcttcg ccggtgaagc acaaaatcgg tgcaatcaag
    13321 agaaccaaac tgcgtgtgat gtgatacagg gcagtttgtg cgctgcggcg tgcatggctg
    13381 tcggctttgg tggtgtagag gcggtctttc aggatgtcga ggtagaacgc acccaagtct
    13441 tccgagcaga aagaaacaat gtcttttacg gcaaagtgga aggcataacg cggatagtaa
    13501 tcgcctgcca gacgctcttg cagctgacgt gccaatacca cggcgtagcg gtcgatttcc
    13561 accatatccg cctgttgcac ggcatcttca atcggattaa agtcgctcaa gttggcaaac
    13621 aaaaagctca aggtattgcg gatacggcgg tagctttcgg ttacgcgttt gaggatttct
    13681 ttggaaatcg ccaattcgcc gctgtaatcg gtagatgccg cccacaggcg caggatgtct
    13741 gcgccgaatt cgttataaac ctcttgcggt gcaacgacgt tgccgatgga tttcgacatt
    13801 tttttgcctt cgccgtcgac aacgaaacca tgggtcagca gctgtttata cggcgcgcga
    13861 cccattgatg aggcgcagcc ggtcagcatg gacgattgaa accagccgcg gtgctggtcg
    13921 ctgccttcga gatacaaatc cgccggccat tccaattctt cgcgttgttt cacaacggaa
    13981 taatgggtcg aaccggaatc gaaccatacg tccattgtgt cagaaagttt atcgtaattt
    14041 tcgcaatctt ccgcgctcaa gagttcgctc ttatcgaggg agaaccacgc ttcgatgcct
    14101 ttttcttcga ttttcagggc aactttttcc aaaagttcgg cagagttcgg atgcagctcg
    14161 cccgtttctt tgtgaacaaa gaaagtcatc ggcgtgcccc aatagcgttg gcgtgaaacc
    14221 acccagtcag gacgaccttc aatcatggct tccaaacgcg cgcgacccca agacgggaag
    14281 aattcggtgt cgtccacggc cttgatggct ttgtcgcgca gggttttgcc gtcggcaccg
    14341 gctttgtcca taccgacaaa ccattgacct gtcgcgcggt aaatcagcgg cgttttgtgc
    14401 cgccagcagt gggcgtagct gtgttcgatt ttactgcttg ccaaaaggtt gctggtttct
    14461 tccaaccatt gcaggatgac ggggttcgcc tcccaaacgc gcataccggc gacacgcggc
    14521 gtttcgccga tgtatttgcc ttcggcgttg acaggattgt aaagctcgat gccgtatttg
    14581 ttgcagacgg cgtagtcttc caaaccgtgc gcgggcgcag tatgcaccaa gccggtaccg
    14641 gcatcggtgg taacgtgttc gccgttaagc atgggaatat cgcgttcgag gaacggatgg
    14701 ttcatgtgca ggttttccag cttgtcgccg gtggtttcgg caaggatggc gatgccgtct
    14761 gaaaagccgt aacgtttgag cgcatcttcc gccaaatctt tcgccagcac caatttgcct
    14821 gtaggcgtat cgattaattg atacaccacg tccgcaccgg cagacacggc ttggctcgcc
    14881 ggcagcgtcc aaggcgtggt tgtccaaata acggcaaacg ctttgccttc gatacctgcc
    14941 aaaccgaatg cggcggcaag cgcggcggtg tctttaaacg gataggcaac gtcaatcgca
    15001 ggcgatactt tgtctttgta ttccacttcc gcttcggcca atgaagaacc gcagtccaag
    15061 cagaattgaa ccggtttcgc gccccggtag agatagcccg atttgtagat ttcgccgagc
    15121 atacgcacgg tatcggcttc tgttttgaaa tccatggtca ggtaaggatg gtcccagtca
    15181 cccaacacgc ccaagcggat aaagtctttt ttctgacggg caatctgttc ggcggcgtat
    15241 tcgcggcaca attcgcggaa acgggcttta ggcatgtctt tgccgtgcag tttttccacc
    15301 atcacttcga taggcaggcc gtgacagtcc caacccggca cataaggcgc gtcaaaaccg
    15361 gcttgggttt tgctgcggat aatgatgtct ttgagaattt tgttgacggc gtgaccgatg
    15421 tggatgtcgc cgttggcata cggcgggccg tcgtgcagga tgaatttcgg acggcctttg
    15481 gcgatttcgc gcagtttttg gtagcgtttt tgctcgtacc agcttttcag ccatgcaggc
    15541 tcgcgcttgg caagattgcc gcgcatcgga aacgggcttt cgagcaggtt gacggttttg
    15601 ctgtaatcgg tcattttttg atctctattg ttacaatatt tcggtttcag acggcattgc
    15661 gcctcaaaca gtatttcaca acgggaaacc cctatgccgt ctgaaaagtt aaaaggttga
    15721 ttgtagccca atcggatggt ttgtataagg tttgcctacc aacactttgc ggcttccata
    15781 tcggctgcta tctgcctttt cagttcttcc ataccgtcaa acttttcctc atcgcgcagt
    15841 ttgtgcagga agcggacgtt cagccgttgt ccgtacaggt cgccttgaaa gtcgaacagg
    15901 tggacttcaa gcttttgaga acagccgcta tcaacggtgg gattgaagcc gaagctcgcc
    15961 acgccgcgcc gcgtgccgaa tgcgccgtcc gcttcgacga cgaacacgcc gccgagtgca
    16021 taacggtggc cgggcaggcg gatgttggca gtcggggcgt ttaaggtgcg tccgagtttt
    16081 ctgccgtgca ccaccctgcc ccccaaaacg tagtcgtgcc ccaaaagttt tttcgcatag
    16141 gcaaggttgc cgtctgaaag ggcctggcgg acggcggtac tgctggtgcg gatgtcttcg
    16201 acgatgacgg aaggcgtgcg ttcggtctgc atatcgggct gttgtgccaa cagttcaaaa
    16261 cagccttccc gccccgcacc gaaacggaaa tcgtcgccga cgagcaaata gcgcgtattt
    16321 aaagtttgac gcagcaggcg gtcgataaac ccttgcgcgg atatttcgga aaaatgccgg
    16381 tcgaaacgca aaacccagac ggcatcgatg cagcccgtcc cttccagcaa ttccagtttg
    16441 gtacgcaggg ggctgatgcg gcacggcggc actctacccg tgcggcttgc aaaaaattct
    16501 ttgggttgcg gctcgaagat aacggctacg acgggcaggc cgcgcgcatc ggcttcgagg
    16561 cggagttttt ggaggatgtg tttgtgtccg aggtgtacgc cgtcaaaatt gcctatggtt
    16621 acggcggccc cgtgcggaaa gtcgggcgcg ttgtgccgcc ccagcctgat tctcattgtt
    16681 atgttcgggt atgtggtgaa acaggcggtc attgtaaacg gtattgcggt ttatagacag
    16741 tgtgccgccc gttacgcccg cccgacgcgg gaaaagtagg caaatttccc gcagccgaac
    16801 gcgccaaacg cataaagcgc gcagcaggcg cggtgctatg tgttgaaaca tcgccccaaa
    16861 cctgatgcaa catcagtgaa aatcgttctt ttttaaccag gtaaaccgag acaaacaacc
    16921 ctccgccgtc attcccgcgc aggcgggaat gacggcattt ctgcggcaat cggattattt
    16981 ccaaaccaaa agcgcgtgat tgcgtttgcc gcgccgaagg atggtgtatt tgccgaaacg
    17041 tttgtgttcg tcggtcagca ggcaggcatc gtcggggcgt tcggcggcgt ggttggggtt
    17101 gttggcttcg gcaggtttgc cgttgagcaa aaccgctttg ctgttcacaa agccgcgcgc
    17161 ttctttattg gaggatgcca aaccggtttt gaccaaggct tcgacgacat tgatgccgtc
    17221 tgaaacttca aatgcaggca ggccgtcgag ggcgagctgc tcgaagtcgc tttcggtcag
    17281 gctgctttgg tcttcggcaa acaggctttc ggaaatgcgc tgcgcggcgg caagggcttc
    17341 ttcgccgtga atcaggcggg tcatttcttc ggcgaggatg cgttgcgctt cgggcttgct
    17401 gccgcttgcc ttgtctttcg cttcgacggc atcgatttct tcgatggaca ggaaggtaaa
    17461 gtatttcagg aatttataca catcggcatc ggcgactttc agccagaatt ggtagaactg
    17521 atagggcgag gtttttttcg cgttcagcca tactgcgccg ccttcggttt tgccgaattt
    17581 ggtgccgtct gatttggtaa ccaaaggcag ggtcaggccg aacacttgtt tttgattcag
    17641 gcggcgggtc aggtcgatac cggcggtgat gttgccccat tggtcggagc cgccgatttc
    17701 caaaaccgcg ccgtggcgtt tgttcaactc ggcgaagtcg tagccttgca gcagggagta
    17761 ggcgaactcg gtgaaggaaa tgcctgcgcc gtcgcggtca atgcgctgtt tgacggattc
    17821 tttgttcagc atggcgttga cggagaaatg cttgccgatg tcgcgcagga agtcaaggca
    17881 gttcatgctg ccgaaccagt cggcattgtt cgccataatg gcggcatttc cgccttcaaa
    17941 gctcaagaaa ggggttaatt ggttgcggat actttccacc cagccggcaa cagtttcggc
    18001 ggaattcaag ctgcgttcgg cggctttgaa gctggggtcg ccgatcatac cggtcgcgcc
    18061 gcccaccaaa gcaatcggcg tatgccccgc ctgttggaag cggcgcaatg ccaatacggg
    18121 cagcaggtgt ccgatgtgca ggctgtcggc ggtcggatcg aaaccgcagt aaagggcgat
    18181 tttttgttcg ttcaacaaag cgtctaaggc ttcgatgtcg gtcgtttgcg cgataaggtc
    18241 gcgcgattgc aggtcttgga tgacgctcat cggtctcttt caaaaaaatt agcgtttttg
    18301 caaaccgccg attgtaacaa atttaagcga atcaatggtt atggcgcgta ttgagaaacc
    18361 gttgtttttc ggaaaaacgc tttgccaatt ccgtgccgcc gtaagggttg atgtggtctg
    18421 tgtccgagta aaccggcaat ccgccgattt gaaaatctgc ggggatatag gcggcggcat
    18481 caataatata gacgttgggg tatttggctg ccaattccct gatgcgtgca ttggctttca
    18541 gggtgctttc gtcgtccggg cgcagggttt ggcggtaacc cggtatgcgt gaagacaaga
    18601 tataggcgcg ctggacgttg taagacgagg caaggttgtc cgccatcagg taaacggctt
    18661 gtttttcgga tgagagtttg tgcagcatac ggtcgaattt ttggaaaaaa ccggcatcgt
    18721 aggcaaggga gcggctgttt tcgggcatct ggctgcccca gcgcatcgcc aaaaccactt
    18781 ttgaataccg gggcaggtgt tcttcggcat agcggtaaac ggcgcggcag gcggcccagt
    18841 tttggaacac gcgggacgcg tagcctgaga cctttgcaaa attcctttcc ctcccgacag
    18901 ccgaaaccca aacacaggat ttcggctgtt ttcgtaccaa atacctccta attttacccc
    18961 aataccccct taatcctccc cggatacccg ataatcaggc atccgggctg ccttttaggc
    19021 ggcagcgggc gcacttagcc tgttggcggc tttcaacagg ttcaaacaca tcgccttcag
    19081 gtggctttgc gcactcactt taatcagccc gaaataggct gcccgcgcat agcggaattt
    19141 gcggtgcagc gtaccgaagc tttgttcgac cacataacgg atcttcgaca aatatcggtt
    19201 atgtttggtt tgcgtttccg tcagcggacg gttgcggcag gctttgcgca taatgccgtc
    19261 taacaactga cgctcttcca gatgttgccg gttttccgca ctgtcatagc ctttgtcggc
    19321 atagacggtc gtacctttgg
//
LOCUS       DBBZXW010000028        18972 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.028, whole genome shotgun sequence.
ACCESSION   DBBZXW010000028 DBBZXW010000000
VERSION     DBBZXW010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18972
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.028"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..79)
                     /locus_tag="ACJJD2_000910"
     CDS             complement(<1..79)
                     /locus_tag="ACJJD2_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HGG7579470.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="ACJJD2_000911"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="ACJJD2_000911"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HGG7579471.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKTVSI"
     gene            complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="ACJJD2_000912"
     CDS             complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="ACJJD2_000912"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HGG7579472.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="ACJJD2_000913"
     CDS             complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="ACJJD2_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HGG7579473.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSGHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLVGKSVEALKNYLSLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4804..5868
                     /gene="fba"
                     /locus_tag="ACJJD2_000914"
     CDS             4804..5868
                     /gene="fba"
                     /locus_tag="ACJJD2_000914"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HGG7579474.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            5888..6850
                     /locus_tag="ACJJD2_000915"
     CDS             5888..6850
                     /locus_tag="ACJJD2_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HGG7579475.1"
                     /translation="MPSEPLFGRHLIFASLTCLIDAVCKKRYHNQNVYISSILRMTRS
                     KPVNRTAFCCFSLTAALILTACSSGGGGVAADIGAGLADALTAPLDHKDKSLQSLTLD
                     QSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGQLITLESGE
                     FQVYKQSHSALTALQTEQEQDPEHSGKMVAKRRFKIGDIAGEHTSFDKLPKDVMATYR
                     GTAFGSDDAGGKLTYTIDFAAKQGHGKIEHLKSPELNVELATAYIKPDEKHHAVISGS
                     VLYNQDEKGSYSLGIFGGQAQEVAGSAEVETANGIHHIGLAAKQ"
     gene            6989..7666
                     /gene="tsaB"
                     /locus_tag="ACJJD2_000916"
     CDS             6989..7666
                     /gene="tsaB"
                     /locus_tag="ACJJD2_000916"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HGG7579476.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETCLFHQEVGSRQSALI
                     LPEIRTLFHDAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGVPSLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHSELLYVRNKIALTAKEQ
                     AERKART"
     gene            7663..8103
                     /gene="rimI"
                     /locus_tag="ACJJD2_000917"
     CDS             7663..8103
                     /gene="rimI"
                     /locus_tag="ACJJD2_000917"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HGG7579477.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGGIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWFAHLPEDTQRLLLE
                     VRAGNTAAQALYAAHGFTDAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            8097..8834
                     /locus_tag="ACJJD2_000918"
     CDS             8097..8834
                     /locus_tag="ACJJD2_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG7579478.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8896..9537
                     /gene="pyrE"
                     /locus_tag="ACJJD2_000919"
     CDS             8896..9537
                     /gene="pyrE"
                     /locus_tag="ACJJD2_000919"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HGG7579479.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9613..10047
                     /locus_tag="ACJJD2_000920"
     CDS             9613..10047
                     /locus_tag="ACJJD2_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HGG7579480.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10044..11354
                     /gene="argA"
                     /locus_tag="ACJJD2_000921"
     CDS             10044..11354
                     /gene="argA"
                     /locus_tag="ACJJD2_000921"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HGG7579481.1"
                     /translation="MIVPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFYLDMLQTAASAAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARSMGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKAYRSNGRNSHILVRRLHR"
     gene            11553..13568
                     /locus_tag="ACJJD2_000922"
     CDS             11553..13568
                     /locus_tag="ACJJD2_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HGG7579482.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILAQLQDTRQIPFCQEHRARMYHFHQDTEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIDKDAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSSESEAKPLNLPNDCDVAGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDMPTLVYAYG
                     GFGIPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGMSSPRHIGLQGGSNGGLITAAAFVCEPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRWLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLHETSAQSWLYSPDGGGHTGNGTQRESADELACVLLFLKEFLG"
     gene            complement(13682..14638)
                     /locus_tag="ACJJD2_000923"
     CDS             complement(13682..14638)
                     /locus_tag="ACJJD2_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7579483.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            14874..15839
                     /locus_tag="ACJJD2_000924"
     CDS             14874..15839
                     /locus_tag="ACJJD2_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7579484.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKAAFEKAEPVAAGKE"
     gene            complement(16146..16298)
                     /locus_tag="ACJJD2_000925"
     CDS             complement(16146..16298)
                     /locus_tag="ACJJD2_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579485.1"
                     /translation="MRFVVLASFSGRSCNESVIDFDVSLRLTALSLTLSHRERGRVAV
                     ASLFAA"
     gene            16329..16652
                     /locus_tag="ACJJD2_000926"
     CDS             16329..16652
                     /locus_tag="ACJJD2_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG7579486.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSVVLIELSD
                     PSEAV"
     gene            16766..18943
                     /gene="tdfF"
                     /locus_tag="ACJJD2_000927"
     CDS             16766..18943
                     /gene="tdfF"
                     /locus_tag="ACJJD2_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent iron piracy receptor TdfF"
                     /protein_id="HGG7579487.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKALDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNAEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPSSFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT         4257 a         5884 c         5136 g         3695 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccaaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatac agccgtcctg
      121 accgattaaa ttcatatttt aaaacaatat tctgtttaca aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgttga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgcccaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctcattc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtt aaagaaatca acctcttagg ccaaaacgtc aatgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgc atcgtccacg
      961 aaatccccgg catcgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt atgcctgagc agcgacttta
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acattgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgca cgacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaacgat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccaact gcaagcccgc accgccaaca
     1501 accgcgtcgt caactttacc ggcacgcccg atatgatcaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaaaccgt cagcatttga tttcccccgc
     1621 cgcaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgacgg
     1681 cgcggccggg cggcttaatt tgccgcatcc cgatccgaca gccacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa gcccaaatcg tctaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacgaagcgc
     1981 atatcggcga cggtggcgtt cagtttttcg gcaaccgcca atgcgggggc gaccatgctg
     2041 ccaaaggcaa tgaaggcagt tttcccacct tcgcggcgga taatgccctt gccgatttca
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg cgtctgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat attcggaatg cagcgcaaga agctcaaatc gtacaaaccg
     2281 gcgtgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggc
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catcccttcg caagccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg cgatgccgac atcgaaatag cggtcgggga atcgttgttc aaactcaacc
     2521 aagccgctgc cctcgcgcat ggcgggggta atcgcaacca gtcgggaatc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcggc gggcttgggt
     2641 tctttttcag acggcatttg cgccgcgctt tctttaggca ggttggcgac ggcgtggtat
     2701 ttgacgggat cgttttcggc gagtttgtag ccgttgcctt ttttggtaat gacgtgcagc
     2761 aactgagggc ctttgcggct gcgcaagtct ttcaatacgt ccaccagatt ttcgacgttg
     2821 tgtccgtcca cggggccggt gtagcggaag ccgaagtttt caaacaaaga cagcgactgt
     2881 ttggcgtgtt cggcttcttc ggcaagggtt ttgattttgt gttcgacttt ttgggcaaac
     2941 tccatcgcgc cgggtatttt gtctaatacc ttgcccgttt gcgctttgac ggtactcaac
     3001 aggccgtgca tatcgcgcac gacgttgctg gcaaggtatt tcggcagcgc gccgacgttg
     3061 ggggaaatcg acatttcgtt gtcgttgagg acgaccagca aatccacatc catatcgcct
     3121 gcgcaattca aggcttcaaa cgcctgcccc gccgtcatcg cgccgtcgcc gatgatggcg
     3181 acgctgcggc ggtcgctgcc caagagtttg tctgccgccg ccatacccaa agccgcgccg
     3241 atggaagtgg acgaatgccc cacgccgaac gcgtcgtatt ccgactcaca acgtttcgga
     3301 aaacccgcca agccgccgta ttggcgcatc gtgtgcattt ggtttttcct gcctgtcagg
     3361 attttgtgcg gatagctttg gtgtccgaca tcccacacca gcttgtcttc gggcgtgtcg
     3421 tacacatagt gcagggcgat ggtcagttcg accgcgccca gattgctggc gaaatgaccg
     3481 ccggtctgcc cgacagattc cagcagaaag gcgcgcagct cgccggcaag gcgcggcagc
     3541 tgttttttgt ccagacggcg caaatcttgc gggctgtcaa tcaggtcgag tagggggctt
     3601 gggttcatgg tgtgtctttt ttatgtgtcg tccgggtgca acggtcaatt atatatcaag
     3661 agcgtgcggc tgacggctga ttttgccgta tgtcattcgt cctgccgctt ggcgcgcggg
     3721 tgggcttcgt catacaggcg ggcgatgtgg tcgaaatcga gtttggtgta aatctgcgtg
     3781 gtcgaaaggc tgctgtgtcc gagcagctcc tgcaccgccc ggatgtcgcg cgaagcctgc
     3841 aacaggtgtc cggcgtagct gtggcgcatc atatgcggcg aaacgtgcct gccgtcgccg
     3901 ttttgcgccg cccattgcgc caaacgtttt tggatttggc gttggctcag gcgcgtgccg
     3961 ttcctgccgg taaacagggc tttgccgtcc gatgccgtct gacgcagcga cagatagttt
     4021 ttcagggctt ccacgctttt gccgaccagc ggcacctgcc gctgcttgcg ccctttgccg
     4081 gtaacgtgta cccacgcctc gtccaaatag acatcatctg cattcaagcc gtgtatctcg
     4141 ctcacgcgca aaccgctgcc gtacatcagc tcgaacaggg cgtgatcgcg caccgccagc
     4201 gggtcgccgc cgtccacggg caaatccagc atccggttca gccattcctg cggcagggct
     4261 ttgggtacgc gctcgggctg cttcggcggt ttgatgtcgg cggtcgggtc ggtatgcagc
     4321 agaccgcgtt tgaccagcca ggcgcaatac tgccgccaag acgacagctt gcgcgccagc
     4381 gtccgcgcat tcaaaccgcg ctgcgacagc cgccgcaacg ccgccgtaaa atcgcgttgc
     4441 gacaagccct gcggcacgcc gcctgcatct tcagacggca tttgtgccaa cagcgcaaac
     4501 agttcttcca aatcgcgccg gtatgccgcc accgtgtgcc ccgacttgcc ctcgcgcacg
     4561 atgttttcca aataagcgtc aaaatgcgcc gcaaacccgt ccaaaaccat aaccgcccca
     4621 cacaaatatc aaaaaaacag tgaaaacatt atcataaacg acacaccaaa accccgaacc
     4681 gcccaaaatc cgacccgtcc gcccgccgtt atcgttaaca taaaatcaat gagccgttta
     4741 tggttttttg ccgcaaaaaa cattataatc cgccttattt acctattgcc caaggagaca
     4801 caaatggcac tcgtatccat gcgccaactg cttgatcatg ctgccgaaaa cagctacggc
     4861 ctgcccgcgt tcaacgtcaa caacctcgaa caaatgcgcg ccattatgga agccgccgac
     4921 caagtcaacg cgcccgtcat cgtacaggcg agtgcaggtg cgcgcaaata tgcgggcgcg
     4981 ccgtttttgc gccacctgat tctggcggct gtcgaagaat ttccgcacat ccccgtcgtg
     5041 atgcaccaag accacggcgc atcgcccgac gtgtgccaac gctccatcca actgggcttt
     5101 tcctccgtga tgatggacgg ctcgctgatg gaagacggca aaaccccttc ttcttatgaa
     5161 tacaacgtca acgccacccg taccgtggtt aatttctccc acgcttgcgg cgtatccgtc
     5221 gaaggcgaaa tcggcgtgtt gggcaacctc gaaactggcg aagccggcga agaagacggt
     5281 gtaggcgcag tgggcaaact ttcccacgac caaatgctca ccagcgtcga agatgccgtg
     5341 cgtttcgtta aagataccgg cgttgacgca ttggcgattg ccgtcggcac cagccacggc
     5401 gcgtacaaat tcacccgtcc gcccacaggc gacgtgttgc gtatcgaccg catcaaagaa
     5461 atccaccaag ccctgcccaa tacacacatc gtgatgcacg gttccagctc cgttccgcaa
     5521 gaatggctga aagtcatcaa cgaatacggc ggcaatatcg gcgaaaccta cggcgtgccg
     5581 gttgaagaaa tcgtcgaagg catcaaacac ggcgtgcgca aagtcaacat cgataccgac
     5641 ttgcgccttg cttccaccgg cgcggtacgc cgctaccttg ccgaaaaccc gtccgacttc
     5701 gatccgcgca aatatttgag caaaaccatt gaagcgatga agcaaatctg cctcgaccgt
     5761 tatcttgcgt tcggctgcga aggtcaggca ggcaaaatca aaccggtttc cttggaaaaa
     5821 atggcaaacc gttatgccaa gggcgaattg aaccaaatcg tcaaataaca ggttgcttgt
     5881 aaacaaaatg ccgtctgaac cgttgttcgg acggcatttg atttttgctt ctttgacctg
     5941 cctcattgat gcagtatgca aaaaaagata ccataaccaa aatgtttata tatcatctat
     6001 tctgcgtatg actaggagca aacctgtgaa ccgaactgcc ttctgctgct tttctctgac
     6061 cgccgccctg attctgaccg cctgcagcag cggaggcggc ggtgtcgccg ccgacatcgg
     6121 cgcggggctt gccgatgcac taaccgcacc gctcgaccat aaagacaaaa gtttgcagtc
     6181 tttgacgctg gatcagtccg tcaggaaaaa cgagaaactg aagctggcgg cacaaggtgc
     6241 ggaaaaaact tatggaaacg gcgacagcct taatacgggc aaattgaaga acgacaaggt
     6301 cagccgtttc gactttatcc gtcaaatcga agtggacggg cagctcatta ccttggagag
     6361 cggagagttc caagtgtaca aacaaagcca ttccgcctta accgcccttc agaccgagca
     6421 agaacaagat ccagagcatt ccgggaagat ggttgcgaaa cgccggttca aaatcggcga
     6481 catagcgggc gaacatacat cttttgacaa gcttcccaaa gacgtcatgg cgacatatcg
     6541 cgggacggcg ttcggttcag acgatgccgg cggaaaactg acctatacta tagattttgc
     6601 tgccaaacag ggacacggca aaatcgaaca tttgaaatcg cccgaactca atgtcgagct
     6661 tgccaccgcc tatatcaagc cggatgaaaa acaccatgcc gtcatcagcg gttccgtcct
     6721 ttacaatcaa gacgagaaag gcagttactc cctcggtatc tttggcgggc aagcccagga
     6781 agttgccggc agcgcggaag tggaaaccgc aaacggcata caccatatcg gtcttgccgc
     6841 caagcaataa ccattgtgaa aatgccgtcc gaacacgata atttaccgtt cggacggcat
     6901 ttttgcgcca taccgcccta ggacacgacg gcacggcagg caagccggtt tcactatata
     6961 atgccgtctg aaccaacgag agaatgccat gcaagctgat tttaaccgcc ccgtcctcgc
     7021 cgtcgatacc ggaacttcct atttgtcgct cgcgctgcgc gccgacggcg aaacctgcct
     7081 gttccatcag gaagtcggca gccgccagtc cgcactgatt ctgccggaaa tccgcacgtt
     7141 gtttcacgat gcaggcatta ccgccgccga tttgggggcg attgtttatg cgaaaggccc
     7201 cggcgcgttt acgggactgc gtatcggcat cggcgtggcg caaggtttgg caacgccgtt
     7261 tgatactcct ttaatcggcg taccctcgct cgatgccgcc gcctcgctgc cgccgccgca
     7321 aagctgcata ctcgccgctg cggacgcgcg tatgggcgaa gtgttttatg cgtggttcga
     7381 cacgctgaac cgccgccgtt tgagcgatta tcaggtcggg cgggcggcag acatccggct
     7441 gccggaggga tgtgcctttt cagacggcat aggcagcgcg ttcgcgttgg aagaaacgcc
     7501 gccgttttca ggcaaacccg atatgccgac cgccgccgac ttcctcaatc tggcggcgga
     7561 aggcggtttt cccgccgtcg ctgctgcaca ctccgaactg ctctacgtcc gcaacaaaat
     7621 cgccctaacc gccaaagaac aggcggaacg gaaagcccga acatgaacat ccgccgcgcc
     7681 tcaccgtccg actgcgccgc actcgccgcg ctcgatgccg tctgcaaccc gtccgcgtgg
     7741 acgcaacgcc aatttgagtc cgcattggtt tcgccgtccg aacaggtttt cctcgcggaa
     7801 aaagacggcg ggattgccgc ctttatcgtt tggcagaacc tgcccgacga atccgaactg
     7861 cacctgattg ccaccgcgcc cgaatgccgc cgccgtggcg ttgcgtccgc cctgctcgaa
     7921 tattggttcg cacatctgcc cgaagacacg caacgcctgc tgctcgaagt ccgtgcaggc
     7981 aacaccgccg cacaggcact gtacgcggcg cacggcttta ccgatgcggg caggcggaaa
     8041 aactattacc gtacagccga cggtaaaacc gaagatgctg tcttaatgga gaaaatatgt
     8101 taagcgcgcg ctacctccac ctgcacgaag ctttgggttt aggcccgatg tggctgaaac
     8161 aggccgccgc cgtcctgccg cccaaaaaca cacccgcaac cccggcacag gcacgtcctc
     8221 aaaccgtccg cgccgccccg atccgccctt cccaacccca taacggtcag gcgcggctcg
     8281 aaacgatgaa agcgttggaa accgccgccg tacatacgcg caaacccgcg cctgaaaccg
     8341 aaacgccccc gcccggcctt tcagacggca tcgcccccgt tcccgccgct tcgggcataa
     8401 ccaaacttgc cgtcgtcagc ctttgcccac cgattgagga tgcggtttac gggcaactgt
     8461 tctacggcaa agcaggtgtt ctgcttgaca acatactcaa agccgtagga ctggatgccg
     8521 cctatgtcca caaaacctgt tgggtgaaaa ccgccgccgt cggcaacccg atgccgtctg
     8581 aagcggcaat cgaaaccgcg acggtttccg tcatgcagga actcgacggc tgccgcgccc
     8641 ccgccgtcct tttcctcggg caggcttttg tccagcctga acggcaaacg atgattgaaa
     8701 ctttgtgcgg cagccgtccc ttcttcatca tcgaccatcc cgcccggctt ttacgccaac
     8761 ccgaactcaa agcccgcgcc tggcaggtgt tgaaacagtt gaaacgcgcc ttgcggcaag
     8821 gcggcggcag ttgaagcgcg ccgcacgggg cggtagaatc gcaactgcgt cccaatatct
     8881 gacagaaagc acaaaatgac cgatttccgc caagatttcc ttaaattctc cctcgcccaa
     8941 aatgttttga aattcggcga attcaccacc aaagccggac ggcggtcgcc ctatttcttc
     9001 aatgccggtc tctttaacga cggcttgtcc acgctgcaac tggcaaaatt ctatgcacaa
     9061 tccatcattg aaagcggcat ccgattcgat atgctgttcg gtcccgccta caaaggtatt
     9121 attttggcgg cggcaaccgc gatgatgctg gcggaaaaag gcgtaaacgt cccgtttgcc
     9181 tacaaccgca aagaagccaa agaccacggc gaaggcggcg tgttggtcgg tgcgccgctt
     9241 aaagggcgcg tgctgattat cgacgacgtg atttctgccg gcacatccgt acgcgaatcg
     9301 atcaagctga ttgaagcgga gggcgcaacc cccgccggcg tcgccatcgc gctcgaccgc
     9361 atggaaaaag gcaccggcga attgagcgcg gttcaggaag tggaaaaaca atacggtctg
     9421 cccgtcgccc ccatcgccag cctgaacgat ttgttcatcc tgttgcaaaa caaccccgaa
     9481 ttcggacagt tcctcgaacc cgtccgagcc taccgtcggc agtacggcgt agaataaaaa
     9541 caaagcatat gccgtctgaa ccgccttacg cctcagacgg catcaaaccc ctgacacaca
     9601 cgaggaaata ccatgcccgc ctgtttctgc ccccactgca aaacccgtct ctgggtcaaa
     9661 gaaacccaac tcaatgtcgc ccaaggcttc gtcgtctgcc aaaaatgcga aggactgttt
     9721 aaagccaaag accatctggc aagcacgaaa gaacccatat tcaacgattt gcccgaggct
     9781 gtttcggatg tcaaactcgt tcaccgtatc ggcacgcgcg ccatcggcaa gaaacagatt
     9841 tcccgtgacg aaatcgccgg catcctcaac ggcggcacaa cccagcccga tattccgccc
     9901 gcaaccgccg ccacccctgc tgccgcaccg caggttaccg taccgcccgc cgcgcccgcc
     9961 cgtcaggatg ggttcaactg gacgattgca accctgtttg cccttatcgt cctcattatg
    10021 cagctttcct acctcgtcat cctatgatcg tgcccgacct ctttgtcgcc cacttccgcg
    10081 aagccgtccc ctacatccgc caaatgcgcg gcaaaacgct ggtcgccggc atagacgacc
    10141 gcctgctcga aggtgatacc ttaaacaagc tcgccgccga catcgggctg ttgtcgcaac
    10201 tgggcatcag gctcgtcctc atccacggcg cgcgccactt cctcgaccgc cacgccgccg
    10261 cgcaaggccg cacgccgcat tattgccggg gcttgcgcgt taccgacgaa acctcgctcg
    10321 aacaggcgca gcagtttgcc ggcaccgtcc gcagccgttt tgaagccgca ttgtgcggca
    10381 gcgtttccgg gttcgcgcgc gcgccttccg tcccgctcgt atcgggcaac ttcctgaccg
    10441 cccgtccgat aggtgtgatt gacggaaccg atatggaata cgcgggcgtt atccgcaaaa
    10501 ccgacaccgc cgccctccgt ttccaactcg acgcgggcaa tatcgtctgg ctgccgccgc
    10561 tcggacattc ctacagcggc aagaccttct atctcgatat gcttcaaacc gccgcctccg
    10621 ccgccgtctc gcttcaggcc gaaaaactcg tttacctgac cctttcagac ggcatttccc
    10681 gccccgacgg cacgctcgcc gaaaccctct cggcacagga agcgcaatcg ctggcggaac
    10741 acgccggcgg cgaaacgcga cggctgattt cgtccgccgt tgccgcgctc gaaggcggcg
    10801 tgcatcgcgt ccaaatcctc aacggagccg ccgacggcag cctgctgcaa gaactcttca
    10861 cccgcaacgg catcggcacg tccattgcca aagaagcctt cgtctccatc cggcaggcgc
    10921 acagcggcga catcccgcac attgccgccc tcatccgccc gctggaagaa cagggcatcc
    10981 tgctgcaccg cagccgcgaa tacctcgaaa accacatttc cgaattttcc atcctcgaac
    11041 acgacggcaa cctgtacggt tgcgccgccc tgaaaacctt tgccgaagcc gattgcggcg
    11101 aaatcgcctg ccttgccgtc tcgccgcagg cacaggacgg cggctacggc gaacgcctgc
    11161 ttgcccacat tatcgataag gcgcgcagta tgggcataag caggctgttc gccctctcca
    11221 caaataccgg cgaatggttt gccgaacgcg gctttcagac ggcatcggaa gacgagttgc
    11281 ccgaaacgcg gcgcaaagcc taccgcagca acggacggaa ctcgcatatt ctggtacgtc
    11341 gcctgcaccg ctgaccgcaa cggaaagccg ccgcagaaat gccgtctgaa ccccgtttca
    11401 gacggcattt ccccgattat atagtggatt aacaaaaacc agtacggcgt tgcctcgcct
    11461 tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
    11521 tataaagacc tgcccaaccc tcaaggaccc cgatgaaatc ctaccccgac ccctaccgcc
    11581 attttgaaaa cctcgattcc gccgaaacgc aaaacttcgc tgctgaagcg aatgccgaaa
    11641 cgcgcgcgcg ttttttaaac aacgacaagg cacgcgcatt gtctgacggc attttggcgc
    11701 agttgcagga cacgcggcaa attccgtttt gtcaggaaca ccgcgcgcgg atgtaccatt
    11761 tccatcagga cacggaatat ccgaagggcg tgtaccgcgt gtgtacggcg gcgacttacc
    11821 gttccggcta tcctgagtgg aaaatcctgt tttcggtggc ggatttcgac gaattgctcg
    11881 gcgacgatgt gtatttgggc ggcgtgtcgc acttggtgga acagcccaac cgcgcgttgt
    11941 taacactgag caaatcgggc ggcgatacgg cgtacacgct ggaagtggat ttggaagcag
    12001 gggaattggt agaaggcggt tttcactttc cggcaggtaa aaaccatgtg tcgtggcgcg
    12061 atgaaaacag cgtatgggtg tgtccggctt gggacgaacg ccagttgacc gaatcgggct
    12121 atccgcgcga ggtgtggctg gtggaacgcg gcaaaagttt cgaggaaagc ctgcctgtgt
    12181 atcaaatcga taaagatgca atgatggtga acgcgtggcg ttatctcgat ccgcagggtt
    12241 cgccgattga tttgattgaa gcgtcggacg gtttttacac caaaacctat ttgcaggtgt
    12301 cgtcggaaag cgaggcgaaa ccgttaaacc tgcccaacga ttgcgacgtg gccggctatc
    12361 tggccggaca tcttttgctg acgttacgta aagactggaa ccgcgcgaac caaagctatc
    12421 cgagcggcgc attggtggcg gtgaagctga atcggggcga actcggggcg gcacagcttt
    12481 tgtttgcgcc cgatgaaacg caggcattgg aaagcgtgga aacgaccaag cgttttgtgg
    12541 tggcgagcct gctggaaaac gtacaaggcc gtctgaaagc gtggcggttt gccgatggca
    12601 aatggcagga agctgagttg ccgcgcctgc cttcgggcgc gttggaaatg accgatcagc
    12661 cttggggcgg cgacgtggtt taccttgccg ccagcgattt caccacgccg ctgacgctgt
    12721 ttgcgctgga tttgaacgtg atggaactga ccgtcatgcg ccgccagccg cagcagtttg
    12781 attcagacgg cattaacgtg cagcagtttt ggacgacttc ggctgacggc gagcgcattc
    12841 cttatttcca cgtcggcaaa aacgccgcgc ccgacatgcc gacgctggtc tatgcctacg
    12901 gcggtttcgg cattcccgaa ttgccgcatt atctgggcag cattggcaaa tattggctgg
    12961 aagagggcaa tgcctttgta ttggcgaaca tccgcggcgg cggcgagttc ggcccgcgct
    13021 ggcatcaggc ggcgcagggc atcagcaaac ataaaagcgt tgatgattta ttggcagtcg
    13081 tgcgcgattt gtccgaacgc ggcatgagtt cgcccagaca catcggtttg cagggcggca
    13141 gcaacggcgg cctgattacc gccgctgcct tcgtgtgcga accgcaaagc atcggcgcgc
    13201 tggtgtgcga agtaccgctg accgacatga tccgttatcc gctattgtcc gccggttcaa
    13261 gttggacgga cgaatacggc aatccgcaaa aatacgaagt ctgcaaacgc tggctgggcg
    13321 aattgtcgcc gtatcacaat ctttcagacg gcatcgatta tccgcctgcg ctcattacca
    13381 ccagcctcag cgacgaccgc gtccatcctg cccacgcgct caagttttac gccaaactgc
    13441 atgaaacctc ggcgcaatct tggctctact cgcctgacgg cggcggccat accggcaacg
    13501 gcacccaacg cgaatccgcc gacgaactcg cctgcgtctt gctgtttttg aaagagtttt
    13561 tgggctaagg gcggggagcg gcactgccgc cgcgaatgaa aaaaggtcgt ctgaaactgc
    13621 tttttcagac gacctttttt aatggttgtt tcaaatcaaa atatctatgc cgccggcccc
    13681 atcagcactt cttcacatcc gaaggcaaaa atccgtaatg ccgtctgaac gcttcgttga
    13741 accgtcccgc gtggcggtag ccgcaaaagt gcatggcggc ttggacggtg ctgccggatt
    13801 cgatgagggc gagcgcgtgt tccagccgca ggcggcgcag gcatccggcg acggtttcac
    13861 cggtttgcgc tttgaaatag cgtttcaggt agcattcgtt cagtccgacg cggcgggcga
    13921 tttcggcgat ggtcagcgga cgggcgaatt cgtgttgcag gatgtcggcg gcttcgtcta
    13981 tgcgccggcg gcggtaaccg ttgtcgtggc ggcggaaggt gaagcgcaat aatcgggcgg
    14041 agagttccag cgcggcggct tcgtcggcaa gcaggccgaa gccgtccgat tcgaacgggc
    14101 gttgcagcag tgggcaggcc gccgccgtca gtgccgctgc gttttgcgcc agccgttgca
    14161 gggcgaatcg gcctattgtt tgcggcgaaa acaggcgttc gtccagcaag ccttcgtcgt
    14221 gccagcggcg cagtttttcc agcgaaaaat ccaaatgcag cgcgcacatg ccgctgttgt
    14281 cgggcagcag ggtttcggat acgtccgcca actcgccgcg taccagccag atttcgccgg
    14341 cagacgggcg gtattccctg ccgcccattt gtaaccggtt ctgccccgac accatgacga
    14401 acaaggcgca gttgtggctg aaattgtgga tttcggtggg aaacgcgccc gttccgccgc
    14461 cgcgcatccg cgacaaggtg atgcccgagt cgaagcggtt gatgcacatt tccagatgca
    14521 aaccgggctg ttttgcctgc gcaatgagcg cgctgtcgga acagccgtcc aacgcccagc
    14581 cggatttatc ggagcggaca taggtttggt actggcggta gatggcggcg gtgttcatga
    14641 ttggatagga acgagttgtc taacaaatga attaaatagg aattattacc aataatcaag
    14701 cgcagggatt ggttgaaacg gaaaaggtcg tctgaaaggg tgtttcagac gaccttttcc
    14761 gtatcgggaa tttgttttgc cgtatcggga attttgcgtt ttgcggcgtg gtttctgcag
    14821 gttgtttgct taataataaa cattcttatt cgtatgcaaa ggaaccgcac accgtgaaac
    14881 cgcgttttta ttgggcagcc tgcgccgtcc tgctgaccgc ctgttcgccc gaacctgccg
    14941 ccgaaaaaac tgtatccgcc gcatccgcat ctgccgccac actgaccgtg ccgaccgcgc
    15001 ggggcgatgc cgttgtgccg aagaatcccg aacgcgtcgc cgtgtacgac tgggcggcgt
    15061 tggatacgct gaccgaattg ggcgtgaatg tgggcgcaac caccgcgccg gtgcgcgtgg
    15121 attatttgca gcctgcattt gacaaggcgg caacggtggg gacgctgttc gagcccgatt
    15181 acgaagccct gcaccgctac aatcctcagc ttgtcattac cggcgggccg ggcgcggaag
    15241 cgtatgaaca gttggcgaaa aacgcgacca ccatagatct gacggtggac aacggcaata
    15301 tccgcaccag cggcgaaaag cagatggaga ccttggcgcg gattttcggc aaggaagcgc
    15361 gcgcggcgga attgaaggcg cagattgacg cgctgttcgc ccaaacgcgc gaagccgcca
    15421 aaggcaaagg acgcgggctg gtgctgtcgg ttacgggcaa caaggtgtcc gccttcggca
    15481 cgcagtcgcg gttggcaagt tggatacacg gcgacatcgg cctaccgcct gtagacgaat
    15541 ctttacgcaa cgaggggcac gggcagcctg tttccttcga atacatcaaa gagaaaaacc
    15601 ccgattggat tttcatcatc gaccgtaccg ccgccatcgg gcaggaaggg ccggcggctg
    15661 tcgaagtatt ggataacgcg ctggtacgcg gcacgaacgc ttggaagcgc aagcaaatca
    15721 tcgtcatgcc tgccgcgaac tacattgtcg cgggcggctc gcggcagttg attcaggcgg
    15781 cggagcagtt gaaggcggcg tttgaaaagg cagaacccgt tgcggcgggg aaagagtagg
    15841 gagtcgtctg aaaacggagc ttccgaagga agcggggggt ttctgcgaag ctaaagtgcg
    15901 gtttcaacga attgaaaagc agcctgtatt ttgaaaatac cgctcaagca aacctacggt
    15961 ttgccgccct ctccctagcc ctctcccaca gggagagggg attgggttgc aggctgcctt
    16021 taaggtttag gcaaattttt aacttcgttg aagctccgtt ttcagacgac cttttggaac
    16081 accacaggca cacgcatcga acggctgaat caaagattca gaccgatggc agtccgcacc
    16141 cgagtttatg cggcaaacag cgaggctacg gcaacccgcc ccctctccct gtgggagagg
    16201 gttagggaga gggcggtaag ccgcaggctt acatcaaagt cgataacgct ttcgttacaa
    16261 ctccgcccac tgaacgaagc caaaacgaca aaccgcatcg taaaccaccc aacccatagg
    16321 agaaccccat gcaaaacgaa accatcaacc tgaaacagca ccttgccgcc atcaaagaat
    16381 actggcagcc cgaaatcatc aaccgccacg ggttccaatt ccgtttggtc aaacttttgg
    16441 gcgattacgg ctggcatacg cacggataca gcgacaaagt gctgtttgcc gtggagggcg
    16501 acatggcggt ggacttcgcc gacggcggca gcatgacgat acgcgagggc gagatggcgg
    16561 tcgtgccgaa gtcggtgtcg caccgcccgc gttcggaaaa cggctgctcg gtggtgctga
    16621 ttgagttgtc cgacccgtcc gaggccgtct gaaaacgaag tttccgaagg aagctgagtt
    16681 tctgcgaagc taaaagcagc ctgcaccttc aatcaatatg ccgaaaatac aaccccaccg
    16741 cacaccaaca cacaaaggaa atcccatgac acgcttcaaa tattccctgc tgtttgccgc
    16801 cctgttgccc gtgtacgcgc aggccgatgt ttctgtttca gacgacccca aaccgcagga
    16861 aagcactgaa ttgccgacca tcaccgttac cgccgaccgc accgcgagtt ccaacgacgg
    16921 ctacactgtt tccggcacgc acaccccgct cgggctgccc atgaccctgc gcgaaatccc
    16981 gcagagcgtc agcgtcatca catcgcaaca aatgcgcgac caaaacatca aagcgctcga
    17041 ccgcgccctg ttgcaggcga ccggcaccag ccgccagatt tacggctccg accgcgcggg
    17101 ctacaactac ctgttcgcgc gcggcagccg catcgccaac taccaaatca acggcatccc
    17161 cgttgccgac gcgctggccg atacgggcaa tgccaacacc gccgcctatg agcgcgtaga
    17221 agtcgtgcgc ggcgtggcgg ggctgctgga cggcacgggc gagccttccg ccaccgtcaa
    17281 tctggtgcgc aaacgcccga cccgcaagcc attgtttgaa gtccgcgccg aagcgggcaa
    17341 ccgcaaacat ttcgggctgg gcgcggacgt atcgggcagc ctgaatgccg aaggcacgct
    17401 gcgcggccgc ctggtttcca ccttcggacg cggcgactcg tggcggcagc gcgaacgcag
    17461 ccgcgatgcc gaactctacg gcattttgga atacgacatc gcaccgcaaa cccgcgtcca
    17521 cgcaggcatg gactaccagc aggcgaaaga aaccgccgac gcgccgctca gctacgccgt
    17581 gtacgacagc caaggttatg ccaccgcctt cggcccgaaa gacaaccccg ccacaaattg
    17641 ggcgaacagc cgccaccgtg cgctcaacct gttcgccggc atcgaacacc gcttcaacca
    17701 agactggaaa ctcaaagccg aatacgacta cacccgcagc cgcttccgcc agccctacgg
    17761 cgtagcaggc gtgctttcca tcgaccacaa caccgccgcc accgacctga ttcccggtta
    17821 ttggcacgcc gacccgcgca cccacagcgc cagcgtgtca ttgatcggca aataccgcct
    17881 gttcggccgc gaacacgatt taatcgcggg tatcaacggt tacaaatacg ccagcaacaa
    17941 atacggcgaa cgcagcatca tccccaacgc cattcccaac gcctacgaat tttcccgcac
    18001 gggcgcctat ccgcagccat catcgtttgc ccaaaccatc ccgcaatacg gcaccaggcg
    18061 gcaaatcggc ggctatctcg ccacccgttt ccgcgccgcc gacaaccttt cgttgatact
    18121 cggcggcaga tacagccgtt accgcaccgg cagctacgac agccgcacac aaggcatgac
    18181 ctatgtgtcc gccaaccgtt tcacccccta cacaggcatc gtgttcgacc tgaccggcaa
    18241 cctgtcgctt tacggctcgt acagcagcct gttcgtcccg caatcgcaaa aagacgaaca
    18301 cggcagctac ctgaaacccg taaccggcaa caatctggaa gccggcatca aaggcgaatg
    18361 gcttgaaggc cgtctgaacg catccgccgc cgtgtaccgc gcccgtaaaa acaacctcgc
    18421 caccgcagca ggacgcgacc cgagcggcaa cacctactac cgcgccgcca accaagccaa
    18481 aacccacggc tgggaaatcg aagtcggcgg ccgcatcacg cccgaatggc agatacaggc
    18541 aggttacagc caaagcaaaa cccgcgacca agacggcagc cgcctgaacc ccgacagcgt
    18601 acccgaacgc agcttcaaac tcttcactgc ctaccacttt gcccccgaag cccccagcgg
    18661 ctggaccatc ggcgcaggcg tgcgctggca gagcgaaacc cacaccgacc ctgccacgct
    18721 ccgcatcccc aaccccgccg ccaaagcccg cgccgccgac aacagccgcc aaaaagccta
    18781 cgccgtcgcc gacatcatgg cgcgttaccg cttcaatccg cgcgccgaac tgtcgctgaa
    18841 cgtggacaac ctgttcaaca aacactaccg cacccagcct gaccgccaca gttacggcgc
    18901 actgcggaca gtgaacgcgg cgtttaccta tcggtttaaa taaggtcgtc tgaaaacgga
    18961 gtttctgcga ag
//
LOCUS       DBBZXW010000029        17488 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.029, whole genome shotgun sequence.
ACCESSION   DBBZXW010000029 DBBZXW010000000
VERSION     DBBZXW010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.029"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            188..304
                     /locus_tag="ACJJD2_000928"
                     /pseudo
     CDS             188..304
                     /locus_tag="ACJJD2_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(337..1428)
                     /gene="mltB"
                     /locus_tag="ACJJD2_000929"
     CDS             complement(337..1428)
                     /gene="mltB"
                     /locus_tag="ACJJD2_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HGG7579488.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRVNEAQAPRADEMKKES
                     RPAFDTAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGKAKFRGARRFYAENRAVVDDVAQKYGVPAELIVAIIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1577..3004)
                     /locus_tag="ACJJD2_000930"
     CDS             complement(1577..3004)
                     /locus_tag="ACJJD2_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HGG7579489.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            3189..6872
                     /gene="mfd"
                     /locus_tag="ACJJD2_000931"
     CDS             3189..6872
                     /gene="mfd"
                     /locus_tag="ACJJD2_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HGG7579490.1"
                     /translation="MTYPIPKPREKSRWLNLSQGSLPLALARYLPHRRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDNEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLP
                     DVSGKEYTLPDLAVNRQADEPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPSQQQAAPASEGEGDAITDQTE
                     FSASATNPLPSPLPQEREQSTAAISDSLKTKSSLYPIENSLHGQIQQQPAPSPVGEGW
                     GEGKAVAAQSAIAVITESDLYQYVARSRIHNRRKKHAAVSDDLLRDLAEINIGDPVVH
                     EEHGIGRYMGLITMNLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALH
                     KLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYEE
                     TEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTT
                     LLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDD
                     IKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSL
                     ITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLL
                     PEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKF
                     GLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLE
                     IRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSP
                     ALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLR
                     LMAKELGINAIDAAGEAVTVTFGKNNNIDPTEIILLIQNDKKYRLAGADKLRFTAEME
                     NIEVRINTVKNVLKTLQNRCLPK"
     gene            7021..7404
                     /gene="panD"
                     /locus_tag="ACJJD2_000932"
     CDS             7021..7404
                     /gene="panD"
                     /locus_tag="ACJJD2_000932"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HGG7579491.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            7426..8268
                     /gene="kdsA"
                     /locus_tag="ACJJD2_000933"
     CDS             7426..8268
                     /gene="kdsA"
                     /locus_tag="ACJJD2_000933"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HGG7579492.1"
                     /translation="MDIKINDFTLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFHEAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            8283..8723
                     /locus_tag="ACJJD2_000934"
     CDS             8283..8723
                     /locus_tag="ACJJD2_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HGG7579493.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIVAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSALGGSFGMWHGISSIVFMAAALLSIYLSWRLYGKNAV"
     gene            8768..10054
                     /gene="eno"
                     /locus_tag="ACJJD2_000935"
     CDS             8768..10054
                     /gene="eno"
                     /locus_tag="ACJJD2_000935"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HGG7579494.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYLGKGVLKAVDHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDAGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPSKAAFYQLGK"
     gene            10068..10346
                     /gene="ftsB"
                     /locus_tag="ACJJD2_000936"
     CDS             10068..10346
                     /gene="ftsB"
                     /locus_tag="ACJJD2_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HGG7579495.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(10387..10677)
                     /gene="yfaE"
                     /locus_tag="ACJJD2_000937"
     CDS             complement(10387..10677)
                     /gene="yfaE"
                     /locus_tag="ACJJD2_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HGG7579496.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
     gene            complement(10694..10810)
                     /locus_tag="ACJJD2_000938"
                     /pseudo
     CDS             complement(10694..10810)
                     /locus_tag="ACJJD2_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(10912..12045)
                     /gene="nrdB"
                     /locus_tag="ACJJD2_000939"
     CDS             complement(10912..12045)
                     /gene="nrdB"
                     /locus_tag="ACJJD2_000939"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HGG7579497.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(12106..13293)
                     /locus_tag="ACJJD2_000940"
     CDS             complement(12106..13293)
                     /locus_tag="ACJJD2_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction endonuclease"
                     /protein_id="HGG7579498.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(13286..14299)
                     /gene="dcm"
                     /locus_tag="ACJJD2_000941"
     CDS             complement(13286..14299)
                     /gene="dcm"
                     /locus_tag="ACJJD2_000941"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HGG7579499.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KNE"
     gene            complement(14357..16636)
                     /gene="nrdA"
                     /locus_tag="ACJJD2_000942"
     CDS             complement(14357..16636)
                     /gene="nrdA"
                     /locus_tag="ACJJD2_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HGG7579500.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTSQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPNIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPCVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            17165..17476
                     /locus_tag="ACJJD2_000943"
     CDS             17165..17476
                     /locus_tag="ACJJD2_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HGG7579501.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         4383 a         4608 c         4170 g         4327 t
ORIGIN      
        1 ttttggaatc aggcaaaacg cgtcttgcga aaatatagtg gattaacaaa aatcaggaca
       61 aggcgacgaa gccgcagaca gtacggatag tacggaaccg atttacttgg tgcttcagca
      121 ccttagagaa tcgttctctt tgagctaagg cgaggcaacg ctgtactggt ttaaatttaa
      181 tccactatac aacggaatcg attgcaaatc tttcccactg ttcttgaaag aatgtgaatt
      241 tcgatttaac ttcggcacac cgtctcaaca gcttaaaatc ctgcgggatt ggtgtgggat
      301 ttagggctaa tctagtacag ccccttttaa aaaacattac aatcccgggc cgccaagcga
      361 attggcaatg tccctgaccg ccgttacata catccggctg tggttgtact gccataccgt
      421 ataaaaattg ttcaagccca aataatattc aaacacgccc ggtgcggttt ccagtttgaa
      481 caaaaccgcc ttttcatcat cggcaagctc ttcgccgggg atgatgccgt acgccttcaa
      541 atccgccacc gtccgcgtca gggcggtttt ttcgccaatg attgcctgaa catccgcacc
      601 cggcgccaat gttgcagaca ccagcatttt accgcccgtg cgccaaccgt gctgcttcat
      661 ataattggca accgatgccg cgacatcgcc gacgttgccc catatgtccc gatgtccgtc
      721 cccgtcataa tccaccgccc atttccggta gctcgaaggc ataaattgcg gcatacccat
      781 tgcacccgca tagctgccct taaaggcgaa aacatcgccg ccctcttctt ttgccagctt
      841 taaaagctcg accaattctt tttggaaaaa cccggcgcgg cgggggtaat cgaaacctaa
      901 agtcgccaat gcgtccgcca cgcggaaact gcccgtattt ttgccgtaat tcgtttcaat
      961 cccgataatc gccacgataa gctcggcggg cacgccgtat ttttgcgcca catcatcgac
     1021 aactgcgcgg ttttccgcat aaaaccggcg cgcgccgcga aatttcgcct tgcccgaatt
     1081 tcccgtgcgg aacacatacc acggacgcga tgtggagggt cggtgcataa tcttgacgat
     1141 gtccgccttg taagccgctt tgtcaaaaaa atcctgccat tccgcccggg aaaaatcccc
     1201 tttcccgact tcatcgtcca caaaacggcg gacatttgca ttggcggcaa acccgctgtc
     1261 ggataccggt acggctgccg tgtcaaacgc ggggcggctt tcttttttca tttcatccgc
     1321 gcggggggct tgggcttcat ttacccgggg cgggcgtgcc tccatcgccg tacaggcaga
     1381 caaagccgcc aaacaaattg ccagcggcag tatttttctc tttttcataa atatgttccg
     1441 aacaaatagg gtaagtggga aagcggcgca aggggcgcgg tgcgaaatgc ggcatccgcc
     1501 gcaatcggcg gctttgtgga ataccgcgcg ttgccttttg caccgcctga aatccgtatg
     1561 ccgccgtatt tgcccgctat ccgcaatatc ggcagtccaa tatatctttg cggatgtcgt
     1621 tcagcaggaa ggctgcggtg tcttcgtgtt ccgcctgtac gaagacaaag agtcgggcga
     1681 tgattttgcc gatgaagact ttttgcaggg cgcaggcgtc ggtcagggtg tgttcctgca
     1741 ggaagctgcg gatgtcttcg ggcaaagtgt agtcgcgggc gacggcggca aagcgggcat
     1801 cggtttgcag gcggtcgagc agggtttggt ttttgtccaa cttcatgcct gcttcttttt
     1861 cttcggcggt ggcgcggacg aactggtcgt aaatttcggc ataaagcata tcgttcgggc
     1921 cttcaaaaat cgtgaagggg cggatgtcga tagcgatatt gccggcggtg tgtccgcgtt
     1981 caaaaccctt cgcgcccaaa agtttttgca acatttgcgc ggcggcgtaa gtgtattccg
     2041 tggcgagggt tttgacgatg ttcgcctcca tcagctgatg ggcgacgggg gcaacaggtg
     2101 aaacggaatg gcagacgtag cggtaaagaa tctcggaaac ctgatggcgg cgccggattt
     2161 cgcggcgttc gtaatcgacg aatctgatgt cgttgcggac gtatcgttcc aggttttcaa
     2221 ggatgtattc cataatgccg tgcgtcatgc cgatcagttg caggcggctg cggataaaga
     2281 tgttttggaa cgcgcgcaaa ccggcagcgt cgctctggga gagtttcatc acggcggttg
     2341 caggcatttc ggcatcgatg cggttgacgg cgtaacggac ggcgcgcaag ccttcggatg
     2401 cgagggtttc gcagcggatg tatgttttgg ggacgagcag caggtcgatg actttggcga
     2461 gtttgccgtt tttgcgctct ttggcggcaa cgaggaggaa gtcgctttgc gagttgccct
     2521 gccagtattt cgcggcgttg acgtaaatgg tttgtccgtc ggtatattcg tagtaagact
     2581 gcatttctcg ggcaatcgcc gcgccggagg tttcgggttc ggtaacgccc aaaccaccgc
     2641 cctcgccttt gaaaaccatg tccaaaccct gtgcgatttg cgcttcatcg ccgaactctt
     2701 gcagtggctg caacaccagc gcgccttcga tgccggtacg cagcgtaacg ggcacgccgt
     2761 aatgccccgc aatccgcaag acttcctgaa tttcaaactg gctgcccttg cgcccgccgt
     2821 gttttttgtc gaggaagggc aacagcaaac ccgcctgctt caaggcaagc catttgtctt
     2881 cgggcaggta tcgcatcagg tcgataccgt ctgaaaaaat gcggcggaat gcggattcga
     2941 tgtgctttaa aaaagcagcc gtgtccatag ttgacggctg cgcactcggt tcggtgtgta
     3001 tcatcggctt cctctgtcgg ttcccattaa tcggcggccg gtcaaaccgc ctgccacggt
     3061 ttagagttaa ttttctaaac tttaccacaa agtgcgccgg gcaacaatcc gccgaccttt
     3121 cagacggcat cgcgccccct cccgtgctaa aatgaccgtt tgcatcactg tccgccgatt
     3181 gccgcactat gacctacccc atccccaaac cccgtgaaaa atcccgttgg ctcaatctgt
     3241 ctcaaggctc gctacccttg gctttggcgc gttatctgcc gcataggcgg ctcaaagtcg
     3301 tgctgaccca agatgcggaa caggcgctac gccttcagac ggcgtggcgg tttttccgtc
     3361 cgcacgatac ggcggtgttc ctgccggact gggaaacgct gccttacgag cgtttttcgc
     3421 cgcatcagga tttggtgtcg gagcgtttgt cggcgttgtg gcagattaaa agcggcgcgg
     3481 cggacgtgtt gttcgtgccg gttgccacgg cgatgcagaa gctgccgccc gtgccgtttc
     3541 tggcggggcg cacgttttgg ctgaaaacgg gacagacttt ggatataggc cgtctgaaaa
     3601 gcgatttggt ggatgcaggt tataaccatg tttcccacgt tgtcgcggca ggcgagtttg
     3661 ccgtgcgcgg cggcattgtg gatttgttcc cgatgggcag cgaaatgccg taccgcatcg
     3721 atttgttcga cgatgaaatc gacagcatca aaacctttga caccgagacg cagcgcacca
     3781 tctcccccgt ttccgaaatc cgtctgctgc cggcgcacga gttccccacc gacaacgagg
     3841 cgcaaaaaat cttccgcagc cgttttcgcg aggaagtcga tggcaatccg aacgatgccg
     3901 ctgtgtacaa agccgtcagc aacggtcatt tcggcgcggg cgtggaatac tacctgccgc
     3961 tgttttttga aaacgagttg gaaacgctgt ttgactatat cggcgaagat gcgctgtttg
     4021 tctctttagg cgatgttcat gccgaggcaa accgtttttg gagcgatgtc aaatcgcgtt
     4081 acgcgatggc gcagggcgac gaaacctatc cgcctttgct tccacagtat ttgtatctct
     4141 ctgccgatgt gttcgcaggc cgtctgaaaa actacggaca ggtgctgccc gatgtttccg
     4201 gcaaggaata caccctgccc gaccttgccg tcaaccgcca agcagatgag ccgttgcagg
     4261 cattgaagga ttttcagacg gcgtttgacg gacggatttt gctgtgcgcc gaaagtttgg
     4321 gacggcgcga aactatgctc ggtttcttgc agcaaaacgg tttgaaagcc aaacccgtgt
     4381 ccgactggca gggcttttta tcggcacacg agccgctgat gattactgtt gcgccgttgg
     4441 catacgggtt caaactgggc gggctgcaat ctccgagcca acagcaagct gctcccgcct
     4501 ccgaaggaga aggcgatgcg attaccgacc aaaccgaatt ttccgcatcc gcaacaaacc
     4561 ctctccctag ccctctccca caggagaggg aacaaagtac cgccgccatt tcagacagtc
     4621 tgaaaaccaa aagcagcctg taccccatcg aaaatagtct gcacgggcaa atccaacagc
     4681 aacctgcccc ctcccccgtg ggggagggtt ggggagaggg caaagcagtt gccgctcaaa
     4741 gtgccatcgc cgtcatcacc gaatccgatc tctaccaata cgtcgcccgt tcgcgcatcc
     4801 acaaccgccg caagaaacac gccgccgttt cagacgacct gttgcgcgac cttgccgaaa
     4861 tcaacatcgg cgaccccgtc gtgcacgagg aacacggcat cggccgatat atgggcttga
     4921 taacaatgaa cttgggcggc gaaaccaacg aaatgatgtt gctcgaatat gcgggcgaag
     4981 cgcagcttta tgtgcctgtt tcgcaactgc atttaatcag ccgctactcc ggtcaggcgc
     5041 atgaaaacat tgccctgcac aagctcggca gtggcgcgtg gaacaaggcg aagcgcaaag
     5101 ccgccgaaaa ggcgcgcgat accgccgccg agttgcttaa cctttacgcc cgacgtgccg
     5161 cccaatcggg acacaagttt gaaatcaacg agttggatta tcaggcgttt gccgacggct
     5221 tcggctacga agaaaccgaa gaccaggccg ccgccatcgc cgccgtgatt aaagatttga
     5281 cgcaggcgaa gccgatggac cgcctcgtgt gcggcgatgt cggtttcggc aaaaccgaag
     5341 tcgccctgcg cgccgcattt gtggcggtga tgggtggcaa acaggtcgcc gtactcgccc
     5401 cgaccacgct tctggtcgag cagcacgcgc aaaactttgc cgaccgtttc gccgatttcc
     5461 ctgtgaaagt cgccagcctt tcgcgtttca acaacagcaa agccactaaa gccgcgctgg
     5521 aaggcatggc ggacggcacg gtcgacatcg ttatcggcac gcacaaactg gtgcaggacg
     5581 acatcaaatt caaaaactta ggtttagtga ttatcgacga agaacaccgc ttcggtgtcc
     5641 gccaaaaaga gcagctcaaa cgcctgcgcg ccaatgtgga catcctcacc atgaccgcca
     5701 cgccgattcc gcgtacttta agtatggcgt tggaaggact gcgcgacttc tcgctgatta
     5761 ccaccgcgcc cagccgccgc ctcgccgtca aaacctttgt caaacccttt agcgaaggca
     5821 gcgtgcgcga agccgtgttg cgcgaactca aacgcggagg acaggtattt ttcctgcaca
     5881 atgaagtaga tacgattgaa aatatgcgcg agcggctgga aaccctgctg cccgaagccc
     5941 gcatcggcgt ggcgcacgga caactgcgcg agcgcgagct ggaacaagtc atgcgcgact
     6001 ttttgcagca acgatttaac gtgttgctct gctccaccat catcgaaacc ggcatcgaca
     6061 tccccaacgc caacaccatc atcatcaacc gcgccgacaa attcgggctg gcgcaactgc
     6121 accagcttcg cgggcgcgtc ggccgcagcc accatcaagc ctacgcctac ctgctcacgc
     6181 ccgaatacat caccaaagac gcagaaaaac gcctcgacgc catcgcggcg gcagacgaac
     6241 tcggcgcagg tttcaccctc gccatgcagg atttggaaat ccgcggcgca ggcgaaatcc
     6301 tcggcgaagg gcagtccggt gaaatgatgc aggtcggctt cacgctctac accgaaatgc
     6361 tcaaacaggc cgtgcgcgac ctcaaaaaag gccgccaacc cgacctcgat gcaccgttgg
     6421 gcattaccac cgaaatcaaa ctgcacagcc ccgccctgct gcccgaaagc tactgccccg
     6481 acatccacga acggctcgtc ctctacaaac gcctcgccgt ctgcgaaacc gtacagcaaa
     6541 tcaatgccat acacgaagaa ctcgtcgacc gcttcggact gcccgagcaa cccgtcaaaa
     6601 cccttatcga aagccaccac ttacggctta tggcaaaaga attgggtatc aatgccattg
     6661 atgcggccgg cgaagcggta acggtaacct ttggcaaaaa caacaatatt gatccaaccg
     6721 aaatcatcct gctgattcag aacgacaaaa aataccgcct tgccggcgcc gataagctgc
     6781 ggtttaccgc agagatggaa aatatcgagg tcagaatcaa caccgtaaaa aacgttttaa
     6841 aaaccttgca aaacagatgc ctgcccaaat aaagccgaca ccgcaatgct gtctgaaaca
     6901 ccgttttcct tgtccgaaag ccgccattat gaatttgaag gaaactccac tataatacgg
     6961 cattcagatt ttcagacggc atcgcgcccg tcaaaccgca cacaaaccaa aaggaaatac
     7021 atgttccgta ctatgcttgg cggaaaaatc caccgcgcca ccgttaccga agccgattta
     7081 aactatgtcg gcagcattac cgtcgatcaa gacctgttag acgcggcagg catctacccc
     7141 aacgaaaaag tcgccatcgt caacaacaac aacggcgaac gttttgaaac ctataccatt
     7201 gcagggaaac gcggcagcgg cgtgatttgt ctgaacggtg ctgcggcaag gctggtgcag
     7261 aaaggcgata tcgtcatcat catgtcttac gtccaactct ccgaacccga aatcgccgcg
     7321 catgaaccca aagtcgtctt ggtagacgga aacaacaaaa tccgcgacat catctcctat
     7381 gagccgccgc acaccgtgct gtaattccgc aaacggacat cgattatgga tattaaaatc
     7441 aacgacttca ccctcggcaa caactcgccc ttcgtcctat tcggcggcat caacgttttg
     7501 gaaagcttgg attccaccct ccaaacctgt gcgcattacg tcgaagttac ccgaaaactc
     7561 ggtattccct atatctttaa agcctctttc gacaaggcaa accgttcctc catccattct
     7621 tatcgcggcg taggcttgga agaaggctta aagatttttg aaaaagtcaa agcagagttc
     7681 ggcatccccg tcattaccga cgtacacgaa ccccatcagt gccaacccgt cgccgaagtg
     7741 tgcgatgtca tccagcttcc cgcctttctt gcgcggcaga ccgatttggt ggccgcaatg
     7801 gcggaaacgg gcaatgtcat caacatcaaa aaacctcagt tcctcagccc ctctcaaatg
     7861 aaaaacattg tggaaaaatt ccacgaagcc ggcaacggga aactgatttt atgcgaacgc
     7921 ggcagcagct tcggctacga caacctcgtt gtcgatatgc tcggtttcgg cgtgatgaaa
     7981 cagacttgcg gcaacctgcc ggttattttc gacgttaccc attccctgca aacccgcgat
     8041 gctggttctg ccgcatccgg cggtcgtcgc gcacaagctt tggatttggc acttgcaggc
     8101 atggcaaccc gccttgccgg cctgttcctc gaatcgcacc ccgatccgaa actggcaaaa
     8161 tgcgacggcc ccagcgcgct gccgctgcac cttttagaag attttttaat ccgcatcaaa
     8221 gcattggacg atttaatcaa atcacaaccg attttaacaa tcgagtaaca cggtttcgcc
     8281 ttatgatgca gactttccga aaaatcagcc tgtatgccgc aaccttatgg ctcggtatgc
     8341 agattatggc gggttatatc gtcgcgccgg tgctgttcaa aatgctgccc aaaatgcagg
     8401 cgggcgaaat tgccggcgta ttgttcgaca tcctctcttg gagcgggctt gccgtttggg
     8461 gcgcggtact ggctgccgcc tttgccgccc taacccggcg gcaaaccgcc ctgctgcttt
     8521 ttttattgtc cgcccttgcc gccaaccgat tcttgattac acccgttatc gaggcgctga
     8581 aatacgggca tgagaattgg ctgttgtcgg ctttgggcgg atctttcgga atgtggcacg
     8641 gcatttccag tattgttttt atggcggccg ccctactttc gatttactta agttggcggc
     8701 tctacggcaa aaatgccgtc tgaagcctac cgttttacct cacgtcactt taatttggag
     8761 aatatttatg agcgcaatcg ttgatatttt tgcccgcgaa attttggact cacgcggcaa
     8821 cccaaccgta gaatgcgacg tactgttgga atccggcgtc atgggacgcg cagccgtacc
     8881 aagcggcgca tcaaccggtc agaaagaagc tttagaactt cgcgacggcg acaaatcccg
     8941 ttacttgggc aaaggcgtat tgaaagccgt tgaccacgtc aacaaccaaa tcgcgcaagc
     9001 cctcatcggt atcgatgcca gcgaacaatc ttatatcgac caaatcatga tcgaattgga
     9061 cggtactgaa aacaaaggta acttgggtgc caacgcgact ttggccgttt ctatggccgt
     9121 agcacgcgca gccgctgaag atgcagggct gccgctttac cgctacttgg gcggcgcagg
     9181 tccgatgtcc ctgcccgtac cgatgatgaa cgtcatcaac ggcggcgaac acgccaacaa
     9241 cagcctgaac atccaagagt ttatgattat gcccgtcggc gcaaaatctt tccgcgaagc
     9301 gttgcgctgc ggtgcggaaa ttttccacgc cttgaaaaaa ctgtgcgaca gcaaaggctt
     9361 cccgaccaca gtcggcgacg aaggcggttt cgcccccaac ctgaacagcc acaaagaagc
     9421 cctgcaactg atggttgaag ccaccgaagc cgccggctac aaagcgggcg aagacgtatt
     9481 attcgcattg gactgcgcgt ccagcgagtt ctacaaagac ggcaaatacc acttggaagc
     9541 cgaaggccgc tcctacacca acgcggaatt tgccgaatat ctggaaggcc tggtcaacga
     9601 gttccccatc atctccatcg aagacgggat ggatgaaaac gactgggaag gctggaaact
     9661 gctgaccgaa aaactgggcg gcaaagtcca actcgttggc gacgacctct tcgttaccaa
     9721 cccgaaaatc cttgccgaag gcattgaaaa aggcgtggca aacgcactat tggtcaaagt
     9781 caaccaaatc ggtactttga gtgaaaccct gaaagccgtc gacttagcca aacgcaaccg
     9841 ctacgccagc gtaatgagcc accgctccgg cgaaaccgaa gacagcacca ttgccgactt
     9901 ggcagtcgcc accaactgta tgcagatcaa aaccggttct ttgagccgtt ccgaccgcat
     9961 ggcgaaatac aaccaactgc tgcgtatcga ggaagaattg gcggaagccg ccgactaccc
    10021 cagcaaagcc gcattctacc aactgggcaa ataaaaaagg ttaaggtatg aagtgggtaa
    10081 ctgtcgtttt atccttcgca cttgtctgtt gccaatacag cctctggttc ggcaaaggca
    10141 gcatcggacg caacagcagt ctgagagaac agattgccgt tcaagaagaa aaaaaccaga
    10201 cactcgccct acgcaatcat tcccttgccg ccgaagtcta tgatttggaa aacggtcaag
    10261 aagccatttc ggaaatcgcc cgggtagaac tgggttatat ccaagacggt gaaacctttt
    10321 accgactcat caggcataac cggtaatacc gtcaaaaagc cgtccgaacc aatgttcgga
    10381 cggcttttat ttcaacaaac tgtcagacag cccctcatcc tcccccgaca aaccgcaatc
    10441 cagcctgaca tccccctcga cgcaacagca gcacggcagt atctcgtccc gccccaaaaa
    10501 agccaaaggc ggctcccgat aagtaacgct tccctccaaa atcttcactc ggcacgatcc
    10561 gcaatatccg cttcggcact gatattccac catatgcccc gtccgttcca agccttccaa
    10621 cagggtctcg ccctccaaga gctcaaaaaa acccttattc gtaccaatgc gcgccatttc
    10681 cgaccaatca aaaatatagt ggattaaatt taaaccagta cggcgttgcc tcgccttgcc
    10741 gtactatttg tactgtctgc ggcttcgtcg ccttgtccgg atttttgtta atccactata
    10801 atccactata aaaggaacaa taaccgatcc tacccgctgt ttttcccatc atacaacata
    10861 caaatgccgt ctgaaacatc cggcttcaga cggcattttt tcaaaaaaca tttacaactc
    10921 aaaatcgccc aaatcatccg tattcacttc agaatcgatc tgaccgatca aataagagga
    10981 tatttccact tcctgcggcg cgacctgtac gttgtcggac gacagccacg cattaatcca
    11041 cggaatcggg ttttgatttg cgccttcaaa tccggccggc aaccccaccg cctgcatacg
    11101 cagattggta atatattcga cgtattggga taagatttct ttgttcaaac caatcatcga
    11161 accgtcttta aacaaatatg ccgcccattc tttttcctgt tccgccgctt ttttgaagag
    11221 ttggaaacat tcgtcctgca actcggcagc aatttctgcc atttcagaat catcaacacc
    11281 cgaacgcatc agattaagca tatgctgcgt gccggtcagg tgcagggctt cgtcgcgggc
    11341 aatcagtttg atgattttgg cgttgccttc catcaactcg cgctcggcaa aagcaaacga
    11401 gcaggcgaat gaaacgtaga aacggatggc ttccaacacg ttgacgcaca tcaggcagag
    11461 atagagtttt ttcttcaacc cgcgcaaaga cacagtaatg ggttttccgc cgacattatg
    11521 caccccttcg cccaacaggt tgtaatactg ggtgtattcg attaagtcat cgtaatagca
    11581 ggcaatgtct tcggcgcggg cggtaatgta ttcgttttcg acaatatcat caaacacgac
    11641 cgacggatca ttcacaatat tgcggatgat gtgggtatag ctgcgcgagt gtatggtttc
    11701 gctgaagctc cacgtttcaa tccacgtttc caactcggga atcgaaacca aaggcagcaa
    11761 ggcaacattc ggactgcgcc cttggatgga atcgagcagt gtttgatatt tcagattgct
    11821 gatgaaaata tgtttttcgt gttcaggcag gttggcgtag tcgatacggt cgcgcgacac
    11881 gtcgatttct tccggccgcc aaaaaaacga caattgtttt tcaatcagtt tttcaaatac
    11941 ctcgtatttc tgctggtcat aacgggcgac attaaccggc tgaccgaaaa acatcggctc
    12001 attcagcgcg tcgtttttgg ttttgggaaa ggtgctgtat gacatagtta agtgttcgca
    12061 ggacataatc tattctctat attaattaaa aatgatctgt aagttttaac taacctgctg
    12121 agactttata tatttaataa aattttctaa agttaaaaca tgggttttcc caaaagttcc
    12181 aaatgttttt acggattctt tagggacaac taaggttaaa ttctcatcac tcatttcctg
    12241 aatttgagta tcagatatac cttcttgtag agtaaataaa tgcttatgag gaattcgatc
    12301 tgcttcattt aaaacttggc gccagcgatc cttacaagta gtctttgaac ctagcattgt
    12361 cagcttttca gtttgaaata tgaaattccc tgattcatcc atcgcatggt actcttcact
    12421 tccaggaaat aaaaaatctg gtttcttttt cccttctgtc ttcgcttgcg tctcaaattt
    12481 taaggaaaat tcgtcaaata ttcttgataa atgtaactct aaagattttc ctgctcttgc
    12541 ttttctgcga tttgtaaaag aatgtgcaaa attaatgaag ctatccaaat cagtaatttt
    12601 tgatttaata atttcaaatt cacgtttttc aaaaatggaa aataattcat attcctttga
    12661 aacccattgt tttaacacat tactaacgtt agttttattt aatgcaatat tttcccttgc
    12721 caaaactgcc atttcttcag ttttggggaa gttaggaaat agtgaaaata attttgttag
    12781 gttatcctct acttcttgtt ttttaggtaa atataaactt cctggtaaaa tgttagtttc
    12841 tgcgataaat atttcaatat cttcatctga agataaaaca aaagcatgga ataataaatc
    12901 tttataacaa gctctgcaca ataccaataa ggaaccacta tatttatcac ttaaaaattc
    12961 aaaattcttg ccaaaacccg taattctcgc ctcatttctc gtgccttggc cgtaatattt
    13021 aaaattgcta ttagtgacgc ttccatcttg ccaattaatt ttgattgaaa tagttttatt
    13081 tgttcccttt tggcaaacta catcaaagag gtcgtctgaa aaatgttttt gaatataaaa
    13141 tcctgattgg tgactaccag tagtaccaac atcattggga cgaatataac gacagtatac
    13201 tgcaattgat ttatttgctg tctgtattgc tgaagctact aagtcatcgg atttatttac
    13261 tacttgtatt gtctgagctg ccaagtcatt cattttttaa ctcatttata atttgtttag
    13321 caatagcttg aaccaacggt acagcaattg aattgccaaa ctgcttgtat gcagctgtct
    13381 tggatactgc atcaataaca aaatctttag gaaatcccat taaacgcgag cactccctag
    13441 gtgtcagctt cctaggattt tttcctttct gagggatgag tatttcggaa ccatctttgt
    13501 aatatcgtgc agatagagtt cgtgatattc catctaaatc aactaatcca aaaccaaatc
    13561 cattaccctt tgccttatgt tttttagcgt aattttgaag gtaaagccat aagttatcag
    13621 aaagagtaaa agaattatct acatcatctt ccaaaatttg ctttaatttt ggttgtgatt
    13681 ctggtgggga aggaaaattg aaatttattt ccttattaaa atattgtcta tcaaaaccta
    13741 caataaaaat acgctcccta ttttgaggaa cataatattt tgcattcata acttgataaa
    13801 atatctgata gtcaagctct tctaaagtcc ctttaattac tttaaatgta tttcctttgt
    13861 catgcgaaac aaggtttttc acattctcta aaagaaaaat tttaggtcga tgttttccaa
    13921 taatttcagc aacatcaaaa aatagagttc cctgcgcctt atctaagaag cctgtttctc
    13981 gtcctaggct ttttttcttt gaaacaccag ctatagagaa tggctgacac gggaatcctg
    14041 ctgttaatac atcaaactta cttggaatag ctgctttggt ttcctttaat gtaatatctc
    14101 cataaggaat atcattaaaa tttacttggt aggtttgacg ggctttatca tcccattcac
    14161 tagaaaatac acatcgccca ccaacattct ccattgcaat gcgaaaacca cctattcccg
    14221 caaataaatc aataaaagta aatttctcat tatttaaggt aactatatta tctaattgat
    14281 tttgtatttt atttttcata ttttatattt cagatgattt attaatctaa aggccatctg
    14341 aaaactcccc ctttcatcaa atcttacaag ccccgcccgc gcagccgtca tcctgaatat
    14401 cggtctgcgt atcgtccgcg ccgtcgcggg tgttatggta gtacagggtt ttgacgccgt
    14461 atttgtaggc ggtcagcagg tctttgagca tttgtttcat agaaactttg ccgccttcga
    14521 atttgcccgg gtcgtaggcg gtattggcgg aaatcgattg atcgacgaat ttttgcatca
    14581 cgccgacaag tttcaggtag ccttcgttgc cgggaagctg ccacagggtt tcataggcat
    14641 ttttcagggt ttcaaactcc ggcacgactt gtttcaaaat gccgtctttc gatgctttga
    14701 ccgttaccaa tccgcgcggc ggctcgatgc cgttggtggc gttggcgatt tgcgaactgg
    14761 tttcagacgg catgagcgcg gtcagggtgg agttacgcag gccgtatttg acgatgtcgg
    14821 cacgcaggct ttcccagtcg taatgcaaag gctcgccgca gacggcatcc aaatcttttt
    14881 tgtaagtgtc gatgggcagt ttgccttgcg aataaacggt ttggttaaag agcgtgcacg
    14941 caccgtattc tttggcaagg tttgccgatg ctttgagcag gtaatactgt atggcttcaa
    15001 aggtacggtg ggtcagaccg agcgcggagc cgtcgctgta gcggacaccg tttttcgcca
    15061 gataataagc atagttaatc acgccgatgc cgagcgaacg gcgacccata gtagaggtac
    15121 gcgcggcttc taccggatat ccctgataat ctaaaagtgc atcgagcgca cgcacggtca
    15181 agtcggcaag cccttccaat tcgtccaagc tgtttaatgc gcccaagtta aaggcagaca
    15241 gtgtacacag ggcgatttcg ccgttcggat cgttgatatt gtccagcggt ttggtcggca
    15301 gggcgatttc catacacaag ttggactgat gaacaggcgc gacgcacgga tcgaacgggc
    15361 tgtgcgtatt gcagtgatcg acgttttgaa tgtagatgcg cccggtcccg gcacgctcct
    15421 gcatcagcgt ggaaaacagg tcggcagccg gaatgatacg cttgcgtatg ttcgggtctt
    15481 gctcgtattt cgtatagagc cgctcaaatt cgtcttggtc ggcaaaaaac gcttcgtaca
    15541 accccggaac ctcgttgggc gaaaacagcg taatgttgcc gcccttaatc aggcgggtgt
    15601 acagcaggcg gttgatttgc acgccgtaat caagctgacg gatacggttg tcttccacac
    15661 cgcggttgtt tttcaacacc agcaggcttt cggcttcgat atgccacaag gggtagaaca
    15721 aagttgccgc tccgccgcgc acgccgcctt gcgaacagga tttgaccgcc gcctgaaaca
    15781 ttttgaaaaa cggaatgcag ccggtatgcc gcgcttcgcc gccccggatt tcgctgtcca
    15841 aaccgcggat acgtccggca ttgatgccga tgcccgcacg ctgggaaacg tatttcacaa
    15901 tcgcgctggt ggtggcgttg atggaatcca ggctgtcgtc gcattcgatc agtacgcagc
    15961 ttgagaactg gcgcgtaggc gtacgcacgc cgctcataat cggggtcggc agcgatactt
    16021 taaatgtgga aacggcatcg taaaaccgtt tgacgtaatc gaggcgtgtt tctttgggat
    16081 atttgctgaa aagacacatc gccaccagaa catataagaa ctgcggtgtt tcataaatct
    16141 ggctggtaac gcggttctgt accagatatt tgccttcgag ctgtttgaca gcggcatagg
    16201 aaaaggacat atcgcgttcg tggtcgatat aggcgttcag ttcatcaaat tcttcgcggc
    16261 tgtaatcctc aaggatatgc ctgtcgtatt ttccggcatc ggtgagcttt ttaacgtggt
    16321 cgtaaaggtg cggcggctcg tattcgccgt aggctatttt acgcagatgg aaaatcgcca
    16381 aacgcgcggc aaggtattgg tagtccggag tatcttccga aattaaatcg gcagcggcct
    16441 tgatgatggt ttcgtggatg tcgtcggtgc ggatgccgtt gtagaactgg atgtgcgatt
    16501 tcaactcgac ctgcgacacg gaaacatttt ccaatccttc cgccgcccaa gtaacgacac
    16561 ggtgaatctt atccaaatca atggcttcta atcttccgtc tcgtttggtt actttcaaat
    16621 cagtcggtgt attcatcgct tcctcttcca ctcttgatat tcaagacacg gtcttttcaa
    16681 acaaattaag acagacaata tagtggattt ttggcatttt ctccagtctt gacaacggtt
    16741 gcatttttca gtttcaggca atgcgcgata aaacccgcct gtcgtatttt tcctataata
    16801 tttgttttat ctgataattc tttaccgata aaaaacgggt aaattttttg ccttttgacc
    16861 ggctccggct acaaggcggt gaaataagga ttttccgacg aaaaaggaaa gcttccggtt
    16921 ttctgcccct gcgaattgtt aaattttgca aagtatgatt ttgccgcgcc gccgccgaca
    16981 aattccattt tcttaccgat tgaaatttat tattgagatt aatgtgttat ttgaatccgc
    17041 atatcaaacg gcaagttttg tcggctgaat gagtctgaaa ctgccgacaa tttgcccgtt
    17101 ccatccttcc atcctatact ggaaggaatg acaaactgaa aggatcgtca tatctgtcaa
    17161 aaagatgctt gccatactgt tgtctgcaat attgggactg gtatcgacaa ctgccgctgc
    17221 cggtacgtca gaacccgccc accgccatac caaacatatc cgcaaggcaa acaagcagat
    17281 gctgcacccc gaatgcagga aatatttgga acgccgtgcc gcgtggtacc gatcgcaagg
    17341 caacgtgcag gaattgcgcg aaaacaaaaa ggcgcgcaaa gcattccgct ccctgcctta
    17401 tgcggaacag aaaatccaat gccgggcggc ttatgaggct ttcgatgatt tcgacggcgg
    17461 cagtttccgc cgttaatccc atataaaa
//
LOCUS       DBBZXW010000030        16976 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.030, whole genome shotgun sequence.
ACCESSION   DBBZXW010000030 DBBZXW010000000
VERSION     DBBZXW010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16976
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.030"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            520..6003
                     /gene="iga"
                     /locus_tag="ACJJD2_000944"
     CDS             520..6003
                     /gene="iga"
                     /locus_tag="ACJJD2_000944"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HGG7579502.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWGASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLDTYKDKNRFSSFVRVGAGRQLVYEKGAYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNTHYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADKIKQRDNAGTIKG
                     NREHHWNITFGTNSKIGSTAVRLANNERDANNGQNVTFEDNGTLVLDQNINQGAGGLF
                     FKGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQ
                     GQLKVGDGTVILNQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGR
                     LDANGNDLTFEHIRNVDEGARIVNHNTDRASTITLTGKSLITAPQNLSVYEIRNDYDD
                     DDYYGYYSYRKPIPQGKDLYYKNYRYYALKSGGSVNAPMPENGQTENNDWVFMGYKQE
                     EAQKNAMNHKNNQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGK
                     ISVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVN
                     QSASFSSGRNVSNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKAL
                     NSFGATQINGNVNLSQNAALVLGKAALWGQIQGQGNSSVSLNQHSKWHLTGDSQVHNL
                     SLADSHIHLNNASDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGH
                     YQLHVQDKTGEPNQEGLNLFDASSVQDRSHLSVSLANNHVDLGALRYTIKTENGITRL
                     YNPYAENRRRVKPAPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAK
                     RQQAKAEQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEK
                     EREAAELSAKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQR
                     VGEEERRQTAQSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELVR
                     RQQEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAERKAAELS
                     ANQKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAELAKQRAAAEAA
                     KRQQEARQTAELARRQEAERQAAELSAKQKAETDREAAESAKRKAEEEEHRQAAQSQP
                     QRRKRRAAPQDYMAASQNRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDY
                     EEIPLDALEDENVSESVDTSDKQPQDNTELHEKYENDYEEIPLDALEDEDVSESVDTS
                     DKQPQDNTELHEKVETVSLQPRAAQPRAQAATQPQAQAAAQADAVSTNTNSALSDAMA
                     STQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGRDYASAQYRRFSSKRTQTQI
                     GIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYGKYYLNDAWYVAGDIGAG
                     SLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLSSADYKLGNDS
                     VKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVGGNSFAYKADN
                     QQKYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(6181..7383)
                     /gene="trpB"
                     /locus_tag="ACJJD2_000945"
     CDS             complement(6181..7383)
                     /gene="trpB"
                     /locus_tag="ACJJD2_000945"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HGG7579503.1"
                     /translation="MKNYHAPDEKGVFGEHGGLYVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGSPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(7568..8257)
                     /locus_tag="ACJJD2_000946"
     CDS             complement(7568..8257)
                     /locus_tag="ACJJD2_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG7579504.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLRERGIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAF
                     FEMAGLCEKQL"
     gene            8454..9233
                     /gene="rsmA"
                     /locus_tag="ACJJD2_000947"
     CDS             8454..9233
                     /gene="rsmA"
                     /locus_tag="ACJJD2_000947"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HGG7579505.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVDINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            9406..10134
                     /locus_tag="ACJJD2_000948"
     CDS             9406..10134
                     /locus_tag="ACJJD2_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG7579506.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVLFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            10207..10566
                     /locus_tag="ACJJD2_000949"
     CDS             10207..10566
                     /locus_tag="ACJJD2_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579507.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            10571..11011
                     /locus_tag="ACJJD2_000950"
     CDS             10571..11011
                     /locus_tag="ACJJD2_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HGG7579508.1"
                     /translation="MRAFQTALRPSRILNILTVSLHAASLAVCLTWFYGWMMWFGLAA
                     LVASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGTTVSQCIIPDMTDKESYRRLKVWILWRQPKKTAETDTPS"
     gene            11043..12317
                     /gene="folC"
                     /locus_tag="ACJJD2_000951"
     CDS             11043..12317
                     /gene="folC"
                     /locus_tag="ACJJD2_000951"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HGG7579509.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARSEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPKSLLSHAEAIGAKLLMVQRDF
                     EFHALENIQWNYHFRPQHSDSPARNRNSLPFPALRGAYQLSNAACALTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDMPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            12330..13328
                     /gene="ftsN"
                     /locus_tag="ACJJD2_000952"
     CDS             12330..13328
                     /gene="ftsN"
                     /locus_tag="ACJJD2_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HGG7579510.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINERLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAFEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            13321..13818
                     /locus_tag="ACJJD2_000953"
     CDS             13321..13818
                     /locus_tag="ACJJD2_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HGG7579511.1"
                     /translation="MNSLPIADLLVSAVIAACIVISTMRGVITEAGSMAAWVVSFFFA
                     KLFAAPFADIAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            13854..13985
                     /locus_tag="ACJJD2_000954"
     CDS             13854..13985
                     /locus_tag="ACJJD2_000954"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579512.1"
                     /translation="MPSEMFFPFLSHITDYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            14130..15674
                     /gene="purF"
                     /locus_tag="ACJJD2_000955"
     CDS             14130..15674
                     /gene="purF"
                     /locus_tag="ACJJD2_000955"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HGG7579513.1"
                     /translation="MCGVLGLVSHEPVNQFLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            15774..16265
                     /gene="greB"
                     /locus_tag="ACJJD2_000956"
     CDS             15774..16265
                     /gene="greB"
                     /locus_tag="ACJJD2_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HGG7579514.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            16324..16950
                     /locus_tag="ACJJD2_000957"
     CDS             16324..16950
                     /locus_tag="ACJJD2_000957"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HGG7579515.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFHRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATTNRLSR"
BASE COUNT         4771 a         4585 c         4141 g         3479 t
ORIGIN      
        1 ccacttttcg tcattcccac gaaagtggga atccagaatc tcggactttc agataatctt
       61 tgaatattgc tgttgttcta aggtctggat tcccgcctgc gcgggaatga cgaatccatc
      121 cgtacggaaa cctgcaccgc gtcattccca cgaacccaca tcccgttatt accacgaaag
      181 cgggaatcta ggacgcaggg ttaagaaaac ctacatcccg tcattccctc aaaaacagaa
      241 aaccaaaatc agaaacctaa aatcccgtca ttcccgcaca agcgggaatc caaaaacaaa
      301 aagccgcaga aatttaacgg aagaaccgaa ccccgaaaat cggcttccca ccttcgcctg
      361 aataacagaa caaaggaagc ggaaataaaa acatcgggat tcttttttta aattggcaat
      421 aaaacaccaa aatgaatgat ttacacaaca aaaaatagtc aacaccacca aaccggcgta
      481 aaatacaaaa cattatcacc cttaaaacgg taaaacctta tgaaaaccaa acgttttaaa
      541 attaacgcca tatccttatc catctttctt gcctatgccc ttacgccata ctcagaagcg
      601 gcattggtca gagacgatgt cgattatcaa atattccgtg actttgcaga aaacaaaggc
      661 aaattttttg tcggcgcaac cgatttatca gtgaaaaaca aacaaggtca aaacatcggc
      721 aacgcattat ccaacgtacc gatgattgat tttagcgttg cagatgtcaa caaacgcata
      781 gcaacggtag tcgatcccca atatgctgtc agcgtcaaac acgccaaagc agaagtccat
      841 actttttatt acggtcaata caacggtcat aatgatgtag ccgacaaaga aaatgaatac
      901 cgcgttgtcg aacaaaataa ctatgaaccc cataaagctt ggggtgcgag caacttaggt
      961 cgcctcgaag attataatat ggcgcgtttt aacaagtttg taactgaagt tgcgccgatt
     1021 gcaccaactg atgccggcgg cggattggat acctacaaag ataaaaaccg tttttcctct
     1081 tttgtcagag ttggcgcagg caggcaatta gtttatgaaa aaggggctta tcatcaagaa
     1141 ggaaatgaaa aaggctacga tttgcgcgat ctttcacaag cctatcgtta tgccattgca
     1201 ggtacacctt ataaagatat taatattgac caaacaatga ataccgaagg tttgattggc
     1261 tttggtaatc acaatacaca ctattcagca gaagaactta aacaagcact ctcgcaagat
     1321 gcgttaacaa attacggcgt gttgggcgat agcggctctc cgttatttgc ttttgacaaa
     1381 caaaaaaatc aatgggtctt tttgggaact tatgattatt gggcaggtta cggaaaaaaa
     1441 tcttggcaag aatggaatat ctataaaaaa gaatttgcag ataaaatcaa acaacgcgat
     1501 aacgccggca ccatcaaagg taatagagaa catcattgga acattacttt tggcacaaac
     1561 agcaagattg gttctacagc ggtaaggctt gccaacaatg aaagggatgc aaacaacgga
     1621 cagaatgtta cctttgaaga caacggcact ttggtattgg atcaaaacat caaccaaggc
     1681 gcgggcggtc tgtttttcaa aggcgattac acagtcaaag gtgcaaataa tgacatcact
     1741 tggctaggtg cggggattga tgttgccgac ggcaaaaaag tcgtttggca agtcaaaaat
     1801 ccgaatggcg acagattggc aaaaatcggc aaaggcacat tagaaataaa cggcacaggc
     1861 gttaaccaag ggcaattaaa agtcggcgac ggtacggtta ttctgaatca acaagccgat
     1921 gccgacaaaa aagtccaggc tttctcccaa gtcggcattg tcagcggacg cggtacattg
     1981 gtattaaata gttcaaatca gattaatccc gataacttat atttcggttt ccgtggcggt
     2041 cgtttggatg ccaatggcaa tgacttgact tttgaacaca tccgcaacgt ggatgaaggc
     2101 gcgcgcattg tcaaccacaa cacagaccgc gcctccacaa tcacattaac cggcaaatca
     2161 ttaattaccg ctcctcaaaa tctttctgtt tatgaaatcc gaaatgatta cgatgatgac
     2221 gattattatg gctattacag ctatagaaaa cccattccgc aaggcaaaga tctttattac
     2281 aaaaactatc gttattacgc cctaaaatcc ggcggcagcg tgaacgcacc gatgcccgaa
     2341 aacggacaaa cggaaaataa cgactgggtc tttatgggat ataagcaaga agaagcccag
     2401 aaaaacgcga tgaaccacaa aaacaatcag cgtattagcg gttttagcgg tttctttggc
     2461 gaagaaaacg gaaaaggaca taacggcgca ttaaacctta atttcaacgg caaaagcgcg
     2521 caaaaccgtt tcttgttaac aggcggcacg aatttaaacg gaaaaataag cgtaactcaa
     2581 ggcaatgtct tgttatcagg tcgtccaaca ccacacgcaa gagattttgt gaacaaatct
     2641 tcagcccgaa aagacgcaca tttctccaaa aacaatgaag tcgtatttga agacgactgg
     2701 ataaaccgca cattcaaagc cacagaaatt gcggttaatc aatccgcatc attctcttcc
     2761 ggcagaaatg tatccaacat taccgccaac atcaccgcaa cagacaacgc caaagtaaat
     2821 ttgggttaca aaaacggcga tgaagtttgc gtgcgctcgg actataccgg ttacgttacc
     2881 tgcaacacag acaacttatc cgataaggct ttaaacagct ttggagcgac acagattaac
     2941 ggcaatgtga atttgagtca gaatgcggca ttggtcttag gcaaggctgc attatggggg
     3001 caaattcaag ggcaaggaaa cagcagcgtc agcctaaacc aacatagcaa atggcatttg
     3061 accggcgaca gccaagtaca caatctgtca ttggcggata gccatattca tttgaacaac
     3121 gcttccgacg cgcaaagtgc aaataaatac cacacgctca aaatcaatca tttatccggt
     3181 aacgggcatt ttcattatct gacgcacctg gcgaaaaatc ttggggataa ggtgcttgtg
     3241 aaggaatccg catccggtca ttatcagctc catgttcaag ataaaacagg cgaacccaat
     3301 caggaagggc tgaatctctt tgatgcatca tccgtacaag accgttcgca cctttctgtt
     3361 tccttggcga ataaccatgt agatttaggc gcattgcgtt atacaatcaa aacagaaaac
     3421 ggtattaccc gattgtacaa tccttatgcc gagaaccgcc gccgagtcaa accggccccg
     3481 tctcctgcca caaacacggc ttctcaagca caaaaggcaa cacaaacgga cggtgcacaa
     3541 attgccaagc ctcaaaatat cgtcgtcgca ccacctagcc cgcaggcaaa tcaagccgaa
     3601 gaagcaaaac gccaacaagc aaaagcggag caagtgaagc gtcagcaagc agaagcagag
     3661 cgtaaatcgg cagagttagc aaaacaaaaa gcagaagccg aacgcgaagc aagagagctg
     3721 gcgacccgcc aaaaagcaga acaagaacgc agcagcgccg aacttgcacg tcgacatgaa
     3781 aaagaacgcg aagcggcaga gttgtcggca aaacaaaaag tcgaagccga acgtgaggct
     3841 caagcattgg cggtacgccg aaaagccgaa gccgaagagg caaaacgcca agctgcagag
     3901 cttgcacgcc ggcatgaaaa agaacgcgaa gcggcagagt tgtcggcaaa acaaagggtc
     3961 ggggaagagg aacgccgtca aacagcccaa tcccagccgc aacgccgcaa acgccgtgcc
     4021 gcaccgcagg attatatggc agcttcccaa gaccgtccta aacgccgcgg acaccgttcg
     4081 gtacagcaaa acaatgtgga aattgcccaa gcccaagcag aacttgtgcg ccgacagcag
     4141 gaagaacgca aagcggcaga gttgttggca aaacaaaggg cagaagccga acgtgaggct
     4201 caagcattgg ctgcgcgccg aaaagcagaa gccgaagagg caaaacgcca agctgccgaa
     4261 cttgcacatc gccaggaagc agaacgcaaa gcggcagaat tgtcggcaaa ccaaaaagcc
     4321 gcagctgaag cccaagcatt ggcggcacgc caacaaaaag cccttgcgcg tcaacaggaa
     4381 gaagcacgaa aagctgcaga gttagccgtc aaacaaaaag cggaaaccga acgcaaaacc
     4441 gccgaacttg ccaagcaaag ggcagcagcc gaagcagcaa aacgccagca agaagctcgc
     4501 cagaccgccg aacttgcacg tcgtcaagaa gcggaacgcc aagcagcaga gttgtcggca
     4561 aaacaaaaag ccgaaacaga tcgagaagcg gcagaatcgg cgaaacgaaa agctgaggaa
     4621 gaagagcacc gtcaagcagc ccaatcccag ccgcaacgcc gaaaacgccg tgccgcacct
     4681 caggattata tggcagcttc ccaaaatcgt ccgaaacgtc gcggacgcag atctactctg
     4741 ccggcaccgc cctcgccatc atttgattcg tcagcttacg cagcacccag ggccttgcat
     4801 aatccggact ggtatgaaaa tgactatgaa gaaatcccct tggatgcgtt ggaagatgaa
     4861 aatgtatctg aatcagttga cacatcagac aaacagcctc aagacaatac ggaacttcat
     4921 gaaaaatatg aaaatgatta tgaagaaatc cccttggatg cgttggaaga tgaagatgta
     4981 tccgaatcgg ttgacacatc agacaaacag cctcaagaca atacggaact tcatgaaaaa
     5041 gttgagacag tgagtttgca accaagagcc gcgcagccgc gagcccaagc cgccactcag
     5101 ccgcaagccc aagccgccgc gcaagccgat gcagtcagca ccaataccaa ctcggcttta
     5161 tctgacgcaa tggcaagcac gcaatctatc ttgttggata caggtgcttc attaacacgg
     5221 cacattgcac aaaaatcacg cgctgatgcc gaaaaaaaca gcgtttggat gtcgaacatc
     5281 ggttatggcc gtgattatgc ttccgcacaa tatcgccggt ttagttcgaa acgcacgcaa
     5341 acacaaatcg gcattgaccg cagcttgtcc gaaaatatgc agataggcgg cgtattgact
     5401 tactctgaca gtcagcatac ttttgatcag gcgagcggca aaaatacttt tgtgcaagcc
     5461 aacctttatg gtaagtatta tttaaatgat gcttggtatg tggccggcga tattggtgca
     5521 ggcagcttga gaagccggtt acaaacacag caaaaagcaa actttaaccg aacaagtatc
     5581 caaaccggcc ttactttggg caatacgctg aaaatcaatc aattcgagat tgtccccagt
     5641 gcgggaatcc gttacagccg cctgtcatct gcagattaca agttgggtaa cgacagtgtt
     5701 aaagtaagtt ctatgtcagt gaaaacactg acggccggac tggattttgc ttatcggttt
     5761 aaagtcggca accttaccgt aaaacccttg ttatctgcag cttactttgc caattatggc
     5821 aaaggcggcg tgaatgtggg cggtaattcc ttcgcctata aagcagataa tcaacagaaa
     5881 tattcagcag gtgccgcgtt actgtaccgt aatgttacat taaacgtaaa tggcagtatt
     5941 acaaaaggca aacaattgga aaaacaaaaa tccggacaaa ttaaaataca gattcgtttc
     6001 taaaatacta aattcatagc aaaataaaat gccgtctgaa ctcaggcttc agacggcatt
     6061 tttatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacagataga
     6121 cggcaaggcg aggcaacgcc gtactggttt ttgttaatcc actatatcag acggacgagg
     6181 ttacagttta atccctttga gcttcgcgac ggtattgatg tctttgtcgc cacgacctga
     6241 gaggttgacc agaatcactt ggtctttacc cattttcggc gcatttttca ccgcccaagc
     6301 aacggcgtgg ctggattcga gcgcggggat gatgccctcg aagcggcaga gcaagtcaaa
     6361 ggcttcgagt gcttcgtcgt ctttggcaac ggtgtattcg acgcgcttga tgtcgtgcag
     6421 atggctgtgt tccgggccga tgccggggta atccaagcct gcggaaacag agtgtgtacc
     6481 caagacttga ccgttttcgt cctgcatcag atagctgcgg aaaccgtgca atacgccaat
     6541 cggtgagccc gaagtaatcg gcgcggcgtg atcgggggtg ttcacgccca aaccgccagc
     6601 ctccacgccg acgaggcgca cgttttcttc gccgatatac gggtggaaca aaccaatggc
     6661 gttcgatccg ccgcccacgc aggcaacggc aacgtcgggc tgtctgccga tggcttccaa
     6721 catttgttct ttggcttcat tgccgatcac gcattgaaag tcgcgcacca tttcgggata
     6781 cggcgcggga ccggcggcgg taccgatgat gtagaatgtg tcatccacgc gggcgaccca
     6841 ttcgcgcatg gcttcgttca tcgcgtcttt caaagtacgg ctgccgctgt caacgccgac
     6901 gacattcgcg cccaataatt tcatacggaa cacgttgggc atttggcgtt ggatgtcgtc
     6961 cgcacccatg tacacgtcgc aagtcatgcc gaagcgggcg gcaacagtgg cactcgccac
     7021 gccgtgctga cccgcgccgg tttcggcgat gacgcgtttt ttacccatac gttttgccaa
     7081 cagtgcctga ccgatggtgt tgttgacttt gtgcgcgccg gtgtggttca agtcttcgcg
     7141 cttcaaccaa atttgcgcgc cacccaaatg ctcggacaat cgcgcggcat ggtaaacggg
     7201 gctgggcctg ccgacgtagt gtttcaaatc gcggtggaat tcttcccaaa acgacgggtc
     7261 gtttttcgct gccttatagg catccgccag ctcttgcaag gcgggaatca gggtctcgga
     7321 aacataaagc ccaccgtgtt cgccgaaaac gcccttctcg tcgggtgcgt ggtaattctt
     7381 catcagattt cgtccttgtg cttcaaattt tcagacggca atttatagtg gattaacaaa
     7441 aaccggtacg gcgttgcccc gccttgccgt actatttgta ctgtctgcgg cttcgccgcc
     7501 ttgtcctgat ttttgttaat ccactatatt tttcaaacat gccgtccgaa cgggaaattg
     7561 tcggcaatta taactgcttt tcacacaagc ccgccatttc aaaaaacgcc cgatacgccg
     7621 ccgctttttt cgccaaactc aaaggatagg cacgcgaagt cgaaggcagg cgcgtcagcg
     7681 tcaaatcccg tccggcaaac ggaaacggca cggtttcgcc cgttttcggc attttgatgc
     7741 cgccaccctg aatatcgagc aggatttccg tcgccttgcc gcctgtcgta caaatatggc
     7801 ggcactcggg tatttttgcc aacaccgccg ccaaatcgac ggtttcaact acctttaaaa
     7861 acttgtcgga cgcattgccg tgttcccttg ccgccttcaa cacggtcgga caggacgcaa
     7921 ttccccgttc gcgcaaaaac gccttgattt tctcggcatc aaacgctttt tcagacaacc
     7981 tttggaaatg cgccgcatca ttaaaaaaca ccagcccgta aacgcgccac atatcgtttt
     8041 ggaaattcgg ataatgaaac tgcatcgcgc gtttgtcttc cttgggcgga aacgtcccca
     8101 tcatcatgac cgcagccttc ggcggcaaca cggaatcgaa gggatgggtt tcgatttcaa
     8161 gcagattttc agacacgttc aatcctccaa caggcaaaac ggcagacagc cggtttttgc
     8221 accaaaccgc caaacacggc aagccttcaa acagcattat cacgccctgc cgttttcggt
     8281 tacaatgccg acatcaaacg gatactgtaa acacatttat gttccaacac acaggacgac
     8341 acttaaagca ccgccctatg tgccatcctg atttggaagg ggttacgccc ctcccaaata
     8401 gagtctgatt ctaccgccct aaagggcggg gtttcaaccg aaaaggaaac acgatgaaag
     8461 aacacaaagc ccgcaagcgt ttcgggcaga attttttgca ggacacgcgg attatcagcg
     8521 atattgtcaa cgccgtgcgc ccgcaggcgg atgatgtcgt gattgaaatc ggtccgggtt
     8581 tggcggcgat taccgaacct ttggcgaaaa agctgaaccg cctgcacgtt gtcgaaatcg
     8641 accgcgacat cgtatgccgt ctgaaaacgc tgccgtttgc ggacaagctc gtcattcatg
     8701 aaggcgacgt gttgcagttt gatttcaacg gcatcgcagg caaaaagaaa atcgtcggca
     8761 acctgccgta caacatttcc acgccgcttt tgttcaagct ggcggaggtg gcggacgatg
     8821 tcgtcgatat gcactttatg ctgcaaaaag aagtggtcga gcgtatggtt gccgcgccga
     8881 aaagcaacga ctacggccgc ttgggcgtga tgttgcaata tttcttcgat atggaaatgc
     8941 tgattgacgt gccgcccgaa tcgttcgacc ccgcgccgaa agtcgattcc gccgtcgtcc
     9001 gcatgattcc ggtgaaacac cgcatcggca gggcggacga tttcgagtat ttcgccaaac
     9061 tcgtgaaact cgccttccac caacgccgca aaaccatacg caacaatctg aaagagcttg
     9121 caggcgacga tgatttgcag gcagtcgaca tcaatccgca agaccgtgcc gaacatatcg
     9181 cgccggagaa atatgtggcg ttgagcaatt atctagcggg caaggccgtc tgaaaaggga
     9241 gtaagccgat gacgaaatac ctgcttttac ccctgatact gccgcttgca gcctgcctga
     9301 ccaatccgaa cgaccgtttt tttgacggca gacgctacac gcttcatcat atggagctcc
     9361 cgtaacgaca acctgcaacg gcaaatgccg tctgaaagaa aagacatgat caaattcaaa
     9421 aacgtacaca aacatttcaa agacctgcac gtcatcaacg gcgtgaactt ggaaatcaaa
     9481 aaaggcgaag tggtcgtcgt ctgcggacct tcgggcagcg gcaaatccac actcatccgc
     9541 accgtcaacc agcttgaaag catcgaaagc ggcgagattt gggtggacgg tgtcaacgtt
     9601 gccgacccaa aaaccgattt gaacaaaatc cgcgaagaag tcggctttgt gtttcaaagt
     9661 ttcaacctct acccgcacct gaccgtgttg gaaaacatta ccctcgcacc gatgaaggtt
     9721 aaaggtcaaa atgcggaaca ggcagagaaa aaagcgatgg aacttttgga acgcgtcgga
     9781 ctggcacaca aaaaagacgc cttcccttcc caactttccg gcggccagca gcaacgcgtg
     9841 gcgattgcac gcggtttggc gatggaaccg cgcgtaatgt tgtttgacga accgacctcc
     9901 gcactcgacc ccgaaatggt cggcgaagtg ttgaaagtga tgaaagactt ggcggaaagc
     9961 ggtatgacga tgatgtgcgt aacccacgaa atgggttttg cccgcgaagt tgccgaccga
    10021 gtgctttttg tcgataaagg gcaaatcctc gaagacgaaa cgcccgaagc gttttttacc
    10081 aacccgaaac acgaacgcgc caaacaattc ctgcaacagg tcatgaccca ctgatgctat
    10141 gccgtctgaa aaccgaacgt tcagacggca tagcccgaca ccgcaagatg attgagaaag
    10201 aaaaccatgt attttgttga ccgcaccgcc gtcgtcctca agccgaccgt ccgctttttg
    10261 gaatggctca aaagcaccga cgaaaatatg cccgacctga ccatagaaca gcttcgtgcc
    10321 aactgttccg tcttcctcgt tccgcagttc gacgaaccgg aagccgtcgt ttcctatttc
    10381 gacgaacgct accgccagat tttcgaggcg gagctggcag gttgggacat cgataaggat
    10441 aaatggccgc aagatatggg gctgaaggcg ttttgggaat ttttcgacat cgaaatccac
    10501 gatatggtgt tggacatgga agaagcggaa ttgaacatta cccccgtgtt cgacaacatg
    10561 atgtaaggct gtgcgcgcct ttcagacggc attgaggccg tcccgcatcc tgaacatcct
    10621 gactgtatcg cttcacgccg cctcccttgc cgtctgcctg acttggtttt acggctggat
    10681 gatgtggttc ggtttggcgg ctttggtggc aagttacgca tactcgctca ggataacgaa
    10741 tctgaaacac cgccatgcca taaccgccat taccatagac cgcgacggac aggcggaaat
    10801 cgtatccggc aaagacaaaa cagcggcaac acttgcgggc agcagtatgg ttacgcctta
    10861 tgccttattc ttacaatggg acacaggcgg cacaaccgtc agccaatgca tcatacccga
    10921 catgacggac aaagaatcct accggcggct gaaagtctgg atactttggc ggcagccgaa
    10981 aaaaaccgcc gaaaccgata caccaagctg atttcagacg gcatttgaac acggaacact
    11041 caatgaaaac actgcaagac tggctctcgc atttggaaac cgcccacagc ggcggcttga
    11101 tcgatatggg cttggaacgc gtaggcgaag tgaaaaaacg gatgaagctc acgccgcaat
    11161 gccccgtcgt cgttgtcgcg ggaacaaacg gcaaaggttc ggtctgcgcc tacctgacac
    11221 agatttacaa acaggcgggc tacaaaaccg gcacactgac cagcccgcat ttattgcgtt
    11281 acaacgaacg catcgccatc aacgccgaac ccgtttcgga cgatacgatt attgcctctt
    11341 tcgagcgcat cgaagcggcg cgcagcgaaa tatcgctgac ttattttgaa ttcaatacgt
    11401 tggcggccgt cgacatcttc atgcgcgaac aggttgacgt gatgatattg gaagtcggct
    11461 tgggcggacg cttggacgcg gtcaacgcgt ttgacggcga ttgcgcggtg gttaccagcg
    11521 tggatttgga ccatcaggca tttttgggcg atacggtcga gcaggtcggc tttgaaaaag
    11581 caggcgtgtt ccgtagcggc aaacccgcca tctgcggtca aaaccccgcg cccaaatcgt
    11641 tgctttcaca cgccgaagcc ataggcgcga aactgctgat ggtgcagcgc gatttcgagt
    11701 ttcacgcgct ggaaaacatc caatggaact accacttccg accgcagcat tcagacagcc
    11761 ccgctcgcaa ccgtaattcc ctgcccttcc ccgcattgcg cggcgcatac caactttcca
    11821 atgccgcctg tgcgctgacc gtgttggaat gtttgaacga caaattgccg gtggacatcg
    11881 gtgcaatcaa acgcggattg ctgctggttg aaaatcccgg acgcttccaa gtcctgcccg
    11941 gccggccgct gaccgttttg gacgtcggac acaatcccca cgctgcccgc gccctgcgcc
    12001 gcagcctgat taatttggcg tttgcgcaaa aacgcaccgc cgtgttcagt atgctgtccg
    12061 acaaagacat agacggcgtg ttggaaattg tcaaagacca gtttgacgaa tggtatatcg
    12121 cacctttgga catgccgcgc ggcatgacgc tcgagagcct gcaaaacaaa ctgcacgaac
    12181 acagcatcga aaacatacag acattcgccg ccgtccgcga agcataccgg gcggcagcct
    12241 caaaagcggg cgagaacgac agaatcgtcg ttttcggctc atttcatacc gttgccgatg
    12301 tcatgtcggt actttaaaag gaaacttcta tgtccgaaaa caaacaaaac gaagtcctga
    12361 gcggttacga acaactcaaa cggcgcaacc gccgccgcct cgtaacggca agttgcttgg
    12421 ttgccgcctc ctgcatcctg ctggcagccg ccctcagttc cggccctgcc gaacagactg
    12481 ccggcgaaac aagcggcgta gaaaacaaag cggcaggtgc ggcacaaacc cctgccttga
    12541 aatccgccgc cgacaaaccg caggacttgg caggcgaaga caagccttct gccgccgaca
    12601 gcgaaatcag cgagcctgaa aacgtaggcg cgccgctggt gctgattaac gagcgcctcg
    12661 aagacagcaa catcaaaggt ttggaagcat ccgagaaact gcaacaggca gaaaccgcca
    12721 aaaccgcacc gaagcaggca aaacaacgcg ctgccgaaaa agtgccggca actgccgaca
    12781 gtacggatac ggtagcgttt gaaaaaccga aacgcactgc cgaaacaaaa ccgcaaaaag
    12841 cggaacgcac tgccaaagcc aagcccaaag ccaaagaaac caaaaccgcc gaaaaagttg
    12901 ccgacaaacc gaaaactgcc gccgaaaaaa ccaaaccgga tacggcaaaa tccgacagcg
    12961 cggtaaaaga agcgaaaaaa gccgacaagg ctgaaagcaa aaaaacagcc gaaaaagacc
    13021 gttcggacgg caaaaaacac gaaacggcac aaaaaaccga caaagcggac aagaccaaaa
    13081 ccgccgagaa ggaaaaatcc ggtaaaaaag ccgccattca ggcaggttat gccgaaaaag
    13141 aacgcgcctt aagcctccag cgcaaaatga aggcggcggg tatcgattcg accatcaccg
    13201 aaattatgac cgacaacggc aaagtttacc gcgtcaaatc aagcaactat aaaaacgcaa
    13261 gggatgccga acgcgatttg aacaaattgc gcgtacacgg tatcgccggt caggtaacga
    13321 atgaatagcc tccccattgc cgacctcctc gtctccgccg tcatcgccgc ctgcatcgtc
    13381 atttccacga tgcgcggcgt gattacggag gcaggctcaa tggcggcatg ggtggtttcc
    13441 ttctttttcg ccaaactctt tgccgcaccc ttcgccgaca tcgcctttgc atcgttccaa
    13501 ccccgcctgt ttgcattggc tctgtcgttc atttccctat tcgtcattgc ctgtctgatc
    13561 cagaaaatac tccgctcgct gctgaccggg gcagtttcgg cggtcggttt gggctttgcc
    13621 aaccgcattt tgggcggcgt attcggtgca ttgaaaggca ttttgattat taccctgctg
    13681 gtcatgctcg cttcaaaaac cgacctgccc gataccgaag aatggcggca atcttacaca
    13741 ctgccgtttt tcgtatcgct ttccgaagcc gtgttgaacc atagcggcgg cacggcggaa
    13801 actccggaag acgattgatt gccatacgga tatttcagac ggcattctct tttatgccgt
    13861 ctgaaatgtt ttttcctttc ctcagccata tcacagatta tagtggatta aatttaaacc
    13921 agtacggcgt tgcctcgcct tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt
    13981 cctgattttt gttaatccac tataaatctt attctccata aacccaccta tctgtccttc
    14041 gctcaaatat tgtcaacaat tcaggcaaaa aaccaccgtt tactttataa ttccgtttta
    14101 cccttaaacc tcgaatcgga gaagacgata tgtgcggcgt attaggtttg gtcagtcatg
    14161 aacccgtgaa ccagtttctg tacgacggct tgcagatgtt gcagcacagg gggcaggatg
    14221 cggcgggcat tgcaacggcg gaaggcggta ccttccatat gcacaaaggc aaaggcatgg
    14281 tgcgcgaagt gttccgcaca cgcaatatgc gcgatttgac cggcaacgcc ggtatcgccc
    14341 acgtccgtta tcctactgcg ggcaacgcag gcagcagcgc ggaggcgcag cctttctacg
    14401 tcagctcgcc gttcggcatc gttttggcgc acaacggcaa cctcaccaac actgccgaac
    14461 tgtatgaaaa cgtgtgtaac aaacacctgc gccacgtcaa caccagctcc gattccgaag
    14521 tcttgctcaa cgtattcgcg cacgaattac gccgcgaagt ctctaaaaac gccgacccgc
    14581 accggctcaa tgccgacaat attttcaacg ccgttgccca agtccaccgc ctggtgcgcg
    14641 gcgcatacgg tgtgattgcc atgattgcgg gctacggtat gctcgccttc cgcgaccctt
    14701 acggcatccg cccgctggta ttgggttcgc aaaccgacag cgaaggcaga aaatcctatg
    14761 ccgtcgcctc cgaatccgtc gccttcaacg cgcttaccta cgatttggaa cgcgacatcc
    14821 ggccgggcga agcggtattt gtcggctttg acggcacaat gattgcccgc caatgcagcg
    14881 accgtgccaa actcagcccc tgcctttttg aatatgttta ttttgcccgc cccgactctg
    14941 tgattgacgg cgtatccgtt taccaatcgc gcttggatat gggcgtgtcg ctggcggaaa
    15001 aaatcaaacg cgagctgccc gtggacggca tcgatgtcgt gatgcccatt cccgacacca
    15061 gccgccccag cgcgatggag cttgccgtcc atctcgacaa accctaccgc gagggtttga
    15121 ttaaaaaccg ctatatcggc cgcaccttta ttatgcccgg acaggcgacg cgcaaaaaat
    15181 ccgtgcgcca aaaactcagc ccgatggaaa ccgaatttgc aggcaaaagc gtgttgctgg
    15241 tggacgactc catcgtgcgc gggacgacca gccgcgaaat cgtcgaaatg gtacgcgcgg
    15301 cgggcgcgcg caaagtctat atcgcctccg ccgcgcccga agtgcgctat cccaatgtgt
    15361 acggcattga tatgcccacg cgcgaagagt tgattgccaa cgggcgcagc gcggcggaaa
    15421 tcgccgccga aatcggcgcg gacggcatcg tatttcaaga cttgggcgat ttggaagccg
    15481 tcgtcaaagc actcaatccg aaaatcgaat ccttcgattc gtcctgtttc aacggcattt
    15541 atcagaccgg cgacatcgat gatgcctacc tcgaccgcct gtctgccgag aaatccggct
    15601 gcggcggtct gaaaatccac ccgagcagga tggaacacag catcagcatc agcgatgcgg
    15661 gcgacgaaga ataaggcttc ccaaaccgcg atgccgtctg aaatccgaac gccgggtttt
    15721 cagacggcat ttcccatatc ggcatcacat ttcccgtttc atccgcacac aatatgagta
    15781 ccgaaaccaa aaactacatt acgcccgccg gatggcaggc attgaaagac gagctttatc
    15841 aactggtcaa caaagaacgc cccgaaatcg tccaaatcgt caactgggcg gcaggcaacg
    15901 gcgaccgcag cgaaaacggc gactatcttt acggcaaacg ccgtatgcgc gaaatcgacc
    15961 gccgcatccg tttcctgacc aagcgtttgg agtccgccgt cgtcgtcgat cccgaattgc
    16021 gcgaagcgac cgaccaagta tttttcggcg cgaccgtcgg cctgttgcgc ggcgacgggc
    16081 gcgagcaaac cgtcaaaatc gtcggcatcg atgaaatcga taccgcgcaa aacaaaattt
    16141 cttggatttc gccgttggcg cgttgcctga ttaaagcgcg cgaaggcgac gaagtggttt
    16201 tgaacacgcc ggaagggcgt gaggaaattg aaatcctttc tgtcgaatac atcaaaatcg
    16261 actgatcggg aatgccgtct gaaacggtgc aagcgcgccg tttcccaaat aaaggaatac
    16321 cgaatgagga aaatccgcac caaaatctgc ggcatcacca caccggaaga cgcatcggcc
    16381 gccgtagcgg caggtgcaga tgccgtcggg ctggtctttt tccaaggcag cagccgggcc
    16441 gtcgatattg cccgcgccaa aaaaatcacc gccgcactgc cgccgtttgt cagcgttgtc
    16501 gcccttttcg tcaacgaaag cgcgcaaaac atccgccgca tccttgccga agtgccgata
    16561 cacatcatcc aattccacgg cgacgaagac gacacattct gccgtcagtt ccaccgcccc
    16621 tatatcaagg ccattcgtgt tcagacgaca tcagacatcc gaaacgccgc cgaccgcttc
    16681 cccgacgctc aggcactgct tttcgatgcc taccatcctt cggaatacgg cggcaccgga
    16741 caccgcttcg actggacgct gctggcggaa tattcgggca aaccgtgggt acttgccggc
    16801 gggctgaccc ctgaaaacgt cggcgaagcc gtccgcatca ccggagcgga agcggtcgat
    16861 gtatccggcg gcgtggaagc gtctaaaggc aaaaaagacc cagccaaagt cgccgccttt
    16921 atcgcaacca ccaaccgcct atcccgttaa agcaacaaaa attgccgccg gaatga
//
LOCUS       DBBZXW010000031        16853 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.031, whole genome shotgun sequence.
ACCESSION   DBBZXW010000031 DBBZXW010000000
VERSION     DBBZXW010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16853
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.031"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(71..1627)
                     /gene="dnaA"
                     /locus_tag="ACJJD2_000958"
     CDS             complement(71..1627)
                     /gene="dnaA"
                     /locus_tag="ACJJD2_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HGG7579516.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRHTAEPASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1920..2054
                     /gene="rpmH"
                     /locus_tag="ACJJD2_000959"
     CDS             1920..2054
                     /gene="rpmH"
                     /locus_tag="ACJJD2_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HGG7579517.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2057..2422
                     /gene="rnpA"
                     /locus_tag="ACJJD2_000960"
     CDS             2057..2422
                     /gene="rnpA"
                     /locus_tag="ACJJD2_000960"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HGG7579518.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2488..2709
                     /gene="yidD"
                     /locus_tag="ACJJD2_000961"
     CDS             2488..2709
                     /gene="yidD"
                     /locus_tag="ACJJD2_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HGG7579519.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            2881..4518
                     /gene="yidC"
                     /locus_tag="ACJJD2_000962"
     CDS             2881..4518
                     /gene="yidC"
                     /locus_tag="ACJJD2_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HGG7579520.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4599..5312)
                     /locus_tag="ACJJD2_000963"
     CDS             complement(4599..5312)
                     /locus_tag="ACJJD2_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HGG7579521.1"
                     /translation="MMSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLLELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHSETRLCTATDLTLPTQEIISQTVVQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(5371..5961)
                     /locus_tag="ACJJD2_000964"
     CDS             complement(5371..5961)
                     /locus_tag="ACJJD2_000964"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HGG7579522.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPKALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCALKSEDL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVDVL"
     gene            6109..6612
                     /locus_tag="ACJJD2_000965"
     CDS             6109..6612
                     /locus_tag="ACJJD2_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HGG7579523.1"
                     /translation="MSDPNLIDPEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            6646..6825
                     /gene="rpmF"
                     /locus_tag="ACJJD2_000966"
     CDS             6646..6825
                     /gene="rpmF"
                     /locus_tag="ACJJD2_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HGG7579524.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            7000..7527
                     /locus_tag="ACJJD2_000967"
     CDS             7000..7527
                     /locus_tag="ACJJD2_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HGG7579525.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            7615..8670
                     /gene="plsX"
                     /locus_tag="ACJJD2_000968"
     CDS             7615..8670
                     /gene="plsX"
                     /locus_tag="ACJJD2_000968"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HGG7579526.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            8806..9057
                     /locus_tag="ACJJD2_000969"
     CDS             8806..9057
                     /locus_tag="ACJJD2_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HGG7579527.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            9084..9500
                     /locus_tag="ACJJD2_000970"
     CDS             9084..9500
                     /locus_tag="ACJJD2_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579528.1"
                     /translation="MKTSTVVFGGFFMADNRERIQIPVLENPGIREINHFFSVSNFEK
                     KAGVLVFRIIPEPKFGNTELTIYFEEGCYLPMIQTILEDGDIEVKNLKTENYSGNTME
                     IWGDFYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            9520..9723
                     /locus_tag="ACJJD2_000971"
     CDS             9520..9723
                     /locus_tag="ACJJD2_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579529.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPIHGNLHLKTICIPNHTPI
                     PVSVICTLSVLGNHRFFAYNSRI"
     gene            9750..10712
                     /locus_tag="ACJJD2_000972"
     CDS             9750..10712
                     /locus_tag="ACJJD2_000972"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HGG7579530.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDTPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10759..11166
                     /locus_tag="ACJJD2_000973"
     CDS             10759..11166
                     /locus_tag="ACJJD2_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HGG7579531.1"
                     /translation="MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLILIYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            11260..12186
                     /gene="fabD"
                     /locus_tag="ACJJD2_000974"
     CDS             11260..12186
                     /gene="fabD"
                     /locus_tag="ACJJD2_000974"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HGG7579532.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEQAIVKATFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LNFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVRQICTESAQDEVVEAVNFN
                     SPGQVVIAGNAAAVGRAMTAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKTAACSALTDAGQVAAFIEAH"
     gene            12325..14190
                     /gene="msbA"
                     /locus_tag="ACJJD2_000975"
     CDS             12325..14190
                     /gene="msbA"
                     /locus_tag="ACJJD2_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HGG7579533.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIIAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDSIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLFALQTANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            14290..15855
                     /gene="guaA"
                     /locus_tag="ACJJD2_000976"
     CDS             14290..15855
                     /gene="guaA"
                     /locus_tag="ACJJD2_000976"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HGG7579534.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRGIQDGEPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            15917..16663
                     /gene="fabG"
                     /locus_tag="ACJJD2_000977"
     CDS             15917..16663
                     /gene="fabG"
                     /locus_tag="ACJJD2_000977"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HGG7579535.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRSGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMVREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         4266 a         5133 c         3956 g         3498 t
ORIGIN      
        1 aagttaatcc gctatatctt tacccttcgg acggcatggg caatatcatg tcgtctgaaa
       61 acgttttcca tcagttttga atcagaatca gcagcttttc ataatcctga gccaattccg
      121 gatcttcttc gcgcagtttc gccactgccc tgatgccgtg cataacggtc gtatggtcgc
      181 gtccgccgaa cgaatcgccg atagacggca ggctcaaagt ggtcagttct ttggtcaggc
      241 tcatcgccac ctggcgcgga cgggcaatgt ttcgtgtccg tttcttaccg agcacatcgc
      301 tgattttgat gcggtaatat ttcgcaacgg catcaataat aatatcggcg gtgatgactt
      361 tgtgcttctc ggcaataatg tcctgcaaag cagtacgcgc caaatcgatg tcgatgacgg
      421 gacggttcat aaagcggctg ctcgctccga cgcggttgaa cgcgccttca agctcacgca
      481 cgttggaacg gatcagattg gcaatgaaca gcgcggcttc gtcttcaata ctgatgcccg
      541 ccgcttccgc ctttttctgc aaaatggcga tacgcatttc caattcgggc ggctcgagtt
      601 ccaaagtcag tccccatgaa aaacgggatt tgaggcggtc gtccatacct tcgattttgg
      661 cgggtaaaac atcgcaagtg aggatgagct gttttttctc gttatggaaa tgattgtaca
      721 gatagaagaa ttcctccatc gtacggtctt tgcctttgat gaactggatg tcgtcgataa
      781 tcagcaggtc gtattgcttg tattgctgct tgaacacgtc gtaggtattg ttgcgaaccg
      841 ccttcataaa gctgcggata tagtcgtccg aatgcatata gcgcactttg gcatcgggac
      901 ggtttttcaa aagctcgttg ccgaccgcct gtaccaggtg ggttttgccc aaacccgtgc
      961 tgccgtacag gaaaaacggg ttgtagctct gccccgggct ttccgcaatc gcctgcgccg
     1021 cagccgccgc aaggcggttg cccttgcctt cgaccaatgt gtcgaacgta tagtccggcg
     1081 acagattggt ctgctcgtaa cgtgcctctt ccgcatcgcg ctgcgcatcc gtccgcgctt
     1141 tcgcaagcac ctccgattcc ggacgggaag caggttcggc agtatggcgc ggctcatgcg
     1201 ggaggttttt catacgttcc gccagaatat ccgccgccgt tttcgacgca gcgggtttga
     1261 caggctcttc agacggcagc tcgtccaaca gaacctcctg cacaggcatc tcctccgacc
     1321 ccgcgtgcaa ggacggctcg gcaggttcga cagcaccttc aaccgccgcc atctcataac
     1381 gcacgccttc tcctggtttg aatacgaagg cggaacggcc agcagccaac tcttccctca
     1441 ccgcttctat tttcccggca aactggctct taagcatatt gcaggcaaac tggttcttgc
     1501 cgtacaccac ccatacgcca ccctcctcac cgacggtaag gggcgcaatc cattgcgcaa
     1561 actgcccttg aggcaacata tcgtgaagac ggcggaggca cagcggccaa aactctgcta
     1621 atgtcatgga taagctcgaa tcggtaaaaa tgaaatcgaa aacaaagaaa atataatatt
     1681 ttcaaaaaga aaacaaatct gttgaacaca catcggttca aaatgcagcg aaccgaatta
     1741 taccgactcg ccgatatttt atccacaacc cgtgcaaaat ttatccacag aaaggcggca
     1801 gaaatccgca ggcaatcggg caatcctcct gcaaagtttc tatattgatt gacaaaagcg
     1861 gcaaattgga gtgtaattca cggtttaatt atctacccat tctattttta ggaaacatca
     1921 tgaaacgcac ttatcaacct tccgttacca aacgcaaacg cacccacggc ttcctggtgc
     1981 gctccaaaac acgcggcggc cgcgcagtat tggctgcacg ccgcgccaaa ggccgcaaac
     2041 gcctggcggt ataattttgg actaccgctt cggaaggcag taccgcttgt tgaaaacgga
     2101 tgatttttca tccgtttttg cattcagaaa ccgccgcagc cgcgacctgc tgcaagtttc
     2161 gcgttcaaac ggcaacgggc tggaccatcc ccgcatcggt ctggtggtcg gcaaaaaaac
     2221 cgccaaacgc gccaacgaac gaaattatat gaagcgcgtc atccgcgact ggttcagatt
     2281 gaacaaaaac cggctgccgc cgcaggattt cgtcgtgcgc gtccgccgta aattcgacag
     2341 ggctaccgca aaacaggcaa gggcggaact ggcacaactc atgttcggca accccgcaac
     2401 cggatgcagg aaacaggcat gatcagaacg gtactctgca ggcaaggttc agacggcaac
     2461 gggtttccca tactaaggaa catcccgatg aacttcctat tgtccaaact cctgctggga
     2521 ctgatacggt tctaccaata ttgcatcagc ccgctgattc cgccgcgctg ccgttatacg
     2581 ccgacctgtt cgcaatacgc ggtcgaagcg gtcaaaaaat acggcgcatt caaaggcggc
     2641 cggctcgcca tcaagcgcat tgcacgctgc caccctttcg gcggacacgg acacgacccc
     2701 gttccctgac ccgacgcaat attcaaattg cacgctttcc ttttatttcc catcggtttc
     2761 tatataatgc cgtctgaact ttcgggctgg cggcacgacc gtcgggtatg aagcccgccc
     2821 ttattccccg tctatcggaa cacgcaacct gcggcatttc cgaccattca ggaaactctt
     2881 atggatttta aaagactcac ggcgtttttc gccatcgcac tggtgattat gatcggatgg
     2941 gaaaagatgt tccccactcc gaagcccgtc cccgcgcccc aacagacggc acaacaacag
     3001 gccgtaaccg cttccgccga agccgcgctc gcgcccgcaa cgccgattac cgtaacgacc
     3061 gacacggttc aagccgtcat tgatgaaaaa agcggcgacc tgcgccggct gaccctgctc
     3121 aaatacaaag caaccggcga cgaaaataaa ccgttcatcc tgtttggcga cggcaaagaa
     3181 tacacctacg tcgcccaatc cgaacttttg gacgcgcagg gcaacaacat tctaaaaggc
     3241 atcggcttta gcgcaccgaa aaaacagtac agcttggaag gcgacaaagt tgaagtccgc
     3301 ctgagcgcac ctgaaacacg cggtctgaaa atcgacaaag tttatacttt caccaaaggc
     3361 agctatctgg tcaacgtccg cttcgacatc gccaacggca gcggtcaaac cgccaacctg
     3421 agcgcggact accgcatcgt ccgcgaccac agcgaacccg agggtcaagg ctactttacc
     3481 cactcttacg tcggccctgt tgtttatacc cctgaaggca acttccaaaa agtcagcttc
     3541 tccgacttgg acgacgatgc caaatccggc aaatccgagg ccgaatacat ccgcaaaacc
     3601 ccgaccggct ggctcggcat gattgaacac cacttcatgt ccacctggat cctccaaccc
     3661 aaaggcggac aaagcgtttg cgccgctggc gactgccgta tcgacatcaa acgccgcaac
     3721 gacaagctgt acagcaccag cgtcagcgtg cctttagccg ctatccaaaa cggtgcgaaa
     3781 tccgaagcct ccatcaacct ctacgccggc ccacagacca catccgttat cgcaaacatc
     3841 gccgacaacc tgcaactggc caaagactac ggcaaagtac actggttcgc ctcccccctc
     3901 ttttggcttt tgaaccaact gcacaacatc atcggcaact ggggctgggc gattatcgtt
     3961 ttaaccatca tcgtcaaagc cgtactgtat ccattgacca acgcctctta ccgttcgatg
     4021 gcgaaaatgc gtgccgccgc gcccaaactg caagccatca aagagaaata cggcgacgac
     4081 cgtatggcgc agcaacaagc catgatgcag ctttacacag acgagaaaat caacccgctg
     4141 ggcggctgcc tgcctatgct gttgcaaatc cccgtcttca tcggattgta ttgggcattg
     4201 ttcgcctccg tagaattgcg ccaggcacct tggctgggtt ggattaccga cctcagccgc
     4261 gccgacccct actacatcct gcccatcatt atggcggcaa cgatgttcgc ccaaacctat
     4321 ctgaacccgc cgccgaccga cccgatgcag gcgaaaatga tgaaaatcat gcctttggtt
     4381 ttctccgtca tgttcttctt cttccctgcc ggtctggtat tgtactgggt ggtcaacaac
     4441 ctcctgacca tcgcccagca atggcacatc aaccgcagca tcgaaaaaca acgcgcccaa
     4501 ggcgaagtcg tttcctaaat gccgcagcat gaaaaatgcc gtctgaaacc tgttcagacg
     4561 gcatttttat tgttcacccc ctatcggggc ggaaatcttc aacctgcata catcacaaaa
     4621 atcgtcgggc gttttttcag attgggcatt tcttttcttt ttcgccactg cacaaccgtc
     4681 tggctgatga tttcctgagt cggcaacgtc aaatccgtag ccgtacacaa acgcgtttca
     4741 gaatgcaggt tttccaccgc atccgccaac aacacatcgt tgcgatacgg cgtttcgata
     4801 aacagctgcg tttcattctg ctggcgcgaa cgttgctcca aagccttcaa actctgaatc
     4861 cgctcgtttt tttcagacgg cagataaccc ttaaacgcaa aactctgccc gttcgcaccc
     4921 gaagccatca aagccagcag caggctggaa ggcccgacca gcggacgcac ttcaaaaccg
     4981 tgtttatgcg ccaaagccac cagattcgca cccggatcgg caacagccgg gcaacccgcc
     5041 tcgctgacaa tgcccatact gcgcccttct tgcaaaggtt tcagcaattc cagcaaagtc
     5101 ttcaaatccg tgtgttcgtt cagcgtttgc aaattcagtt cgcggatagg cattgtcacg
     5161 cccaaatgtt tcaaatgcgc gcgcgccgtt ttttccgctt ccacgacaaa atccgtcagc
     5221 ccgacaatcg cctgttgttc atgcggcaac aggcacggcg tatcgggcgt acccaaaggc
     5281 gtaggaatca aatacaaaac aggagacatc attccctcac tcatcggtta aaaatgccgt
     5341 ctgaaccctt cagacggcat aaacgggcag ttacaaaaca tccacgccct catttttcaa
     5401 aaaatcgacc agacggaaaa ccggcaaacc gattaaagca ttcggatcgg tactctcaat
     5461 cctttcaatc aacaatgcac ccaaatcctc actcttcagc gcacacgaac aataaaccgc
     5521 atcaggctcg cgctccaaat agcggaggat gtgcaactcg tccaactgcc tcatcacgac
     5581 caccgtctta tcgatatgcc gctgcatcct gcccgtaacc gtatttagca gaacgaccgc
     5641 gctgtaaaac tcaatctccc tgccgctcaa atgcatcaac atcttttgcg cattagcaag
     5701 gttcatcggc ttgccccact gcctgccgtc gcaccacgcc acctggtccg caccgacaat
     5761 caacgccttt gggaaacgcc cggtcaacga ccgcgcctta ccctcggcaa ggcgcaatgc
     5821 cgtctgaggg gcggattccc ccaacatcgg cgtttcgtca aaatcggggg acgccgcctg
     5881 aaaggcaatg ccgagccttt ccatctgttc gcggcggaaa accgaactcg tacccaaaat
     5941 caaaggcagt tccaaaccca tcccatcctc cttaccgttg aaaacacgcc cgaaggggcg
     6001 gtaaaatcca gccatgcgcc gaaacacgga tacccgcctt cggcgtaccg caacattttt
     6061 cttaaaaata ttgacgttag aacatctaaa ttatatcata ccccgtttat gtcagaccct
     6121 aatttgattg acccggaaat tttcgccgcc gaagggcaga atctgcaagg cagttttctg
     6181 ctggaagaat tggatgaacg cgtcagttcg cacgattatc ccgccgacag gcagaccaaa
     6241 atatcgttta cactgaccgg cggtcgcgac cggctgcaac gcctgttcct cgacctgaac
     6301 gtcaaagccg atatgcccct gatttgccag agatgtatca aacccatgcc gttcatgctt
     6361 gatgaaagca gccgtatcgt cctgttttcc aacgaagagt ccttggacga atccatgctt
     6421 gccgacgaag aactcgaagg catactgatt gaaaaagaac tcgacgtgcg cacattggta
     6481 gaagaccaaa tcctgatgtc cctgcccttt tcgccgcgac acgaagactg cggcgacaat
     6541 gggacactgg aagaagtcaa tcgggacaaa cccaacccct ttgctgtttt ggcaggtttg
     6601 aaaagcaatt gattaggaca cagtttattt atctaggagc ttgaaatggc cgttcaacaa
     6661 aacaaaaaat ccccttccaa acgcggtatg caccgttcgc acgacgcgct gaccgcgcct
     6721 gcactgtctg tcgacagcac aaccggcgaa gtacaccgcc cgcaccacat ctcccccaac
     6781 ggtatgtacc gcggccgcaa agtggtcaaa gccaaaggcg aataatccct attcgactga
     6841 ctgaaaaagc cagaacattg ccatgcaatt actggctttt tttgcattgg acgcaccatc
     6901 cgtccaaact ttcgccatac gtcaacacac aggggcaaag cgttccgtat aataccccgt
     6961 gaaaatattc caaaagcccc aaccaccaag gaaattccga tgaaacagaa aatctggtac
     7021 acctacgatg acatccaccg cgtcatcaaa gcattggcag aaaaaatccg gaacgccgac
     7081 atcaaatacg atgccatgat tgccatcggc ggcggcggct ttattccggc acgtatgctg
     7141 cgctgttttc tggaaattcc gatttatgcc gtaaccaccg cctattacga cagcgacaac
     7201 gaaggacagg ttacagaaga agtcaaaaaa gtccaatggc tcgaccccgt tcccgaagcc
     7261 ctgcggggca aaaacgtcct tgttgtcgat gaagtggacg acagccgcgt aaccatggaa
     7321 ttttgcctga cagagctgct caaagaagac ttcggtacga tcggcgtcgc cgtactgcac
     7381 gaaaaaatca aagccaaagc aggcaaaatc cccgaaggca ttccctattt cagcggcatc
     7441 accgtagaag actggtggat caactatccg tgggacgcac tcgacatcga cgaacacaac
     7501 cgccttgccg aggccggccg aggctgaccc tttcagacgg catattttcc gaaccgatgc
     7561 cgtctgaagc ccgcacgacc cctgccgcag accgaaaacc taccggagaa ccctatgatt
     7621 acacttgccg tagatgccat gggcggcgac caaggacttg ccgttaccgt acccggcgca
     7681 accgcattcc tccaagcaca ccccgatgtc cgcctgatta tgaccggcga cgaaacgcaa
     7741 ctgcgccaag ccctgaccgc ggcaggcgca ccgatggaac gcatcgacat ctgccatacc
     7801 acccaagttg tcggcatgga tgaatcccct cagtccgccc taaagaacaa aaaagactcc
     7861 tccatgcgcg ttgccatcaa ccaagttaaa gaaggcaaag cccaagccgc cgtatccgca
     7921 ggcaacacgg gcgcactcat ggcaaccgca cgtttcgtcc tcaagaccat acccggtatc
     7981 gaacgccccg ccatcgccaa attcctcccg tccgacaccg accatgttac cctcgccctc
     8041 gaccttggcg cgaacgtcga ctgcacgccc gaacagctcg cccaatttgc cgttatcggc
     8101 agcgaactcg tccacgcact ccatcctcaa aaaggacagc cgcgcgtcgg gctggtcaac
     8161 gtcggcacgg aagacatcaa aggtacggac accgtcaaac aaacctacaa actgctgcaa
     8221 aacagcaaac tcaactttat cggcaacatc gaaagcaacg gcatcctgta cggcgaagca
     8281 gatgtcgtcg tcgccgacgg ctttgtcggc aacgtcatgc tcaaaaccat cgaaggcgcg
     8341 gtcaaattca tgagcggagc catccgccgc gaattccaaa gcaacctgtt caacaaactt
     8401 gccgccgttg ccgccctacc cgccctcaaa gggctgaaaa acaaactcga tccgcgcaaa
     8461 ttcaacgggg ccatcctgct cgggctgcgc ggcatcgtca tcaaaagcca cggcggcaca
     8521 gacgaaaccg gtttccgcta cgcactcgaa gaagcctacc acgaagccaa gtccgccggc
     8581 ctttccaaaa tcgaacaagg cgttgccgaa caactcgccg cactcgaaac tgccaaagcc
     8641 gtccaaaacg aaaatgtcgg cggtctgtaa cacacacgat gccgtctgaa cgcccccgcc
     8701 cctttcagac ggcatccgcc cgccccgaac ctgcgggcgc ggacggcgat gcacctgtcc
     8761 ggcacttccc aaatacttcc ctgtaaaata aggaatattt gaaaaatgaa gacattagaa
     8821 aaacggatga aagctctaga caaacggatg atgaagttcg gaaaatccct tgaaggcagg
     8881 cttgatgccc gtctgattga atccgcattg gattatattc attattcgga acgttttttg
     8941 gcttttgaaa tcctgtgtac ttatatcgaa gatttcgatg tccggctgac ggaacaagaa
     9001 tcccgggaaa tttcttttat caacaaggaa tttgagatag aaagcacgtc cgattaacca
     9061 ataaagccaa tgatttgata agaatgaaaa catcgacggt cgtttttggc ggatttttta
     9121 tggcagacaa cagggagcga atccaaatcc ccgttttgga aaatcctggc attagggaaa
     9181 tcaatcactt tttttccgta tcaaattttg agaaaaaagc cggcgtcctt gttttcagaa
     9241 ttattcctga acccaaattt ggcaataccg aattaactat ctattttgaa gaaggatgtt
     9301 atttgccaat gattcaaaca attttagaag atggggatat tgaagtcaaa aaccttaaaa
     9361 cagaaaatta tagtggaaat acaatggaaa tttggggaga cttctaccct attgagcata
     9421 tctctaaaaa tatttctaca attcaaaata taatttctga atttatgata caaaaacaaa
     9481 caccggcacc aataatttga tggaaaacca acaatcaaaa tgccgtctga agcatgtttg
     9541 gttttcagac ggcatttcct tcgcttaaaa cagcgtatcg gcaaccccgc cctgcctatc
     9601 cacggcaatc tgcatctgaa aaccatctgt atcccaaacc acacccccat ccctgtttcc
     9661 gtcatttgca ccctgtccgt attgggcaat catcggtttt tcgcttacaa tagccgaatc
     9721 tgaaccaact ctctaaaaag gccgttccca tgcagtatgc aaaaatttcc ggcacgggca
     9781 gctatcttcc tgccaaccgc gtcagcaatg acgaccttgc ccaaaaggta gatacctctg
     9841 acgagtggat taccgcgcgc acgggcatca agttccgcca tattgcagcc gaaaatgaga
     9901 aaaccagcga tcttgccgcc gaagcagccc gccgcgcgct ggatgcagcc ggattagaca
     9961 gcggcgaaat cgatttgatt atcgtggcga cggcaacgcc ggatatgcag tttccttcta
    10021 ccgccaccat cgtgcagcaa aaattgggca tcaccaacgg ctgtcccgcg tttgacgtac
    10081 aggcggtgtg cgccggcttt atgtacgcgc tgaccacggc aaacgcctac attaaaagtg
    10141 gcatggcgaa aaacgcgctg gtcatcggcg cggaaacctt cagccgcatc gtcgattgga
    10201 acgaccgcac aacctgcgta ttgttcggcg acggcgcggg cgcggtggtt ttaagcgcgt
    10261 cggacacgcc gggcatcatc cacagcaaac tcaaggccga cggcaattat ctgaaactct
    10321 taaacgtccc cgggcaaatc gcctgcggca aagtttccgg ttcgccgtac atttcgatgg
    10381 acggtcccgg cgtgttcaag tttgccgtca aaatgctgtc caaaatcgcc gatgacgtta
    10441 tcgaagaagc cggttatacc gccgctcaaa tcgactggat cgtgccgcat caggcaaacc
    10501 gccgcattat cgaatcgacc gcgaaacatt taggtttgag tatggacaaa gtcgtcctga
    10561 ccgtccaaga ccacggcaac acatccgccg catcgattcc gctggctttg gatacgggca
    10621 tccgcagcgg acaaatcaaa cgcggtcaaa acctgctgct cgaaggcatc ggcggcggtt
    10681 tcgcgtgggg cgcggtgctg ttgcaatatt gaacccgatg ccgtctgaaa caggctttca
    10741 gacggcattt cccatatcat gaagcggcag gctttcttca aactgatggc gtgtgcggca
    10801 tttctgtctg ccgtttcgct gcgcctcccc gtattgggcg cgtgttacgc aatattgtcc
    10861 ctctatgcgt ttgcacttta cggcatcgac aaacggcgtg ccgtgcgggg aaaacgccgc
    10921 attcccgaac accgcctgct gctgcctgcc ttgttcggcg gttgggcggg cgcatacttg
    10981 ggcagcagga tattcaggca taaaacggcg aaaaagcgtt ttgttgtgct gttccgtctg
    11041 actgtttcgg gcaatgtcct ggcgaccctc atcctgattt atagtggatt aaatttaaac
    11101 cagtacggcg ttgcctcgcc ttgccgtact atttgtactg tctgcggctt cgtcgccttg
    11161 tcctgatttt tgttaatcca ctatattatt ttgtcccgcc tgaatttttc gtaaaactcg
    11221 ggcagaatac ctgattatcc aaccaaacaa aggaatacta tgtcttttgc attcttcttt
    11281 cccggacaag gctcacaaag cctaggcatg atgaacggct ttgccgagca agccatcgtt
    11341 aaagccacat ttgacgaagc ttccgccata ttggggcagg acttgtgggc gatgattaac
    11401 ggcagcgatg ccgaaatcat cggtcaaacc gtcaacaccc agcccattat gctcgccgcc
    11461 ggcgttgccg tttaccgcgc ctatttggaa gcgggcggca aaacgcctgc cgccgttgcc
    11521 ggacacagcc tcggcgaata caccgcactc gttgccgccg gcgcattgaa ttttgccgac
    11581 gcggtcaaac tcgtgcgcct acgcgccgaa ctgatgcagt ccgccgtacc gcaaggcgtg
    11641 ggcgcaatgg cggcaatttt gggtttggaa gatgaacagg taaggcagat ttgcaccgaa
    11701 tccgcacagg atgaagtggt tgaagccgtc aacttcaact cgcccggaca agtcgtaatt
    11761 gcaggcaatg ccgccgccgt cggacgcgcc atgaccgccg ccaaagaagc cggtgccaaa
    11821 cgcgccctgc cgctgcccgt gtccgtacct tcccattgca gcctcatgaa acccgccgcc
    11881 gacaaactcg ccgaagccct caaaaccgtc gaaatcaagc agccgcaaat ccgcgtcatc
    11941 cacaacgccg acgttgccgc ctacgatgat gccgacaaaa tcaaagacgc gctcgtccgc
    12001 cagctttaca gccccgtacg ctggacggaa accgtcaacg cccttgtttc agacggcatt
    12061 gccgaatccg ccgaatgcgg accgggcaaa gtgttggcgg gcttggcaaa acgcatcaac
    12121 aaaaccgccg cgtgcagcgc gctgaccgat gccggacagg ttgccgcctt tatcgaagcg
    12181 cactgacttc gttccgcaaa aagcagcctg ccctcttcag gctgcttttc acgtccgaac
    12241 ggcaaacagc cgcatattta cgctataatc catcccgacc aaaccaccga cagcggctgc
    12301 cgttgcagtt tccgccccac cgatatgata gaaaaactga ctttcggact gtttaaaaaa
    12361 gaagacgcgc gcagctttat gcgcctgatg gcatacgtcc gcccctacaa aatccgcatc
    12421 attgccgccc tgattgccat tttcggcgtt gccgccaccg aaagctacct tgccgccttc
    12481 atcgcccccc tgattaacca cggcttttcc gcacctgccg cgccgcccga gctgtctgcc
    12541 gccgccggca tcatttccac cctgcaaaac tggcgcgaac agtttaccta tatggtttgg
    12601 gggacggaaa acaaaatctg gaccgtcccg ctcttcctca tcatcctcgt cgtcatccgt
    12661 ggcatctgcc gctttaccag cacctatctg atgacttggg tctccgtgat gaccatcagc
    12721 aaaatccgca aagatatgtt tgccaaaatg ctgacccttt cctcccgcta ccatcaggaa
    12781 acgccgtccg gcaccgtact gatgaatatg ctcaacctga ccgaacagtc ggtcagcaac
    12841 gccagcgaca tcttcaccgt cctcacgcgc gacacgatga tcgttaccgg cctgaccatc
    12901 gtcctgcttt acctcaactg gcagctcagc ctcatcgtcg tcctgatgtt ccccctgctc
    12961 tccctgctct cgcgctacta ccgcgaccgt ctgaaacacg tcatttccga ctcgcaaaaa
    13021 agcataggca cgatgaacaa cgtgattgcc gaaacccatc agggacaccg cgtcgtcaag
    13081 ctgttcaacg ggcaggcgca ggcggcaaac cggttcgacg cggtcaaccg caccatcgtc
    13141 cgcctcagca aaaaaatcac gcaggcaacg gcggcacatt ccccgttcag cgaactgatc
    13201 gcctcgatcg ccctcgccgt cgtcatcttc atcgccctgt ggcaaagcca aaacggctac
    13261 accaccatcg gcgaatttat ggcattcatc gtcgcgatgc tgcaaatgta cgcccccatc
    13321 aaaagccttg ccaacatcag catccctatg cagacgatgt tcctcgccgc cgacggtgta
    13381 tgtgcatttc tcgacacccc gcccgaacag gacaaaggca cgctcgcgcc gcagcgtgtc
    13441 gaagggcgca tcagcttccg caacgtcgat gtcgaatacc gttcagacgg catcaaagcc
    13501 ctcgacggct tcaacctcga catcagacaa ggcgaacgcg tcgccctggt cggacgttcc
    13561 ggcagcggca aatccaccgt cgtcaacctg ctgccccgct ttgtcgaacc gtctgccggc
    13621 aacatctgca tagacagtat cgacatcgcc gacatcaaac tcgactgcct gcgcgcccaa
    13681 ttcgccctcg tctcccaaga cgtattcctg tttgacgata ccctttttga aaacgtccga
    13741 tatagccgtc ccgacgcagg cgaagccgaa gtcctgttcg ccctccaaac cgccaacctg
    13801 caaagcctga ttgacagctc cccgctcgga ctgcaccagc ccatcggatc gaacggcagc
    13861 aacttatccg gcggacagcg gcaacgcgtc gccattgccc gcgccatttt gaaagacgcg
    13921 ccgatattat tattggacga agccaccagc gcattagaca acgaatccga acgcctcgtc
    13981 caacaagcgc tcgaacgcct gatggaaaac cgcaccggca tcatcgtcgc ccaccgcctg
    14041 accaccatcg aaggggccga ccgcatcatc gtgatggacg acggcaaaat catcgaacaa
    14101 ggcacacacg aacaactgat gtcccaaaac ggctactaca caatgttacg caatatctca
    14161 aacaaagatg ccgccgtccg gacggcataa acaaaatgcc gtccgaaatg gtacaatcgc
    14221 cccgaccctt tcagacggca tcatatccgc cgacccatcc gattatcttc aatcactgta
    14281 aaacccatta tgacccaaga caaaatcctc atcctcgact tcggttctca agttacccag
    14341 ctgattgccc gccgcgtgcg cgaagcccac gtttactgcg aactgcattc cttcgatatg
    14401 cctttggacg aaatcaaagc cttcaacccc aaaggcatca tcctctctgg cggccccaat
    14461 tccgtttacg aatccgacta tcaagccgat accggtattt ttgatttggg cattccggtt
    14521 ttgggcatct gttacggcat gcagtttatg gcgcaccact tgggcggcga agtgcagccc
    14581 ggcaaccagc gcgaattcgg ttatgcgcaa gttaaaacca tagacagcga gctgacacgc
    14641 ggcattcaag atggtgagcc aaacacactc gacgtatgga tgagccacgg cgacaaagtg
    14701 tccaaactgc ccgacggttt cgccgtcatc ggcgacacgc cgtcctgccc gattgccatg
    14761 atggaaaacg ccgaaaaaca attctacggc atccaattcc accccgaagt tacccacacc
    14821 aaacaaggcc gcgccctgtt gaaccgcttt gtcttggata tttgcggcgc gcaacctagc
    14881 tggacgatgc cgaactacat cgaagaagcc gttgccaaaa tccgcgaaca ggtcggcagc
    14941 gacgaagtga ttttgggttt gtccggcggc gtggactctt ccgtagccgc cgcgctgatt
    15001 caccgcgcca tcggcgacca actgacctgc gtgttcgtcg atcacggttt gttgcgcctg
    15061 aacgaaggca aaatggtgat ggatatgttc gcccgcaact tgggtgtgaa agtgattcac
    15121 gtcgatgccg aagggcagtt tatggcgaaa ctcgccggcg tgaccgatcc ggagaaaaaa
    15181 cgcaaaataa tcggcgcgga atttatcgaa gtatttgatg ccgaagagaa aaaactcacc
    15241 aacgccaaat ggctggcgca aggcacgatt taccctgacg taatcgaatc cgcaggcgcg
    15301 aaaaccaaaa aagcccacgc catcaaatcg caccacaacg tcggcggcct gcctgaaaac
    15361 atgaagctca agctgcttga gccgttgcgc gacttattca aagacgaagt gcgcgaactc
    15421 ggcgtcgctt tgggcttgcc gcgcgaaatg gtgtaccgcc atccgttccc cggtcccggt
    15481 ttgggcgtgc gcatcttggg cgaagtgaaa aaagaatacg ccgacttatt gcgtcaagca
    15541 gacgatattt tcatccaaga attacgcaat actaccgacg aaaacggcac atcttggtac
    15601 gacctgacca gccaagcctt cgccgtcttc ctgcccgtaa aatccgtcgg cgtaatgggc
    15661 gacggacgca cttacgacta cgtcgtcgca ctgcgcgcag tcatcaccag cgacttcatg
    15721 accgcacact gggcagaact gccttactca ctgctcggac gcgtgtccaa ccgcatcatc
    15781 aacgaagtca aaggcatcaa ccgcgtggtg tacgatgtca gcggcaaacc gcctgccacc
    15841 atcgagtggg aataaccagc aaacagggct gcaccgtccg gcgcagtctt tcgattatcg
    15901 gaaaaaagga aaaaatatga gcacacaaga tttaagcggc aaaatcgctt tggtaaccgg
    15961 cgcatcgcgc ggtatcggtg cagcaattgc cgacacactg gcggcagccg gtgccaaagt
    16021 catcggtacg gcgaccagtg agagcggtgc ggcggcgatt agcgagcggt tggcgcaatg
    16081 gggcggcgaa ggccgcgtat taaattccgc cgaacccgaa accgtcgaaa acctgattgc
    16141 cgacatcgaa aaaacgttcg gcaaactcga tattctggtc aacaacgccg gcatcacccg
    16201 cgacaacctc ctgatgcgca tgaaagaaga agagtgggac gacatcatgc aggtcaacct
    16261 caaatccgtg ttccgcgctt ctaaagccgt tttgcgcggt atgatgaaac aacgttccgg
    16321 ccgcatcatc aacatcacat ccgtcgtcgg cgtgatgggc aatgccggtc aaaccaacta
    16381 tgccgcggca aaagcaggct taatcggttt ctccaaatcc atggtgcgcg aagtcggcag
    16441 ccggggcatt accgtcaact gcgtcgcccc tggctttatc gataccgaca tgacacgcgc
    16501 cctgccggaa gaaacccgcc aaacctttac cgcccaaacc gccttgggca gattcggcga
    16561 cgcgcaagac atcgccgatg cggttctgtt cctcgcttcc gaccaagcaa aatacatcac
    16621 cggccaaacg ctgcacgtca acggcggtat gctgatgccc tgacgggcag ccgtaccgac
    16681 aatgccgtct gaagcccttt cagacggcat ttgcattctc aggcaaaatg aacacacgcc
    16741 acaccccgcc ctgcccctgc ggatcaggca caagctgaga cctttgcaaa actcctttcc
    16801 ctcccgacag ccgaaaccca aacacaggtt ttcggctgtt ttcgccccaa ata
//
LOCUS       DBBZXW010000032        16839 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.032, whole genome shotgun sequence.
ACCESSION   DBBZXW010000032 DBBZXW010000000
VERSION     DBBZXW010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16839
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.032"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(51..1220)
                     /gene="metK"
                     /locus_tag="ACJJD2_000978"
     CDS             complement(51..1220)
                     /gene="metK"
                     /locus_tag="ACJJD2_000978"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HGG7579536.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPSIAYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1403..1513)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1566..2462
                     /locus_tag="ACJJD2_000979"
     CDS             1566..2462
                     /locus_tag="ACJJD2_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG7579537.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="ACJJD2_000980"
     CDS             complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="ACJJD2_000980"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HGG7579538.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVR"
     gene            3577..3702
                     /locus_tag="ACJJD2_000981"
     CDS             3577..3702
                     /locus_tag="ACJJD2_000981"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579539.1"
                     /translation="MPLKTEKRILADFGTTAVSQKRNMPSEDRSDGIVAPYQSVP"
     gene            complement(3687..4874)
                     /gene="ccsB"
                     /locus_tag="ACJJD2_000982"
     CDS             complement(3687..4874)
                     /gene="ccsB"
                     /locus_tag="ACJJD2_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HGG7579540.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEGKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4867..6819)
                     /locus_tag="ACJJD2_000983"
     CDS             complement(4867..6819)
                     /locus_tag="ACJJD2_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HGG7579541.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGKGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7096..7719)
                     /locus_tag="ACJJD2_000984"
     CDS             complement(7096..7719)
                     /locus_tag="ACJJD2_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7579542.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7925..8554
                     /gene="yihA"
                     /locus_tag="ACJJD2_000985"
     CDS             7925..8554
                     /gene="yihA"
                     /locus_tag="ACJJD2_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HGG7579543.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8675..11071)
                     /locus_tag="ACJJD2_000986"
     CDS             complement(8675..11071)
                     /locus_tag="ACJJD2_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HGG7579544.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11223..12338
                     /gene="pilM"
                     /locus_tag="ACJJD2_000987"
     CDS             11223..12338
                     /gene="pilM"
                     /locus_tag="ACJJD2_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HGG7579545.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12341..12940
                     /locus_tag="ACJJD2_000988"
     CDS             12341..12940
                     /locus_tag="ACJJD2_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HGG7579546.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKVEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12941..13588
                     /locus_tag="ACJJD2_000989"
     CDS             12941..13588
                     /locus_tag="ACJJD2_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HGG7579547.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13606..14151
                     /locus_tag="ACJJD2_000990"
     CDS             13606..14151
                     /locus_tag="ACJJD2_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HGG7579548.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14170..16479
                     /gene="pilQ"
                     /locus_tag="ACJJD2_000991"
     CDS             14170..16479
                     /gene="pilQ"
                     /locus_tag="ACJJD2_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HGG7579549.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAAAPAKQQ
                     AAAPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRS
                     LDVADFKTPVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESG
                     GVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWD
                     QALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKY
                     KNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDE
                     LDVPAQQVMIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKW
                     GAETKINLPITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAK
                     IESGYEIPFTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQC
                     ASGNQTILCISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFK
                     TRGKKTDRRELLIFITPRIMGTAGNSLRY"
BASE COUNT         4551 a         4785 c         3838 g         3665 t
ORIGIN      
        1 aaaatgccgt ctgaactgtt cagacggcat ttttgatttt caaaccggaa ttacagcccc
       61 gctgccgccc tcaatgcagc agctttgtcg gtgcgctccc aagtgaactc aggttcttcg
      121 cggccgaaat gtccgtaagc ggcggattta ctgtaaatcg ggcgcaagag atcgagcatt
      181 tggacgatgc ctttggggcg caggtcgaaa tgttcgcgaa ctaaggtaat cagtttttcc
      241 tcgctgattt tgcctgtgcc gaaagtgtcg atggaaatcg aagtcggttc ggcaacgccg
      301 atggcgtagg aaacttggat ttggcattgg gttgccaatc ctgcggcgac gatgtttttc
      361 gccacatagc ggcaggcgta ggcggcggaa cggtcaacct tggacgggtc tttgccggaa
      421 aacgcgccgc cgccgtgcgg agccgcgccg ccgtaggtat cgacgatgat tttacggccg
      481 gtcaaaccgc agtcgccttg cgggccgccg atgacgaagc ggccggtcgg gttgatcagg
      541 tatttggttt cgtcggtcag cagttcagac ggcaggacgg gcttgataat ctgctcgatg
      601 acggcgtttt tcagttcttc gtaagcgatg gacggatcgt gctgggtaga gaggacgacg
      661 gtatcaatgc gttttacctt accggtttcg ctgtcgtaaa ccacggtcaa ctgcgctttt
      721 gcgtcgggac gcagccacgg caggcggccg tctttacgca attcgctttg gcgttgcatc
      781 aggcggtggc tgtaatagat ggcaaacggc atcagggtcg gggtttcgtc gcaggcataa
      841 ccgaacatca aaccttggtc gcctgcgcct tggttcaagt cgataccttc gccttcgttt
      901 acgccttggg cgatgtcggg ggattgttgg tcgtagtaca cgccgaccgc gcagccgttg
      961 gcatcaaagc ccagctcgga ggagttgtag ccgatgcgtt tgatggtttc gcgtgcgact
     1021 ttgatgtagt ccacttgggc ggtggtggtg atttcgcctg ccaatacgca caagcctgtg
     1081 ttgaccaaag tttctgcggc gacacgcgct ttggggtctt gcgccaagat ggcatccaaa
     1141 atcgcatcgg atacttggtc ggcaactttg tccggatggc cttcggatac cgattcggaa
     1201 gtaaacagat attcgctcat tgagattttc cttgaaaaac aaaccatctt cttcagacgg
     1261 catgttgtat gaacataatg tcgacagcgg gaaatatagc aaaatttccc tattcatacc
     1321 attcagttga gaaatattcc catttgaatg gcactttgga atctctgccc gtacgtttct
     1381 tacaggcaaa aaaattcccg catcaagcgg gtttggattg ctctggtgag ccacatcggc
     1441 ttttcaaccg tccaccttac ttttcctttt gaaaagcagg ttggcatgga attcccaact
     1501 cttaatgcag cgcggatggt agcagaaaag cctttccgcc gcaatacttc cctttttcag
     1561 acggcatgtt tcgtttacaa ttcgggctgt ttcccccttt gcgaaccgcc atgcacatcc
     1621 tgttgaccgc cctgctcaaa tgcctctccc tgctgccact ttcctgtctg cacacgctgg
     1681 gaaaccggct cggacatctg gcgttttacc ttttaaagga agaccgcgcg cgcatcgtcg
     1741 ccaatatgcg tcaggcaggc atgaatcccg accccaaaac agtcaaagcc gtttttgcgg
     1801 aaacggcaaa aggcggtttg gaacttgccc ccgcgttttt cagaaaaccg gaagacatag
     1861 aaacaatgtt caaagcggta cacggctggg aacatgtgca gcaggctttg gacaaacacg
     1921 aagggctgct attcatcacg ccgcacatcg gcagctacga tttgggcgga cgctacatca
     1981 gccagcagct tccgttcccg ctgaccgcca tgtacaaacc gccgaaaatc aaagcgatag
     2041 acaaaatcat gcaggcgggc agggttcgcg gcaaaggaaa aaccgcgcct accagcatac
     2101 aaggggtcaa acaaatcatc aaagccctgc gttcgggcga agcaaccatc gtcctgcccg
     2161 accacgtccc ctcccctcaa gaaggcgggg aaggcgtatg ggtggatttc ttcggcaaac
     2221 ctgcctatac catgacgctg gcggcaaaat tggcacacgt caaaggcgtg aaaaccctgt
     2281 ttttctgctg cgaacgcctg cctggcggac aaggtttcga tttgcacatc cgccccgtcc
     2341 aaggggaatt gaacggcgac aaagcccatg atgccgccgt gttcaaccgc aatgccgaat
     2401 attggatacg ccgttttccg acgcagtatc tgtttatgta caaccgctac aaaatgccgt
     2461 aacgaaaata aaaatgccgt ctgaacaatt tcagacggca ttttgtcatc tgacgatttc
     2521 cgacagcggc cagcgcggac ggacattgaa cgcaccgacc tccctgccct tgcccaggtg
     2581 catcgcaccg gcaaaggcaa tcatggcacc gttgtccgtg cagtatgccg tcggcgggaa
     2641 aaacacgctg actttttcgg acggatgttt cggcttgcct tttggggtcg ggatttgcac
     2701 cgtcatattg ccgaaagttt cacggagttt gcggtttgca ccgaccccgc cggcgaccac
     2761 tacggttctg aaccctgtct gcaacagggc ttttttcact ttcgccgcca acacatcgac
     2821 taccgcatct tgaaacgcac ggcaaatatc gttgcgggtt tgctcgggaa tggtttccga
     2881 accgtttgcc tcacgcactt tttcaacggc agtcaaaaca gcggttttca aacctgaaaa
     2941 actcatctgc aaatcgtcgg aatgaatcat cgggcgcgga aaaacaaacg cttcgggcct
     3001 gcccgattcc gcaagttccg acagtttcgc accgcccgga tacggcaagc ccagcagttt
     3061 cgccgttttg tcgaatgcct cgcccgccgc atcatcgacg ctctcgccca aaagcgcgta
     3121 gtcgcctatg cccctgaccg ccataatctg cgtatgcccg cccgaaacca gcagcgcgac
     3181 aaaaggaaag tcgggttttt cctccgccaa cagcggcgac agcagatgtc cttccaaatg
     3241 atggacggga ataacaggct tgtccaacgc taaagccagc gcgttggcgt agctcgaacc
     3301 cgccagcagc gcaccgccca aaccgggccc ctgcgtaaag gcaaccgcgt caatgtcgcc
     3361 atacgatgcg cccgcctgcg ccaaacagcc ttcagtcaac ggaacaaggc ggcggatatg
     3421 gtcgcggctt gccaattccg gcacaacccc gccgtattcg gcgtgcattg ccatttgagt
     3481 gtgcaggcag tgcgcccgca atccacgttc cgtatcgtaa agcgcaacac ctgtttcgtc
     3541 gcaagaagac tcgattccta ataccaacat ggtctgatgc cgttaaaaac tgaaaaacgt
     3601 attttagcgg atttcggcac gactgccgta tcccaaaaac ggaacatgcc gtctgaagac
     3661 cgttcagacg gcatcgtcgc accgtatcaa agcgttccgt aagaatgcag cccgctcaaa
     3721 aacatattca cgccgataaa ggcaaatgcg gttacgaaca aaccgataat cgcccaccac
     3781 gccagcactt tgccgcgcca accggcaacc agccgcaagt gcagccaaac ggcgtaattg
     3841 agccagacga tgaacgccca cgtctctttc ggatcccaac tccaatagcg tccccaagca
     3901 tctgccgccc acagcgcacc caaaatggtg gcaatagtaa agaacagaaa gccgacggca
     3961 atcgccttat acatcacctc gtcgatcaat gccgacggcg gcagccacag ttttccgcct
     4021 tttccttccg cacgcaggga aaccagttcg gcaataccga gcatcgcgga aatgcaaaac
     4081 gcgccgtaac cgataaagtt tgccggaacg tggattttca tccaccagga ctggagcgcg
     4141 ggaatcagcg gctggatggt atgcgcctcg cgggacacgc tgtaccacaa gacaaatcca
     4201 accacgaccg ccataaagcc gaacacgaag ccgcccaatt tctgtatggc gaacttacct
     4261 tcataataaa gatacatcag cgcggtaatc accaaaaaca ggatgaacac ttcatacagg
     4321 ttggaaaccg gaatatgccc cgcatcggga cggagcagat agctttcgtg ccaacgtacc
     4381 agcagaccgg taaagcctgc tacggcagac acccatgcaa acacggttcc catacccaac
     4441 agcgtgttgg tcggcacatt ttttacgctt gccaaaaccg cgcccgaaat ataagcgaac
     4501 agggcgaaaa agacaaaggc gcactgccac atgatcgccg attggctgct gaggaaatac
     4561 cgcaacagga aaatctctgc cgatttgatg ttgccgccat acagaccgac ggcggcatag
     4621 gcaagcaata cgcttaaagg aacaaaccag cgcatcggtt tgaaaaacca acccaaaaac
     4681 acggcaatac cggcactcgc ccacaacatg accgtttcgt aaatgtccat atgcataccg
     4741 gaacgggtct gtacgaaaac cgtagccgca aaaaccagca cggcaaatac ccaatcccaa
     4801 agattcagat tgctgatcaa agacttctga atcagcagct cgtgttccgg aagggtttta
     4861 tagtgttcag tcatgattca agtccttgcc gagccgttgc agactctcga cgtgttttgg
     4921 aaattccttc tgcaaatccc gttcactgcg ggccgaagac atggcaaaac ggattttgcc
     4981 gtctgaaaac aatacccacg cccgtttttc gcgcacataa aacatcaata ccgtacccaa
     5041 taccaacagc accgagccga gatagaccaa aagcgcaccc ggggaacggg tcatctgcaa
     5101 acccgacgaa cgcacctcgg aaaacccatc aagttgcagc agcataggcg cgggatattc
     5161 ggtcaaaccc gtgtacgcat ccatactgtg cagcaggaaa cggttccgcg cttcatcctg
     5221 ctgccattcg ggcaagccgt accggcgtat ggtttcatcc aaagcagcgt tcatcacgcc
     5281 gtaaagcatt tcgtagaaat agccctgcat cttatcctgc tgctctttcg ggatattgga
     5341 cgtaataaat tcgtccaatc ccaaatagcc tttttgtgca aagatgttca gcgtgttttc
     5401 cgcagccagc atgaattgtt cgcggatttc ggcaggtgcg tctttggttg cgtcggcaac
     5461 cagacgtttg cgccccttcc cgtctttcag aaactcgcgc aacgccataa aggtgtccgc
     5521 tttcaactgc ttgtccaagg ggatacgcag ccagcggtat tgctgctgca agccgctgcg
     5581 cgtgccggta atccaaaaat aatcctgttc ctgcaaaacc ggcagcatat agtttttata
     5641 ttcgaccgcc tgccctgccg catcacggat acggtaaaca atggaagggc cgatattggt
     5701 gtatttttta ccttcctgag taacggcgcg gacatcgttc agcgtggatt tcaggctttt
     5761 ttcccgttcc gcgccctcgc tcatgtcctc cacattcata gaagtgaact gatcgaactc
     5821 aagacgatat ttgtgtttgc caatttccaa cggaaactgg tgtatggatg ttgccttcaa
     5881 cacgacaggc tcgcgcgaag catcacccaa attccacgcc ttgaatgtca aatccgaacc
     5941 gccgtcggca aaactcgcct gataaatcgt gatgccgtgc aaggtcaaag gatggttcac
     6001 gcggatggtg cgctcgagtt tctcaccggt tgccttgtcc gtcacttcaa tatcactggc
     6061 aaaatcgcgc ggcataccgg tattgtaaaa gtcgatatga aattttttca gtttgacttc
     6121 aaaaggcaag tcctgaacca atatcccgtt gtcggcattc aggaaaacca catccgcact
     6181 ctgcccctcg gaaatattga cgttgcccct aaatgagaga ttggacgcac ccaaaatact
     6241 ttcgggcttg aaatccttgg cataaaccgc ctgattgtcc ggaacaatcc gaccggtcag
     6301 catacccagt ttcaacagca ggttactgtc tatcaacccg cccaggcaaa tgacaatcaa
     6361 agcaacatgg gcaaagatat agccccattt gttcattgtg ccttttttgg cggcaatcag
     6421 aaccgacccg tcttcacggt taatggtttt tccctgaaaa ccttgtactt ccagataacg
     6481 tttggcaacc tcgggcgcaa tttttacatc caacagcgaa gaatggcgca tcgccgccag
     6541 agatttttct ttaacctttt cccgaaaaga cttcatttcg cgccagaacg gcggcacatt
     6601 gcgaatcagg cacaaactgg tagaaaccac caaaaacatc atgataacga caaaccatgc
     6661 cgaagcatag acgtcataca gtcccagaaa accaaaaatc tgcgcccaaa acgatccgaa
     6721 tttgaccaaa taatccgtct gcggctggtt ttgctgcaac accgtaccga taaccgatgc
     6781 aatacccagc agactgagca aagcgactgc aaagcgcatg gagctgaaaa aagcgaacca
     6841 cggacgggaa agaagtgggg gagatctacg ggatttactc attgtgtgtt tattccgcca
     6901 tcaggaatat gggaaagcag aattgggcaa acagaaaaca acgtcccgat tctactgtct
     6961 tgatgctttt tatttcaaga caatgaagac agcctgcatc gattccaacg gttgcgattg
     7021 aaaaaactta tcgcagaatt gcctgaagcc gtctgaaaac ttttcagacg gcctctaaaa
     7081 cagactattg cggaattaac gcaaaccttg gataaagttg gcgaccgctt tcaaatcttc
     7141 ttcagacata cggtttgcaa tatcttccat gatggtattt ttacgctgac cggacttgta
     7201 ggcattcatc tgttcaacaa tatatgcctg atgctgaccg cccaaacgcg gataagcctg
     7261 aatttcgctt ccgcctcccg gcatacccgc accgctcgga ccgtggcagg acatacacgc
     7321 cggcactttt ttatcgctca aaccgccgcg atagattttc gcacccaatt cgggattttc
     7381 cttaggattg gcttcaccgg atttgggctg ctgtttggca tagaatgcgg atacgttcaa
     7441 aatatcctga tcgctcaaat tcattaccac cggtttcatc acagctgccg aaccgtgggt
     7501 gcgtttaccg tcgcggatgc cgatagtttg atgatagatg taagcagtat gctgtgccgc
     7561 caaacgcgga tacatcgcaa tgccgctgtt accgtctgct gcatggcaag ccgcacaaac
     7621 cgttgcggca acctgtttgc ctttttccac gtctgctttg ggagaggcgg aaaccgcacc
     7681 ggcagccaaa acaaaggcca ataaagtcaa tcgtttcatg gagtgctcct gattacagca
     7741 ttggataacg caacaatgct ctttttatat tcaaatacgg gatttttgac ccgattaaaa
     7801 ccgatgattc tgtaaacgtg ttattctata ctaaatttac attaaattac cactgtgttt
     7861 cacataaaac caaccgcata tttttgctgt cggacaaacg gcggcggaaa acaaggatat
     7921 gcccatgaac ctttttcaaa acgccaaatt cttcacgacg gtcaaccacc ttaaagacct
     7981 gcccgacacc cctctcgaaa ttgcctttgt cggcaggagc aatgccggaa aatccagtgc
     8041 catcaatacc ctgaccaacc atgtccgtct tgcctacgtt tcaaaaacac ccggacggac
     8101 gcagcatatc aacttcttcg agctgcagaa cggcaatttt atggtcgatt tgcccggcta
     8161 cggttatgcc caagtccccg aagcagtacg cgcacattgg gtcaatctgc tcggcgacta
     8221 tctgcaacag cgcaaacagc ttatcgggct ggttttgatt atggatgccc gccatccttt
     8281 aaaagaactc gacatccgta tgctggactt tttccacacg accggcagac cggttcacat
     8341 cctgctgtca aaagccgaca aattatccaa aaacgaacag ataaaaaccc tgtcccaagt
     8401 caaaaaactg ctcaaacctt attccgacag gcaaaacatc agcgtacagc tgttttccag
     8461 cctgaaaaaa caaggtattg acgaggccaa ccgaactgtc ggaagctggt ttgacgcagc
     8521 agatgccgcc gcttcctctc cagaggaaaa ctgaccccaa ttatacggaa accgtatttc
     8581 ccccacttga ccgaccgcaa acatttaaaa aattgccact gccaaatcta aaatgccgtc
     8641 tgaaagactt ttcagacggc attttgcgga gtctttaaaa cagagaatcc aactgctgct
     8701 gtttggaacc agtattactc ggaagcaccg gcgtttcctg catatcttgg cggacttcgt
     8761 catccgccgc ctgccgtccg ccttctgccg cgcccccgtc atcttctttt gcccgtcggg
     8821 aaggttgcgg cgcaataccg ctgttgtcca gcgtcaagcc cggatcggtt accatacgtt
     8881 ccttcatata gtattcgcca ttgctgctga ccacaccttc aggcattttc atccccttgc
     8941 cctgctttcc tttcaacgca aaacgcatat agtccaccca aaccggcacc gcaatcgtac
     9001 cgccgtagcc gacacgcccc atactcttag gtttgtcgaa gccgatatat acggcagtaa
     9061 ccacatcagg gttaaaaccg acaaaccacg catccttatt gtcattggtc gtacccgttt
     9121 taccggcaat atccgttctt cccaacgcag ctgcccccct tgccgtacca acacggacca
     9181 catcctgcat aatcttatac ataatatagg cattgcgcgg atcgattgcc tgaggcgcat
     9241 tttgcccggc caccaaaggt tgcatttggg cgcgcaacct gccgtctctg tcataaatct
     9301 tatcgattac gtgcgaagaa accctatatc cgccgttcgc aaatacgcta tatgcctccg
     9361 ccactttcaa cggcgttgtc tcgcccgtac ctaaagccat agacaggctt gccggcagct
     9421 cggacgacct gaagccgaaa cgccggatat actgttgcgc gtaaccgaca ccgatagaca
     9481 tcaaaatacg gatggaaacc atattcttgg aagccgtcag agcctgtctc aaagtaatgt
     9541 agccggaata tctgccgtct gaatttttag gtgtccaaac cgaaccgttc ggccctttcc
     9601 ccggcaggga aatcggcgca tcgttaacca ctgtggacgc ggtcatcccc ttagataatg
     9661 ccgccgaata gacaaacggc ttaaaggtcg aacccggctg ccgcattgcc tgaacggcac
     9721 gattgaatgt tttgctgtga aaatcataac cgccgaccag cgcgcgcaca gctccggttt
     9781 ttgcatccag cgaaaccaaa gccccctgca gcaacggctc ttgaaccacc gcccaacgcc
     9841 cgccgttgtt tttgacacgg atgaccgcgc ccctgcggat acggtcctcc cccatttttt
     9901 cattattgac cgcgcgggcc gcaaaaccca aggcgcgcct gtcaagcgta acccgcctgc
     9961 cgccgggcag ctgtatgacg acatttttct ttttagtcac atccaacaca acggcgggaa
    10021 ccattttatc gacggtatag agtcccgaca gatactggct gacagtctcc tcgacatctt
    10081 cactcttact caaatcgata tagttttccg caccgcggta gctgctgccg cgatcgaaat
    10141 tccgtagagc cttgcgcaat gcctcggttg ccaccttctg atgatcggcg cggaccgtgg
    10201 tataaacctt aaaaccctgc gtataggcat cttcaccgta tttctcatac agttcctgac
    10261 gcaccatttc cgccacatat aaagcactct gatcgatttt ccgaacaaac cgctcgtaat
    10321 gcagttcctc attcaacgcc tgatcgcgct gttgcacggt aatcatcttc tcctcgagca
    10381 tattgttcaa aatatacttc tggcgcaact tggcacgttc cggattaaca atcggattat
    10441 aggcagacgg agccttgggc agtcccgcaa gcatggcggc ttccgccaaa gtcaaatctc
    10501 ggacattctt attgaaatag atttgcgcgg cagatgcaaa accataggcg cgctgaccga
    10561 ggtaaatctg attgaaatac aactcgagga ttttgtcttt gcttaaagac tgctcgattt
    10621 tataggcaag caacacctca ttgaatttgc gtgtgaacgt tttttcactg ctcaaataaa
    10681 aatttttcgc cacctgctgc gtaatcgtac tcgcacccga ctgcacgctg ccggacacga
    10741 cattgccgac ggcagcgcgg gcaacacccc aaacatccac cccccaatgc cggtaaaagc
    10801 gtttatcctc ggcggcgata accgcattcc gcaacacctc tgggaaatcg ccgatttttg
    10861 taaattcgcg ccgctgctcc ccatacatac cgatgacttc cccatccgcc gaataaatag
    10921 tcaacggcat tttaggctgg taatgctgca aagaatccaa agacggtagt ttcggatacg
    10981 ttaccaaaat agcaatggca accaaaccca ctccaaatac acaaaaccca aaaaccaaac
    11041 caaaacaagt cgttaaaatc tttttaatca tagctgaata ataatttacc attattggta
    11101 ttaaataaag taaaatagca accgatttct acaaagcacg gtttcaatgt gcaaagaaca
    11161 aggaatccat tacggatacc gaaacggtta ctcactgtac aaataaagca ggaactttca
    11221 tcatgcgctt gtttaaaagc ttgaaaaacc ctaaaaaaac agatgccaag ctccctaaaa
    11281 aatcttcggg actcaataac cgcgcggcaa tcggcatcga tatcgaccag cattccatca
    11341 aaatggtcca attgtcagga cgtagtttaa accaaattca attggaaaaa tacgtcattg
    11401 ccaaattacc aaagaatatc attcaaggca ataaagtcca aaattacgat caacttgtta
    11461 catatttgca acaagcctat gccaaactgg gtacttcgtg caaaaacatc atcgcgtccg
    11521 tcccgcaaaa tctggcaacc atcgaacaat tgacctacac agacaaagat gcagaattag
    11581 acctgcaggg gttcgtggag tcctccatct ccgaagtcag ctcgatatcg ctcgaagaag
    11641 ccaattacga ctatcaggtc ttgtcccaat cggccgccgg cgaagctgtg ttggccgtcg
    11701 catcgagaaa ggatgaaatc gaacccctga ttgacgcatt caacgccgcc ggtatgaaat
    11761 tatccgcgct tgatgtggac attttcggac aatacaacgc ctacgcgcta tggataaacc
    11821 atttcgcccc cgagcttgca gccgaaaaag tcgccatttt cggcgtatat gccgcacaga
    11881 cctacgcctt ggtcatccaa gacggaaaaa tcctatacaa acaggaaacc tccgtcagcg
    11941 aagaacagct caaccaactc atccagcgca cctatcaggt aacagaagaa aaagcggaag
    12001 aaatcatcaa ctccccgcaa aaaccttccg attaccaaga aagcgtggca aactatttca
    12061 accagcagat tacccaagaa atacaaaggg tcttgcagtt ttattacacc acgcagaccg
    12121 cagacgatat gaccgacatc aagcatatcc tgctgaccgg ggaagcggcg cgccaggaag
    12181 gtatcgccca aaccgtcgcc tcacaaacca atgcagatgt acaatgcgtc catcccgcgc
    12241 gttattttgc ggacaacctc aaaacagaca aacaacaatt cgaacttgat gcgccgacac
    12301 tgaccagggc gttcggtttg gcggtacggg gattataatt atgaacaatt taatcaaaat
    12361 caacctcctc ccctacaggg aagagatgaa caagcgcaaa cagcagcagt ttaaaacgct
    12421 gatgtacggt gccgtgctga cgggcgttgc cgccgttgcg gcaacctacc tgtttatcga
    12481 caatatgatc aataaccagt cggaaagaaa cacgctgctg gaaacctcca tcgcacactt
    12541 ggataccgag ctgtcggaaa tacaaaagct caaacaggaa aaagatgcct tcctgattaa
    12601 gaaaaacaaa gtcgaggagc tccagctcaa acgcctccaa gccgcaaaaa tcctcgacag
    12661 cctgaatgag gccgtccccg gaagcaccta cctgacctcg ctggatgccg ttaccgccga
    12721 ctcttatcgg ctcagcggca ggacatccag cgacaaccgc gttgccgcca tgatgagggc
    12781 gatgcccaat accggcatat tcaagcaacc cgaattgtta agcatcaaga aaaacaattc
    12841 gcatcaagaa tttacccttc aggcaacatt acaacccatc gtaaaggcgg ccgaatccaa
    12901 agagaatccg gcttcgggaa acgcacagga ggcaaactga atggcttcta aatcatctaa
    12961 aaccaacttg gatctcaaca accttcacct gctcaacctt cctgccaggc tttttatcgc
    13021 cctgctggcc gttgccgccg tgctggggct cggttatgcc ggattgttca aaagccagat
    13081 ggaatccctt gaggaatacg aagcaaaaga aaccgaactg aaaaacacct acaaacagaa
    13141 aagtatcgac gcggccagcc tgaacaacct gagggacgaa cttgcctcaa tccgctctgc
    13201 cttcgatatc atgttgaaac agctgccgac agatgcagaa attcccaatc tggttcaaga
    13261 gcttcatcag gcaggttcga gcaacggcct gcgcttggac agcgttatgc cccaacctcc
    13321 cgtagatgac ggccccatca aaagattacc ctattccatt tccattaccg gaaattacga
    13381 acagatcagc caatttaccc gcgatgtcgg cagcctctcc cgaatcatta cccttgagtc
    13441 gctgaaaatc gcccaatctc cggaaaacgg cggcaatcct gacggcaaga gcagcatcct
    13501 gaacctcagt gccattgcca ccacctacca agcaaaatcc gtagaagagc ttgccgcaga
    13561 agcggcacaa aatgccgagc aaaaataact tacgttaggg aaaccatgaa acactatgcc
    13621 ttactcatca gctttctggc tctctccgcg tgttcccaag gttctgagga cctaaacgaa
    13681 tggatggcac aaacgcgacg cgaagccaaa gcagaaatca tacctttcca agcacctacc
    13741 ctgccggttg cgccggtata cagcccgccg cagcttacag ggccgaacgc attcgacttc
    13801 cgccgcatgg aaaccgacaa aaaaggggaa aatgcccccg acaccaagcg tattaaagaa
    13861 acgctggaaa aattcagttt ggaaaatatg cgttatgtcg gcattttgaa gtctggacag
    13921 aaagtctccg gcttcatcga ggctgaaggt tatgtctaca ctgtcggtgt cggcaactat
    13981 ttgggacaaa actacggtag aatcgaaagc attaccgacg acagcatcgt cctgaacgag
    14041 ctgatagaag acagcacggg caactgggtt tcccgtaaag cagaactgct gttgaattct
    14101 tccgacaaaa acaccgaaca agcggcagca cctgccgcag aacaaaatta agaagaggat
    14161 tactccatta tgaataccaa actgacaaaa atcatttccg gtctctttgt cgcaaccgcc
    14221 gcctttcaga cagcatcggc aggaaacatt acagacatca aagtttcctc cctgcccaac
    14281 aaacagaaaa tcgtcaaagt cagctttgac aaagagattg tcaacccgac cggcttcgta
    14341 acctcctcac cggcccgcat cgccttggac tttgaacaaa ccggcatttc catggatcaa
    14401 caggtactcg aatatgccga tcctctgttg agcaaaatca gtgccgcaca aaacagcagc
    14461 cgtgcgcgtc tggttctgaa tctgaacaaa ccgggccaat acaataccga agtacgcggg
    14521 aacaaagttt ggatattcat taacgaatcg gacgataccg tgtccgcccc cgcacgcccc
    14581 gccgtaaaag ccgcgcctgc cgcaccggca aaacaacagg ctgccgcacc gtctaccaag
    14641 tccgcagtat ccgtatccaa accctttacc ccggcaaaac aacaggctgc cgcaccgttt
    14701 accgagtccg tagtatccgt atccgcaccg ttcagcccgg caaaacaaca ggcggcggca
    14761 tcagcaaaac aacagacggc agcaccagca aaacaacagg cggcagcacc agcaaaacaa
    14821 caggcggcag caccagcaaa acaaaccaat atcgatttcc gcaaagacgg caaaaatgcc
    14881 ggcattatcg aattggctgc attgggcttt gccgggcagc ccgacatcag ccaacagcac
    14941 gaccacatca tcgttacgct gaaaaaccat accctgccga ccacgctcca acgcagtttg
    15001 gatgtggcag actttaaaac accggttcaa aaggttacgc tgaaacgcct caataacgac
    15061 acccagctga ttatcacaac agccggcaac tgggaactcg tcaacaaatc cgccgcgccc
    15121 ggatacttta ccttccaagt cctgccgaaa aaacaaaacc tcgagtcagg cggcgtgaac
    15181 aatgcgccca aaaccttcac aggccggaaa atctcccttg acttccaaga tgtcgaaatc
    15241 cgcaccatcc tgcagatttt ggcaaaagaa tccgggatga acattgttgc cagcgactcc
    15301 gtcaacggca aaatgaccct ctccctcaaa gacgtacctt gggatcaggc tttggatttg
    15361 gttatgcagg cacgcaacct cgatatgcgc caacaaggga acatcgtcaa catcgcgccc
    15421 cgcgacgagc tgcttgccaa agacaaagcc ttcttacagg cggaaaaaga cattgccgat
    15481 ctgggcgcgc tgtattcaca aaacttccaa ttgaaataca aaaatgtgga agaattccgc
    15541 agcatcctgc gtttggacaa tgccgacaca accggaaacc gcaatacgct tgtcagcggc
    15601 aggggcagcg tgctgatcga tcccgccacc aataccctga ttgttaccga tacccgcagc
    15661 gtcatcgaaa aattccgcaa actgattgac gaattggacg tacccgcgca acaagtgatg
    15721 attgaggcgc gtatcgtcga agcggcagac ggcttctcgc gcgatttggg cgttaaattc
    15781 ggcgcgacag gcaagaaaaa gctgaaaaat gatacaagcg cattcggctg gggggtaaac
    15841 tccggcttcg gcggcgacga taaatggggg gccgaaacca aaatcaacct gccgattacc
    15901 gctgccgcaa acagcatttc gctggtgcgc gcgatttcct ccggtgcctt gaatttggaa
    15961 ttgtccgcat ccgaatcgct ttcaaaaacc aaaacgcttg ccaatccgcg cgtgctgacc
    16021 caaaaccgca aagaggccaa aatcgaatcc ggttacgaaa ttcctttcac cgtaacctca
    16081 atcgcgaacg gcggcagcag cacgaacacg gaactcaaaa aagccgtctt ggggctgacc
    16141 gttacgccga acatcacgcc cgacggccaa atcattatga ccgtcaaaat caacaaggac
    16201 tcgcctgcgc aatgtgcctc cggtaatcag acgatcctgt gtatttcgac caaaaacctg
    16261 aatacgcagg ctatggttga aaacggcggc acattgattg tcggcggtat ttatgaagaa
    16321 gacaacggca atacgctgac caaagtcccc ctgttgggcg acatccccgt tatcggcaac
    16381 ctctttaaaa cacgcgggaa aaaaaccgac cgccgcgaac tgctgatttt cattaccccg
    16441 aggattatgg gtacggccgg caacagcctg cgctattgat gcgtcaaaat aagggcatat
    16501 gttttacggc atatgccctt tctttatgct ttttgccgcg accgaaatgc cgtcattccc
    16561 gcgcaggcgg gaatccagtc cgttcagttt cggtcatttc tgataaattc ctgttgcttt
    16621 tcatttctgg attcccactt ttgtgggaat gacggcggaa ggggtaaatc ctcgcaatcc
    16681 aaagcctcgt catttccaca aaaaacagca acccggaaca gcaacttaaa accccgtcat
    16741 tcccgcgcag gcaggaatcc aacttgtccg gttccggttg tttttcgtct cgtaactttt
    16801 gagccgtcat tcccgcgcag gcgggaatct aggtctgtc
//
LOCUS       DBBZXW010000033        16486 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.033, whole genome shotgun sequence.
ACCESSION   DBBZXW010000033 DBBZXW010000000
VERSION     DBBZXW010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.033"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            241..1305
                     /locus_tag="ACJJD2_000992"
     CDS             241..1305
                     /locus_tag="ACJJD2_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HGG7579550.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIVHD
                     DVPTGPGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1446..1769
                     /locus_tag="ACJJD2_000993"
     CDS             1446..1769
                     /locus_tag="ACJJD2_000993"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HGG7579551.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1841..2164
                     /locus_tag="ACJJD2_000994"
     CDS             1841..2164
                     /locus_tag="ACJJD2_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HGG7579552.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEVVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQLLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2211..2414
                     /gene="tatA"
                     /locus_tag="ACJJD2_000995"
     CDS             2211..2414
                     /gene="tatA"
                     /locus_tag="ACJJD2_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HGG7579553.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2418..3101
                     /gene="tatB"
                     /locus_tag="ACJJD2_000996"
     CDS             2418..3101
                     /gene="tatB"
                     /locus_tag="ACJJD2_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HGG7579554.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSDTSAETLGNDGQIGGTAEPSE
                     TDKDRAWREYLTAPSSPAVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSRA
                     KPKLRVRKS"
     gene            3116..3886
                     /gene="tatC"
                     /locus_tag="ACJJD2_000997"
     CDS             3116..3886
                     /gene="tatC"
                     /locus_tag="ACJJD2_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HGG7579555.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGMMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTGQLKHARPYVIVGAFVIAAVITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIRPPAKT"
     gene            3939..4544
                     /locus_tag="ACJJD2_000998"
     CDS             3939..4544
                     /locus_tag="ACJJD2_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HGG7579556.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYRVVKLPADIDETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPHSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGNAENRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIGGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4560..4913
                     /locus_tag="ACJJD2_000999"
     CDS             4560..4913
                     /locus_tag="ACJJD2_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HGG7579557.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4903..6717
                     /locus_tag="ACJJD2_001000"
                     /pseudo
     CDS             4903..6717
                     /locus_tag="ACJJD2_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
     gene            6907..7584
                     /gene="misR"
                     /locus_tag="ACJJD2_001001"
     CDS             6907..7584
                     /gene="misR"
                     /locus_tag="ACJJD2_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HGG7579558.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7598..9004
                     /gene="misS"
                     /locus_tag="ACJJD2_001002"
     CDS             7598..9004
                     /gene="misS"
                     /locus_tag="ACJJD2_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HGG7579559.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9122..11548
                     /locus_tag="ACJJD2_001003"
     CDS             9122..11548
                     /locus_tag="ACJJD2_001003"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7579560.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALAAANPSLLAEAL
                     HLPPYRHTTHNAVQFQFGSHPIYGNILTVRYAGQTTAALPPFTTQDSLHIAQFAELED
                     PQTLNQFLHILTTLSDHNLHIGKITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     HLKTLSLKNNTTVTITPLLPEDAEAKQQFVRSLSPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTARDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLHTDHKIT"
     gene            11593..11838
                     /gene="rpsP"
                     /locus_tag="ACJJD2_001004"
     CDS             11593..11838
                     /gene="rpsP"
                     /locus_tag="ACJJD2_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HGG7579561.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11854..12363
                     /gene="rimM"
                     /locus_tag="ACJJD2_001005"
     CDS             11854..12363
                     /gene="rimM"
                     /locus_tag="ACJJD2_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HGG7579562.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNSELQVKFEGINDRDLAFSLHGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12363..13112
                     /gene="trmD"
                     /locus_tag="ACJJD2_001006"
     CDS             12363..13112
                     /gene="trmD"
                     /locus_tag="ACJJD2_001006"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HGG7579563.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLSYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQTAKVIYLSPQGKPLTHQKAAEL
                     AELPHLILLCGRYEGIDERLLQTSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRSLIPKESRLLETIRQEQREIQS"
     gene            13128..13493
                     /gene="rplS"
                     /locus_tag="ACJJD2_001007"
     CDS             13128..13493
                     /gene="rplS"
                     /locus_tag="ACJJD2_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HGG7579564.1"
                     /translation="MNLIQQLEQEEIVRLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13815..14540
                     /locus_tag="ACJJD2_001008"
     CDS             13815..14540
                     /locus_tag="ACJJD2_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HGG7579565.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLSRQDIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFK
                     GINTAQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPSTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPDWCAS"
     gene            14575..15450
                     /locus_tag="ACJJD2_001009"
     CDS             14575..15450
                     /locus_tag="ACJJD2_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HGG7579566.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15527..16441
                     /locus_tag="ACJJD2_001010"
     CDS             15527..16441
                     /locus_tag="ACJJD2_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HGG7579567.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEYDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4300 a         5276 c         3606 g         3304 t
ORIGIN      
        1 ccgtactggt ttttgttaat ccactataaa tgccgtctga agccgattcg gttttcagac
       61 gacatcatta tttgacctga cgcaaacaga aagccttccg cgtgcttaaa cacatctctt
      121 gtagtaaaat atctaaacag attcaactgg aaacggtcag gcttcttcac gccattccca
      181 tttcaaccgc cgcctgccag attcagacgg tattcctact tgaaaacaag gagcgttaca
      241 atgaaagcag cacgttttta cgacaaaggc gacatccgca tcgaagacat ccccgaaccg
      301 accgtcgccc ccggcaccgt cggcatcaat gttgcctggt gcggcatctg cggtaccgac
      361 ctgcacgaat tcatggaagg cccgattttc attccgcctt gcggtcatcc gcacccgatt
      421 tccggcgagt ccgcacccgt cacgatggga cacgagttct ccggcgtggt ctatgccgtc
      481 ggcgaaggcg tggacgacat caaagtcggc caacacgtcg tggtcgagcc ttacatcgta
      541 cacgacgacg taccgaccgg cccgggcagc aactaccacc tctctaaaga catgaacttc
      601 atcggcttgg gcggctgcgg aggtggcttg tctgaaaaaa tcgctgtcaa acgccgttgg
      661 gtgcatccga tttccgacaa aatcccgttg gatcaagccg ctttgatcga accgctgtct
      721 gtcggacacc acgcctatgt acgcagcggc gcgaaagcag gcgacgtcgc attggtcggc
      781 ggcgcaggtc cgatcggttt gctgttggct gccgtgttga aagccaaagg catcaaagtc
      841 atcatcaccg agttgagtaa agcacgcaaa gacaaagcgc gcgaatccgg cgttgccgac
      901 tacatcctcg acccgtccga agtcgatgtt gtcgaagaag tgaaaaaact gaccaacggc
      961 gaaggcgtgg acgtggcatt cgaatgtacc agcgtgaaca aagtgttgga tactttggtc
     1021 gaagcctgca aacctgccgc caatttggtt atcgtatcca tctggagcca ccctgcaacc
     1081 gtcaacgtcc acagcgtcgt gatgaaagaa ctggatgtgc gcggcacgat tgcctactgt
     1141 aacgaccacg ccgaaaccat caaactggtc gaagaaggca aaatcaacct cgagcctttc
     1201 atcacccagc gcatcaagct ggacgaactg gtttccgaag gcttcgagcg tctaatccac
     1261 aacaacgaat ccgccgttaa aattattgtg agtccaaacc tgtaagcaaa ttacatttgc
     1321 aacagcacaa atgccgtctg aaacgctcag acggcatttt ccaacgaagc gcaacaggcg
     1381 tattgcccga gagcagccgt ttagcctatc attccgaaca aacagaaaca aacagaagga
     1441 aaatcatggg agattccgta ctatccgcca tccaacaaac catcacccag cgaaaatctg
     1501 ccaatccgtc cgaatcttac gtcgcacagc tcttgcacaa gggcgaggac aaaatcctaa
     1561 aaaaagtgat tgaagaggcg ggcgaagtgt tgatggcatc caaagacaaa aacccgtccc
     1621 acctggttta cgaagttgcc gacttatggt ttcacaccat gattcttctg acacaccacg
     1681 acctgaaggc ggaagacgta ttggacgaac ttgcgcgccg ccaaggtttg tcgggcttgg
     1741 ccgaaaaagc cgctcgcaca gaatcttgaa tttatattaa aatccgcact ttcccacatt
     1801 caatccgtct gaccgctgtt cagacggcat cggagccgtt atggacaact gtattttctg
     1861 caaaatcgcc gccaaagaca ttccggcgca aaccgtctat gaagacggcg aagtggtttg
     1921 tttcaaagac atcaaccccg ccgctccggt tcatctgctg ctgattccca aagtccattt
     1981 cgattcgttg gcacacgccg cgcccgaaca tcagctcctt ttgggaaaaa tgatgctgaa
     2041 agttcccgaa atcgccaaag cggcaggact ggcagacggc ttcaaaaccc tgatcaacac
     2101 cggcaaaggc ggcggacaag aggttttcca cctgcatata cacatcatgg gcacacccgt
     2161 ataaaccgtt atttcacaat caacccctaa tacttactta aggatacatc atgggcagtt
     2221 tttctctgac gcactggatt atcgtactga ttatcgtcgt tttgatattc ggcaccaaaa
     2281 aactgcgcaa cgtcggcaaa gacctcggcg gtgcggttca tgacttcaaa caggggctga
     2341 acgaaggcac agacggcaaa gaagcccaaa aagacgatgt aatcgaacac aaaaaagacg
     2401 aagacaaagc gtaatttatg tttgatttcg gtttgggcga gctggttttt gtcggcatta
     2461 tcgccctgat tgtcctcggc cccgaacgcc tgcccgaggc cgcccgcacc gccggacggc
     2521 tcatcggcag gctgcaacgc tttgtcggca gcgtcaaaca ggaatttgac actcaaatcg
     2581 aactggaaga actaaggaag gccaagcagg aatttgaagc tgccgctgct caggttcgag
     2641 acagcctcaa agaaaccggt acggatatgc agaacagtct gcacgacatt tccgacggtc
     2701 tgaagccttg ggaaaaactg cccgaacagc gcacgcctgc tgatttcggt gtcgatgaaa
     2761 acggcaatcc ctttcccgat gcggcaaaca ccctatcaga cggcatttcc gacgttatgc
     2821 cgtctgaacg ttccgatact tccgccgaaa cccttgggaa cgacgggcaa atcggcggca
     2881 cagccgagcc ttcggaaacc gataaagacc gcgcatggcg cgaatatctg accgcacctt
     2941 cttcgcctgc cgtacagacc gtcgaagtca gctatatcga taccgctgtt gaaacccctg
     3001 ttccgcatac cacttcgctg cgtaaacagg caataagccg caaacgcgat ttgcgtccca
     3061 aatcccgcgc caaacctaaa ttgcgcgtcc gtaaatcata aagagggcaa atccggtgtc
     3121 cgaaacacaa aacgaacaac ccgtccaacc gcttgtcgag catctcatcg agctgcgccg
     3181 ccgcctgatg tggacggttg tcggcatctt agtctgcttt ttcggcatga tgccgtttgc
     3241 ccaacaactc tatactttta tcgccgaccc gctgatggca aacctgccca aagacaccag
     3301 catgattgcc accgatgtca tcgcaccatt tttcgtgccg gtcaaagtta ccctgatggc
     3361 ggcattttta atttcgctgc cgcatacgct ctaccaaatc tgggcatttg tcgcgcccgc
     3421 actctaccaa aacgaaaaac gcctgattac gccgctcgtc ctctccagcg tcagcctgtt
     3481 tttcatcggc atggcatttg cctacttttt ggttttcccc gtcattttca aattccttgc
     3541 cagcgttacc cctgtcggtg tcaatatggc gacagacatc gacaaatacc tctccttcat
     3601 cttggggatg tttgtcgcat tcggtacaac gtttgaagtc cccattgtcg ttatcctgtt
     3661 aaccaaaatt ggtgtggtaa caaccggaca gcttaaacat gcccgtccct atgttattgt
     3721 cggtgctttt gtcattgccg cagtcatcac accgcccgac gttatttcac aaaccctgct
     3781 tgccattcca ctgattctct tatacgaagc aggtatttgg ttcggacgct tcttcactcc
     3841 acgttcagaa caggatggcg acatacggcc gcctgcaaaa acctgacact atgccgtctg
     3901 aagccccgcc tcataccgcc acagattaag gaataccttt gaataccctc tatttaggtt
     3961 caaacagccc acgcagaatg gaaatcctga cgcagttggg ctatcgggtc gtcaagctgc
     4021 ctgccgacat cgacgaaacg gtcagacaga acgaagaccc tgcccgttac gttcaaagga
     4081 tggcagaaga aaaaaaccga accgccctga ccctcttttg cgaaaccaac ggcacaatgc
     4141 ccgatttccc cctgattacc gccgacacct gcgtcgtttc agacggcatc atattgggca
     4201 aaccccactc ccaagccgaa gcaatcgaat ttttaaaccg attgtccggc aaacaacata
     4261 ccgtcctgac tgccgtctgc attcattatc gcggcaatgc ggaaaaccgc gtccaaacca
     4321 accgcgtcgt tttcaagccc ctgagttcgg aagaaatttc cgcctatgtg caaagcggcg
     4381 aaccgatgga caaagccggt gcctacgccg tacaaggcat aggcggcatc tttatccaat
     4441 ctatcggagg cagcttcagc ggcattatgg ggctgcccgt ttatgaaacc gtttcgatgt
     4501 tgcaggattt gggataccgt accccacctt tcatccgagc ctaacccgta aagaccgccg
     4561 tgaacagaca aaccgcttac ctccttacct ctttcagcct gatcgcactg ataatcctgt
     4621 ccctttcctg ggaactgtgg attgcaccgt tacgcccggg cggctcgtgg ctcgcgctca
     4681 aagccctccc cctctgtctg ccgctttcag gcatcttgaa aaagaaaatc tatacctacc
     4741 aatacagctc catgctggtt ctgatttatt ttgccgaagc cgtcatgcgc ctgttcgacg
     4801 cctatccggc agaacaaatt tgcgccgcgc tttccgcagt attcagcatc atcttcttca
     4861 tatcctgcct gtcgttcgtc aaacaataca aggaaacaaa caatgcccgc tgaaacgacc
     4921 gtatccggcg cgcaccccgc cgccaaactg ccgatttaca tcctgccctg cttcctttgg
     4981 ataggcatcg tcccctttac cttcgcgctc aaactgaaac cgtcgcccga cttttaccac
     5041 gatgccgccg ccgcagccgg actgattgtc ctgttgttcc tcacggcagg aaaaaaactg
     5101 tttgatgtca aaatcccacc tatcagcttc cttctgtttg caatggcggc gttttggtat
     5161 cttcaggcac gcctgatgaa cctgatttac cccggtatga acgacatcgt ctcttggatt
     5221 ttcatcttgc tcgccgtcag cgcgtgggcc tgcaagagtt tggtcgcaca cttcggacaa
     5281 gaacgcatcg tgaccctgtt tgcctggtcg ctgcttatcg gctccctgct tcaatcctgc
     5341 atcgtcgtca tccagtttgc cggctgggaa gacacccccc tgctttaaaa catcatcgtt
     5401 tacagcgggc aaggcgtaat cggacacatc gggcagcgca acaacctcgg acactacctc
     5461 atgtggggca tactcgccgc cgcctacctc aacggacaac gaaaaatccc cgccgccctc
     5521 ggcgcaatct gcctgattat gcagaccgcc gttttaggtt tggtcaattc gcgcaccatc
     5581 ttgacctaca tagccgccat cgccctcatc cttcccttct ggtatttccg ttcggacaaa
     5641 tccaacaggc ggacgatgct cggcatagcc gcagccgtat tccttaccgc gctgttccaa
     5701 ttttccatga acaccattct ggaaaccttt actggcatcc gctacgaaac tgccgtcgaa
     5761 cgcgtcgcca acggcggttt cacagacttg ccgcgccaaa tcgaatggaa taaagccctt
     5821 gccgccttcc agtccgcccc gatattcggg cacggctgga acagttttgc ccaacaaacc
     5881 ttcctcatca atgccgaaca gcacaacata cacgacaacc tcctcagcaa cttgttcacc
     5941 cattcccaca acatcgtcct ccaactcctt gcagagatgg gaatcagcgg cacgcttctg
     6001 gttgccgcaa ccctgctgac gggcattgcc gggctgctga aacgccccct gacccctgca
     6061 tcgcttttcc tgatctgcac gcttgccgtc agtatgtgcc acagtatgct cgaatatcct
     6121 ttgtggtatg tctatttcct catccctttc ggactgatgc tcttcctgtc ccccgcagag
     6181 gcttcagacg gcatcgcctt caaaaaagcc gccaatctcg gcatactgac cgcctccgcc
     6241 gccatattcg caggattgtt gcacttggac tggacataca cccggctggt taacgccttt
     6301 tcccccgcca ctgacgacag tgccaaaacc ctcaaccgga aaatcaacga gttgcgctat
     6361 atttccgcaa acagtccgat gctgtccttt tatgccgact tctccctcgt aaacttcgcc
     6421 ctgccggaat accccgaaac ccagacttgg gcggaagaag caaccctcaa atcactaaaa
     6481 taccgccccc actccgccac ctaccgcatc gccctctacc tgatgcggca aggcaaagtt
     6541 gcagaagcaa aacaatggat gcgggcgaca cagtcctatt acccctacct gatgccccga
     6601 tacgccgacg aaatccgcaa actgcccgta tgggcgccgc tgctacccga actgctcaaa
     6661 gactgcaaag ccttcgccgc cgcgcccggt catccggaag caaaaccctg caaatgaccc
     6721 gcgccggcgg atgcggatac cgcccgaaat gtaaagctcc atgcaagaca ttgcaaaaaa
     6781 cagcaaaccg gtagggaaat acgctatcaa aaaacattgc agccgtgtta agataaaccg
     6841 tcaaacaatc ttttcacgcc ccgcccgaaa cagggtcggg gcataccctt acgaaaagga
     6901 aacaccatga gccgcgtatt actcgtagat gacgatgccc tgctaaccga actgctgacc
     6961 gaatacctga gcgccgaagg tctgaacgtc cgcagcgttc ccgacgggga agcaggcgta
     7021 caggaaatcc tgagcgggca gtacgatgta gtcgtattgg attccatgat gcccaaaatg
     7081 aacggcttgg atgtcttgaa aaacgtacgc gcccgaagca ccgtccccat catcatgctg
     7141 accgccaaag gcgacgacat cgaccgaatc atcggcttgg aaatgggcgc ggacgactat
     7201 gtccccaaac cctgcacacc acgcgaactc ttggcacgca tcaatgccat cctgcgccgc
     7261 gcacaacaca gcggcgaaca gaacaacgca cccaacagca tctccgtcag cgatgtcgtc
     7321 ctgtatcccg ccaaacgcca ggcatccgtc aaagacatgc cgctcgaact gaccagcacc
     7381 gaattcaacc tgctcgaagt cctgatgcgc catgccggac aggtagtcag caaagaaacc
     7441 ctgtccgtcg aagcactcga ccgcaagctg gcaaaattcg accgcagtat cgacgtacac
     7501 atctccagca tccgccacaa gttgggcgat gcctctctga ttcaaaccgt acgcggcttg
     7561 ggctacctgt ttgtcaaaaa ctgaaataaa cagataaatg aaactgttcc aacgcatctt
     7621 cgccacattt tgcgcggtta tcgtctgtgc aatctttgtg gcgagttttt ctttctggct
     7681 ggtgcagaac acccttgccg aaaaccagtt caaccaacgc cgcaccatcg aaaccacttt
     7741 gatgggcagc atcatttccg cattccgggc acgcggggac gcgggtgcgc gcgaaatcct
     7801 gacggaatgg aaagacagcc ccgtctcatc gggcgtgtac gttatacagg gcgacgagaa
     7861 aaaagatatc ctgaaccggt atatcgacag ctataccatc gaacgcgccc ggcttttcgc
     7921 cgccggacac ccgcattcca acctcgtcca tatcgaatac gaccgcttcg gcgaagaata
     7981 cctgttcttc accaaagact gggacaaact ccaagcccgc cgcctgccca gccccctgtt
     8041 gatccccggc ctgccgctcg ccccgatttg gcacgaactc atcatattgt ccttcatcat
     8101 catcgtcgga ctgctgatgg cgtacatcct cgccggcaac attgccaaac ccatcagaat
     8161 cttaggcaac ggcatggaca gggtggcaaa cggagaactt gaaacccgta tctcccaaca
     8221 ggtcgacgac cgcgacgacg aattgtccca tcttgccatc caattcgaca aaatggtgga
     8281 aaaactcgaa aaactcgttg ccaaagaacg ccacctgctc catcacgtct cccatgaaat
     8341 gcgttctccc cttgcgcgca tgcaggcaat tgtcggactg attcaggcgc agccccaaaa
     8401 acaggagcaa tatctcaaac ggctggaagg cgaactgacc cgcatggata cgctggccgg
     8461 ggaactgtta accctgtccc gtctcgaaac ttccaatatg gctttggaaa aagaaagcct
     8521 gaaactcctg cccttcctgg gcaacctggt agaagacaat caaagcattg cccagaaaaa
     8581 cggacaaacg gttaccctgt ctgccgacgg aaaaatcccc gaaaacacaa ccatccttgc
     8641 caacgaaagc tacctgtacc gcgccttcga caacgtcatc cgcaacgccg tcaactacag
     8701 tcccgaaggc agcaccatcc tgatcaacat cggacaagac cacaaacact ggataatcga
     8761 cgttaccgac aacggccccg gcgtggacga aatgcagctc ccgcacatct tcaccgcttt
     8821 ctaccgtgca gactccagtg ccaacaaacc cggaacagga ctggggcttg cattgaccca
     8881 acatattatt gaacagcact gcggcaaaat catcgccgaa aacatcaaac cgaacggtct
     8941 gcggatgcgc tttatcctgc ccaagaaaaa aaccggttcc aaaacagaaa aaagtgcgaa
     9001 ctgaccataa taccgtctga accggcttca gacggcattg cacaaacagt taccccaaaa
     9061 caaacacaca gcgggtgcat ctccaaaaat cacgcacata ccgtccgcaa aggaatatat
     9121 catgtcggca caaaccgatc cgggctactt tttcatgccc aaccacatta ttctgatagg
     9181 cgcgagcgaa cgtccgtaca gcctgggcga acgcgtactc agcaacctgc tgagtacgcc
     9241 ctttcaagga aaaatcaccc ccgtaaaccc gcgccaccac accatagccg ggcttcccgc
     9301 ctacaccagc ctcaacaaaa tccccggcaa tgcagacctg attattgccg ttaccctacc
     9361 cgacagttac gacaccctct tcaaaacctg ccgcaaaaag cagctccgac acatcatcct
     9421 catacaggac tgggacagcc tgtctgccgc agaactgcac accgccgaaa ctgccatccg
     9481 caaacaccac ggcaacggac tcaacatcac cgcctgcacc accgcaggca tccaactgcc
     9541 ctcactcgga cttaacatca gtacccaaga cggatacgcc gcaggccata ccgccatact
     9601 gaccggcaat gccgccgtca gccgccaaat cgacaacatc ctgaacaaac tccgtcaagg
     9661 cacatcccgc cacatcagcc tgcatcccgg catcagcccc atcacatccg ccgattggct
     9721 caaccgcttc ggacacagcc tgcacaccaa aaccgccgtc ctacaccaca accctgaaga
     9781 agaccagcgc aaactgttca gcgcaatccg ccaatttacc cgccatacgc cgctgattct
     9841 ccacatcacc tgccgcacga cagaaaccga ccgtgccgta ctgcactgcc tcgcccgaca
     9901 ctgcaacttc ctcatcagtt tcaacgccga cgacctcgaa gccgcactgc gcgcccaact
     9961 gtccgacctt ccacccctgt cccgactcga catcctgtcc gacacgcctg ccgaatggct
    10021 gaacgcgcac gcgccaaaaa ccctcgccct ccactttccc aaccttcccc accacatccg
    10081 caacggacac ctgaccggca cacccacacc ctcaatctgc cacgacatcg cctcacgtca
    10141 gcttgcccgc cccgacaccc aagccgtcct gaccatcctc agtccctccg gacacgagga
    10201 ttacaaaaaa acagcacgcg cccttatccg cctgtccgaa cagaccgcca aacccctgct
    10261 cgtcagcagc cccttttcag acggcataac ccatttcgac acccccactc aggcaatccg
    10321 caccctttcc taccgcaaca ccgccgccgc cctgaaacag gcacagctcg acattgcacc
    10381 gccgcagcca tgccgtctga aaacaccgca accccaaaac atcaaaaaag cccttgcagc
    10441 ggcaaatccc tccctgctcg ccgaagccct gcacctcccc ccctaccggc acactaccca
    10501 taacgccgtc caattccaat tcggcagcca ccccatttac ggcaatattc tgaccgtacg
    10561 gtacgcaggg caaaccacgg ccgcccttcc cccgtttacc acacaggaca gcctccatat
    10621 cgcccagttt gccgaattgg aagacccgca aacccttaac cagttccttc acatactgac
    10681 caccctttcc gaccacaacc tgcacatcgg caaaatcacc ctcaacctaa acggcggaca
    10741 atacagcagc gatttcatct taaagacacc cgaaacacac gacacgccca aacgcaagaa
    10801 cacaggcaaa gccgcccaaa ccctcgaaca tgccgccgca aaaatgcaga gtgccgccgc
    10861 atacctgaaa cacaaaaacc cgacagccgc cgaatttctc cgccacacaa gcgaagccgc
    10921 cgcagaactg ctcggcagca aaaccgaaac cggagcagcc gtacccaacg tacttgcccc
    10981 ctatcccgca gcacacctca aaacactgtc cctaaaaaac aacacgaccg ttaccattac
    11041 cccccttttg cccgaagacg cagaagccaa acagcagttc gtccgcagcc tcagccccga
    11101 agcacggtac acacgcttca tgacccacac caacgaactg cccgcagcca cgttggcacg
    11161 cctgtgcaac cccgactacc actgtgaagc cgcatggacg gcaagggatg ccgacagcaa
    11221 catcgtcgcc gtcgtccgcc acagccgcct gaaccgcaac gaatgcgaat tcggcatcac
    11281 actggcggaa catatgcgcg gcagcggact ggcacagaaa atgatggaac tcatcatcca
    11341 aaccgccgca cagcaaggct accggactat gagtgccgac attctcaaaa ccaatactcc
    11401 catgatcaaa cttgctgaaa aatcaggatt taccctcaag gaatcggaca ccgaaaaaaa
    11461 cctgtaccgc gcatatctga accttgcggc agacaaaaca acagaaaaaa caaataaaaa
    11521 cttgcacacc gaccacaaaa taacctaaaa tcggcaattt ccatatatcc gattttctca
    11581 aaaggactca aaatggtagt tatccgtttg gcacgcggcg gctcgaaaca ccgccccttc
    11641 tacaacgtca tcgttactga ctcacgcagc cgccgcgacg gccgcttcat cgaacgcgta
    11701 ggcttctaca accccgtagc caacgaaaaa caagagcgcg tccgcctcaa tgcagaccgc
    11761 ctgaaccact ggattgcaca aggcgcgcaa gtcagcgact ccgttgcaaa actgattaaa
    11821 gaacaaaaag ccgcctaatc cgcgtttgcc gccatgacag acactcaaaa ccgggtagcc
    11881 atgggctaca tcaaaggcgt attcggcata aaaggctggt tgaaaattgc cgccaacacc
    11941 gaatattccg acagcctttt ggactacccc gagtggcatt tggtcaagga cggcaaaacc
    12001 atcagcgtta cccttgaagc cggaaaagtc gtcaacagcg aactccaagt caaattcgaa
    12061 ggcataaacg accgcgactt ggcattctca ttgcacggtt acaccatcga aataccccgt
    12121 gaagcattcg ccccgacaga agaagacgaa tactactgga cagacttggt cggcatgacc
    12181 gtcgtcaaca aagaccatac cgttttaggc aaggtaagca acctgatgga aaccggcgca
    12241 aacgacgtat tgatgattga cggagaacac gggcagattc tgattccgtt cgtttcccaa
    12301 tatatcgaaa ccgtcgatac cggcagcaag attattactg ccgactgggg tttggactac
    12361 tgatgcttat ccaggcagtt accattttcc ccgaaatgtt cgacagcatt acccgctacg
    12421 gcgtaacggg acgcgcgaac agacagggaa tctggcagtt tgaagcagtc aatccccgaa
    12481 agtttgccga caacagattg agctacatcg acgaccgccc gttcggcggc ggcccgggaa
    12541 tgattatgat ggctccgccg cttcatgcag caatagaaca cgccaaagca caatcttccc
    12601 aaaccgcaaa agtcatctac ctcagccccc aaggaaaacc gctgacacac caaaaagcgg
    12661 cagaactggc agaacttccg catctgattc tgctgtgcgg acgctatgag ggaatagacg
    12721 aaagactgct gcaaaccagc gtcgatgaag aaatcagcat cggagacttc gttgtttccg
    12781 gcggagagct tcccgccatg atgctgatgg atgcagtatt gaggctcgta cccggcgtat
    12841 tgggcgatat gcagtctgcc gaacaggatt cgttctcaag cggcattttg gactgccccc
    12901 actacaccaa acccttagaa tttcaaggta tggctgttcc ggaagtattg cgttccggca
    12961 atcatggctt gatagcggaa tggcggttgg aacaatcgct gcgccgcacc ctggagcgca
    13021 gacccgactt attggaaaag cgcagtttaa tcccaaagga atcccgcctc ttggaaacca
    13081 tccggcaaga gcaacgggaa atccaatcat aatttaggaa aaaaacaatg aacctgattc
    13141 aacagctcga gcaagaagaa attgtccgcc tgaacaaaga aattcccgaa ttcgcaccgg
    13201 gcgacaccgt agtcgtatcc gtacgcgtcg tggaaggtac ccgcagccgt ctgcaagcct
    13261 acgaaggcgt tgtcattgca cgccgcaacc gtggtctgaa cagcaacttc atcgtccgca
    13321 aaatctccag cggcgaaggt gttgaacgta ctttccaact gtactctccg accgtcgaaa
    13381 aaatcgaagt caaacgccgt ggtgacgtac gccgtgccaa actgtactac ctgcgcggcc
    13441 tgaccggcaa agctgcacgc atcaaagaaa aactgcctgc acgcaaaggt tgattcaaac
    13501 ccgttttccc caatgccgtc tgaaccttct gacggcattt cttattgccg caacatccgc
    13561 aacggaacag caccaagaag cacacccctt ccggcacatc ccgaatcccc gtccgaaccg
    13621 aacaaaattt acagaccaaa cgttatacag tatcatatca gccatataat aataaccgct
    13681 ttaccgcttt ccctttcaaa accgcaaatc atcatgacac cttccctttt actatcagga
    13741 ttgaccttcc gcctcgtcct tgccctgatt gccgtatccc ttttatgggg cgtttacttt
    13801 tgggcagtat ccgcatgagc atcattgtcg aaaacctgac cgtcagctac cgccgccgtc
    13861 ctgccgtaca ccacgttgac attacttttg aagaacatag tatgtgggcg gttttcggtc
    13921 ccaacggcgc agggaaatcc acctttctca aatccttgat gggattgcag cctatcgata
    13981 caggcagcat ccggctggat ggattgagcc gccaagacat cgcctacctt ccccagcagt
    14041 ccgatatcga ccgctcccaa cctatgactg ttttcgactt ggcggcaatg gggctttggt
    14101 atgaaatcgg ctttttcaaa gggataaata ccgctcaaaa acaacgcgtt cacgaagcct
    14161 tggagcgtgt aggaatgcgg cagtttgcac gccgccaaat cgcccacctc tcaaacggac
    14221 aattccaacg cgtccttttt gcccgaatgc tggttcaaaa tgcaaaattc ctgcttttgg
    14281 acgaaccttt caacgccgtt gatgcacgga cgacctacga acttctcgac gtattgcaga
    14341 aatgccattg cggcggacac gctatcattg ccgtactgca cgattacgaa caagtccgtg
    14401 cctactttcc cagtaccctg ctgctcgccc gagaaaaaat tgcggcaggc gcaaccgaga
    14461 ccattctgac agaaccctac ctcgcccaag ccaacgccaa aatgcagcaa caggaaagcc
    14521 ccgactggtg cgcctcataa atactgcccg aaaccacgcc ccacaccaga caccatgaat
    14581 ctctacgacc tgctccttgc cccctttgca gaattcgact ttatgcgcta cgccctcgca
    14641 tccgtcttct gcctgtccct cagtgccgca cccgtcggcg tattcctcgt catgcgccgt
    14701 atgagcctga taggcgacgc attgagccac gccgtcctgc ccggtgccgc cgtcggctac
    14761 atgtttgccg gcttgagcct gcccgccatg ggtttgggcg gcgtagccgc aggcatgctg
    14821 atggcactgc ttgccggact cgtcagccgc ttcaccaccc tgaaagaaga tgccaacttt
    14881 gctgcctttt atctcagcag cctcgccatc ggcgtagtcc tcgtcagcaa aaacgggagc
    14941 agcgtcgatt tgctccacct ccttttcggc tctgtacttg ccgtcgatat tcctgccctg
    15001 cagctcatcg ccgccgtctc cagcctcacg ctcattaccc ttgccgtcat ctaccgcccg
    15061 ctcgtactcg aaagcatcga ccccctgttt ctcaaatccg tcggcggcaa aggcgggctt
    15121 tggcacgtcc tctttctcgt cctggtcgtc atgaacctcg tatccggctt tcaagccctc
    15181 ggcacactca tgtccgtcgg actcatgatg ctgccagcca ttaccgcccg cctgtgggcg
    15241 aagcacatgg gcgcactcat cctcctatcc gttctgacag ccctgctgtg cggcttgagc
    15301 ggactgctca tttcctacca catcgaaatt ccctccggtc ccgccatcat cctctgttgc
    15361 agcgtccttt atctcttttc cgtcatactc ggcaaagaag gcggcattct gaccaaatgg
    15421 ctcaaaaacc accgccacca caccacctga ccccgcaagc cgcttgaaca aacaggcagc
    15481 ttgttttacc ataacagatg ttacgttata tcacaggaga acagttatga aacacctcaa
    15541 actcaccctt attgccgcat tgctaaccac cgccgcaact gccgcccccc tgccggttgt
    15601 aaccagcttc agcattttag gcgacgtagc caaacaaatc ggcggagagc gcgtatccat
    15661 acaaagtttg gtcggagcca accaagatac gcacgcctat catatgacca gtggcgacat
    15721 taaaaaaatc cgcagtgcaa aactcgtcct gctcaacggc ttaggacttg aagctgccga
    15781 tgtacaacgt gccgtcaaac agagcaaagt atcctatgcc gaagcgacca aaggcatcca
    15841 acccctcaaa gccgaagaag aaggcggaca ccatcacgac cacgatcatg accacgaagg
    15901 acaccaccat gaccacggcg aatatgaccc ccacgtctgg aacgaccccg tccttatgtc
    15961 cgcctatgcc caaaacgttg ccgaagccct gataaaggcc gatcccgaag gcaaagttta
    16021 ttatcaacaa cgcttgggca actaccaaat gcagcttaaa aaactgcaca gcgacgcaca
    16081 agccgcattt aacgccgtcc ctgccgccaa acgcaaagtc ctgaccgggc acgatgcctt
    16141 ttcctatatg ggcaaacgtt accatatcga attcatcgcc ccgcaaggcg tgagcagcga
    16201 agccgagcct tcagccaaac aagtcgccgc catcatccgc caaatcaaac gcgaaggcat
    16261 caaagccgta tttaccgaaa acatcaaaga cacccgcatg gttgaccgta tcgccaaaga
    16321 aaccggtgtc aacgtcagcg gcaaactgta ttccgacgca ctcggcaacg cgcccgcaga
    16381 cacctacatc ggaatgtacc gccacaacat caaagccttg accaacgcga tgaagcaata
    16441 aaaccgtttg attggtttga atttgaaaag gcaaaaggcc gtctga
//
LOCUS       DBBZXW010000034        16485 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.034, whole genome shotgun sequence.
ACCESSION   DBBZXW010000034 DBBZXW010000000
VERSION     DBBZXW010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.034"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..110)
                     /locus_tag="ACJJD2_001011"
     CDS             complement(<1..110)
                     /locus_tag="ACJJD2_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG7579568.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILA"
     gene            complement(198..2303)
                     /gene="fusA"
                     /locus_tag="ACJJD2_001012"
     CDS             complement(198..2303)
                     /gene="fusA"
                     /locus_tag="ACJJD2_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HGG7579569.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            complement(2322..2792)
                     /gene="rpsG"
                     /locus_tag="ACJJD2_001013"
     CDS             complement(2322..2792)
                     /gene="rpsG"
                     /locus_tag="ACJJD2_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HGG7579570.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            complement(2910..3281)
                     /gene="rpsL"
                     /locus_tag="ACJJD2_001014"
     CDS             complement(2910..3281)
                     /gene="rpsL"
                     /locus_tag="ACJJD2_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HGG7579571.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            complement(3460..3609)
                     /locus_tag="ACJJD2_001015"
     CDS             complement(3460..3609)
                     /locus_tag="ACJJD2_001015"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7579572.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            complement(3606..3863)
                     /locus_tag="ACJJD2_001016"
     CDS             complement(3606..3863)
                     /locus_tag="ACJJD2_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579573.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRIGMPINIG"
     gene            complement(4155..8330)
                     /gene="rpoC"
                     /locus_tag="ACJJD2_001017"
     CDS             complement(4155..8330)
                     /gene="rpoC"
                     /locus_tag="ACJJD2_001017"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HGG7579574.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQE
                     VEQETAETQVTDE"
     gene            complement(8487..12665)
                     /gene="rpoB"
                     /locus_tag="ACJJD2_001018"
     CDS             complement(8487..12665)
                     /gene="rpoB"
                     /locus_tag="ACJJD2_001018"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HGG7579575.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YGNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAAEKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTKEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            complement(12855..13226)
                     /gene="rplL"
                     /locus_tag="ACJJD2_001019"
     CDS             complement(12855..13226)
                     /gene="rplL"
                     /locus_tag="ACJJD2_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HGG7579576.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            complement(13284..13784)
                     /gene="rplJ"
                     /locus_tag="ACJJD2_001020"
     CDS             complement(13284..13784)
                     /gene="rplJ"
                     /locus_tag="ACJJD2_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HGG7579577.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            complement(14014..14709)
                     /gene="rplA"
                     /locus_tag="ACJJD2_001021"
     CDS             complement(14014..14709)
                     /gene="rplA"
                     /locus_tag="ACJJD2_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HGG7579578.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            complement(14709..15143)
                     /gene="rplK"
                     /locus_tag="ACJJD2_001022"
     CDS             complement(14709..15143)
                     /gene="rplK"
                     /locus_tag="ACJJD2_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HGG7579579.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            complement(15244..15780)
                     /gene="nusG"
                     /locus_tag="ACJJD2_001023"
     CDS             complement(15244..15780)
                     /gene="nusG"
                     /locus_tag="ACJJD2_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HGG7579580.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            complement(15782..16060)
                     /gene="secE"
                     /locus_tag="ACJJD2_001024"
     CDS             complement(15782..16060)
                     /gene="secE"
                     /locus_tag="ACJJD2_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HGG7579581.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            complement(16176..16251)
                     /locus_tag="ACJJD2_001025"
     tRNA            complement(16176..16251)
                     /locus_tag="ACJJD2_001025"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16216..16218),aa:Trp,seq:cca)
     gene            complement(16258..>16485)
                     /locus_tag="ACJJD2_001026"
     CDS             complement(16258..>16485)
                     /locus_tag="ACJJD2_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HGG7579582.1"
                     /translation="HTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVEL
                     IAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
BASE COUNT         4163 a         4270 c         3667 g         4385 t
ORIGIN      
        1 gccaaaatag tagtcaaagc ggcagtcagg gtggttttac catggtcaac gtgaccgatg
       61 gtgccaacgt ttacgtgcgg tttgctacgt tcgaattttt ccttagccat gagctaattc
      121 ctttacatta aagatcgatt aaagaacaat gccgtctgaa aaatcatttc agcctttcgg
      181 acggcctatt tgcctgatta gcctttacgg gcttcagtta cagcagcagc tatgtgagca
      241 ggagcttcag aatatttctt gaactccata gagtaagtag cgcggccttg ggttgcagaa
      301 cgcaggtcgg tcgaataacc gaacatttct gccagaggta cttcggcacg gactttttta
      361 ccgccgatac cgtcatcatc catacccaat acaacaccgc gacggcggtt caagtcgccc
      421 attacgtcgc ccatgtattc ttccggagtt tccacttcaa ctgccataat cggctcaagc
      481 agggcaggag atgcttgacg cataccttct ttaaacgctt gagaagcggc caattcaaat
      541 gccaattggg aagagtcgac atcatggtaa gaaccgaata ccagacggat acgtacatca
      601 actacaggat agccggcaac gataccgtta ggcaatgtat cgcggatacc tttatcgaca
      661 gacggaatga attcgcgagg aatcacgcca cctttaattt catcgataaa ctcgtaacct
      721 tcgccccccg gttccatagg ttccatttca atcacaacgt gaccatattg acctttacca
      781 ccggattgtt tcgcgtgttt gtattcagct ttaacggctt tgcggatagt ttcacggtaa
      841 gccacttgag gtgcaccgat atttgcttcc acaccgaatt cgcgtttcat acggtcaaca
      901 ataatttcca agtgcagctc acccataccg gaaataatgg tttgaccgga ttcttcgtct
      961 gtacggacac ggaaagaagg gtcttcttta gccaagcggt tcagggcgat acccattttc
     1021 tcttggtcgg ctttggtttt cggctcaacg gcaatatgga ttaccggctc ggggaattcc
     1081 atacgttcca agataatcgg cgcgctttcc gcacacaagg tttcaccggt agtaacgtct
     1141 ttcagaccaa tagcggctgc gatgtcgccg gcgcgtactt cttcgatttc agtacggtct
     1201 gcggcagtca tttgtaccaa acgaccgata cgttcgcgag tgccttttac ggagttcaat
     1261 acggtatcgc cggattttac tacgcctgag taaacgcgga taaaggtcag ctgaccgacg
     1321 tatttgtcgt tcaacatttt gaacgccaat gcagagaatt tctcttcatc gctggcttga
     1381 cggctgtcgg cttcctcggt attcgggttg acaccttgaa ccggaggaat atcggtagga
     1441 gctggcagca attctacaac tgcgtccaac atacgttgaa cacctttgtt tttaaatgca
     1501 gaaccacaca gcataggctg aatttcgcct gccaaagtac gttgacgcaa cgcgcctacg
     1561 atttcttctt cggtcagctc gtcgccgcct aagtatttgt ccatcagttc ttcgctggct
     1621 tcggctgcgg cttcaatcat attttgacgc cattcttcgg cagtttcgac caattcggca
     1681 ggaatatcgc cataggtaaa ggttgtacct ttatcggctt cattccaaat gatggatttc
     1741 attttcaaca aatcaaccac accgctgaag ttgtcttccg caccaaccgg aatgacgata
     1801 ggtacagggt ttgcgcgcaa acgggttttc atttgctcga caacgcggaa gaagttggca
     1861 ccctgacggt ccattttatt gacaaacgcc aagcgcggca cttggtattt gttggcttgc
     1921 cgccatacgg tttcagattg gggttgaaca ccgcccaccg cgcagtaaac cattaccgcg
     1981 ccgtccaata cacgcataga acgctctacc tctacggtaa agtcaacgtg tcccggggtg
     2041 tcgatgatgt tgaagcggtg ctcggggaat tgtttcgcca taccggacca gtaggaagta
     2101 acggcagcgg aggtaatggt aataccgcgc tcttgctctt gttccatgta gtcggtagta
     2161 gccgcaccgt catgcacttc gcccagcttg tgggtcaaac cggtatagaa caaaatacgt
     2221 tctgtcgtcg tggttttacc cgcatcgata tgggcggaaa taccgatgtt acggtacagg
     2281 ctgatcgggg tcttacgagc cattttatta gcctttcaaa attagaaacg gaagtgagag
     2341 aatgctttgt tggcttcagc catacggtgt acttcttcac gttttttcaa cgcaccgcca
     2401 cggccttcgg acgcatcaat caattcgcct gccaaacgca ggtccatgga tttctcacca
     2461 cgtttgcggg ccgcatcgcg aacccagcgc attgccaaag ccaaacggcg tgaaggacga
     2521 acttcaacag gaacttggta gtttgcacca cctacacggc ggcttttcac ttccacgata
     2581 ggtttggcgt ttgcaatggc ttcgttaaat acttcgattg ctactttgcc ggtttttttc
     2641 tcaatctgtt ccaacgcacc gtaaacgata cgctcggcaa cggatttttt accgtcaatc
     2701 atcaatacgt tcatgaattt ggtcaactcg acgctgccga atttaggatc tggcagtacg
     2761 tcgcgcttgg ggacttctct acgtcttggc attttaattt cctttaatct attcagtcgg
     2821 gtctattccc atgaataccc aattgagtat tcacttactc ggccgttgtt cagcttaggc
     2881 ggccgacgtg cctatttaag tcccagtaat tatttaggac gcttagcacc gtatttggaa
     2941 cgggcttgtt tacggtcttt aacgcctgca gtatccaaag aaccgcgtac agtgtggtaa
     3001 cgcacacctg gcaagtcttt tacacgaccg ccgcgaatca atacgacact gtgctcttgc
     3061 aggttgtgac cttcgccgcc gatgtatgaa atgacttcaa aaccgttggt caggcggact
     3121 ttacatactt tacgcaatgc agagttaggt tttttagggg tagtcgtgta tacacgggtg
     3181 cacacgccgc gtttttgcgg gcaggcttcc agtgcgggca ctttgtttac gtacacgggc
     3241 ttttgacggc ctttgcgtac caattggttg atagttggca tattttctcg tcctgttgag
     3301 ttaaatactt gccgacacca tgtcggcaag agtggaatta tatttttatt gcaagtatac
     3361 agtcaagcat aacgacaaga agaaagatga ttttcttgtt tgccgataaa tatttaccga
     3421 catccctcac aatcagtcgg acgactgaag aaaatactgt caatacgttt tttctatact
     3481 gacaaaccgt tccttgccgc tgcgcgaata aaaggcgggc atattgctgt tgatcttgtt
     3541 gtaacggaaa tttatttggg gtgtaaatcc tttccacgac agttttttat gccataaagc
     3601 cgcgctcatc cgatgttaat cggcattcct atccggtcac cccgaacatc gccgcctgcc
     3661 gcgcttttag gaacttcaga cggcattgca tcgcgaaccg gcggtacatc ctcggcaaac
     3721 ggcaggaggg cgaggctttc cccttcagac ggcatcgcaa tccgattacc gacgttaatc
     3781 agttcgacag gtacgccgat atcctcggca aacgtcgccg aagtcagcag gcagcctgca
     3841 aaaaagagat ttctgggttt catatttatt ttttaaagga aatgccgtct gaagtttcag
     3901 acgacatttg tttaaatgga aaacattaag acgctacttt ttttgaccgc cgaaaccaac
     3961 atccctagca aagttatttt ggtctccgga cgtaccgacg acacccgcca cctcgttggt
     4021 ctccggcccg aaaataccta aggaataatc cacacgcctc aaaatgacga aaacgcttgt
     4081 ttttgcctta atcagacaaa gaaaaaccgc aagcttaaag cttgcggttt tgtattgaat
     4141 aaacgcacca aagattattc atccgttact tgggtttcag cagtctcctg ttccacctct
     4201 tgccattgtt gatgacggct gcggtggtaa gtcaaaccgg taccggcagg aatcaggcgg
     4261 ccgacgatga cgttctcttt taaaccgcgc agttcgtctt gtttgcccat aatcgcggct
     4321 tcggtcagaa cacgggtcgt ttcttggaac gatgcggcag aaatgaaact gtcggtggac
     4381 agggaggctt tggtaatacc cagcaatacg ttttcgtaac gtgccggctc tttgccttct
     4441 tccaaagctt tttcattggc cgccatcaca tcgccgcgtt cgacctgctc tccggtaatg
     4501 aacccggttt cgccggcatc cgcaatgttc acacggcgca acatttgacg gatgatgact
     4561 tcgatgtgtt tatcagaaat cttcacacct tgcagacggt aaacctcttg cacctcttgg
     4621 acaatgtagc gtgccagtgc ttcgatacct tgcaaacgca gaatatcatg cggatcaaca
     4681 gctccgtcca cgatggtttc accgcggttt accacttgac cgtcgtgtac cagaatttgt
     4741 ttctctttgg aaatcaaggt ctcgtatgct acaccgtcca cgtcagtaac aatcagacgt
     4801 tgcttgcctt tggtctcttt gccgaaggaa acggtaccgg taatttccgc caacataccg
     4861 gcatctttcg gcacgcgtgc ttcaaacaat tcggcaacgc gcggcagacc accggtaatg
     4921 tcgcgggttt tggaagaggc ttgcgggata cgcgccaata cgtcgccttt accgatttcc
     4981 tgaccttcgc gtacggtaat caccgcacca acggggaatg ccatcgaaac cggagtggac
     5041 gtaccgggaa tacagatttc cacgccgttt tcatccaaca attttacagt cggacgcagc
     5101 agtttggacg cgctgctgga acggcgttta ccgtcaatca ccaccaaagt ggacaaaccg
     5161 gttacatcgt cagtttgttt cgcaacggta acaccctctt ccacgttctc aaatttcacc
     5221 atacctgcat gttcggtgat catcggacgg gtatgcggat cccaggttgc caaggtttga
     5281 ccggctttaa tggccatacc gtcttgtacc agcaggatgg caccgtaagg tactttgtgg
     5341 cgttcgcgtt cacggccgat atcgtcgtga atcacgactt cacaagaacg gccgatgaca
     5401 accaactcgc ctttattgtt ggcaacataa cgcatttggc tgctgaatcg tgccgtaccg
     5461 ttggatttgg cttccacttg gctggctgct gccgcacggg atgccgcacc accgatgtgg
     5521 aacgtacgca tagtcagctg ggtacccggt tcgccgattg attgggcggc aatcacacca
     5581 actgcctcac cggcattgac cagcttacca cgtgccaagt cgcgaccata acagtgcgcg
     5641 cacaaaccgt ggcgggtttt acaagtaatc ggcgtacgga ctttgacttc atcgacaccg
     5701 gattggtcaa tcatatccac cagtttttca gtcaacaacg taccggcttc aaccaaggtc
     5761 tcgccgcttg acggatcgac aacgtcagac gcagtaacac ggcccaaaat acgatcgcgc
     5821 aatgcttcaa tcacatcacc gccttgtacc actgccttca taacaaagcc gtctgaagta
     5881 ccgcaatcgt cttcaacaac gaccaaatct tgagttacgt ctaccagacg acgggtcagg
     5941 taaccggagt tcgcggtttt caatgcggta tccgccaaac ccttacgcgc accgtgggtc
     6001 gcaataaagt attgcaatac ggtcagacct tcgcggaagt ttgaggtaat cggcgtttca
     6061 ataatcgagc cgtcaggttt cgccatcaaa ccgcgcatac ctgacaactg tttaatctga
     6121 gccgcagaac cacgggcacc ggagtctgcc atcatataga tggagttgaa tgactcttga
     6181 tcgacttcgt tgccggcacg gtcgataact ttttgtttgg acaggttgtc catcatcgcc
     6241 ttagcgattt tatcgccggc acgaccccaa atatcgacca ccttgttgta gcgttcgccg
     6301 ttggtaacca aaccttgacg gtattggtct tcgatttctt taacctcggc attggcttca
     6361 gccagcaagg ccgctttttc ttttggaatt tccatatcgt caacggcaat ggaaataccg
     6421 ccttttgccg caaatccgaa accggtgtac atcaggtggt cagcaaagat aaccgtatcg
     6481 cgcaagccgc acaggcggaa cgatgcgtta atcagtttag aaatttcttt tttcttcaac
     6541 gctttgttga catattcaaa cggcaggcct ttcggcagga tttcgctcaa caatgcacgg
     6601 ccgacggttg tttcgtaacg gttaacgaca ggctcaaact cacctgcttc gtttttcacc
     6661 cattcgcgca gacgtacggt gatttttgta cccagctcga cctgtttggt atggtatgcg
     6721 cgatgcactt ctttcacatc ggcaaacagg ctgccttcgc ctttggcatt gatacggtcg
     6781 cgggtcatgt agtacagacc caatacgata tcttgggaag gtacaataat cggttcgccg
     6841 ttggcaggag acaatacgtt gtttgaagcc agcatcagcg tgcgtgcttc catttgtgct
     6901 tccaagctca atggaacgtg taccgccatt tggtcgccgt caaagtcggc gttgaacgcg
     6961 gcacacacca atgggtgcaa ctgaatcgct ttaccttcaa tcaagatagg ttcaaacgct
     7021 tgaataccca aacggtgcag ggtcggcgca cggttcagca taatcggatg ttcgcggatg
     7081 acttcttcca agatgtccca tacttccggt acttcttgct ctaccaattt tttcgctgct
     7141 ttaacggtgg aagccagacc ttgtttttcc aatttgtgga aaatgaacgg tttgaacagt
     7201 tccaaagcca tttttttcgg cagaccgcat tggtgcagac gcaggtatgg gcctacggta
     7261 atcacggaac ggccggagta gtccacacgt ttgcccaaca ggttttgacg gaagcgaccg
     7321 cctttacctt taatcatgtc tgccaatgat ttcagcgggc gtttgttggc gccggtcatg
     7381 gctttaccgc gacggccgtt atccaacagc gagtcaactg cttcttgcaa catacgtttt
     7441 tcgttgcgga cgatgatgtc gggcgcatgc agttccaaca gacgtttcag acggttgtta
     7501 cggttaataa cgcggcggta caaatcgttc aaatcggaag tggcaaaacg accaccatcc
     7561 aatggaacca acggacgcaa atcaggcggc aataccggca gcacatccat aatcatccat
     7621 tccagtttca taccggaacg atggaaggct tccaatactt tcaagcgttt ggcgattttt
     7681 ttgattttgg tgtcggaacc ggtcgattcc aactcttggc gcaggatttc gatttcgccc
     7741 gctacattca gggtacgcag caattcgcgg ataccttccg cacccatttt ggcatcgaaa
     7801 tcgtcgccgt attcgtccag cttgttgtag taatcgtctt cagtcagcaa ttggcggcgt
     7861 tgcagcggag tcataccggg atcggttacc acaaatgctt caaagtacaa tacgcgctcg
     7921 atgtcgcgca aagtcatgtc taacaccata cccaagcggg aaggcaggga ttttaagaac
     7981 caaatatgtg cgacgggcgc agccaattcg atatgaccca tgcgttcgcg gcgcactttg
     8041 gacagggtta cttccacgcc gcatttttca cacgttacgc ctttaaattt caagcgtttg
     8101 tattttccgc acaagcattc gtagtctttg accgggccaa agattttggc acagaacaaa
     8161 ccgtcacgct caggtttgaa cgtacggtag ttgatggttt caggtttttt gacttcgcca
     8221 taagaccatg agcggatggt ttcgggagag gcaataccga ttttaatggc atcaaactct
     8281 tcttccatgc cggcagtttg caacggatta aataagttca acaaattcat ttttgctcct
     8341 tgaaggaagt atttttaccg catggcggat tttcgatatt gggaaacggt acttttgatt
     8401 tcagacggcc taaatgccga ttgcttcatt cttattctga aaccactttt tcagacgacc
     8461 ctgaaaggcc gtctgaaaac ttttgtttag taacgttcca aatcgatatc caagcccagt
     8521 gagcgaatct ctttgaccaa tacgttgaag gactcgggca taccggcatc gattttgtgt
     8581 tcgcctttga cgatgttttc gtacattttg gtacggccgt tcacgtcgtc agacttcaca
     8641 gtcagcatct cttgcagcgt gtatgccgcg ccgtatgctt ccaatgccca aacctccatc
     8701 tcgccgaaac gttggccgcc gaactgggct ttaccgccca aaggctgctg ggtaaccaga
     8761 ctgtacggac cggtagaacg cgcgtgcatt ttttcgtcaa ccaagtggtg cagtttcaga
     8821 tagtgcatca cacctactgt aaccttgcgg tcaaatgctt cgcctgaacg gccgtcatac
     8881 agcgtgattt gggttttact gtcgttgaag cccagttttt caacctcagg atcgtcgctc
     8941 ggataagcca agttcagcat ttcgcggatt tcagactctt tcgcaccgtc gaatacagga
     9001 gaggcgaaag atgcaccttt gcgcaggttg gaggccagtt cgatgatttc ttcatcagtc
     9061 agggcatcca aatcttcttt cttaccgctg ccgttgtaga gtctgttcaa gaactcgcgc
     9121 aactcgcctg ctttgcgttg ctctttcagc atacggtcga tacgctcgcc gatacctttt
     9181 gctgcccaac ccaagtgaac ttccaaaatc tgaccgatgt tcatacggga aggtacgccc
     9241 aatgggttca gtacgatgtc taccggacgg ccgtccgcca tgtaaggcat gtcttccact
     9301 ggcagaatgc gcgataccac gcctttgtta ccgtggcggc ccgccatttt gtcgccggct
     9361 tgcagacggc gtttgatggc gataaaaact ttcaccattt tttgtacgcc gggttgcaat
     9421 tcgtcgcctt gggtcagttt tttcttcttg atttcgtata actcgtccgc ttcttcgcgt
     9481 ttttgttgca ggctcacttt aatcagttcc aactgcttgg ccaaatcttc atcggtcaga
     9541 cggatatcga accaatcgtg cctgctcggc agacccgcca aatattcggt agtaatttcg
     9601 ctgcctttag ccagcttcat cggaccacca ttggcttttt gacccacaat catacgttcg
     9661 atacggtcga atgcgtcgtt gtcgaaaata cgcaattggt cgttcaaatc caaacggtag
     9721 cgtttcaact cggaatcgat aatggattgg gcgcgtttgt cgcgttgaat accttcacga
     9781 gtgaagactt gaacgtcgat aaccgtaccg ctcataccgg taggcatacg caatgaagta
     9841 tcttttacgt cagacgcttt ttcgccgaag atggcgcgca acagtttttc ttccggcgtc
     9901 agctgggttt cgcctttagg cgttactttg cctaccaaca catcgccggc ttctacttct
     9961 gcaccgatgt aaacgatacc ggattcgtcc aagcggtttt gcatacgctc ggacaagttc
    10021 ggaatatcgc gggtaatgtc ttccgcaccc agcttggtat cgcgggcaac gacattcaat
    10081 tcctcaatgt gaatcgaagt gtaacgatca tccgcagcca ctttttctga aatcagaatc
    10141 gagtcttcat agttgtaacc gttccatggc atgaaggcga tggtcatgtt ttgacccaaa
    10201 gccaattcgc ccaagtcggt agacgcaccg tcggccacca agtcgccgcg ttgcaacacg
    10261 tcgcctgctt ttacggccgg acgttggttg atgttggtag attggttgga acgggtaaat
    10321 ttaaccaagt tgtaaatatc gacacccact tcgccggcag tcgcttcgtc gtcatggaca
    10381 cgaatcacaa cacggttggc atcgacatac tcgaccacgc cgcctcggcg ggcaacgatt
    10441 gcagtagcag agtcaacggc aacggaacgc tcgataccgg taccgaccat cggtttttca
    10501 ggacgcaagc aaggcactgc ctgacgttgc atattcgcac ccatcaatgc gcggttcgcg
    10561 tcatcgtgtt ccaagaacgg aatcagggat gctgcaacgg ataccacttg accagttgcc
    10621 acgtccatat attggacgcg gtcgggcgtt gccataatgg tttcgccttt ttcacgacag
    10681 gtaaccaaat cgccaatcag attgccatct gaatccaaat cggcattcgc ctgtgcaatc
    10741 acatagcggc cttcttcgat ggcagacaag taatcgattt ccttggttac tttgccgtcg
    10801 ataacgcggc ggtaaggcgt ttccaagaaa ccgtaatcat tggtgcgcgc ataaacggac
    10861 aatgagttga tcaaaccgat gttcggacct tcaggcgttt caatcggaca tacgcggccg
    10921 tagtgggtcg gatgcacgtc ccgtacctcg aagccggcac gttcgcgggt caaaccgccc
    10981 ggacccaatg cggatacgcg gcgtttatgg gttacttcag acaaggggtt ggtctgatcc
    11041 ataaactgac tcaattggct ggagccgaag aattctttaa tagcggcaga aacaggtttt
    11101 gcattaatca aatcgtgcgg catcaagttt tctgattccg cctgattcaa acgttctttt
    11161 acagcacgtt ccacacgggc caaaccgctg cggaattggt tttcagtcag ctcgcctacc
    11221 gaacgtactc ggcggttgcc caagtgatcg atatcgtcaa cttcaccatg gccgttacgc
    11281 aactcgacca aagtcgcaat cgaggcgaca atatcttcga cgctcaggac ataaccgcct
    11341 ttttcggcag caccggcaaa cgtttcgttc agcaggcggc cgtaccaaga gttttgttgg
    11401 gcttcggaca gtttttgttc gtatgtgcgc gtattaaatt tcatacggcc tacgcgggac
    11461 aaatcgtagc tgtcttcact gaagaacaag cggttaaaca attgctcgac cgcctcttcg
    11521 gtgggcggtt cgcccggacg catcatacgg taaatcgcaa cacgcgccgc ctgccggccg
    11581 gcagtctcat ccgtacgcaa ggtgttggag atataagcac cctgatccaa ctcattgatg
    11641 taaagggtcg taatttcttt tacgccgttg atatcaaatt tggccaacaa ctcttctgta
    11701 atttcatcat tggcagaagc caatacctcg ccggtttccg aatcaatcag atcggcagcc
    11761 aatgctttac ccagcaggct ttccggttct acatccaaac gggtcaggcc tgcattggta
    11821 atatcacgga tatttttcgc agtaatgcgc ttacctttgg caaccaatac attgccttct
    11881 ttatccaaga tatcgacctt ggcagtttcg cctttcagac ggcctgcgac caaatcggtt
    11941 tgaacaccgt ttgaagacaa atagaacgtt tctttgtcgt agaaaatatc caagatttgc
    12001 tcattgccgt agcccaaagc cttcaacaaa atcgttaccg gcattttacg gcggcggtcg
    12061 atacggaaat acagcaaatc tttcgggtca aattcaaaat ccaaccatga accgcggtag
    12121 ggaatgatac gggcggagaa taacaacttg ccggaagagt gcgtcttacc tttgtcatgc
    12181 tcgaagaata cgccgggcga acggtgcaac tgggagacaa tcacacgctc tgtgccgtta
    12241 atcacaaaag aaccgctcgg ggtcatcaac ggaatttcgc ccatatacac ttcgttttca
    12301 cgaacttctt ttaccgtcgg tttagatgct tccttatcca aaatcaccaa acggatacgc
    12361 gcgcgcaagg gggctgcata agtgattccg cgcaactgac attcgggaat atcgaacaaa
    12421 ggctcgccca atgtgtaatg cacaaactcc aatcgcgcat aaccgttatg gctcacaatc
    12481 gggaaaatag aattaaatgc cgcctgcaga ccgtcatcgg tacgtttgtc aaaagcattt
    12541 tccagctgca aaaacttcgc ataagaatca atttgggttg ctagcaagaa aggaacttcc
    12601 aaaacatttt cccgctttgc aaaactctta cggatacgtt ttttctcggt aaacgaatag
    12661 ttcatacaca ctccgaaaag taattttcaa taataggccg tctgaaacaa cggtacgcat
    12721 caatctgata tttacattta tttgcaatga cttgataaaa actatgcaaa taaatgtaaa
    12781 caatacttga tgtttatttt aagaagcaaa ataaggctgg cagaaaactg ccagccttca
    12841 taagaagcat caaattattt gatttcgact ttagcgcctg cttcttccag ttgtttttgg
    12901 atgtcttcgg cttcagcttt agaaacaccc tctttaatgg ttttaggtgc gccgtcaacg
    12961 atgtctttag cttctttcag acccaaaccg gtaattgcac ggacaacttt aatcacgccg
    13021 actttttgat caccggcaga agccaaaacg acatcaaatt cggttttttc ttcagcatcg
    13081 gcagcaccgg caccagcagg acctgcaact gcaacagcag cagcagaaac accgaatttt
    13141 tcttcaaaag ctttaaccaa gtcgttcaat tccattacgg tcaaagaacc aactgcttcc
    13201 aaaatgtctt ctttagtaat agccatgcta ttttactcca aatattgtat taaaaaataa
    13261 ttgattaaca gaaacaaaat cgattaagcg gcttcttcgc cggctttttt ctctgccaaa
    13321 gcagccaaac cgcgcgcaaa gcccgataca ggagcttgca taacgaacaa cagtttggac
    13381 aacagctctt cgcggctcgg aatagaagcc aactcagcaa cctgagcagc attcattact
    13441 tcgccattgt aagaaccggc tttaacgaca attttgtcat cttttttcgc gaattggtgc
    13501 aacactttag cagcagcaac agcatcttca gaagcagcgt aaaccaacgg accaaccatt
    13561 tgatcggcca attctgcaaa tgaagtacct tgcactgcac gacgagccaa agtatttttc
    13621 agaacacgca aataaacgcc ttctttacgt gcattcgcac gaagctcagt catactggaa
    13681 acactgatac cgcgatattc agcgactacg agggtttgag cgttagcaat tgccgcgcta
    13741 atttcctcga ccgccacttt cttggtttca atattgagac tcaaggtcta cctcccactg
    13801 tttataaaca ggataccaaa acgatatccc accagcgcgg taacctaaaa agacatctta
    13861 caagcaatct tgcaatgtgt ttcaggacta ccgtctgcgt agggcagtta cgattaaatc
    13921 ttacgatccc tacggtcttg gacatctact taattttaag tagcccaaat tcaagcagcc
    13981 cagaaaacca aactgcttga aaattcctta agattagtta tttacgcttg atgtatcaac
    14041 gcgaataccc aaacccatgg tgctagacac agcaactttt ttcagatact gacctttagc
    14101 ggcagcaggc ttggctttaa cgatagcatc cagcaacgca tcaaagttct ctttcaaatc
    14161 agcttcagcg aatgaagcac gaccaatcgt tgcatgaaca atacctgcct tgtcggtacg
    14221 gtactgcact tgacctgctt ttgcattttt tactgcttcg gcaacattag gggtaaccgt
    14281 acctacttta gggtttggca tcagaccacg aggacccaag atggtaccca attgaccaac
    14341 aatacgcatt gcatcgggag aagcaataac aacgtcaaag ttcagattgc ctgctttgat
    14401 ttcagcagcc aaatcttcga aaccgacgat atctgcacca gcttctttag cagcttctgc
    14461 atttgcacct tgagtaaata cagccacacg ggttatctta ccggtgcctt taggcagaac
    14521 gaccgaacca cggataactt ggtcagattt acgcggatca acgcccaagt tgaaagatac
    14581 gtcaacagac tcgtcaaatt tagcagtcgc tgcttttttt accaaagcaa ttgcttcatc
    14641 aattgcatat aatttattgg cttccacaga agagcgaaga gctttcaagc gtttagatac
    14701 tttagccatt atacaacacc ctccacatcc aagcccattg agcgagcaga acctgctata
    14761 gtacggacag ccgcatccaa gtcagcagca gtcaaatcag gatctttagt tttagcaatt
    14821 tcttccaact gggcacgggt caatttaccc actttgttgg tcagaggatt agaactacct
    14881 ttttgcaaac cggcagcctt tttcaacaag atagaagctg gcggggtttt catcacaaat
    14941 gtgaatgatt tatctgcaaa tgcagtaatc acaaccggaa tcggtaagcc aggctccata
    15001 ccttgggttg cagcattaaa tgccttacaa aattccataa tattcaaacc gcgctgaccc
    15061 aaagcaggac caaccggagg agatggattg gctttacctg caggaatttg cagtttaata
    15121 tagccgataa ttttctttgc cacttaacga actcctaaaa acgggtaaga cgcggaacca
    15181 tttccgctcc ccaagttaat ttttgattct atcctcttat tgcttttttt tcaagtataa
    15241 aaatcagtta atcttttcaa cctggctgaa ctccagctca acgggtgttt ctctaccaaa
    15301 tatctgaaca gacacgcgta acttattccg ttcataattg acctcctcaa ccaccccgtt
    15361 aaaatccgca aacggccctt catttacacg aacctgttga ccgacctcaa attcaacttt
    15421 tggtttcggc ttctctatgc cggtctgaac ctgctgtaaa ataatttcag cctctctctg
    15481 actaatcggc gtaggtctat tagccctccc tccaataaaa ccggaaacac ggggggtgct
    15541 ttttacaaga tgccaagagt catctgtcat ttccatctca actagcacat aaccaggata
    15601 tgactttctt tcactaatag tcttacgacc attgcggata tcaacaactt tctctacagg
    15661 caccagaatt tgtccgaaat aatctcccat ctcctcacgg gcaatgcgct cttccaatat
    15721 tcgttggaca ttcttctcaa accccgaata cgcctgtaca acataccatt ttttcgacat
    15781 ctcaaccttc ccttctcagc aatacatcaa aaaataacca cgaaattgct gtatctgccg
    15841 catagataaa tatagaaagc acagcaacaa acactataac aaatacagtc attctgacag
    15901 catcttcacg cttaggccaa accacctttt tgaattcgga ccaagaattt gagaaatatg
    15961 caaaaaaccc ttccttaccg gaattagatg cagattcttt atcttgaaca accagttgat
    16021 ccactttaac gttctttttt tcaggcgtat gttctgtcat attatttatc catcatagca
    16081 tctgtctatt ctcaatccat gtaaatggca agagagttta ctaaataaca aatacaaaaa
    16141 aaattaaccg gcacaaggcc ggttaatttt ttatttggca ggccaagagg gtctcgaacc
    16201 cccaaccctc ggttttggag accgatactc taccaattga gctattggcc tctaaactta
    16261 agcgataaca gaagaaacca cgccggcacc cacggtacgg ccgccttcgc gaatcgcaaa
    16321 gcgcaaacct tcttccatag cgataggcgc aatcagttct acggtgatgg ttacgttttc
    16381 acccggcatt accatttcca caccttcttc caaagtaacc gcgccggtta cgtcggtggt
    16441 acggaagtag aattgcggac ggtagttggc gaagaacggg gtatg
//
LOCUS       DBBZXW010000035        16112 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.035, whole genome shotgun sequence.
ACCESSION   DBBZXW010000035 DBBZXW010000000
VERSION     DBBZXW010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16112
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.035"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            153..389
                     /locus_tag="ACJJD2_001027"
     CDS             153..389
                     /locus_tag="ACJJD2_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579583.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSFVSVKRQEVENESRETAGE"
     gene            361..780
                     /locus_tag="ACJJD2_001028"
     CDS             361..780
                     /locus_tag="ACJJD2_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579584.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKAAFAKQQAVID
                     KMEHDKAQALLLSAQNYARELELARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            677..982
                     /locus_tag="ACJJD2_001029"
     CDS             677..982
                     /locus_tag="ACJJD2_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579585.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(1027..1197)
                     /locus_tag="ACJJD2_001030"
     CDS             complement(1027..1197)
                     /locus_tag="ACJJD2_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HGG7579586.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            1210..1428
                     /locus_tag="ACJJD2_001031"
     CDS             1210..1428
                     /locus_tag="ACJJD2_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579587.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            1425..1763
                     /locus_tag="ACJJD2_001032"
     CDS             1425..1763
                     /locus_tag="ACJJD2_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579588.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            1775..2041
                     /locus_tag="ACJJD2_001033"
     CDS             1775..2041
                     /locus_tag="ACJJD2_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579589.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKADAKADSTNIAAALERIENKLEKVNEKLDRKADKS"
     gene            2038..2235
                     /locus_tag="ACJJD2_001034"
     CDS             2038..2235
                     /locus_tag="ACJJD2_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579590.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            2238..2744
                     /locus_tag="ACJJD2_001035"
     CDS             2238..2744
                     /locus_tag="ACJJD2_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HGG7579591.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     AEVEKKFG"
     gene            complement(2741..3253)
                     /locus_tag="ACJJD2_001036"
     CDS             complement(2741..3253)
                     /locus_tag="ACJJD2_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579592.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDGY"
     gene            3265..4887
                     /gene="terL"
                     /locus_tag="ACJJD2_001037"
     CDS             3265..4887
                     /gene="terL"
                     /locus_tag="ACJJD2_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HGG7579593.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAVSARRAKVFD
                     PIGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTVLDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWRGVKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYQANKDEMERGAVTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIVIGGYQRSMG
                     RLYVVEAQIKKRLPDLIIEDVICLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFGNEIKSKWSR"
     gene            4887..6455
                     /locus_tag="ACJJD2_001038"
     CDS             4887..6455
                     /locus_tag="ACJJD2_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HGG7579594.1"
                     /translation="MAKKDNKTKIQKPEAALQTDAAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDDGLLLRTRENPEGEALWPLGWVVHTQKSRSVRQARNGLFRSLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTTATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPHADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPVNRTTLAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            6442..7737
                     /locus_tag="ACJJD2_001039"
     CDS             6442..7737
                     /locus_tag="ACJJD2_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HGG7579595.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLSNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDSYPTTAYKAPDGSLYTADKGFGYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQNFDDSYYAFLPDMLQNPEHVIRDNRELIFTARYKGS
                     ALWAVLKYIKEVDEIYLQSYRISNDKEIAKFMAKKKVLK"
     gene            7847..8263
                     /locus_tag="ACJJD2_001040"
     CDS             7847..8263
                     /locus_tag="ACJJD2_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HGG7579596.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            8494..9555
                     /locus_tag="ACJJD2_001041"
     CDS             8494..9555
                     /locus_tag="ACJJD2_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HGG7579597.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPEGAALSADVFAQLAEK
                     DSRIAALSAQNGTPDLTRYAPVSLVRDLQNQVAALTAEREADKGGELITAALSAGKLL
                     PAQKEWAEGVLKQPGGFAFLSGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            9617..10126
                     /locus_tag="ACJJD2_001042"
                     /pseudo
     CDS             9617..10126
                     /locus_tag="ACJJD2_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10116..11261
                     /locus_tag="ACJJD2_001043"
     CDS             10116..11261
                     /locus_tag="ACJJD2_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HGG7579598.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            11258..11926
                     /locus_tag="ACJJD2_001044"
     CDS             11258..11926
                     /locus_tag="ACJJD2_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HGG7579599.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            12027..12374
                     /locus_tag="ACJJD2_001045"
     CDS             12027..12374
                     /locus_tag="ACJJD2_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HGG7579600.1"
                     /translation="MDKELNPSIGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            12388..13443
                     /locus_tag="ACJJD2_001046"
     CDS             12388..13443
                     /locus_tag="ACJJD2_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HGG7579601.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADELGAAANVRDGEAQLMAAPAGVSTECR
                     LTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLG
                     TVDIAITSADGVPSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGID
                     LDEAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANRAADTVN
                     RIEWFKAGAINVTEMPS"
     gene            13440..14000
                     /locus_tag="ACJJD2_001047"
     CDS             13440..14000
                     /locus_tag="ACJJD2_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HGG7579602.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            14011..15984
                     /locus_tag="ACJJD2_001048"
     CDS             14011..15984
                     /locus_tag="ACJJD2_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin knob domain-containing protein"
                     /protein_id="HGG7579603.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDDTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAGGSSNLPVENTACHIQVIAGTKHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVRNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAANGLAVGTKQEDEIKRHVHKVFSHWVNHPHAA
                     ALGYEDHNERQRSALVSTWTDENLNDNGFLTPRPDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETVNAGALDAGTLAQNLQDKADRAHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRHRDSLLEALQD"
BASE COUNT         4042 a         4259 c         4581 g         3230 t
ORIGIN      
        1 ttttacgaaa agatgattga gctgtggtcg agcaaaagcc gtgaggcaag cgaacgggct
       61 gatttggcgg cgtttgaatt tgcggagggc gaactggcca attatcggga aatgctgaaa
      121 cggcacctgc aaaccaaaag tgtggaatag caatgcgtat tttggatatt tttaaaaacc
      181 cggcgacagg caatgtgtcg cactcgaagc tgtgggcaaa cgtcgcctgc gcggcgggga
      241 cgtttaaatt tgtgatgttg cccgacccgt cggcggagat ttgggcggtg tatttgggca
      301 ttgtcggcgg ctatgccgtg gcgcgctcgt ttgtcagcgt caaacgtcag gaggtcgaga
      361 atgaatctcg tgaaactgct ggcgaataac tggcagccga ttgccatcat cgcgcttgtc
      421 ggcacgggtt tggcggtgtc acaccatcaa ggctacaagg cagcctttgc gaagcagcag
      481 gcggtcatcg acaagatgga gcacgataag gcgcaagccc tgctgttgtc ggctcaaaac
      541 tatgcgcgcg aactggaact ggcacgcgcg gaagcgaaaa aatatgaagt caaggcgcac
      601 gctgtcggca tggctttggc gaaaaaacag gcggaagtca gccgtctgaa aacggaaaat
      661 aaaaaggaaa tcgaaaatgt ccttactcaa gaccgtaaaa atgcaggcgg cggttgtatt
      721 gacggctttg gccatcacgg cttgcagctc tacaagcgcg ccctcggcta cggaaattaa
      781 ggttgtcgaa aaggcggtca tgccgacacc gcctgccgca ttgatggtcg cgccggtacg
      841 cccaaatccg ccgaaagacg gcaagacggc cacgctgttg gaacacgccg ccgagtttgg
      901 cggctatgtg gcggagttgg aaaatcaaaa tcaggcttgg cgcgactggg cgggcaatca
      961 ctcccgcaaa gtcggaaact gacaaaaaag cccgcgtagg gcgcgggctg agggtgaaag
     1021 cggattttat acctctttta caggggtagc ggcggtagtg cttttcagca aatcgactgc
     1081 gtgctgacag ttttgcttgc tggtgtagcc ttcgccctga gcgatgattt catggttggc
     1141 tgctttcaaa cgccaacggt attcgccttt tgcgtcttta tagatttcaa aatacataag
     1201 gtttctccta tgaatgagta cacgttttct taccgcttta acggcaagtc ctggtcattg
     1261 agcatttggg cggacaaccc tgaagaagcc agggcgaaat ttcgggctgc acgagaaaat
     1321 gcgcactatg acggcgaagt tgtagcaaag gtttatacat ttgtaaatat ttcgtgggtt
     1381 aagaaattgt acaagcggac aaaatattta atgggtatca aagaatgacc taccgtgaat
     1441 tagttgaacg tcagttggct gtgcgccatg ccgatttgga attgggctta agccgcgcac
     1501 gcgagcaaga gccgtttgtc attcatgttt ccgatctgtt ggataaggca ggcattgagt
     1561 acgcggtacg catggataag gattttcaga cgacgtttca ccttgaatat ccaattacga
     1621 actatgacac ctttaaacgt gcggtttggc aaactttggg ggcgtattac tgtgtttgta
     1681 atgatggtga tggactggag attgccagca atcgccctga cggttacgcc gtccgtatcg
     1741 tattcggcga tgtgccggtt taaaggggtt ttaaatggac tttgaatttg gtttcagaac
     1801 cctgtggccg attgcgacgg cggcattttg gttttgggtc aacggcattt caggccgcct
     1861 gaaagaggcg gacaagcgta tcgacgacct taaagaggag ttgcacgcgg tcaagctctc
     1921 ttatcacacc aaggcggacg ccaaggcaga cagcactaat attgcggcgg ccttggagcg
     1981 aattgaaaac aagttagaaa aagtaaacga aaaactggac aggaaagcag acaaatcatg
     2041 agcgacccga ttttggaagc cttggcgcgt attgaaaaca agactgatca aacgctgaaa
     2101 aatcagaaag aaatgcaggc ggaaattgcg caaatccgcc aagacacgaa acgcacggcc
     2161 attacattcg gcgcactggg cggcggcgtg attacggtcg gctgggaatt gcttaaagcg
     2221 aaaatgggac tgtaattatg gctcacccgc aagaaatccg tgaaaagtta cgtcggctct
     2281 atgtgagcgg cgagcaaact ttggaaacgg cggccttgat gtgcgaaatc ccgcagacca
     2341 ctgcgcgtgc gtggaaacgt gcggataagg aaaaaggcga cgactgggat aagatgcgcg
     2401 ccgcctacac tttggccggc ggcggtattg aggacttgag ccgtgcgatg ttggccggtt
     2461 ttatggtgca gtacaacagc acgatgacga tgctgcagga ttcgagtacc gaagatttgc
     2521 ccccgtccga ccgcgccaag ctgttggcca gcctggccga tgcgtttacg aaaaccgtat
     2581 cggccaatgc gcgtgtgatg ccggaaacgt caaaactggc gacggctttg gaattgattg
     2641 agttcttgat ggcgtttgtg caagaaaaac atcccaaaca tttgcctgcc tttgtggagg
     2701 tattggagcc gtttggggcg gaagtggaga agaagtttgg ttaatagccg tctatcaatc
     2761 tcccataacg tgatcctcct actgaaaata cttcaacatc tgactttaaa cgctctccca
     2821 atattatggt ttggcaacgg gaacaggaat atttatgaaa agcaccttca tacccattga
     2881 attgaagaat cgatttgaca ccctgctcgt aacattgggg acaaatatca tgaattggct
     2941 cgctgttcgc catctctgtt ttcaatcgat agacgaaaga accaggagca agttcataca
     3001 attggtagcg ttgcttctct gtagaccaat tttttactgc caccagttct ttttccaact
     3061 catctatacg gctaattgcc gccgtataag aagattgggc ttcaaataaa tcagtttgaa
     3121 taccagcaat gatttgatta agttcgatgg ttttttgcgc tacctctgcc tctgttttga
     3181 gctggttaaa cccttttaaa agtgatcctg cttcttttag gcctataaat gcgttagaaa
     3241 tgaatccagt cattataaat actcatgaaa acaaaagaat tcctcaaatc ccttgccgaa
     3301 ctggccgcca gtttgcgcca agtcatcgaa gcggaagtgg acggcttcga tgcgtcgccc
     3361 aaggctgttt ctgcacgccg tgccaaggtg tttgacccga taggcggtta cgaatatttc
     3421 gtcaacacct acttccccca ttatatccgc tcgcctgaga aatccgaact gcatgcgttt
     3481 ttattcagcc gtctgccgga gattatccgc tcccccaaag gggaaaatga ggcggtgggc
     3541 gcaccgcgtg gcgagggtaa atcgacgcag gttacccagt tgtttacgct gtggtgtatt
     3601 gtgaccggcc aaaaacatta tgccgttatt gtgatggaca gcatagacca ggcatacccg
     3661 atgctcgaag ccatcaaggc ggaattggaa tttaatccgc gcctgaaaac cgactttcct
     3721 gaagtctgcg ggcaaggccg tgtatggcag gccggtacga ttgtgacggc caatgacgtt
     3781 aaggtgcaag tggccggtag cggtaaaaag ctgcgcggtt tgcgtcacgg cccttaccgt
     3841 cctgacttaa ctgttttgga cgatattgag aatgacgaac aagtccgcaa ccccgaacag
     3901 cgcgacaagc tcaatgcgtg gctgactaaa acggtattgc ctttgggcgg ggtcggtcag
     3961 aaatacgatg tgatttatat cggcacgatt ttgcattacg acagcgtact taaccgcact
     4021 ttgaataacc cgttttggcg gggtgttaag tttaaggcga tgaaacgctg gcccgaccgc
     4081 atggatttgt gggacaggtg ggaggaactt ttccgaaacg acggcgagac ggtggccgag
     4141 gcgttttatc aggcaaacaa agacgagatg gagcgcggcg cagtcacttc ttgggcggcg
     4201 cgtggcgtac tcgcgctgat gaaaatccgt gcgcgtgacg gccatgcgac gtttgattcg
     4261 gaatatcaga atgatccggt cagtggcgaa gatgcgccgt ttgccaagtc gatgaagttt
     4321 tggaacgacc tgccgtccga tttggtgtat ttcggtgcgc tcgacccgtc gctgggtaaa
     4381 gcgggggcga gccgtgaccc gtcggcaatc gtcatcggcg gctatcagcg gtcaatgggc
     4441 aggctttatg tcgtggaggc gcaaatcaaa aaacgtctgc ccgacctgat tatcgaagac
     4501 gttatctgcc tgcaccgtca atatcgttgc aaactgtggt ttgttgagac ggtgcagttt
     4561 caggagtttt taaaagacga gctggtcaag cgcagcgcgg cgcgtggaat acctgtcccg
     4621 gcgcgggcgg tcaagccggt atcggacaaa ctcttgcgga ttgagacttt gcagcctcac
     4681 atggcaaacg gtttgattct gttgaatgag agccaacaga cgctgataca gcagttccgc
     4741 cattttccaa aggctgatca tgatgatggt cctgatgccg tgcatatgct ctggtcgggg
     4801 gcggtggcca attgtgtgcc gatagaatgg caaagcccta ccgataacga ttttggtaac
     4861 gagataaaaa gtaaatggag ccgataatgg caaaaaagga caataaaact aaaatccaaa
     4921 agcccgaggc tgcattgcag acggatgcgg ctcaaattac ggcgaccggt cgggttatcg
     4981 ccgagcatcc gtccaatttt attacgccgc aaaagatgcg cgccctcttc gaggacgcag
     5041 aaagcggcga catccgcgcc caacacgagc ttttcgcgga cattgaggag cgcgacagcg
     5101 acatcgcggc aaatatgggg acgcgcaaac gcgcgctgct gacgctcaac tggcgcgtcg
     5161 ccccgccgcg aaatgcgacg cccgaagaag aaaagctgtc cgaccaagcc tacgaaatga
     5221 tggacagcct gcctaccctc gaagacctga ttatggattt gatggacgcg gtagggcacg
     5281 gattttctgc gttggaggtc gagtgggtat tttcagacgg cctttacctg ccccgaaact
     5341 ttatccaccg cccgcaaagc tggttcaaat gggacaaaga cgacgggctg ctgctgcgta
     5401 cccgcgaaaa tccggaaggc gaagcgttgt ggccgctggg ctgggtcgtt catacccaaa
     5461 aatcgcgcag cgtccggcag gcgcgcaacg ggcttttccg ctcgctttcc tggctgtata
     5521 tgttcaaaca ctacgccgtc cacgattttg ccgagttttt ggagctgtac ggcatgccca
     5581 tccgtatcgg caaatacggc gcgggcgcaa ccaaagagga aaaaaacacc ctgcttcgag
     5641 cggtggcgga aatcggtcac aacgcggcag gcatcatgcc agaaggtatg gaaatcgagc
     5701 tgcacaacgc tgcaagcggt acgacggcaa ccagcaatcc gtttttgcag atggccgatt
     5761 ggtgcgaaaa atcggcggcg cggctgattt tggggcaaac gctgaccagc ggtgcggacg
     5821 gaaaatccag caccaacgcg ctgggcaata tccacaacga ggtacgccgc gatttgctgg
     5881 tgtcggacgc aaaacaggtg gcgcaaacca tcacaagcca aatcatcgga ccgttcctgc
     5941 aaatcaacta tccccatgcc gacccaaacc gcgtgccgaa atttgaattt gacacgcgcg
     6001 agccgaaaga catcgcggtc tttgccgacg ctatcccgaa actggtggat gtcggcgtac
     6061 aaatccccga aagctgggtg cgcgacaaac tggtcattcc agatgtgcag gagggtgagg
     6121 ctgtgttggt gcggcaggta ccggacaatc cggtaaacag aactacattg gcggctttat
     6181 ccgcccacac cgtaccatct aaggctacgg gcaggcatca ggaaatattg gacggcgcgt
     6241 tggatgacgc gctggttgag cccgatttca attctcagct caacccgatg gtgcgtcagg
     6301 cggttgccgc acttaatgct tgcaacagct acgaggaggc agatgccgca ctgaatgcgc
     6361 tttatccgaa tttggacaac gcgaaactgc gtacctatat gcagcaggcc ttgtttatca
     6421 gcgatatttt gggacaagac catgcccgcg cctgatttgg gatttgcctt aagtctgccg
     6481 ccaaaaaagg caatcgagtg gctggaaagt aaaaaggtta cggcggagag ctaccgcaat
     6541 ctgacagcct ccgaaattgc caaagtctat acgattgccc gcatgaccga cttggatatg
     6601 ctcaacgaca tcaaaacttc gatggttgaa tcggcaaaaa gtggacagtc gtttgacgat
     6661 tggcgaaaag gtatcttgaa tctgctcagc aacaagggct ggctgcatcc gaacgggcat
     6721 aacggtaagg atatcatcga cccagccacc ggcgaggtat tcggttcgcc gcggaggttg
     6781 gagacgattt accgtaccaa catgcaaact gcctacaacg ccggtcaata tcaaggatat
     6841 atggcaaata ttgatgcacg accttattgg atgtatgacg cggtaggcga cagccgcacc
     6901 cgtccggcgc attcggcaat agacgggctg gtgtaccgct acgacgaccc gttttgggca
     6961 acgttttacc cgcccaacgg ctacaactgc cgctgctcgg tcatcgcgct gtcggagcgg
     7021 gatgtggaac gccaggggcg gattgtcggg caaagcacgg cggataatct ggtcgagacc
     7081 cataaaatct ataacaaaaa aggcgacagc tacccgacga ctgcctacaa ggccccggac
     7141 ggcagcctct acacggctga caaaggcttc ggctacaacg ccgggcgaat gaactaccgc
     7201 cccgatttag acaagtacga ccgcgcgctg gcgcatcaat ttgccaaagc ggaaatgggt
     7261 ggtgcagatt ttaaaaccag ctttaaacag cttgaaaaag agttttatga agtcaagcaa
     7321 cgtttggata ttgatggcaa gcccgataaa gagcagaaaa tcaaaatccg aaatgcgcta
     7381 tcaagacagc ttaaatttgc tgcgggtgta ttgagcaagg aaacgcaaga attggcaggt
     7441 atgacacgag cgacggtgtg gctgtctgat gatacgttgg ttaaacaggt agacagccgt
     7501 gaggggcaga atttcgatga ctcctactat gcttttttgc cggatatgct gcaaaaccct
     7561 gaacatgtca tccgcgacaa tcgtgaattg attttcacag ctcgctataa aggctcggca
     7621 ttgtgggcag ttttaaaata tattaaggag gtggatgaga tttatctaca gtcgtaccga
     7681 atcagcaacg acaaagagat tgccaaattt atggcgaaga agaaagtatt gaaatagacg
     7741 ttgggcaagg ctcgaattca cttgcacacg ctctcgtaca ccctaaaggg caggctgcgg
     7801 tatcgagatt atcaccgctt ttccaacgcc tataaggaat cataccatga ttgatgtcaa
     7861 aatagacaat atctttgtcg tcctaaacca aatcgagcgg cttggcaacg ggatcgaaaa
     7921 ccgctacctg ctgatgcgcc gactgtccga aaccatgcac acggcggtca agctcaattt
     7981 ccgctacgca ggccgtccga aatggttggg gctaaaatac cgcgacggca agccgctttc
     8041 ggattcgggt cgtctgaaag acagtttttc cacactgtca gacaacgata cagcccttgt
     8101 cggtacgaat atcgtctatg ccgccatcca caacttcggc ggtatggcgg ggcgcaaccg
     8161 caaagttcgg attccgcaac gggaattttt gacgctgacg gacgacgaca aacaggcttt
     8221 gatggacgat gtgcaggatt atttttcggg tctgataccg tgaatttata aaaccctcaa
     8281 aaacgcgctt tttagcgcgt ttttttatgc gggtaataca aacccctgcc caagatataa
     8341 aaatcaatcc tagacgcttc taaaaagccc ctgaaaacga ttaattgtgt atcgcgcgga
     8401 caggttttaa aaaaatggcg ggagggtttg aagcacgcct actctttgtt gttttttcaa
     8461 ataggcaaaa tgaccgtatt gagagaggta cacatgtcca aaaatgcaca aaaaacccta
     8521 cttgccgtgt gcagtttcga ggtgcagcca aaagacgggc gaatccaact gctgccatat
     8581 ggcgaatttc gcgcagtaga cggtcgtccg actgatgtcc ctgcgtggta tctgaccgaa
     8641 gaaaacggtc atgatgtcgc gttgttggcc aacagctcgc gcaatcagtt ggttgtcgat
     8701 tatgaacacc agacgctcta caaagagaaa aacggacaac ctgcacctgc cgccggttgg
     8761 atgcgttggc tggagttcac gcctaaaggc atgtttgccg aagtggagtg gacggacaag
     8821 gcggctgcgg caattgccgc aaaagagtat cgctacatct ctgctgtgtt ttcctatgac
     8881 acaaagggat atgtaagcaa aatttttcac gcagcgctga caaatttccc cgcgttggac
     8941 ggtatggacg aggtgctggc ggcagcgtcg gcgcaaattt taaaaccgga aacggagcaa
     9001 aaccctatga aagagttgtt acagcaactg ttcggtctgc ctgatgcggg cgaagaagaa
     9061 ctgaaggcgg cattgtccgc gctcgtggaa gccaagccgg aaggtgcggc tttgtccgcc
     9121 gatgtattcg cgcagctggc ggaaaaagac agccgcattg cggctttgtc ggcgcaaaac
     9181 ggcacgcccg acctgacgcg atacgcgccg gtgtcgctgg tgcgcgacct gcaaaaccaa
     9241 gttgccgccc tgaccgccga gcgcgaagcc gacaaaggcg gcgaactgat taccgccgca
     9301 ctgtctgctg gcaagctgct gcccgcacaa aaagaatggg cggaaggcgt gctgaaacag
     9361 ccgggtggct ttgccttttt gagcggcttt atcgaaaacg cccagccggt cgctgcactg
     9421 gcaggctcgc aaacgggcgg caaagcaccc gacgaacgcg tcgccgcact gactgcggaa
     9481 gaggcagccg cagcaaaaat gctgggcatg tccggcgaag aatttgtaaa aatcaaagaa
     9541 agcgaaggta agtaatggac aaatcagcga ttttgaccgc aatcacggca gcattccgca
     9601 aagaatttca aacgggggcc tgcaaaaccg cctgaaccgt ttaaccgcca aacaggtgca
     9661 gccggtagcg caggcggtgc gcctgttatc cacgtcatcg ctgttgtcgg tggcaacggc
     9721 attaatcgag gcgcatggcg aagagatgac cgcgcccgat ttgattgagg ttaaccgcgc
     9781 catgcgccgc cgtatgcagg ccgagattgc cgccttgcgg gcggtgcaga cggctgctgc
     9841 cgagtctggt gggctgacgg ccaacgccgt gtataccgag gcttaccaaa cggcagaatc
     9901 cctgcgcgcg gcggcaggcc gtctgaatgc gttggttgcg gcggccatca accaaaagcc
     9961 gccgctgatt gtgcgccaag ccccaatcga cggtacgata caccaaatcg cccacgagtt
    10021 ttacggcgat atggcccgcg cagcagagct ggtgcggctc aatccccata tccaccaccc
    10081 cgcgtttatc aagcgcggca ctttggtcaa cagctatgca aaataattca tacggctatg
    10141 ccgtgtcggt gcgcgtgggc ggtaaagagc accgccactg ggagcgctac gacatcgaca
    10201 gcgacttttt aatccctgcc gacagcttcg attttgtcat cggcaggttg gggccggagg
    10261 cggccatacc cgatttaagc ggagagagct gcgaggtagt gatagacggg caaatcgtga
    10321 tgacgggcat catcggcagc cagcgccacg gcaaaagcaa gggcagccgc gagttgagct
    10381 tgagcgggcg tgatttggcc ggttttttgg tggattgctc cgcgccgcag ctcaatgtaa
    10441 agggcatgac ggtattggat gcagccaaaa agctggccgc gccgtggccg cagattaaag
    10501 cggtggtgct taaggccgaa aacaaccccg ctttggacaa aatcgacatc gagccgggcg
    10561 aaaccgtatg gcaggcatta acccatattg ccaactcggt cgggctgcat ccgtggctgg
    10621 agccggacgg cacgttggtg gtgggcggtg cggattacag cagcccgccg gtggcgacat
    10681 tgtgttggag ccgcaccgac agccgctgca atatcgagcg catggacatt gagtgggata
    10741 ccgacaaccg cttttccgag gttacttttt tggcgcaatc gcacggccgc agcggcgaca
    10801 gcgccaaaca cgatttaaag tgggtgtaca aagacccgac gatgacgctg caccgcccta
    10861 aaacggtggt ggtgtccgat gccgacaatt tggccgcatt gcaaaagcag gctaaaaagc
    10921 agctggccga ctggcggctg gagggattta cactcacgat aaccgtgggc ggccataaaa
    10981 cccgcgacgg cgtattgtgg caacctggcc agcgtgtgca tgtgatcgac gacgagcacg
    11041 gtatcgatgc ggtgtttttt ctgatggggc ggcggtttat gctatcccgc atggatggca
    11101 cgcaaaccga gctgcggctc aaagaggacg gtatttggac acccgacgct taccccaaaa
    11161 aggccgaggc ggcgcgcaag cgcaaaggca aacgcaaagg cgtgagccat aagggcaaaa
    11221 aaggcggcaa aaaacaagca gaaacggcgg tgtttgaatg agtttgagta aattggcgaa
    11281 aaaaacggca caaactgcta aaaatatcgg cgaaaccctg cgcgcggcct ttcggggaaa
    11341 aatcacgctg gtggtgtcgt ccgagccgat acagcgcgtg cagttgagcg gcttggccga
    11401 cgaaaccctg caagaccttg aacatttgca ggaatacggc tttgccagcc atccgcccga
    11461 cggcagcgaa gcggtagtga taccgctggg cggcaatact tcgcacggtg tgattgtgtg
    11521 cagccagcac ggcagctacc gcatcaaaaa ccttaagccc ggcgagacgg cgatttttaa
    11581 tcatgagggt gcaaaaatcg tgattaagca aggcaaaatc attgaggccg attgcgacgt
    11641 gtaccgggtt aactgcaaac aatacgaggt taatgcggcc acggatgcca aatttaacgc
    11701 tccgttggtg gagaccagtg cagtgttgac ggcgcaaggc caaatcaacg gcaacggcgg
    11761 catggccgtc gagggcggcg acggagccac ctttagcggc gatgttaacc aaacgggcgg
    11821 cagctttaac accgacggcg acgtggtggc cggcaatata tcgttgcgcc agcacccgca
    11881 taccgacagc atcggcggca aaaccttacc ggcggaaccg gcatagacaa gcagaccttt
    11941 ggcagccttc gggctgcttt ttttgtgcgt gtgggattga agcccgtgta ctccgtgagg
    12001 ccgtctgaaa acggcaaaat gccaacatgg acaaagagct aaaccccagc atcggcgact
    12061 ataccggccg caccgtcgat acgctgcaaa atgccgtgta tatccgcttg atgacaccgt
    12121 tgggcagctg gtgggcggat aaaacgctcg gctcgctgct gcatttgttg cagcgcgaaa
    12181 aagacctgca acgggtcagc ctgttggccg agcaatatgc cgatgaggca ctgcaaccga
    12241 ttgttaagag cgggcgtgcc gacaagatta ccgtgcgcgc agagcagccg cacgacggcc
    12301 gcctgatcct gcatatccgg gtggatacgg cggcgggcgg gtttgattac cgccacgaag
    12361 tgcccgtgat ttaaagaggt tttaaacgtg tttgaaacgc cgacatttga gcaaatccgc
    12421 gagcgtatcc tgcgcgatac caaaagcctg tggccggatg ccgatatcag ccccgacagc
    12481 gaccattatg tgcacgccag ccgtttggcc agctgcgccg aagggcaata tgcgcatcaa
    12541 agctggattg tgcggcagat tttccctgat accgccgacc gcgagtattt ggagcggcat
    12601 gcctccatgc gcggcttgcg ccgccgcaat cctaccacgg ccagcggcac gctgaccgta
    12661 agcggtattg cgcaatccat gctttcagac ggcctgcaag tgcgtatcgg ccagcgtttt
    12721 taccgcacta ccgcccgcgc cgttatcggc agcggcggca cggcggaaat accggcaatc
    12781 gccgacgagc tgggcgcggc cgccaatgtg cgcgacggcg aggcgcaact gatggccgcc
    12841 cccgccggtg tgtccaccga atgccgcctt accgtacaag gcggcaccga ccgagaaagc
    12901 gatgcctcac tgctggcgcg tctgttggaa atcatccgcc gaccgcccgc aggcggcaac
    12961 cgttacgact ataaaaactg ggcgttgagt gttgacggcg taaccagcgc atatgtttat
    13021 ccgctgcgcc gcggcttggg tacggtggat attgccatta cctccgccga cggtgtgcca
    13081 tcggaagaaa ctgtgcgccg cgtacaggct tatatcgacg agatgcgccc ggtaacggca
    13141 aaaaatgcgc tggtactcaa gccaaccgta acggcggtgc ctgttaccgt gcaagtcaag
    13201 ctcgacggca tcgacttgga cgaggccaag cgccgcatac ggacggccct aaaagaatat
    13261 ttcgacaccc tgatccccgg cgacggcctg actgtgtcgc aaatcgaggc ggctatcagc
    13321 aatgtggatg gtgtgatcga ccgccgtctg actgcgccga cggccaaccg tgccgccgat
    13381 acggttaacc gcatcgagtg gtttaaagcg ggcgcgatta atgtaacgga gatgccgtca
    13441 tgagctatca agacatcttg cggggcctgt tgccccccgt gtcgtatgcc cgcaatgccc
    13501 cgcgtgtgcg ggcgcaggca gaaatagacg gcgcagcgct ggatgcggtg gcggaatcgg
    13561 ctcaaagcgt tgccgatgcc gtcgacccgc gcagcgccgg ccaaatgctg gccgattggg
    13621 agcgcgtatt aggtttggac ggtacgggca aaaaccgcca gcgccgtgtg ttggccgtca
    13681 tggccaagct aaacgaaaca ggcggcttga gtattcctta ttttgtgcgt ttggccgagg
    13741 cggcgggcta tcaaatccaa atcgacgaac cgcagccgtt ccgcgccggt gtaaaccgcg
    13801 ccggcgaccg tcttgcgccg caggaaatca tgtgggtgtg gcacgttaac gtgcgcggcg
    13861 gcaacaaccg cattacccga ttccgcgccg gtatctcggc ggcgggcgac aggctgaccg
    13921 attacagcga tgccgtgatc gagagcctgt tcaaccgcct caagcccgcc cacaccgcta
    13981 tccgatttac ctaccgataa ggactaaacc atgcacccca tcgaaacccc cgacaagacc
    14041 ttccacgacg gcgacggcgt gtccgaattg ggcaccatcc tgcccgcgtg gtggctcaac
    14101 caagtgcaat ccgagctgct ggccgtgctg actgcggccg gtatccagcc ggataagtcg
    14161 cagcctaatc aattactggc agcactaaat aggctggctg tagttaccac cggcgaccaa
    14221 accatcaccg gccaaaaaac ctttaccgcc caaacccaat tccaaagcgg catccattta
    14281 tccgccaacc agacgaactg gaacggcggc cacaaagcct acatcggcgc ggatgccgac
    14341 aacgcccaca tcgtcttcgg cgacgacacc ctccgcctgc acggcgcaaa caaccgcatt
    14401 tcctacaaca accacgacat cttccacaaa gccaacaaac cgcgttttgc cgaagacatc
    14461 gaaggtaagc cgaacacact gtccggatac ggcatcggca atttcaaagt cgaaaccttc
    14521 cggggcgatt tgaacaccct caaaacagac ggcatctatt ccctgccgac ggcgggcggc
    14581 agctccaacc tgcccgttga aaacaccgcc tgccatatcc aagtcatcgc cggcacgaaa
    14641 cacggctggt gcaggcagtt gggttatccc gcctacacgt ccgacgtgta cgaacgccac
    14701 caaacgagca gcgcaaacga caactggtcc gcatggaaaa aactcaattc ggacggcatc
    14761 cccgtcggcg cgatcgtatc ctttcccaaa gccgtccgaa accccgcagg ctatctcaaa
    14821 gccaacggca cgacctttgc acaaaacacc ttccccgacc tctaccgcgc cctgggcaac
    14881 agcaaccgcc tgcccgattt aagccgtacc gacatcggca tcaccgcatg gtttccgtcc
    14941 gaccaaatcc cgaccggctg gctggcgttt gacgacatcc gcacgcgcgt aaccgaaacc
    15001 gcttatcccg agctgtaccg tctgctgacc ggaaaatacg gcagcatcca aaacgtcccg
    15061 caggcggaag accgctttat ccgcaacgcc gccaacggct tggcagtcgg aacgaagcag
    15121 gaagacgaaa tcaaacggca cgtccacaaa gtattttcac actgggtaaa ccacccgcac
    15181 gcggcagccc tcggttacga agaccacaac gaaaggcaga gaagcgcgct cgtatcgact
    15241 tggacggacg aaaatttaaa cgacaacggc tttttaaccc cgcgcccgga cagcaaaatg
    15301 gcgacaggcg gcgacgaaaa ccgccccaaa gccctggttt taaaactgtg catcaaagcc
    15361 gccgacacct tgggcgaagc cgtgttctgg ataaagtccc acggcgaaac cgtcaacgcc
    15421 ggcgcgctgg acgcgggcac gctggcgcaa aacctccaag acaaagcaga ccgcgcccac
    15481 acccacaccg ccgcccaaat ccaagggctg gacgaaaaaa tcagcaccgc cgttgccgcg
    15541 caattcacac gccaaaccat cggcggcgtg gatattgtca gattccccga cggcacaatg
    15601 atacagaccg gcagctacag gttcacacga agcggcggcc ccatagaaaa cgaagtcgtc
    15661 ttccccgtcg cctttgccga cggcaacgtc aaatgcttcg tatccgaacg ccattcggga
    15721 cgcgttaccg gcgatcgaag gcaacacaac tggctgttta tccgcgcaaa aaaccacgcc
    15781 gccgccatta ttaccaactg gtacgaaggc agttgcgact ggatggccat cggcaaagcc
    15841 gcctcgggaa acgccgccag ctccccgata ggccccgaaa tacctgaaac caacgaagaa
    15901 ccgcaaagag agagtggaag aacatcaacc ggcccccgaa accgccgcca ccgagacagc
    15961 ttgctcgagg cactgcaaga ctagcgggct gtagagatgg ctgtagagat ggctgtagag
    16021 atggctgtag agatggctgt agagatggct gtagagacgg gttgtagaga tgggttgtag
    16081 agatggctgt agagatggct gtagagatgg ct
//
LOCUS       DBBZXW010000036        15683 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.036, whole genome shotgun sequence.
ACCESSION   DBBZXW010000036 DBBZXW010000000
VERSION     DBBZXW010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15683
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.036"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(84..737)
                     /locus_tag="ACJJD2_001049"
     CDS             complement(84..737)
                     /locus_tag="ACJJD2_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HGG7579604.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
     gene            complement(769..1281)
                     /gene="coaD"
                     /locus_tag="ACJJD2_001050"
     CDS             complement(769..1281)
                     /gene="coaD"
                     /locus_tag="ACJJD2_001050"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HGG7579605.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            complement(1405..2088)
                     /locus_tag="ACJJD2_001051"
     CDS             complement(1405..2088)
                     /locus_tag="ACJJD2_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HGG7579606.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            complement(2245..2511)
                     /locus_tag="ACJJD2_001052"
     CDS             complement(2245..2511)
                     /locus_tag="ACJJD2_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HGG7579607.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            complement(2584..3054)
                     /gene="rlmH"
                     /locus_tag="ACJJD2_001053"
     CDS             complement(2584..3054)
                     /gene="rlmH"
                     /locus_tag="ACJJD2_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HGG7579608.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            complement(3108..3494)
                     /gene="rsfS"
                     /locus_tag="ACJJD2_001054"
     CDS             complement(3108..3494)
                     /gene="rsfS"
                     /locus_tag="ACJJD2_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HGG7579609.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            complement(3553..4158)
                     /gene="nadD"
                     /locus_tag="ACJJD2_001055"
     CDS             complement(3553..4158)
                     /gene="nadD"
                     /locus_tag="ACJJD2_001055"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HGG7579610.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVRRGETYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSVRIL
                     SAPMHNVSSTEIRRNLAGQGVSDGIPPAAARYIREHGLYEK"
     gene            complement(4155..4754)
                     /locus_tag="ACJJD2_001056"
     CDS             complement(4155..4754)
                     /locus_tag="ACJJD2_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HGG7579611.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESQIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            complement(4783..6324)
                     /locus_tag="ACJJD2_001057"
     CDS             complement(4783..6324)
                     /locus_tag="ACJJD2_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7579612.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFAAEVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
     gene            6563..7948
                     /locus_tag="ACJJD2_001058"
     CDS             6563..7948
                     /locus_tag="ACJJD2_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HGG7579613.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            7968..8486
                     /locus_tag="ACJJD2_001059"
     CDS             7968..8486
                     /locus_tag="ACJJD2_001059"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HGG7579614.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(8825..9742)
                     /gene="thrB"
                     /locus_tag="ACJJD2_001060"
     CDS             complement(8825..9742)
                     /gene="thrB"
                     /locus_tag="ACJJD2_001060"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HGG7579615.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACTRLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKVFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(9779..10507)
                     /gene="ubiG"
                     /locus_tag="ACJJD2_001061"
     CDS             complement(9779..10507)
                     /gene="ubiG"
                     /locus_tag="ACJJD2_001061"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HGG7579616.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            10659..11900
                     /locus_tag="ACJJD2_001062"
     CDS             10659..11900
                     /locus_tag="ACJJD2_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HGG7579617.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRSWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSAAGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKLPVLFDTQAPTGTNYWIYVATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            12033..12596
                     /gene="gmhB"
                     /locus_tag="ACJJD2_001063"
     CDS             12033..12596
                     /gene="gmhB"
                     /locus_tag="ACJJD2_001063"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HGG7579618.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            12626..13369
                     /locus_tag="ACJJD2_001064"
     CDS             12626..13369
                     /locus_tag="ACJJD2_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG7579619.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAKMPSETV"
     gene            13366..14055
                     /locus_tag="ACJJD2_001065"
     CDS             13366..14055
                     /locus_tag="ACJJD2_001065"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HGG7579620.1"
                     /translation="MTSLIHTLSDGMELTIEIKRRAKKNLIIRPIGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRRTLAKTPPQTAENRLPESILFHGRQLALTAHQDTQILLMPS
                     EIRVPEGAPEKQLALLQDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGVC
                     RKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPEAKQWL
                     KIHGRELFALG"
     gene            14167..14352
                     /locus_tag="ACJJD2_001066"
     CDS             14167..14352
                     /locus_tag="ACJJD2_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579621.1"
                     /translation="MPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHRSSETRDP
                     PGPTCGMKRLSWREVFY"
     gene            15593..>15683
                     /locus_tag="ACJJD2_001067"
     CDS             15593..>15683
                     /locus_tag="ACJJD2_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HGG7579622.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQAGGV"
BASE COUNT         3621 a         4746 c         3937 g         3379 t
ORIGIN      
        1 tgaagagatt tgcagtcaac cgttttcttg aaaaattttt ataaaaatat ttatcatatt
       61 gtttataaat taatttatat ttattaacct gcttttgcca tataaaattc ttccagcgca
      121 tgagagatat tttcagtctg ccattcgttt tttaagggtg caacaatttc gatttgtcgg
      181 ttttggtagg caaattgtat tttccatgca tacagaaaca tggtttcgga ttctgttccg
      241 ccgtataagc tgtcgcccag aatcggactg cccaaacttt tcatcgccac tctcaattgg
      301 tgcgttttgc ccgtatgcgg ttccaggatg aacagccgca gtttttcggc gatactgatg
      361 ctgtggaatc gggtaacggc gatattttct gtattgcgcg tcaacttcca cattccgcgt
      421 ctggattttt ccattccgcc tttaatccaa ccctgctttt tggacggttt gcggtcggat
      481 agtgccaaat aggttttttt gatgcttttg ccggcaaact gtccgctaag ggcggacgcg
      541 ctttctctgt tgagggcaaa cagtaaaatg ccgctggtct gtttgtccaa tcggtgcagc
      601 agccacacac gctctacgcc caactgtatg gcgagtgttc gggccagtcc ggtctcgccg
      661 ctgtcttggt ggacggatat gccgcccggt ttgttgatgg cgacgaagtc ttgatggcgg
      721 aacaaaattt ccaacatatc catatatgcc ttgcaaaaat agaagggttc aattttcgtg
      781 ttgatgttcg gcaaggattt tttcgtacac agcttgcggc acgtagcggt ggatcgtttc
      841 cgtccagcct tccggcccga ccagtccttt gaccatagtg gacgacactt cggcgatttc
      901 gcgcggcggc atgaggaata cggtggatat ttcgggggcg aggtcgctgt tgatatggcg
      961 catggaacgt tcgtattcgt aatccgaagc agaacggatg ccgcgcacga tgaatcctgc
     1021 atctacctca cgggcgtaat gcaccagaaa tcggttttca aatacatcgg ttctgacgtt
     1081 gggaaacatt ttagtaatat cgcacaacat atcctgcctt tcagcgacgg tataggtgct
     1141 gcgtttgtcg gggttaatgc cgatggcgac gatgagttcg tcaaacatag attgcgcctg
     1201 ccgtatcatc cacagatgcc ccaatgtggg cggatcgaaa ctgccggcat aaacggcgcg
     1261 gcgcggtgta ttcggtaaca tttgattcct cccggcttca tagtcggctg tgtgttggtg
     1321 cgtgtgcatc cgtattgtat gcccaaagta aaatgccgtc tgaagcattt tcagacggca
     1381 tagtcggacg gcgttttgcc ggcatcaatc ctcgccgttt aaagacaaca ggatgttcag
     1441 caggctgctg aagatgttgt aaagcgagat aaacagtgtc agtgccgcgc tgatgtggct
     1501 gtcttcgccg ccgtcgatga cggtgcgtac ctgccacata atcattaagg aactgaacaa
     1561 gacaaaaccg gcggaaatgg tcagggcgag tgcgggaata cccaaaaaca gattggcaac
     1621 cacggcgacc atcagaatga ccgcacctac ggtcaggaag cgtccgagcg cgttcatatc
     1681 gagccgggtt cggcgcgcca aggcggacat cgttaaaaag acggcggcgg tcatcgcggc
     1741 ggcaatgccg acgattttcg caccgtcggc aatatggagc gcgtattgca gcacggggcc
     1801 gatcaatacg cccataccga atgtgaatac catcagcagg gtaacgccgg tattgctgta
     1861 acggtttttc tcgatgaagt ggatcatacc gtagaaaaac gccaacacga cggcaaaccc
     1921 tatccagcgc gaaccgaagg cggcgtaaaa attgaaaccg gcattggcgg caagtgccgc
     1981 gcctgcggct gccggaatga atgaaaatcc gagcaggcgg taggttttct gcaggacggt
     2041 gtttttagaa accgtatgcg cggtgtagtc gtaaacgtcg tgttgcatat catctgctcc
     2101 tgaaagcgcg gttgggaata atgggggatt ttaacattgc ccaatgtcaa aatttgtccg
     2161 gttgcgtgaa gataaagttg tccagcgtat tttaaaggcc gtctgaagca gtttcggaca
     2221 gcctgtgttc aaaacggaaa accgttattg cggaacgtat ccctgaacgg catccgcgcc
     2281 gtcgccgaag aaatactgct ccatctgctg agccaggtat tcgcgcgcgc gcggatcggc
     2341 aaggcttaag cggttttcgt taatcagcat ggtttggtgg cgcgtccacg ccgcccacgc
     2401 ttcttgcgat acgttttcaa aaatgcgctt gcccaattcg ttgggaagcg gcggaaattt
     2461 catgccttcg gcttctttgt tgagcttgac gcagaatacc atgcgtgcca tagcggattc
     2521 ctttgctgtg ttcagaaata acggggtgat tttaaccgat taggggggcg gacaaaagcc
     2581 ttcttattcc cgatgataag gatggttgtg caggatggaa acggcccggt agagctgctc
     2641 ggtcagaagg acgcgcacca tgccgtgcgg cagggtgagg ctggacaggc gcatcatcat
     2701 gcgggcttgt tgtttgaggc ggtcggtcat gccgtccgcg ccgccgatga cgaagcagac
     2761 gtgttcgccg ttttgccgcc agcttttgag gtgttccgcc agctcgacgg aggtcggcgc
     2821 tttgccgcgt tcgtcaagaa cgacaaggaa cgcgccttgc ggaacggctt caaggatgcg
     2881 tttttcttcc gccgccatac cttgggcggc attcacgccc gcgccgcgtt tttcgggttt
     2941 gatttctttg agtgcgtagg cgacgtcgcg tccgaagcgt ttggcgtatt cggcgacggc
     3001 ctcatcaacc cagcgcggca ttttggtgcc gactgccaaa acggtaatgt tcaatgcttt
     3061 ctcccttaca ggaaaatgcc gtctgaacat tcagacggca tcgggaatca gtctgccgcg
     3121 tgccacggct tctgcattcc ggcgtggaaa ctcggtttct cgccgcccca aagggtgtcg
     3181 atgtcgtaga agtcgcgcac ggcagggagc ataacgtgga caacgaggtc tcctgcatca
     3241 accaacgtcc attcgccgct gtcgccttcg gtactgagga tttcaaaacc ggcttctttc
     3301 aaatcgacgg caacgttgtt ggccagtgct ttgacttggc gcgtactgtc gccgctggcg
     3361 ataatcattc tggcaaacag cgaagtttta tcttgcgttt cgagaacgga aatgtctttg
     3421 gctttgatgt cttcgagggc gttgacggcg accccgacca ttttttgcag gtcttgcagt
     3481 tcttgttcgt tcattatgtt cctaacggga tgttttcaga cggcattata gccgtttctt
     3541 actgatttga ctttattttt catacaaacc gtgttcgcgg atgtagcgtg cggcggcagg
     3601 cgggatgccg tctgaaacgc cttggccggc aaggttgcgg cggatttccg ttgacgacac
     3661 attatgcatc ggggcggaca agatgcggac gctgccgtcc tgaagcgcat tgcccagcca
     3721 cgcgtgcagt tcgcgcgggg tttggtgcag gctgtcgccc tgccgcatgg cgacggcgat
     3781 attggtttcg cgcacgagca tctgccattt tttccatgtg tgcagcttca tcaggctgtc
     3841 gctgcccatc agccaccaga gttgcgccga ggggaactgc tggcggaaaa tttggacggt
     3901 gtcgaaagtg taagtctcgc cccggcggac gatgtcgcag tcgctgacgg caaaacgcgc
     3961 atcttctgcc gtcgccaatt cgaccatggc aaggcggtcg gcggcggaag cggaggcggc
     4021 gtctttgtga tacgggccgc ctgtcggcag gaaaacaacc gcgtccaagc cgatttcgtc
     4081 ggcaaaggcg cgggcgatgt ggagatgccc gttgtgtatc gggtcgaaag tgccgccgaa
     4141 cagtccgatt ttcttcatga tgtttccatt ccttccgata agtccatgcc gtctgaaaca
     4201 ctgccgtcca caaccagcgt cagtttgccg gtaacgggat ggatgaccag tccgtgaacg
     4261 gcgatatggc gcggcatcag cggatggtta cggataaggt ccaccgtgtg gcgcacactg
     4321 tcttcgacgt tgtcgaaacc ggtcagccag ccgtcgaggt cgataccggc ataacgcagg
     4381 gtttcgatac ggtcttcggg aatctggctt tcccggacgc gcccgaggaa ttcttcggca
     4441 ttcagcccct gcataccgca atcgtgatgg gcgatgacca taatctctct gaccttcaat
     4501 tcaaacacgg caaccaaaag actccgcatc accgaacccc acgggtgcgt aaccagcgcg
     4561 ccggcatttt taatcagctt ggcatcgccg tttttcaaac ccaacgcgtc gggcagcagc
     4621 ccgataatcc gcgcatccat acaggacaaa actgccagcc cgcgttcggg gtatttgtcg
     4681 gtaaagtatt tttcatattc gcccgactcg acaaactgcc ggttatgggc aaggatgtta
     4741 tccaactcgc tcattttgcc gtcctctgaa aaagggttca cattataacg tttccgtctg
     4801 ttttccgcct tcgccgttgt ccaacagcag gaaaatgccc agcgcgaacg ccgacaacag
     4861 caatgtcaac accattgccc gcgcataatt atcctcaccc gcacgcccca aataggcata
     4921 aatcaaagtc gtcagcgtct gccactcggg acgcgacagg aacaaggttg ccgcaaattc
     4981 gcccacgcag gttgccgccg ccaaagtcag accgcgccgc aacgccggtt tcaagagggg
     5041 gaacgtgatg cggcatgccg tctgaaagcc gtttgcgccc aaacccgccg ccgccctgcc
     5101 gtaatccggc ggcagtgcgt cccaagccga caaaacatct tttgccacaa acggatacgc
     5161 cagcagcgca tacatcgcca gcagcaacgg caacgaagcc gtccactgcg gataaagcag
     5221 cagcacgccc gccgaaacac aaaccggcga caccataaac ggcaaaaaca tcagcccgcg
     5281 catccacgcc gaccgccgcg ccgccgccgc atacaccaca cccaaaaccg ccgccgcaaa
     5341 caccgccgcc gccgagaagc gcaaagtatt ccacaccgcc tgccacgttt cactttccat
     5401 taacacacgc cacgattcgc cggccgacca cgctttcaca acaattgcca acaaaggaaa
     5461 caggcagcac acagacaaca cctccgccgc aaacgccagc agcacatatt ccccgaccga
     5521 ctgcggcggc gacggcatca caggggaaac cgccttatcc gaaaccgcgc gcctgccgaa
     5581 ccacgcatac agcaaccctg ccgccgccgt tacccccaac accagccaca ccagcaccga
     5641 agcaaccgcc atatcgagtt cgaacatgac caactggtaa atttccactt cgaccgtggc
     5701 ataacggctg ccgcccagca gcagcgccag cccgaacccg gaaaaacaat acagaaagac
     5761 aaggcacacg ccgccggcaa gccacgggcg caaaacgggc atttcaatgt cccaaaaccg
     5821 ccgccacgcc cccgcgccca acgtccgtgc cgtctgaagc cgtgccgcag gcacttgcac
     5881 aaacccctga tacgccgccc tgaccaacac aggaaggttg aaaaacacat tgccgtacaa
     5941 caacagatac ggcgtatcct gccgtccgcg ccacaacagg ccgtccgccc caaacagagc
     6001 cagcacgccc acgcccgcca ccaacgtggg catcacaaaa ggcagcatca gcaggcgcag
     6061 caccaaagcc cgccccggaa acgccagccg cgccagcacc cacgcgacag gcacgcccaa
     6121 aggcagcacc agcacacagg ttgccgctgc ctgaaatacc gtccacgcca aacgtttgag
     6181 catataggca tccgacagca ccgcgcgcca cgccaaaccg tcatacgccg ccaccgccca
     6241 caaaggcgca acgaccatta ccgccaaaaa agccgaaggc agcagggcaa aagcacccca
     6301 taccgcccaa cgccgtccat ccatcgcctt ccccacttga aacactgatg ttgcgattgt
     6361 acccaaaagc cccacatacc gtatatttca atccgactac ataccgtatc cgccttcctc
     6421 ccgccgtctg aaataaatcg ttcaaataaa caggaatata acttcagaca aacaacttac
     6481 cgcccgattt gtgctatcgt tttcgcacaa cttaaaaaaa cctgacaatt ttgtactttt
     6541 attacagaga aaggctttac aaatggacgg ctggacacag acgctgtccg cgcaaaccct
     6601 gttgggcatt tcggcggcgg caatcatcct cattctgatt ttaatcgtca aattccgcat
     6661 ccacgcgctg ctgacactgg tcatcgtcag cctgctgacg gctttggcaa ccggtttgcc
     6721 cacaggcagc attgtcaacg acgtactggt caaaaacttc ggcggcacgc tcggcggcgt
     6781 ggcgcttctg gtcggcctgg gcgcgatgct cggacgtttg gtcgaaacat ccggcggcgc
     6841 acagtcgctg gcggacgcgc tgatccggat gttcggcgaa aaacgcgcac cgttcgcgct
     6901 gggcgttgcc tcgctgattt tcggcttccc gattttcttc gatgccggac taatcgtcat
     6961 gctgcccatc gtgttcgcca ccgcacggcg catgaaacag gacgtactgc ccttcgcgct
     7021 tgcctccatc ggcgcatttt ccgtcatgca cgtcttcctg ccgccccatc cgggcccgat
     7081 tgccgcttcc gaattttacg gcgcgaacat cggccaagtt ttgattttgg gtctgccgac
     7141 cgccttcatc acatggtatt tcagcggcta tatgctcggc aaagtgttgg ggcgcaccat
     7201 ccatgttccc gttcccgaac tgctcagcgg cggcacgcaa gacaacgacc tgccgaaaga
     7261 acctgccaaa gcaggaacgg tcgtcgccat catgctgatt cccatgctgc tgattttcct
     7321 gaataccggc gtatcggccc tcatcagcga aaaactcgta agtgcggacg aaacctgggt
     7381 tcagacggca aaaataatcg gttcgacacc gatcgccctt ctgatttccg tattggtcgc
     7441 actgtttgtc ttgggacgca aacgcggcga aagcggcagc gcgttggaaa aaaccgtgga
     7501 cggcgcactc gcccccgtct gttccgtgat tctgattacc ggcgcgggcg gtatgttcgg
     7561 cggcgttttg cgcgcttccg gcatcggcaa ggcactcgcc gacagcatgg cggatttggg
     7621 cattcccgtc cttttgggct gtttccttgt cgccttggca ctgcgtatcg cgcaaggttc
     7681 ggcaaccgtc gccctgacca ccgccgccgc gctgatggct cctgccgttg ccgccgccgg
     7741 ctttaccgac tggcagctcg cctgtatcgt attggcaacg gcggcaggtt cggtcggttg
     7801 cagccacttc aacgactccg gcttctggct ggtcggccgc ctcttggaca tggacgtacc
     7861 gaccacgctg aaaacctgga cggtcaacca aaccctcatc gcactcatcg gctttgcctt
     7921 gtccgcactg ctgttcgcca tcgtctgaca gacggaaagg atagtaaatg actacgcatt
     7981 ttgtcgttat gggcgtatgc ggctgcggca agaccaccgc cgcgctgtcc ctgcagaaac
     8041 acctcggtca atgtccctat gccgaaggcg acgagttcca cacccaagcc aaccgcgaca
     8101 agatgggcgc gggtattccg ctgaccgatg aagaccgcta tccgtggttg ggcaatctgc
     8161 gcgactggat gacgcaacag gcgcaaaacg gtgcgaacca caccatcgta acctgttccg
     8221 ccctcaaacg cggctaccgc gacattctgc gcggagccga aggcaaagct gccttcatcc
     8281 acctcagtcc gccgcaagac atcaacctcg agcgcatgat gtcgcgcaaa ggacattaca
     8341 tgaaagcagg gatgctcgat tcgcaactgg aaatcctcga ggaactgggc gaaggcgaat
     8401 acggggtcaa aatcgccaac cccggcacgc ccgaagcggt cgaagccgat attctgaact
     8461 gggttgcctc ggaaaacctg ctttgaagca atatgccgtc tgaagcccga cacaggatgg
     8521 gtttcagacg gcataaacat cgggaacaga atggattaca ttgatttata gtggattaac
     8581 aaaaaccagt acagcgttgc ctcgccttag ctcaaagaga acgattctct aaggtgctga
     8641 agcaccgagt gaatcggttc cgtactatct gtactgtctg cggcttcgtc gccttgtcct
     8701 gatttttgtt aatccactat aaaatggaaa atacccggct atcgtctcat tttcgtttta
     8761 atcagccata aaaatgccgt ctgaaaccct ttcagacggc atttctgtca aacgccggac
     8821 gcactcaatc caaactcaac agcaggttgc ggaacgcgtt cgggtctttg ataaacgtca
     8881 tctcgcccgc ctgcggaaaa tgaaagtcca acaggcgcga cacccaaaaa cggatgcagc
     8941 cggcacgttg ggcggtcggg aaatacgcct tttcttcggc actcaagggg cgcacgccct
     9001 cataaccgcc gataaacacc tttttcaacg cctcatccaa cttattgtcc gccgtccttg
     9061 cccaatcgtt gaccgcaatc gccaagtcat acataaaatt gccccggcag gcataataga
     9121 aatcgatgaa acccgatacc tgaccgccgt caagcaacac attgtcttta aacaaatcgg
     9181 catggatgat gcccgaaggc agatgattgc cgagattgtc ctttaacgca tcgatttcgg
     9241 aacacagcag cgcggcatcg tcttgcgaca ggacgggcag cagccgggtg cacgcctccg
     9301 tccaccacgc atcgtaacgc gggttttcca tttccaaagg gaaatcggcg gcggcaaggt
     9361 gcattttggc cagcatcgca ccggtatgga aacactgctc cgccgtcggc agcgcggtat
     9421 ccgaaccttt caggcaggca accaaacaag ccggcttgcc cgccaaaacg gaatcaagcc
     9481 ggccgtcttt gcgcgcaacc ggcgcggcaa ccgccacgcc cttcatactc aaatgccggt
     9541 taagctccag aaaaaacggc agctcttcct gtttcaacac ttcaaacacg gtcagcacat
     9601 aacgtcccga agtcgtcgtc agaaaataat tgctgttggt aatcccctgc gcgatgccct
     9661 gcagggaaac aaattccccc aaatcgtaac cgctcaggaa gccgcgcatt tcatcatcgg
     9721 aaacactggt atagacagac atatcaactc acttgctcaa aaacgggcaa acccgccgtc
     9781 agaacgccgg acggcaggca aacatataat tcacatcggt cgaatcgcac agggcataag
     9841 tttgcgacaa cacatggtaa gtcataccct tcgtatccgc cacatccaag cctgcctgac
     9901 ggcacattcg cgccagctcg gcaggtgcga tgaatttttt ccagtcgtgc gtgcctttgg
     9961 ggacaaactt caacagatat tccgccgcca caatcagatg caggtacgat ttcgggtttt
    10021 tattgatggt ggaaaaaaac accatgccgt ccggcttgac cagcttggca caagcacgca
    10081 cgatggcggc gggatcgggg acgtgttcca tcatttccat gcacgttacc acatcgaacg
    10141 agtgcggttc cgcctcggca aggtcttcca cgcggataca ttcgtattcg atatcggcga
    10201 cattgttcaa agccgcgtgc aggcgggcgg tttccaacga ctgctccgcc atgtcgatgc
    10261 cctttacaaa cgccgcgccg cgccgtgcca tactttccgc caagatgccg ccgccgcagc
    10321 ccacgtccaa aacccgtttg ccgcacaaat ccgcgtgccc gtcgatataa tccagccgca
    10381 gcggattgat gtcgtgcaag gttttgaact cgcccgactt gtcccaccat ttgtcggcaa
    10441 tccggctgaa tttggcgatt tccccctcat cgacattata ttttttgtcg gacattttcc
    10501 ctcccatctg acgaaccgcc cactccaaaa cccaagatta tactatggaa cacaatgccg
    10561 tctgaaagcc ttttcgggcg gcgcggcgca aatgccttac aaatccttac actttacggc
    10621 ataatggcgg ctcgcttttt ctggcagaaa gacaaaatat gcccaccaaa accccttcac
    10681 tgttcggcgg cgcgatgatt atcgccggca cggtcatcgg cgcaggtatg ctcgccaacc
    10741 cgaccgccac atccggcgta tggtttaccg gctcgctggc cgtgttgctg tacacctggt
    10801 tttccatgct ctccagcggc ctgatgattt tggaagtcaa cacccactac ccccacggcg
    10861 cgagcttcga caccatggtt aaagacctgc tcggacggag ctggaacatc atcaacggca
    10921 tcgccgtcgc cttcgtttta tacctgctta cttacgctta tatcttcgtc ggcggcgacc
    10981 tgaccgccaa aggcttaggc agcgcggcag gcggcaatgt ttcactcacc gtcggacaac
    11041 tcgtcttctt cggcattctc gccttttgcg tatgggcatc cgcacgcttg gtcgaccgat
    11101 tcaccagcgt cctcatcggc ggcatggtat taacctttat ttgggcaacc ggcggcctga
    11161 ttgccgatgc caaactgccc gtcctcttcg acacccaagc ccctaccggc accaactact
    11221 ggatttatgt cgccaccgcc ctgcccgtct gccttgcgtc attcggtttc cacggcaacg
    11281 tctccagcct gctcaaatac tttaaaggcg acgcgcccaa agtggctaaa tccatctgga
    11341 cgggcacact gattgcgctg gtaatttacg tcctctggca aaccgccatc caaggcaacc
    11401 tgccgcgcaa cgagttcgcc cccgtgattg ccgccgaagg gcaagtctcc gtcctgattg
    11461 aaaccctgtc caaattcgcc caaaccggca atatggacaa aatattgtcc ctgttttcct
    11521 atatggcgat cgccacctcg tttttaggcg taacgctcgg actcttcgac tacatcgccg
    11581 acatcttcaa atggaacgac agcgtgtccg gccgcaccaa aaccgccgcg ctgaccttcc
    11641 tgccgcctct aatttcctgc ctgctcttcc ccaccggctt tgttaccgcc atcggctacg
    11701 tcggcctggc ggcaaccgtc tggacaggca tcatccccgc catgctgctc taccgttcgc
    11761 gcaaaaaatt cggcgcaggc aaaacctata aagtttacgg cggcttgtgg ctgatggttt
    11821 gggtcttcct tttcggcatc gtcaacatcg ccgcacaggt attgagccaa atggaactcg
    11881 tccccgtatt taaaggataa aggcaaaatg ccgtctgaag cccgccggcg gcttcagacg
    11941 gcattgcctc gttatcacgc ggcacaggcg catcactgcc gatatttcag tataatgcca
    12001 cccccgacct gccccaatcc aaaggaaacg cgatgaaact catcattctc gaccgcgacg
    12061 gcgtcatcaa tcaggaccgc gatgacttcg tcaaatccgt tgacgagtgg atacctgtcg
    12121 aaggcagcat ggatgcggtg gcatttctga cgcaggcagg ctacaccgtc gccgttgcca
    12181 ccaaccaatc cggcatcggg cgcaaatatt ttaccgttca aaaccttacc gaaatgcacg
    12241 ccaaaatgca ccgcctcgtc cgtcaggcag gcggcgaaat caacggcatc tggttctgcc
    12301 cgcacaccga tgccgacaac tgcaactgcc gcaagcccaa accgggtatg attgaagaca
    12361 tcatcggacg cttcaacgcc caagcctcgg aaacctggct ggtcggcgac agcctgcgcg
    12421 atttgcaggc aatcgatgcc gtcggcggaa aacccgcgct ggttctgacc ggaaaaggca
    12481 aaaaaacgct ctcccaacac ggacacgaat tacccgaaca cacacaggtt ttcgatacct
    12541 tgctcgattt ctcacaatac atcatgcagg aaaacgccgc accgcaagcc gactgaacat
    12601 accgcatttc cgacaaggca aaaccatgct catcatccgc aacctgattt actggctgat
    12661 actctgttcc accctgattt tcctctttcc ctttatgctg ctcgcctcgc ctttccggga
    12721 cggggcgcac aagatggcgc gggtctgggt caaaatcctc aacctctcgc tcaaacacat
    12781 cgtcgggctc aaataccgca tcatcggcgc ggaaaacatc cccgaccgcc ccgccgtcat
    12841 ctgcgccaaa caccaaagcg gctgggaaac gcttgccctt caggacattt ttccgccgca
    12901 ggtttacgtt gccaaacgcg agctgttcaa aatccccttt ttcggctggg gtttaaaact
    12961 ggtcaaaacc ataggcatag accgcaacaa ccgccgcgaa gccaacgaac agctcataaa
    13021 acaggggttg gcgcgcaaaa acgaaggcta ttggattacc attttccccg aaggcacgcg
    13081 ccttgcgccc ggaaaacgcg gcaaatacaa actcggcggc gcgcgcatgg cgaaaatgtt
    13141 tgagatggac atcgtccccg tcgccctcaa cagcggcgaa ttttggccga aaaactcctt
    13201 tctgaaatat ccgggggaaa tcaccgtcgt catctgtccg accatcccgc acgcaagcgg
    13261 cagcgaagcc gaattgatgg aaaaatgcga acacctcatc gaaacgcagc agccgctcat
    13321 ttccggcgca ggcccgtttg ccgccaaaat gccgtctgaa accgtatgac ctccctgatc
    13381 cacactcttt ctgacggcat ggaactgact atagaaatca agcgccgtgc caagaaaaac
    13441 ctgattatcc gccctatcgg cacacatacc gtccgcatca gcgtcccacc ctgcttctcc
    13501 gtctccgctc taaaccgctg gctgtatgaa aacgaagccg tcctgcggcg aacactggcg
    13561 aaaacaccgc cgcaaactgc cgaaaaccgg ctgcccgaat ccatcctctt ccacggcaga
    13621 caacttgccc tcaccgccca tcaagacacg caaatcctgc tgatgccgtc tgaaatccgc
    13681 gttcccgaag gcgcacccga aaaacagctt gcgctgctgc aggacttttt ggaacggcag
    13741 gcgcacagtt acctgattcc ccgcctcgaa cgccacgccc gcaccacaca actgttcccc
    13801 gcctcctcct cgctgacctc tgccaaaacc ttctggggcg tgtgccgcaa aaccacaggc
    13861 atacgcctca accggcggct ggtcggcgca ccggaatacg ttgccgatta tgtctgcata
    13921 cacgaactct gccacctcgc ccatcccgac cacagccccg ccttttggga actgacccgc
    13981 cgcttcgccc cctacacgcc cgaagcgaaa cagtggctca aaatccacgg cagggaactt
    14041 ttcgccttag gctgacgcgg tcccgggccg gcatccgcca attcagacct cctcccaaac
    14101 ggacatccgg aaagcagcat cacagccggc gacacatacc gctgccgccg ctttcagacg
    14161 gcatccgtgc cggaacaggc acgcgcccgc ccgattcaaa ccgcgatgac gctttgccgc
    14221 cggttcgggg caggatggcg gcacacgcgc cgtctgccgc gtttcatttc acaccgctct
    14281 tccgaaaccc gagacccgcc cggtccgacg tgcggtatga aacgcttaag ctggcgcgaa
    14341 gtcttttact gatttgcccg cgaaaatgcc gtctgaaagg ttttcggacg gcattttttt
    14401 gcgtttccca ggatggcggc ggattcgtaa aaggcggtca gggtggattg taggatgggt
    14461 tgagacctgc cgaatccgcc gcatctgcca aatctaccgc cgtcattcct acgaaagtgg
    14521 gaatctagaa cgcggggtta agaaaacctg catcccgtca ttcccacgaa agtggggatc
    14581 cagttttttg agtttcagtc atttccgata aattgcctta gcattgaatg tctagattcc
    14641 cgcctgcgcg ggaatgacga atccatccat acggaaacct gcaccgcgtc attcccacga
    14701 acctgcattc cgtcattccc acgaaagtgg gaatccagtt ttttgagttt cagtcatttc
    14761 cgataaattg ccttagcatt gaatgtctag attcccgcct gcgcgggaat gacgaatcca
    14821 tccgtacgga aacctgcacc gcgtcatgcc tacgaaccta catcccgtca ttcccacgaa
    14881 agtgggaatc cagttttttg agtttcagtc atttccgata aattgcctta gcattgaatg
    14941 tctagattcc cgcctgcgcg ggaatgacga atccatccat acggaaacct gcaccgcgtc
    15001 attcctacga acctacattc cgtcattccc acgaaagtgg gaatccagaa tcccagactt
    15061 tcagataatc tttgaatatt gctgttgttc taaggtctag attcccgcct gcgcgggaat
    15121 gacgggattt gaggtttctg ttcgcgtcat tcccacgaac ctgcatcccg tcattcccac
    15181 gaaagtggga atctagtttt gtcggtgcgg aaacttatcg gatatagtgg attaacaaaa
    15241 atcaggacaa ggcgacgaag ccgcagacag tacaaataat acggaaccga ttcactcgtg
    15301 cttcagcacc ttagagaatc attctctttg agctaaggcg aggcaacgcc gtactggttt
    15361 ttgttaatcc actataaaat ggtttcttta gattttacgt cctagattcc cgactgcgcg
    15421 ggaatgacga ttcgggcact cctgacaggg tgaattcaca ggatagcgat tcgtagcaac
    15481 tgcatccccc ccccaactcc ccaaacaacg ccgctcgccc tgggcgtttg ccgtttccct
    15541 gcaaaatctg cgatacaatg cagtctgaac atttatccga atcccaaatc cgatggatac
    15601 cgcacaaaaa caacgctggg caataaccct atcctatgac ggcagccgct tttacggctg
    15661 gcagaaacag gcgggcggcg tac
//
LOCUS       DBBZXW010000037        15505 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.037, whole genome shotgun sequence.
ACCESSION   DBBZXW010000037 DBBZXW010000000
VERSION     DBBZXW010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15505
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.037"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(51..536)
                     /locus_tag="ACJJD2_001068"
     CDS             complement(51..536)
                     /locus_tag="ACJJD2_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HGG7579623.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
     gene            complement(866..1174)
                     /locus_tag="ACJJD2_001069"
     CDS             complement(866..1174)
                     /locus_tag="ACJJD2_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579624.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(1158..1460)
                     /locus_tag="ACJJD2_001070"
     CDS             complement(1158..1460)
                     /locus_tag="ACJJD2_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HGG7579625.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(1534..3897)
                     /gene="pheT"
                     /locus_tag="ACJJD2_001071"
     CDS             complement(1534..3897)
                     /gene="pheT"
                     /locus_tag="ACJJD2_001071"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HGG7579626.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVIAEVKSVEKHPDADRLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAMERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAAHGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3922..4572)
                     /locus_tag="ACJJD2_001072"
     CDS             complement(3922..4572)
                     /locus_tag="ACJJD2_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HGG7579627.1"
                     /translation="MITISNEDNMILMSRYPDKYFDLAIVDPPYGILNKTKRGGDYKF
                     NMNEYSQWDIKPDQTYFNELFRVSKNQIIWGGNYFGELWLRSEYNKGFIIWDKNQPET
                     LNNFSMAEMAWSSFDRPSKIFRFSVRKNRNKTHPTQKPVELYQWLLKMYAKQGDKILD
                     THLGSGTLAIACCIAQFDLTACEINSDYYQQSIEKIKNNLPEARISFGHPGYCIIE"
     gene            complement(4569..6038)
                     /locus_tag="ACJJD2_001073"
     CDS             complement(4569..6038)
                     /locus_tag="ACJJD2_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HGG7579628.1"
                     /translation="MTTARWVIDKHLQNFHILCKFAGILKTNSFISVEDKAKLSEKLE
                     KLDLYHRRNTGKSLDATTHKIKELSFYMFGYRDVCGQVTQKFLFSPLGNLFLKHLDNN
                     EYIQKIFLTMLWAIPFPHPYIKTDESIQLYPMRLIFKLLSDERLDCKLFSYEYIYLIS
                     FVKSADQNSYEKLVQDILVLRTCAEVKIKHQLTAENSRSHAYVNAAHEWESYFSKTLT
                     DAGVLQKTDGKIICRLKHGKTETYRKVTSSEFSIPKQLQEFVKKLQSAYSFSEMPLNL
                     NDSDRLKIDVIKEIYSFYPKELLEEIGELKDEAAYELLHLPRLIEQYADNNNGTEAYL
                     FEDVLEMGFNMFYNVEAKKIGGPGNTDLECLYITQKRKFAVEAKSTKNKLSGINSGRL
                     EDHKNKIKAIYTIVVTPRYVPAVLSDIRNCPIVIIRANTFAEFLYNCLINRSSIPEID
                     YRYFDEIIIKNLGKDISSEISNLTMQQFASNTTMEAYST"
     gene            complement(6041..7099)
                     /locus_tag="ACJJD2_001074"
     CDS             complement(6041..7099)
                     /locus_tag="ACJJD2_001074"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7579629.1"
                     /translation="MMIGASLFSSAGIAETYLHNAGIKIIAANELVPERANLYKALYP
                     ESKMIIGDILHEEVFQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHL
                     IFRVIEFILLKRPTFVLIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFD
                     SADYGVAQHRKRAIIRMNKHSTIWGMPEKVTKTISVRDAISFLPSIESGQKSNVKWHF
                     ARTHAPEHIIWLKNTPTGRSAFDNIEHYPKKKNGEKIKSYNTTYRRMEWDAPAPTITI
                     RNDAISSQLNVHPGRSMPDGTYSDARVLTPLELMLLTSLPIDWNIPDDTSELLIRQCI
                     GESIPPLLIKKIVERIGK"
     gene            complement(7282..8274)
                     /gene="pheS"
                     /locus_tag="ACJJD2_001075"
     CDS             complement(7282..8274)
                     /gene="pheS"
                     /locus_tag="ACJJD2_001075"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HGG7579630.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
     gene            complement(8620..8979)
                     /gene="rplT"
                     /locus_tag="ACJJD2_001076"
     CDS             complement(8620..8979)
                     /gene="rplT"
                     /locus_tag="ACJJD2_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HGG7579631.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(8992..9189)
                     /gene="rpmI"
                     /locus_tag="ACJJD2_001077"
     CDS             complement(8992..9189)
                     /gene="rpmI"
                     /locus_tag="ACJJD2_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HGG7579632.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(9336..9857)
                     /gene="infC"
                     /locus_tag="ACJJD2_001078"
     CDS             complement(9336..9857)
                     /gene="infC"
                     /locus_tag="ACJJD2_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HGG7579633.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(9875..11788)
                     /gene="thrS"
                     /locus_tag="ACJJD2_001079"
     CDS             complement(9875..11788)
                     /gene="thrS"
                     /locus_tag="ACJJD2_001079"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HGG7579634.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(11842..11918)
                     /locus_tag="ACJJD2_001080"
     tRNA            complement(11842..11918)
                     /locus_tag="ACJJD2_001080"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11882..11884),aa:Val,seq:gac)
     gene            12097..13212
                     /gene="tgt"
                     /locus_tag="ACJJD2_001081"
     CDS             12097..13212
                     /gene="tgt"
                     /locus_tag="ACJJD2_001081"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HGG7579635.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLKGLEELDFPGLAIGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            13222..14304
                     /gene="hemH"
                     /locus_tag="ACJJD2_001082"
     CDS             13222..14304
                     /gene="hemH"
                     /locus_tag="ACJJD2_001082"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HGG7579636.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            14496..14918
                     /locus_tag="ACJJD2_001083"
     CDS             14496..14918
                     /locus_tag="ACJJD2_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7579637.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKKLNRQNAV"
     gene            complement(14961..15251)
                     /locus_tag="ACJJD2_001084"
     CDS             complement(14961..15251)
                     /locus_tag="ACJJD2_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579638.1"
                     /translation="MAKYFTETGIGVREHFDFFGEFVVSPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGGGNIGSMGLKVPR"
     gene            complement(15405..>15505)
                     /locus_tag="ACJJD2_001085"
     CDS             complement(15405..>15505)
                     /locus_tag="ACJJD2_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HGG7579639.1"
                     /translation="REKAYSRIEMQSDTVLQAGIWRGTSCPTARSI"
BASE COUNT         4106 a         3967 c         3292 g         4140 t
ORIGIN      
        1 tcaaaccgga aaaatgccgt ctgaaccttc agacggcatt ccattcacat ttattcgtct
       61 tttttgtgtt cgatggcgtt tcgggaacga ttgccgccgt aaggctcttc aaccgtatat
      121 tccccctcga taatatcgtc atcgcgggaa aagccctctt ttctgcccga ttggttcatg
      181 ttgaaaaaat tttccgcacc tcctgcctgc aacactgcac ctcccttaaa cggcagcagc
      241 agcaataccg ccaacaccga ggatacgaat cccggactca tcagacacac cgccgccacc
      301 gtataacgga taggccacaa catctgataa acggataccc tcccgccgct tctcattgcc
      361 gcacccgcca ataaaagacc ggacagcccc gtatgcctga gcatcagcac accggcggca
      421 aaggttgccg ccatcagaaa cagcgtccaa ccgccgccca gccaatcggc aacccacaca
      481 atcgacataa tctccaaaaa cagcagcacc aaaaaaccga taccgaaaaa tctcattgac
      541 cgtcatcctt atatttaagt aaacagcaaa ccgcccgaac aagactccaa gcgacctgcc
      601 tgtaaatgat tacaaaacca tgtgcttcaa gccgaaacaa tgtgaaatca cgcaatatag
      661 tggattaaca aaaaccagta cagcgttgcc tcgccttagc tcaaagagaa cgattctcta
      721 aggtgctgaa gcaccaagtg aatcggttcc gtactatttg tactgtctgc ggcttcgtcg
      781 ccttgtcctg atttttgtta atccactata attatttttt agcgtgtaaa acaaaaccgg
      841 ctgcatacct gcaaccggcc tcaaatcagc acaattcctt atccaaatcc gccaacagct
      901 ctttcagacc gtctccgatt tcctgaagcg taaccggacg gttgccgtcc gaacccgatt
      961 ccgcaccttc tgcatacggt gcaaacgtgc tctgcaattt caacagtttc accacatcca
     1021 aacgggtgta gcgttcgccg ccgtaaccga caaccacacc gtgatcatgc tgccattgcg
     1081 caaaaccata ggggctgatt tgcaacagtc cgcacaactc gtccagcgtg aaatagcgtt
     1141 ttgcgggaac cttcaaatca acgttgtttg tcatagtagt gttccaccat gcttttgagt
     1201 ttctggctgg catggaaagt taccacgcgg cgggcggtaa tcggcacttc ctcgccggtt
     1261 ttagggttac gacccgggcg ttgcggcttg tcgcgcaact ggaaatttcc gaaaccggaa
     1321 attttgattt cttcgccgct tgccaaagtg ctgcggattt cttcaaaaaa gagttcgacg
     1381 atttctttgg catcgttttt ggtgacgttg ctgactttgt ctaccaaaat atcggccagt
     1441 tctgctttag tgagagtcat atgattacct tctgttgtaa cagttgtgga ttattaccaa
     1501 tttttattta aaattcaagc gaatatttat tttttaactg cgaagccgcg cccctgccgc
     1561 cgttgccgcg ccaatcagtt ttccgataag cggctcgacc gcctcatccg tcagcgtgtt
     1621 ttccatatcc tgcaaaatca ctttgaccgc cacgctcttc atcccttcgg gcagtcccgt
     1681 gccgcgatac acgtcaaaca cgctgatttc ctgtaccaac ttgtttgccg cgcctttcaa
     1741 gacaagcagc aaatcatcat ggctcatagc ttccggcatc acaaacgcca aatcgcggcg
     1801 caccggctgg aatttcgata cggcccgata gcgcgttttc ccgcattcca acacggccgc
     1861 catatcgatt tcaaatacca gcggcgcttg cggcaggtcg tatttttgca gccatttcgg
     1921 atgcagttcg ccgacaaagc cgatgacttt gccgtctgaa acgatattgg cggcacgtcc
     1981 gggatgcagg gcgggatgtc cggttttaac gaactcgact gctttgtttt tcaacagatt
     2041 ttccacatct gccttaatgt cgtaaaaatc cgcattgcgc gttttcccac cccattgttc
     2101 gggcattgcc gcgccgtacc acagaccgcc gatgcgttcg ttttggacaa accggccgtc
     2161 tgaacctttg ccgaacacgc gggcgatttc aaacacgcgc acgcggtttt gtttgcggtt
     2221 caggttgttt tgcaaaattt ccaccaagcc gccgatgagt gtggaacgca tcacggcata
     2281 ttgcgccgcc agcgggtttt gcaggcggat ggggtcggcg ttggcggcaa aatcttgttc
     2341 ccactgctcg tcaacgaagg catagctgac cacttcgcgg tagccgtgcg ccgccatttc
     2401 gttgtaaacg gcaaaacgcg ggcggcgtgt ttcgggcagt tccagcattt tcagacggcc
     2461 tgacgtgtaa tcgtcgggga tgttttcata gccgtaaacg cgtccgattt cttcaatcaa
     2521 atcggcctca atttcgatgt caaaacggaa gctcggcgcg gtaacgcgga agccttccgc
     2581 cgttttctcg ggctgcaggc ccaagtgttg caaaatggtt tccacctgtt cggcaggaat
     2641 gtccacgccc aacacggttt tcagacggtc caaacgcagt ccgacctgct tggcttcggg
     2701 caatttacct tgtgcttcaa ccatctcgcc tgccgcaccg ccgcaaatct gcaacaccaa
     2761 ttcggtagca cgttccatgg catccgcctg caaacggtaa tccacgccgc gctcgaagcg
     2821 gaacgacgaa tccgaaccga aaccgtattg gcgcgatttg ccggcgatga tttcgggcgc
     2881 aaaccaagcc gcttccagca cgatattttg cgtgccgtct gaaaccgcgc tcgccgcgcc
     2941 gcccattaag cccgccaaac tcaacacgcc tttttcgtcc gccacgacca gcgtgttttc
     3001 agacagggaa acggttttct cgttcaggca ttccagcgtt tccccttcgc gcgcgcggcg
     3061 gatgtgcagg ctgccggaaa gtttgtcggc atcaaaaacg tgcatcggct gaccgatttc
     3121 cagcatcaca taattgccga tgtccaccag cgcggaaata ctgcggatgc cgctgcgctc
     3181 caaacgttgt ttcatccaat cgggagtagc cgctttcgca ttgacatttt caataacgcg
     3241 gctgataaaa cggccgcaat cggcaggcgc gttaatctgc acgggctgtt ttcgactgcc
     3301 cgtgatcggc gcggtatgga tttcgggctg cctgaacgcg caccccgtca atgcggacac
     3361 ttcgcgcgca atgcctttga tgctcaagca gtcggcgcgg ttaggcgtaa ttttcaacgt
     3421 aaacagcgta tcgtccaaat ccaagtattc gcggatattg gtaccgacgg gcgcatcttc
     3481 aggcagaatg tgcaggccgt ctacaccatc atcaggcaaa cctagttcat tggtcgaaca
     3541 cagcataccg tttgatggca caccgcgcat tttggtcggc ttgattttga aattacccgg
     3601 caaaacggca cccggcagcg aacacggcac tttgatgccc gctttcacat tcggcgcacc
     3661 gcacacaatc tgcaccaacc cgcccgtacc cgcatcaact cgggtaacgt tcaaacggtc
     3721 tgcatccgga tgtttttcaa cggatttcac ttcggcaatc accacgcccg caaacgcagg
     3781 cgcggcagtt tcagcctctt ccacttccaa gccggacatc gttaacagat gttccagctt
     3841 atcggaggaa agttcggtat cggcttgggt tttcagccat gagtaggaga attgcatggt
     3901 taatttctct atatttttaa gttattcaat aatacaataa cctggatgcc caaaactgat
     3961 tctagcttca ggtaaattat tttttatttt ctcaatcgat tgttggtaat aatcggaatt
     4021 gatttcacaa gctgtcaaat caaactgtgc aatgcagcat gcaatagcaa gagttccact
     4081 tcctaaatgt gtatctaaaa tcttatcacc ctgctttgca tacattttta acaaccactg
     4141 atataattcg actggttttt gtgttgggtg agttttatta cgatttttcc gcacactaaa
     4201 ccggaaaatt ttagatggcc tatcgaatga cgaccaagcc atttccgcca tagaaaaatt
     4261 atttaatgtc tctggttgat tcttatccca aataataaat cctttattat attcacttct
     4321 caaccataac tcgccaaaat aattcccacc ccaaataatt tgattttttg acacgcgaaa
     4381 taattcatta aagtaagttt ggtctggctt aatatcccat tgtgagtatt cattcatatt
     4441 gaatttataa tcaccaccac gtttagtttt attcaaaatc ccataaggag gatctacaat
     4501 tgccaaatca aaatacttgt caggataccg agacattaag atcatgttat cttcatttga
     4561 aatagttatc atgtactata cgcttccatt gtggtgttac ttgcaaactg ttgcatagtc
     4621 aaattggaaa tttctgaact aatatctttt ccaagatttt taataataat ttcatcaaaa
     4681 taccgataat caatctctgg aatactggag cgattaatca aacaattata taaaaattca
     4741 gcaaatgtat tggcacgaat aattacaatt gggcaattac gaatatcgga taatacggca
     4801 gggacataac gtggtgtgac aacaattgtg taaatggcct taattttatt tttatgatct
     4861 tccaatcttc ctgaattaat acctgataac ttatttttag ttgattttgc ctccactgca
     4921 aattttctct tttgcgtaat atataagcac tctaaatccg tattacctgg tccaccaatt
     4981 tttttagctt ctacgttata aaacatattg aaccccattt ctagaacatc ttcaaataga
     5041 tatgcctctg ttccattatt attatctgca tattgttcaa tcaacctagg taagtgcaat
     5101 aattcatatg ctgcttcatc cttaagctca ccaatttcct ccaataactc ttttggatag
     5161 aagctataaa tttccttaat gacatcaatt ttcaaacgat cactatcgtt cagatttaat
     5221 ggcatttctg aaaacgaata agcactttgc aattttttca caaattcctg aagttgctta
     5281 ggaatcgaaa actcacttga tgttacttta cgatatgttt cggtcttacc atgctttaga
     5341 cggcaaataa ttttaccatc tgttttttgc aaaacacctg catcagtcaa tgtttttgaa
     5401 aaataagatt cccactcatg tgctgcattt acataagcat gactacgact attttccgca
     5461 gttaattgat gtttaatttt tacttcagca catgttcgta acaccaaaat gtcttgtact
     5521 aatttttcat agctattctg atcagcagat ttcacaaatg aaattaaata gatatattca
     5581 taagaaaata gtttacaatc caatctttca tcagataaca acttaaatat tagtctcatg
     5641 ggatataatt gaatactttc atcagtctta atgtacggat gaggaaatgg tatcgcccac
     5701 aacatagtaa gaaaaatttt ttgaatatat tcattattat ccaagtgttt caaaaataaa
     5761 ttacccaatg gactgaacag gaatttctgt gtaacttgcc cacacacatc acgataacca
     5821 aacatataga atgataattc ttttatttta tgagtagtag catccaatga tttacctgta
     5881 tttcgtctat ggtataaatc tagtttttcc aatttttcag ataacttagc tttatcctct
     5941 acagatataa aagaatttgt tttcaaaata cctgcaaatt tacataaaat atgaaaattc
     6001 tgtaaatgtt tatctattac ccagcgcgca gttgtcatat ctattttcct attctctcta
     6061 caattttttt aattaacaat ggaggaatag attcaccaat acattgccga attaataatt
     6121 ctgatgtatc gtcgggaata ttccaatcaa taggtaatga tgttaaaagc attaactcta
     6181 atggtgttaa aactcttgca tctgaatatg ttccatcagg catagaccgt ccaggatgaa
     6241 catttaattg tgaactgata gcgtcattac gaatagtaat agttggggca ggagcatccc
     6301 actccatacg gcgataagtt gtattataac ttttaatttt ttcaccattt tttttctttg
     6361 gataatgttc tatattatca aaagcagatc gtcctgttgg cgtatttttt agccatataa
     6421 tgtgctccgg agcatgtgta cgtgcaaaat gccatttcac attagacttt tgtccagact
     6481 caatactagg caaaaaacta atagcatcac gaacagaaat ggtttttgta actttttccg
     6541 gcattcccca aatagttgaa tgtttattca tacgaataat agctcgttta cgatgttgtg
     6601 caacaccata atcggcagaa tcaaaaatat gagtttgaat ataatattcg caaccaaata
     6661 aatcttgcaa aattacttct actgtttgta atgtcccctt ataaggtaac ttaattttta
     6721 aaaaaaatgg aacattttca atcaaaacaa aagttgggcg ttttaataaa ataaattcga
     6781 ttactctgaa tattaaatga ttacgtttat cattagccat ctcttgaatg ttacgatttt
     6841 tccctgcaac actcatgcct tgacaaggag gagaagcaat taaaaaatct aatcgattcg
     6901 gcacgctctg tattaaattt tgaaacactt cctcatgaag tatatcacct ataatcattt
     6961 tactttcggg atatagagct ttatataaat tagcacgttc tggcaccaat tcatttgcag
     7021 ctataatctt aatacccgca ttatgcaagt aggtttctgc aatccctgca ctcgaaaaca
     7081 aagaagcccc tatcatcata gaaccaaacc caaattaact atataatctc tacaaagcaa
     7141 taaattatgc ctctttaaac aaaattagga atgtaatttc acaacaaaat atcaaatgtt
     7201 ttatatctta catttgaatt ttcctaagca gcctgaaaac caagagtagg ctgcttttcc
     7261 atattcaggc agcctacaca atcattttac aaactgcttc aaaaaattca aatcgttatc
     7321 aaaaaacaag cgcaaatcgt tcacgttgta acgcagcatc gcgaaacggt cgagaccgat
     7381 accgaaagcg aaaccggtgt atttttcaga atcgatattc acatttttca acacgttggg
     7441 atgcaccatg ccgcagccgc cgacttccag ccatttgccg ttttcgccca taatgtcgat
     7501 ttcggcagac ggttcggtga acgggaagaa agacgggcgg aaacgtactt gcaaatcatc
     7561 gcgttcaaag aagcgacgga taaaatccgt gaacactgct ttcaaatcgg caaaagttac
     7621 gccctcttct acccacaaac cttccgcctg atggaacata ggcgagtgcg tggcatcgct
     7681 gtccacacgg taaacgcggc cgggggcgat aatgcggatg ggcggctctt ttttatcgag
     7741 catatagcgg atttgaatcg gggaagtgtg cgtacgcaaa acatcaccgt tttcaacgta
     7801 aaacgtatcc tgcatcgcac gggcaggatg gtttgcaggg atgttcaggg cttggaaatt
     7861 gtgaaaatcg tcttcgattt caggcccgtc cgccacttcg aaacccattc cgtgaaagag
     7921 ttcgaccaca cgttgcaagg tcagggttac gggatgcagg ctgccgcctt cctgagcgcg
     7981 tccgggcagg gtaatgtcga gggcttcggc ggcaagtcgg gcttgcagct tggcttcgtt
     8041 gagggcatcg cgtttggcat taaaagccgt ctgaaaccgg tttttgcatt cattgatatg
     8101 cgcacctatg gttttgcgct cttcaggcga catttgcccc aaagttttca gaagtccggt
     8161 caactcgccg gttttgccaa gataacgggc tttgatttgt tctagagcgt tgaagtcttg
     8221 cgcagcttct actgcggcaa tgccttctgc aacgatgcgg tttacatttt ccataatatc
     8281 aagtctgtca attaatgata tgccacctga aacaacgagg ccgcctgtat agcctgacat
     8341 atcagactct tcagacgacc ttattttctt cacggtcaat ccattggata aattttctgt
     8401 atagtggatt aaatttaaac cagtacggcg ttgcctcgcc ttgccgtact atctgtactg
     8461 tctgcggctt cgtcgccttg tcctgattta aatttaatcc actatatttt aacgcaaatt
     8521 tatttaaaaa aatagacttt aaagaaagaa aatcaatcac atagaatttc tgcaaacaaa
     8581 gaaaaaagga agccgcagct tccttttcaa ttttttggat taagcagcca aagcagcttt
     8641 ggctttttca accaattgtg caaaagcggc tttatcgaac acggccaaat cagccaatac
     8701 tttgcggtcg atttcgatag aggcgcgttt cagaccattc ataaatttgc tgtaagacaa
     8761 cccgttttca cgcgcacctg cattgatacg gacaatccac aattgacgga attggcgttt
     8821 gcgttggcgg cggtcgcggt atgcgtattg gccggctttc attaccgcct gcttggcaac
     8881 gcggtaaacg tttttacgac ggccgcgata gcctttggct aacgcgaaga ttttttggtg
     8941 acgggcacga gcggtaacac cgcgttttac gcgtggcata ttctaaactc cttaagcgta
     9001 gggtaacatt ttagcaacag aagccaaatc gcgatcattt accatagagg taccgcgcag
     9061 ttggcgtttg tttttggtgg tctttttagt caagatgtgg cgtttgaacg catgagcgcg
     9121 tttcacaccg ccgttaccca gtactttaaa gcgttttttc gcgctagact tggttttcat
     9181 tttaggcatg ggaaaactcc attcgttatc ggataaggca ttagggggtt ttaaaacatc
     9241 ggtttcaaac acttgaaccc acaatgccac ggttttttgc cgcaattgaa aacttactcc
     9301 gaagcggcaa tcggagtaag cggagaatta tagctttatt ttttcttcgg cgcaatcatc
     9361 atcaccattt ggcgaccttc cattttggga aaggactcga tttgcgccac ttcagccaaa
     9421 tcttctttta cacgttccaa aagttgcgcg ccgagttgct ggtgagccat ttcacggccg
     9481 cgaaaacgca atgtcacttt gactttatcg ccgtcggcaa ggaagcggtt aatgttgcgc
     9541 atcttgattt gataatcgcc ctcatccgta cccggacgga atttgatttc cttgatttgc
     9601 acctgctttt ggtttttctt ggcttcgtcg cgcttcttgg cttgttggta tttgtattta
     9661 ccgtaatcca tcagtttgca cacaggcggt ttagcagttg gggaaatctc taccaaatcg
     9721 acatcctgcc cttcggccat agccaaagct tcacgaactg aaacgacacc aagctgttcg
     9781 cctgactcac tgattaaacg cacttctttg gcggtaattt cgccgttgat tcgtgcttcg
     9841 cgttcttgag cgatgatgaa tactcctata aaaattaatg attgacgagg gcatcagtga
     9901 tttcttgctg caattgcgca atgaaatcat ccaaatccaa agaacccaaa tcttctgctt
     9961 tgcggcgtac cgccactttg ttttcctgct tctccttatc gccgacaacg atttgataag
    10021 ggaaacggta ttggctgttg tcgcggattt tgtaaccgat tttttcgtta cgcaaatcca
    10081 actcggcgcg gaatcctgcc gcctgcaatt tggcagccac ttcacggcag taatccgctt
    10141 gattttcggt gatattcata atcaccattt gaaccggcgc caaccataac gggaatgagc
    10201 ctgcatggtt ctcaatcaga atgccgataa accgctccaa agaacccaaa atggcgcgat
    10261 gcaacataac aggacgcgca cggtcgttgt tttcagttac atattcggca ttcaaacgct
    10321 ccggcaatac gaaatccagt tgtaatgtac cgcattgcca agaacgaccc aaggcatctc
    10381 tgacatgata ttcgatttta ggcccgtaaa acgcaccctc gcccggcaat tcgccccatt
    10441 ccacgccgca ggcagtcaat gcctcgcgca aaccctgctc tgccttatcc cacacgtcat
    10501 ctgaacctgc gcgtttttca gggcgaagag aaagcttgac ggatacatca tggaaaccga
    10561 actgtttgta gatgcgaacc aacaattcat tgaacgcacg ggcctcgctg acgatttggt
    10621 cttcggtaca gaaaatatgc gcatcatcct gcacaaatcc acggacccgc atcagaccat
    10681 gcaatgcacc gcttggttca ttgcggtggc aagaaccgaa ctcggccaaa cgcatcggca
    10741 aatcgcgata tgagcgcaaa ccgttattaa aaatttgcac atgacccgga cagttcatcg
    10801 gtttcaccgc gtattcgcgt ttttctgaac tggtcacgaa catattgtct ttgtagttgt
    10861 cccaatggcc ggatttttcc caaaaggttt tatccataat ttgaggcgtt ttgacctctt
    10921 tataaccggc ggcgttcagc tctttacgca tatgctgttc aatcacttgc cacaaagccc
    10981 agcctttagg atgccaaaac accatgcccg gcgcttcgtc ttgcagatgg aacagatcca
    11041 attgcttgcc aagtttgcgg tggtcgcgct tttcggcttc ttcgatacgt tgaatatagg
    11101 cttttaattc gtcttttgtc gcccaagccg taccgtatat gcgttgcagc atttcattat
    11161 tgctgtcgcc gcgccagtat gcgcccgcca acttggtcag tttgaagttt ttcaggaaac
    11221 gggtattcgg aacgtgcggg ccgcggcaca tatcgacata ttcctgatga tgatacatcc
    11281 ccatcgcttc cacttcgggc atatcgtcaa tcaggcgcag tttgtattct tcgccgcgct
    11341 cttgaaaaat tttaatcgcc tccgcacgcg gagtcatgat tttgaccaca tcatagtctt
    11401 gggcaatcaa ttctttcata cgcgcttcaa tggcggcaac atcttccggt gtaaacggtt
    11461 tttccgtggc aatgtcgtaa taaaagccct cttcaatgac ggggccgata accatttttg
    11521 cattaggata gagttgcttg acggcatgcc cgacaagatg ggcgcaggaa tggcggatga
    11581 tttcgatgcc ttcctgatct ttcggagtaa tgatttgaac agcagaatct tcaacaatcg
    11641 ggtcgcacgc atcgaccaat ttgccgttta ccctgcctgc caccgccgcc ttcgccaaac
    11701 cggcaccgat agacgcagca atttgagcca cggtaacggg ggattcgtat tgtcggactg
    11761 agccgtccgg caaggtaatg ttcaacatca aaaagctcca aaacattaaa aaataacggc
    11821 ataaatgccg ttatgggaat ttggtaggca cgattggatt cgaaccaacg acccccacca
    11881 tgtcaaggtg gtgctctaac caactgagct acgtgccttc aaagaatttt tgcattttat
    11941 cgggtcgttt taatttttgc aagaggtatg tgcgtttctt tatgcaacat tgcggcaaga
    12001 tttggggatg tcgtctgaaa aaccgtggga aatcatttat aatgccgtct tttaaaacat
    12061 atttcgcccc ctgtcgccca actgacattc aatcttatgc ttaaatttac cttacacaaa
    12121 aaagacggat acgcccgacg cggcacgctg gagttgaacc acggcaaaat cgaaacgccg
    12181 gtatttatgc ctgtcggtac ttacggttcg gttaaggcga tgaacccgca aaacctgcac
    12241 gacatcaagg cgcaaattat tttgggcaac acttatcatt tgtggctgcg tccgggcttg
    12301 gaggtcgtcg aacagtttgg agggcttcac ggctttatcg gctgggacaa accgattttg
    12361 accgactcgg gcggttttca ggttttttct ttgtcggata tgcgcaagct gacggaagaa
    12421 ggctgtacgt ttaaaagccc gattaacggc gacaagctgt ttttatcgcc tgaaatttct
    12481 atgaaaatcc aaacggtttt gaactcggac atcgcgatgc agttggacga atgcacgccg
    12541 ggcgaggcga cgcgcgaaca ggcgcgaaaa tcgttgcaaa tgagcctgcg ctgggcggaa
    12601 cggagcaaaa aagcctttga agatttgaaa aacccgaacg cactgttcgg catcgtgcaa
    12661 ggcgcgatgt atgaagattt gcgcgaagag tcgctgaaag gcttggaaga gctcgatttc
    12721 cccggcttgg ccatcggcgg cttgtccgtt ggcgaaccta agcccgaaat gtaccgcatg
    12781 ttgcgcgccg tcggccctat cctgccggaa cacaaacctc attatttaat gggcgtcggt
    12841 acgcctgaag acttagtgta cggcgtggca cacggcgtgg atatgttcga ctgcgtcatg
    12901 cctactcgca atgcgcgtaa cggctggctg tttacccgtt ttggcgattt gaagatcaaa
    12961 aacgccaaac acaagctcga caagcgtccg atagacgaaa gctgcacctg ctacgcctgc
    13021 caaaacttca gccgcgccta cctgcaccat ctgcaccgcg ccggcgaaat cttgggcgca
    13081 cagctcaaca ccatccacaa cctgcatttc taccaagtca ttatggcgga aatgcgcgat
    13141 gccatagaac aaggcaaatt tgccgactgg caggcgcgat tccacgaaaa ccgtgctcgc
    13201 ggcacagact gactcccggc aatgccgtct gaagccgctt cagacggcat tttgccgctt
    13261 taccctaccc gcactatttt tcagaaaccg atcatgcttc cattccttcc agaaccctcc
    13321 ctttcctata cgcaacaaaa ccgtaccgcc gttttgctgt tgaacctcgg cacgcccgac
    13381 gcgccgaccg cgcaggcggt acgaccttat ctgaagtcct ttctgaccga ccggcgcgtc
    13441 gtcgaactgc ccaaatggct gtggtatccc attctgcatg gtctggtact gacgttgcgc
    13501 cccaaaaaaa gcgcgcacgc ctatgaaaaa atctggttta aggaaggttc gcccctagaa
    13561 gtttacacag cacgccaagc tgccgcgctt gccgaacgta tgcccgacct catcgtccgc
    13621 cacgccatga cctacggcaa tccttcggtg gcagacgtat tgtcggaact gaaggcgcaa
    13681 ggcgcgggca gactgctggt catcccgatg tacccgcaat atgccgcttc cagcagcgga
    13741 gcggcagtag ataaggtgtg cgaacaatta ctgctgcaac ggaaccaaat gagcgtccgc
    13801 accgtttcgc gcttttatga cgataccggc tacattgatg cgatgaaaaa ccacatcctc
    13861 cgatattggg cggaacacgg acgtgggaaa aaactgatgt tgagttttca cggcgtaccg
    13921 cagaagcact acgacctcgg cgacccctat cccgacgagt gccgccacac cgccaaactg
    13981 cttgccgaag cactggaact gaccgaagac caatatgtcg tatcgttcca aagccaattc
    14041 ggcagggcaa aatgggttac accgagcacg caggatttgt tcggcaaact gcccaaacag
    14101 ggggtaaccg agctggacgt attctgcccg ggctttttgg cagactgttt ggaaaccatg
    14161 gaagaaatcg ccctgatggg gcgggaacag ttttacgaag caggcggcaa aagctaccgc
    14221 tacatcccct gcctcaacga caaccccgac tggatagacg cactcgtcgc acttgccgaa
    14281 gaaaaccttg gcggctggcg ttgaaactgt ttgacccatg tctaaaatgc cgtctgaacg
    14341 ccgtgttcag acggcatttt cccgctactt tagcgtatga tggcatctat gccggacaac
    14401 aacatcaagt gcaaccttac taccgattcg gcaaaaaaat ctttcacccg ctacgcaaaa
    14461 tcaacaacaa ggtttcaaac attaaggaaa caccaatgaa cacaacccga ctgccgaccg
    14521 ccctcgtctt gggctgcctc tgcgccgccg cttctgccgc cgacaacagc atcatgacaa
    14581 aagggcaaaa agtgtacgaa tccaactgcg tcgcctgcca cggcaaaaag ggcgaaggcc
    14641 gcggaaccat gtttccgccg ctctaccgct ccgacttcat catgaaaaaa ccgcaggtgc
    14701 tgctgcacag catggtcaaa ggcatcaacg gtacaatcaa agtcaacggc aaaacctaca
    14761 acggattcat gcccgcaacc gccatcagcg atgcggacat tgccgccgtc gccacttata
    14821 tcatgaacgc ctttgacaac ggcggcggaa gcgttaccga aaaagacgta aaacaggcaa
    14881 aaggcaaaaa aaaactaaac agacaaaatg ccgtctgaaa ccggcaatcc ggcttcagac
    14941 ggcattcaaa tcaaaccttt ctaacgcggt actttcagcc ccatagaccc gatattgccg
    15001 ccaccgtcaa cctccttcgc ggtcagcata aagccgccga tgtcaatacg gccgcactcg
    15061 accggctcct gactgtcgga acgcttatcg aaaagctcgg caaggctcaa accctcttcg
    15121 cccgcttcca gcctcaaacc gtaagcaagt gccaaatcac ccgaacgtgc tgccggcgaa
    15181 acgacaaact cgccgaaaaa atcaaaatgc tcacggacac cgatacccgt ctcggtaaag
    15241 tatttcgcca ttttatagtg aactaaattt aaaccagtac ggcgttgcct cgccttagct
    15301 caaagagaac gattctctaa ggtgctgaag caccaagtga atcggttccg tactatttgt
    15361 actgtctgcg gctcgccgcc ttgtcctgat ttaaatttaa ttcactatat cgaccttgcc
    15421 gtcgggcagg atgtaccacg ccaaatcccc gcctgaagca cggtgtcgga ctgcatttct
    15481 attcggctat acgccttttc acgca
//
LOCUS       DBBZXW010000038        15403 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.038, whole genome shotgun sequence.
ACCESSION   DBBZXW010000038 DBBZXW010000000
VERSION     DBBZXW010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.038"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..139)
                     /locus_tag="ACJJD2_001086"
     CDS             complement(<1..139)
                     /locus_tag="ACJJD2_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7579640.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YL"
     gene            complement(290..682)
                     /gene="rpsI"
                     /locus_tag="ACJJD2_001087"
     CDS             complement(290..682)
                     /gene="rpsI"
                     /locus_tag="ACJJD2_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HGG7579641.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(692..1123)
                     /gene="rplM"
                     /locus_tag="ACJJD2_001088"
     CDS             complement(692..1123)
                     /gene="rplM"
                     /locus_tag="ACJJD2_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HGG7579642.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1301..1480)
                     /gene="ssrS"
                     /locus_tag="ACJJD2_001089"
     ncRNA           complement(1301..1480)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACJJD2_001089"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1486..1791)
                     /locus_tag="ACJJD2_001090"
     CDS             complement(1486..1791)
                     /locus_tag="ACJJD2_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HGG7579643.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1802..2131)
                     /locus_tag="ACJJD2_001091"
     CDS             complement(1802..2131)
                     /locus_tag="ACJJD2_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579644.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(2186..3175)
                     /locus_tag="ACJJD2_001092"
     CDS             complement(2186..3175)
                     /locus_tag="ACJJD2_001092"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HGG7579645.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3298..6000)
                     /gene="ppc"
                     /locus_tag="ACJJD2_001093"
     CDS             complement(3298..6000)
                     /gene="ppc"
                     /locus_tag="ACJJD2_001093"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HGG7579646.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPQSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            6043..6936
                     /locus_tag="ACJJD2_001094"
     CDS             6043..6936
                     /locus_tag="ACJJD2_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG7579647.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
     gene            complement(7335..7559)
                     /locus_tag="ACJJD2_001095"
     CDS             complement(7335..7559)
                     /locus_tag="ACJJD2_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HGG7579648.1"
                     /translation="MDAVQELERRIVELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(7560..8948)
                     /locus_tag="ACJJD2_001096"
     CDS             complement(7560..8948)
                     /locus_tag="ACJJD2_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HGG7579649.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLVFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(9034..9855)
                     /gene="prmC"
                     /locus_tag="ACJJD2_001097"
     CDS             complement(9034..9855)
                     /gene="prmC"
                     /locus_tag="ACJJD2_001097"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HGG7579650.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(9845..10306)
                     /locus_tag="ACJJD2_001098"
     CDS             complement(9845..10306)
                     /locus_tag="ACJJD2_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579651.1"
                     /translation="MQEQNRKSSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAALWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVATIGTFAGKNKERKAASAADGIKNDV"
     gene            complement(10371..11855)
                     /gene="tldD"
                     /locus_tag="ACJJD2_001099"
     CDS             complement(10371..11855)
                     /gene="tldD"
                     /locus_tag="ACJJD2_001099"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HGG7579652.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRMNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVHRFVDSAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLMGTQSTGNGRRESYASVPMPRMTNTFMENGGYEPDEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      12033..12136
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            12203..13426
                     /gene="cytX"
                     /locus_tag="ACJJD2_001100"
     CDS             12203..13426
                     /gene="cytX"
                     /locus_tag="ACJJD2_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HGG7579653.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVLV
                     RLFFKKTQSLQRNPS"
     gene            13423..14523
                     /locus_tag="ACJJD2_001101"
     CDS             13423..14523
                     /locus_tag="ACJJD2_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HGG7579654.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVIKLGRQSIPLWRNIRGHLKTPAMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADEIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECVPEGLQAQYDWLIDCRGYGAKTAWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYNRARRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            14544..15161
                     /gene="thiE"
                     /locus_tag="ACJJD2_001102"
     CDS             14544..15161
                     /gene="thiE"
                     /locus_tag="ACJJD2_001102"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HGG7579655.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKALHGDE
                     LKREIARCVAACQGSHTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT         3206 a         4360 c         4296 g         3541 t
ORIGIN      
        1 gaaggtaacg ggttctttga cgattcaggt actgttcgat cggttgccaa tcaatcacct
       61 gatccaactt caatagcggg aaacggtcga tgtgtttggc aatcatggct tgggcggttt
      121 gctggaagaa ggtgctcatg agaaatcccc taaatgtctt ggtgggaatt taggggattt
      181 tggggaattt tgcaaaggtc tcaatctgta atctttagat tgccaatggg aaaccgtcta
      241 ctacaaataa aaaaccctgc gataagcagg gttttttgaa tttccaacat taacgtttgg
      301 agaattgttt tgcacggcgt gctttgcgca gacccggttt tttacgttcg acttcgcggg
      361 catcgcgggt aacaaaacca gcttgagaca aggcgggttt caacgcggca tcgaagtcga
      421 tcagggcacg ggtaatgccg tggcggattg cgccggactg gccggtttcg ccgccgccaa
      481 caacattgac tttgatgtcg aaagattcgg cgttttcagt cagaaccaag ggttggcgaa
      541 caaccattcg gctggtttcg cgtgcgaaga attcgtcaac gggacggccg tttacgatga
      601 tttgacctgt acctttaatc aggaatacac gagccactga acttttgcgg cggcctgtgc
      661 cgtagtagta tttaccgttc atgtcgcgtc cttatttcag ttccaaaact ttgggttgtt
      721 gcgcagcatg ggcgtgttcc gcacccgcat acactttcag ttttttaatc atggcgtaac
      781 ccaaaggacc tttgggcagc atacctttta cagcttgttc caaagcgcgg cccgggaatt
      841 gctcttgcat ttcgcggaaa gtgcgttcgt agataccgcc tggaaaaccg gaatggcgga
      901 agtatttttt atcttcgaat ttggcaccgg ttacacgcag tttgtccgca ttgataacaa
      961 tgatgtaatc gccggtatcg acgtgggggg tgtattcagg tttgtgtttg ccacgcagac
     1021 ggctggcgac ttcggccgca acgcgaccca agactttgtc ttgggcatcg atgacgaacc
     1081 attcgcgctt cacctcgtgg ggtttcgctg aaaaggtttt catagtggaa atccaaatag
     1141 atatagaaag ttgtaaattt taaagacagg attcgatttt gtcaatcgca ttaccgcgtt
     1201 acggaaggat tttccggatt tcggcagact gcatactgct ttttcgggcg gggcggcggc
     1261 caatgtgaaa aaccgcatcg ttgcgatgcg gttttgaatg ggaatccccg cgagagccgt
     1321 ttcggccgaa tccgcttgaa ccttgctgac aaggcggctg cctcgggtag tttcgggtgc
     1381 gtccgcaaaa ggacgctcgc gcccactact gctcccggca accttaagcg aacttattgg
     1441 ttcaaaggaa tatatgcctt cgcggacacc gcagggaaaa aggggttatt cctgcgccaa
     1501 gcgggatagt gctttttggc aggcgttgtc catatcggct attttacgcg caaaatcgcc
     1561 gattgccaaa tcgccgccgt tcagggaggt tttcaacagg tcgtggacga cgttgagcgc
     1621 ggccataatg acgatttttt cgctgtccgc gacgcgtccg ccttcgcgga tggcttcggc
     1681 tttgccgttg agcattccga ctgcctgcaa cagtgtgtct ttttcttctg ccggcgtgtt
     1741 gacggtcagc cgggcgtgca tgacttcgat gtggacttgt tcgatgttca tcctttaatc
     1801 cttattgctg cgtttcctgc cattggggga ggcgcgctgc cagtgcgctg attttttccc
     1861 tgctctgttc gagcaggctg cggtatcgtg tattttcttc tgtcaggctg tcaattttgt
     1921 tttgcaggtc ttctttgagt ttgccgactt ggacgagcag ggcttcgctg agttcgtcga
     1981 cggcggtttc gtgttcgagt ttttgccgct cgtgcgcccg tttgagttcg gcgacggttt
     2041 ctttgaggcg gcggttttcg ctgacgaggg tttcgaattt ttgtaccagc gtataaacgc
     2101 tgctttcgag tttttcgata ttttgtttca taaccttacc tgtccgtatg ccgtctgaag
     2161 gcctcagacg gcatctgtct gttgtttatt cgaaacgcgc gctgcgttcc atcagtcttt
     2221 cgacgacctg ctgaggggtc atttccttac ggatgagttg cagcagggtt tgggtaatcg
     2281 gcatatcgat ttggtactta caggcagtat tgaagacttc ttctatcgtg ctgacccctt
     2341 cggaaacgtg tccgatttcg accagcacct gatgcagttc cttgccttct gccaaaccca
     2401 agccgacgcg gcggttgcgt gagagtgcgc cagtgcaggt caagatgagg tcgccgatgc
     2461 ctgccagccc catcatggtt ttgggctgtg cgcccattgc ggaggcaagg cgggtaattt
     2521 cagctaatcc gcgcgtaacc agtgcggcac gggcgttaag cccgtactct aggccatcgg
     2581 acaatccggt ggcaatcgcc ataacatttt ttaccgcgcc gccaaccgcc acgccgataa
     2641 cgtcggtact gccgtaaagc ctcatgacag tcgtgttgag ctgcggtacg agttcttcaa
     2701 tccactcttg gttttcggag gcgaggacga cggcacaggg cagttgtttg gcgagttcct
     2761 gtgcaaaact cgggccggag agtacgccga ttttcttatt gtcgggcaat acttctttca
     2821 atacttgaaa ggtcagcagc cctgtatcct gctcgaatcc tttgcaggcg gcgaggacgg
     2881 ggaggtgtcc cgcgccgtac tgtttgagca gctctgcgct gcttctcaat ccggcaacgg
     2941 aggttacgat aaggacaagt ccgctgtctt tgagcgcgtc tgccaaatcc gcacacactt
     3001 ccaaggtttc gggaaaggaa aagccgggca gtccgcgttt gttttcacgc gcttcctgca
     3061 tttggcggac ttggtctgcg ttgcgcgtcc acagggatac gcggttgccg tgttgggaaa
     3121 agtgcagggc gagcgccgta ccccacgaac ctgcgccgat aacggtaatt ttcattggtc
     3181 gtctttcaac atatcactgc cgttcacttt aaaacaatcg gtgtttctct gcaagtgcgg
     3241 tcagggaaat gccgtctgaa aggtgttcag acggcatttt gccccgatgc ggcacaatca
     3301 gcctgtattg cgcaaacctt gcgccacgcc gttgatggtc aggtgaacca tcagcagcgc
     3361 gtgcggattg tcgggttctt tacgcaggcg tttgagcatg gcgacctgca ggccgttgag
     3421 cgcgttcagg tagggaatcc tcaaggcaag cgaacgggcg aggctgcggt tgtcgcgtaa
     3481 aagttcttcg gtttgcagca ggtcgagcag ggctttgcgg ctgcgttggt attcttcctt
     3541 aatcatgccg aagatgacgg cggctttttc cggcgattcg ctcaagccgg catagttttc
     3601 cgcgagggtg atgtcggttt tcgccatcac ttgctccata ttggaaagca tggcttggaa
     3661 gaacgggttg ctttgggcgt gttcgcgcag ggcggcgagc gtttcgggtt tgtcttcgca
     3721 caaggtttcc accgcgctgc cgaaaccgta ccaagcaggc agcatgaggc ggttttgcat
     3781 ccaggaaaat acccacggaa tcgcgcgcaa gtcttgaatc cgcgctaagg tcttgcggct
     3841 ggcaggacgg ctgccgaggt tgagggtggc gatttcctga atcgggctgg tttgcaggaa
     3901 gtagtcgatg aagtcggggt gggtaatcag ttcgcggtag tatttgaacg atacgtccga
     3961 caatgcctgc atcagtttgg catcagggtc ttttttatcc ggcaggatgc tggcttccaa
     4021 agtcgcggca accaaggttt ccaagttgcg ttgggcattg ccggggtcgg cgtatttggc
     4081 ggtaatgact tcgccttgtt cggtaatgcg gatttgtccc gccacgctgc cggccggttg
     4141 cgccaaaatg gcttggtaag aagggccgcc gccgcgtccg acgctgccgc cgcgtccgtg
     4201 gaacaggcgc atgcggacat cgtatttttt gaagagttcg accaagccca attccgcctg
     4261 atagaggcac catgagctgg taacgtagcc gccgtccttg ttggagtcgg agtagcccag
     4321 catgatttct tggatattgc cgcggctttc gagcagggca tcgtaccagt cgaggcggaa
     4381 catggtttcc atgaccggac aggcgttttc caacgcttcg atggtttcaa acagcggcac
     4441 gatattgatg cggctttgcg gtttgccgtt ttctaccgcc aacaggccgc tttctttcag
     4501 cagcaatgcc aaggcgagca ggtcgctggg ttgttcgcag ttggaaataa tgctttgcgt
     4561 aacggcatct tcgccgaatt cgtctttgat tttgcgcgct tcattgaaaa tcgccagttc
     4621 gtggcgagta tggtcgctgt atgtgatgaa cggactgtac agtggacgtt gatggctcaa
     4681 ttcgcgcaac agggcggctt gtttttgctc ttcattcagg ctgttgtagt cttccaagcc
     4741 tgcgtgttgg aaaagctcgg caaccacatc ggcgtgtttg cctgcgtgtt ggcgcaggtc
     4801 gagcggcatc atgtggaagc cgaacacgga cacggaacgg atgaggtctg ccagacggcc
     4861 ttcggcaagc aggcggctgc cgttgtcgat aagggaacgt tgcaattttt tcaaatcatc
     4921 gagaaattct tgtgccgaag cataaggctc gagaaagccg aatttgcagc ccatgcccaa
     4981 accgagcgcg cgcgctttgc ccatagcgcg cgccatgatg taagcaatgg cgcggcggta
     5041 gggttcttcc gtgcgggcaa gttcttcgtc aggcgagagg gctgccagtg ccattacgtc
     5101 gtcgttgact ttgacgcggc ggatggagag cggcagttcg cggtaaagtt tgtcgagttc
     5161 gccacggtaa aaacggaaca cggcatcggc gtggcggcgg aaggcaaaac gcaaggtttc
     5221 ggcagaaacg aacggattgc cgtcgcggtc gccaccgatc cagccgccga ttttgaggat
     5281 gttcggaacg cagacatcgg gatagaccat ctgaaagtcg tgttccatat tgcggtagag
     5341 cttgggcagg gcttcgaaaa agctcatcgg gaagatggac acgccgttgt tgatttcgtc
     5401 gttgacgctg agtttgtggc ggcgcgtttc gctggtctgc cacaagccca gcaggatagt
     5461 gtcgatttcg cggcgcagcc gtgccagcgc gtcggcattg gtgcagcgtt cgcgttgcgg
     5521 caacagtgcg cggatgcggc ggttgaagct taagacggtt tggcgttgca cttcggtcgg
     5581 gtgcgcggtc aaaacggcgg taacggacgt attgtccaac tgccgctgca ccgatttgcc
     5641 gtcggctttc cccgctttga gcctgcggac ggtttccgtc aggctgcctt ccgcgccgcc
     5701 gcgtccggct tcttcgtgga tttggcggcg gcgttcgtgg tgcacgtctt cggcgatatt
     5761 caaaatctgg gcgaacaggc cgcaggccaa ggttaaatcg tgggtttgtt gttcgtccaa
     5821 ttgcggcaat actttttcaa tcaatgccgc gctgtcgtcg gaagtggaca agagtttgac
     5881 cgtttcgaca accaatggcg aggcttcttc gtgcaggagg ttgaacaggg attgtttcag
     5941 aaattccgcg tccgccgcca aagccgcgtc ctttggattg ttcagaatat gcagttgcat
     6001 gatttttctc tcattgccgt aaatactgta aatgtacctc aaatgccgca tccgtgccaa
     6061 accgttcaca ctttaaccgc ccgtgtcccg aaatgccgtc tgaagttgaa cgccgcccga
     6121 cggcagcgtt acaatcgccc acaactgttt tttccgaaca tcatcatgac cacgaccgaa
     6181 cacgacaacg acgatgcatt cctgctgcgg tacagccgcc acatcctctt ggacgaaatc
     6241 ggcatcgaag ggcagcagaa actttccgcc gcgcatattt tggtcgtcgg ctgcggcggt
     6301 ttgggtgccg ccgccctgcc ctatctcgcc gcttccggca tcggcacgct gaccatagcc
     6361 gattccgaca cggtcgagct gcacaacctg caacgccaag tcgcatttga cgagggcgat
     6421 gtcggcaagc ccaaagccga agccttggca gaccgcctga aacgcatcaa ccataacgtc
     6481 gatgtccgca ccgtcaacga aaaactcgac ggctgccgcc tgaccggttt ggttcaaacc
     6541 gccgacatcg ttttagactg ctgcgacaac tacgccacgc gccaagccgt caaccgtgtc
     6601 tgcgtacaaa cgaaaacacc gctggtttca ggagcagcgg tgcgctttga agggcaactt
     6661 gccgtgtacc gtcccgactt gcccgactcg ccgtgttacg cctgcctgtt tgacggcgga
     6721 tcggcttcag acggcatctg ttccctcttc ggcgtgttct cgccgctggt cggcatcatc
     6781 ggcagtaccc aagcggcgga ggctctgaaa atcctgctgg atgcgggcga accgtcgcac
     6841 ggcaggctgg cggtttaccg tgccttggaa gggggctggc aatatttcga cctgccgcgc
     6901 aaccccgaat gcccgatttg cggcgcggaa cggtaaaacc ctgccgccgt ttcagacggt
     6961 atccaaacgg atgcggcgga acggttttaa aaatttaaaa atttacattt ctttgcaaaa
     7021 aaaataaact taccttataa ttgcagttgt tttagcaatg tctgtttcgc agactcattg
     7081 agtaagacgt tttccccgta atgtgtttgg ccgtctgtcc cctttgggtt cggacggctt
     7141 ttttttggct gtgtatgaat acccggttgg ttttatctgt ttacagggga aaaccgctta
     7201 tttccgttcg ggcggaaaac ggttccatcg gataaaaggc attttgtccg actgattaaa
     7261 gttacatctt aggtttgcat cggcaaaata ttcaaacaca gcctttttta aggaaatccg
     7321 gatacggcgg cgcatcaata atgcggcgga atctcgtcgc gcagggaata cggctcttgc
     7381 gcgtcgggat tcctgtcctg cattttttga tacagcagcc tcaactgagc ctgctgcaaa
     7441 tccagcgtct gccgcaattc cgccaccatc gcgttcaggc cggcgattac gtcctcctga
     7501 agcgcggatt ggatttccag ttcgacaata cggcgttcca actcttgaac cgcgtccatt
     7561 tacagcacca tcgcggcaat ccagccggca atcagcagcg ggatgttgta gtggatgaag
     7621 gtcgggataa cggaatcgcg gatgtggtcg tgctgcccgt cggcgttcag ccccatcgtc
     7681 gggcccagcg tggaatcgga cgcaggcgaa ccggcatcgc ccaacgcccc cgccgtgccg
     7741 acaatggcga cggtggcaag cggcgaaaaa cccaaaccga cacacaaagg cacataaatc
     7801 gcggcaataa tcggcaaagt ggaaaaggac gaaccgatgc ccatcgttac caaaagcccc
     7861 accaccagca tcgccaacgc cgccatacct ttgctgttgc cgaatatcgc catactgctt
     7921 tccaccagcg gctgaatatg cccggtcgca ttcatcacgg cggcaaaacc ctgcgcggca
     7981 atcataatga agccgaccat cgccatcatc ttgatgcctt cgccgaatac gtcgtttgcc
     8041 ttgtcgcggt tgatgacgcc caacatcata aatacggcga aaccgagcat cgcgcccaac
     8101 accagcgagt cttcatacat caactggatg gcaaagcata cggcaatggc ggcggcggcg
     8161 gccaggctgc ggtaggcgga cggctgcgga cggtttgccg catcggcgtt gcccgccgta
     8221 tcggcattgt tgctttggta caggcgcggt ttgcggtaat ggacaaacac cagcaggagt
     8281 ccggccagca ttcccaacgc gggaatcgcc attgccgcca ttacgttgat gtttttcaca
     8341 tcaagctgcg gcgcggcgga atggatgttg cccaacagga tttcattcaa aaaaatcgcg
     8401 ccgaagccgt aaggcaggaa catataagtc gtaaccagcc cgaaagtgat gacgcacgca
     8461 atcaggcggc ggtcgatttt caggcggttg aacaccaaaa gcagcggcgg aacaatcatc
     8521 gggataaagg cgatgtggat ggggatgatg ttctgactca taatgcccat cacaaggatg
     8581 atggaaagca gcagccattt gaccgcgccc tcgcccgaac gcacgctgtc gggcataccg
     8641 ccccggttca gcttgcggac gaccgcgccg gcaagctgtt gcggcaggcc ggaatgggta
     8701 atcgccattg caaacgcgcc gagcatcgca taagaaagcg caatcttcgc accgccttcc
     8761 aaacctttgt tgaacacggg gataatcccc gcctgactga cctgtcccgc cgcatcggca
     8821 atgttttgca gcggcatacc cgccaccgcg ccgccgacaa acgcgccgac cgtcaggctc
     8881 aataccacgt gcacgcgcga cagcgacagc accagcataa cgattacggc aactacgact
     8941 gcattcattg tttatcgctc caaacctata aatgtttaca tatcgaaaca catcataacc
     9001 caataatgga aaacccgcca attttgcaaa caattatttc aaatgcttca tatacttccc
     9061 cagcgtaacc ctgtccaaac ccgccaagtc cggcagggtt tccactcctg aaaaaccatt
     9121 ctccgccaac acgccgcgca ccgccgcgcc ctgatcgaaa ccgtgttcca acaacaaaaa
     9181 accgccttcc gccaaacggt cgggcgcgcc ttgcgccaag gtgcggatgc agcttaggcc
     9241 gtctgaaaag tcggtcagcg cgatttgcgg ctcaaaccgc aaatcgcctt gcaacaaatg
     9301 tttatcgccg ttttcgatat agggcgggtt ggacacgatg atgtcccatt tcccttcaga
     9361 cggcatatcg gtgtcgaacc acgaaccgtg tgcaaattcg acccgcgcgc ccaaatctgc
     9421 cgcatttttc cgcgccgttt caagggcggg cgtgctgatg tcggatgcgc gcacaaacgc
     9481 atcggggcgt tcgagtgcga cggttacggc aaccgcgccg ctgcccgtcc ccaaatccca
     9541 cacgcgcccg ttttcgggca ggcgcgccaa tacggcttcg accaagtgtt cggtttcggg
     9601 gcgcggaatc agcacgctcg gattgactgt aaagcgtctg ccataaaatt cgcgcacacc
     9661 taaaatatag gcaaccggct cgccgttcag acggcgttgc gccagcctgt ccgcccgctg
     9721 tcggacttcg tccggcattt cttccccgcc ccgcgtcaac aactgcacgc gcgtatattc
     9781 cgaaacatat tgcagcagca ttcttgcttc aattttaggc agttttgaca agcccaacca
     9841 ttcgtcaaac gtcatttttt atcccgtctg ccgccgatgc ggcttttctt tccttattct
     9901 ttccggcaaa cgtaccgatg gtggcaaccg caaatgcggc ataccacaaa taaaatcctg
     9961 caccgtagcg cacaatatcc gatgtattcc ctgcttcatc gacgtatacg gctttcacac
    10021 tgaaagccac caacgccaag ccccaaagtg ccgcatggac aggcacgacc ttcttccgca
    10081 acgccagcaa aacaatggcc gccaaccaaa cataattcgc atagaccgca caatacctga
    10141 tatccaaaga agcaaatatc gaccccaaaa tcaaaacggt caaaccctcc atgcttccat
    10201 gattgcccaa ataaaatgca acattggata aagacgctat ccacagggca accgacacca
    10261 gcaacatcac tatgggaaaa cttgatttcc gattctgttc ctgcatggtt ttatcctaat
    10321 gtaaaaggcc gcctgaaaac ctttcagacg gcatcgtgcc ggattccgcg tcagattgcg
    10381 ctgccgccga cggtcagtcc ggcatcaatc cgcaaagtcg gttgccccac gccgacgggg
    10441 acgctctgcc cttctttgcc gcacacgccg acaccgctgt cgagcgcagt atcgttgcct
    10501 atcatggaaa cgtgtttcag cacttcgggg ccgttgccga taatggtcgc gcctttgacg
    10561 gggtattgca gcctgccgcc ctccacccac cacgcttcgg acgcgctgaa cacgaatttg
    10621 ccgctggtaa tgtccacctg tccgccgccg aagttgacgg cgtaaatgcc tttgtcgatg
    10681 gacgcgatga tttcgtcggg ttcgtagccg ccgttttcca taaaggtatt ggtcatgcgc
    10741 ggcataggga cggaggcgta gctttcgcgg cggccgttgc cggtcgattg cgtgcccatc
    10801 aggcgggcat tggtttcgtc ctgcatataa ccgaccaaga tgccgtcttc aatcaatacg
    10861 gtgcggcggg tttcgttgcc ttcgtcgtcg atgttgagcg aaccgcgccg gccggcaata
    10921 tcgccttgat ccacaacggt aacgcctttg gcggcgacgc gctcgccgat tcggccggaa
    10981 aagacgctgg ttcccttgcg gttgaaatcg ccttccaaac cgtgtccgac cgcttcgtgc
    11041 agcaacacgc ccggccagcc gttgcccaaa acgacggtca tttcgccggc aggcgcagga
    11101 cgggattcaa gattggtcag ggcttgtttg acggcggaat cgacaaaccg atgcaccaag
    11161 ttttcatcga aataagccaa gtcgtagcgt ccgccgccgc ccgcgctgcc ctgttcgcgg
    11221 cgttcgccct gtttggcgat aacggtaacg ttcatgcgca ccatcgggcg gatatcggca
    11281 gcgtgtttac cgtccagacg ggcgaggtaa accatgtcgt attcgcaggt caaaccggcc
    11341 atcacttgca cgatgcgcgg atcggcggct ttggcgattg cttccacttt gttcaacagc
    11401 gcgactttgg cggcggaatc gaggccggca atggggtcgg acgcggaaca aaccggcttg
    11461 ccgcgcgttt cagacggcat tttggcggac accttgccgc ctgccgcccc aatcgcgcgg
    11521 acggcgcggg cggaacggtt tatcgaatcg atgcacaggc tgtcggcgta ggcaaaggcg
    11581 gttttatcgc ccgaaacggc gcgcacgccc acgccctgat tgatttggaa gctgcccgat
    11641 ttgacgatgc cctcttccaa atgccagctt tcataagcgg tgcgctggca gtagatgtcg
    11701 gcgtaatcga cgtggtgcgc gccgatgatg cacaggcttt tggcgagcag ttcgggggaa
    11761 aggcggttgg cttcgagcag ccgcgcctgt acggcggaat aggtcggatg catagtgtcg
    11821 gcgcataaaa aatcaggggc ttgattatac ggcatttgtt atatagtgga ttaacaaaaa
    11881 acagtacggt gttgcctcgc cttgccgtac tatttgtact gtctgcggct tcgtcgcctt
    11941 gtcctgattt ttgttaatcc actatagaaa tgcgccgtgc cgcctgaaat gtaagatttt
    12001 tgccaacgcc ccctgctttt gtgtacactt aaagctcctt gtcggagtgc cgccgccggg
    12061 cggctgagat tgcgaaagca gaatccgtag aacctgtcgg ggtaatgcct gcgtaggaaa
    12121 caaaccgtca aatgccttat caggcttccg ttcccttttc cgcacttccc cgcccacctt
    12181 ccttcttttt aaaggacgtc atatgtcggg caatgcctcc tctccttcat cttccgccgc
    12241 catcgggctg atttggttcg gcgcggcggt ctcgattgcc gaaatcagca cgggtacgct
    12301 gcttgcgcct ttgggctggc aacgcggtct ggcggctcta cttttgggtc atgccgtcgg
    12361 cggcgcgctg ttttttgcgg cggcgtatat cggcgcactg accggacgca gctcgatgga
    12421 aagcgtgcgc ctgtcgttcg gcaaacgcgg ttcagtgctg ttttccgtgg cgaatatgct
    12481 gcaactggcc ggctggacgg cggtgatgat ttacgccggc gcaacggtca gctccgcttt
    12541 gggcaaagtg ttgtgggacg gcgaatcttt tgtctggtgg gcattggcaa acggcgcgct
    12601 gattgtgctg tggctggttt tcggcgcacg caaaacaggc gggctgaaaa ccgtttcgat
    12661 gctgctgatg ctgttggcgg ttctgtggct gagtgccgaa gtcttttcca cggcaggcag
    12721 caccgccgca caggtttcag acggcatgag cttcggaacg gcagtcgaat tgtccgccgt
    12781 catgccgctt tcctggctgc cgcttgccgc cgactacacg cgccacgcgc gccgcccgtt
    12841 tgcggcaacc ctgacggcaa cgctcgccta cacgctgacc ggctgctgga tgtatgcctt
    12901 gggtttggca gcggcgttgt tcaccggaga aaccgacgtg gcaaaaatcc tgctgggcgc
    12961 aggtttgggt gcggcaggca ttttggcggt cgtcctctcc accgttacca caacgtttct
    13021 cgatgcgtac tccgccggcg cgagtgcaaa caatatttcc gcgcgttttg cggaaacacc
    13081 cgtcgctgtc ggcgttaccc tgatcggcac ggtgcttgcc gtcatgctgc ccgttaccga
    13141 atatgaaaac ttcctgctgc ttatcggctc ggtatttgcg ccgatggcgg cggttttgat
    13201 tgccgacttt ttcgtcttga aacggcgtga ggagattgaa ggctttgact ttgccggact
    13261 ggttctgtgg ctggcgggct tcatcctcta ccgcttcctg ctctcgtccg gctgggaaag
    13321 cagcatcggt ctgaccgccc ccgtaatgtc tgccgttgcc attgccaccg tactggtgcg
    13381 ccttttcttt aaaaaaaccc aatctttaca aaggaacccg tcatgacccg tatcgccatc
    13441 ctcggcggcg gcctctcggg aaggctgacc gcactgcagc ttgcagaaca aggttatcag
    13501 attgcacttt tcgataaagg ctgccgccgg ggcgaacacg ccgccgccta tgttgccgcc
    13561 gccatgctcg cgcctgcggc ggaagcggtc gaagccacgc ctgaagtcat caaactgggc
    13621 aggcagagca tcccgctttg gcgcaacatc agaggccatc tgaaaacgcc tgccatgatg
    13681 caggaaaacg gcagcctgat tgtgtggcac gggcaggaca agccattatc cagcgagttc
    13741 gtccgccatc tcaaacgcgg cggcgtggcg gatgacgaaa tcgtccgttg gcgcgcagat
    13801 gaaatcgccg aacgcgaacc gcaactcggc ggacgttttt cagacggcat ctacctgccg
    13861 accgaaggcc agctcgacgg gcggcaaata ttgtctgcac ttgccgacgc tttggacgaa
    13921 ctgaacgtcc cctgccattg ggaacacgaa tgcgtccccg aaggcctgca agcccaatac
    13981 gactggctga tcgactgccg cggctacggc gcaaaaaccg cgtggaacca atcccccgag
    14041 cacaccagca ccctgcgcgg catacgcggc gaagtggcgc gggtttacac acccgaaatc
    14101 acgctcaacc gccccgtgcg tctgctccat ccgcgttatc cgctctacat cgccccgaaa
    14161 gaaaaccacg tcttcgtcat cggcgcgacc caaatcgaaa gcgaaagcca agcccccgcc
    14221 agcgtgcgtt cagggttgga actcttgtcc gcactctatg ccgtccaccc cgccttcggc
    14281 gaagccgaca tcctcgaaat cgccaccggc ctgcgcccca cgctcaacca ccacaacccc
    14341 gaaatccgtt acaaccgcgc ccgacgcctg attgaaatca acggcctttt ccgccacggt
    14401 ttcatgatct cccccgccgt aaccgccgcc gccgtcagat tggcagtggc actgtttgac
    14461 ggaaaagacg cgcccgaacg tgatgaagaa agcggtttgg cgtatatccg aagacaagat
    14521 taaagccgtc tgaaaggaac cccatgacct tcccgccact caaatccccg ctcaaattct
    14581 acgccgtcgt ccccaccgcc gattgggtgg ggcgcatggt caaagcaggt gccgacacgg
    14641 tgcaactgcg ctgcaaggcc ctgcacggcg atgaattgaa acgcgaaatc gcccgctgtg
    14701 tcgccgcctg tcagggcagc catacgcagc ttttcatcaa cgaccactgg cgcgaggcaa
    14761 tcgaagcagg cgcatacggc gtgcatctcg ggcaggaaga tatggacacc gccgacctcg
    14821 ccgccattgc cgccgccggt ttgcgcttgg gtttgagtac gcactccgtc gccgaactcg
    14881 accgcgccct gtccgtacac cccagctatg tcgccagcgg cgcgattttc ccgaccacga
    14941 ccaagcaaat gcccaccgcc ccgcaaggct tggacaaact gtgcgagtat gtgaaacagg
    15001 caggcggcac gcccgtcgtc gccatcggcg gtatcgactt gaacaacgcc cgagccgtac
    15061 tcgccaccgg cgtttcctca ctcgccgccg tccgcgccgt aaccgaagcg gcaaatcccg
    15121 aagcggtggt taaagcgttt caggctttgt gggatggata aaaccgaaag aagaaaattc
    15181 aattgccgtg tcggcaaaac ttagcccgtt atcgcaaaca tacttaactt taaatgtggc
    15241 atatcatcaa attccgtcat tcccgcgtaa gcgggaatcc gccttaaaac ttgagaaacc
    15301 atcatttgaa aaacagtttc cgaatttcaa aaatggattc ccgcccgtgc gggaatgacg
    15361 gcaaccggtc agttgcgtat caaaaaataa agtaattcgg cta
//
LOCUS       DBBZXW010000039        15286 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.039, whole genome shotgun sequence.
ACCESSION   DBBZXW010000039 DBBZXW010000000
VERSION     DBBZXW010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.039"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(122..1447)
                     /locus_tag="ACJJD2_001103"
     CDS             complement(122..1447)
                     /locus_tag="ACJJD2_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HGG7579656.1"
                     /translation="MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELAGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1658..2497
                     /gene="efeU"
                     /locus_tag="ACJJD2_001104"
     CDS             1658..2497
                     /gene="efeU"
                     /locus_tag="ACJJD2_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
                     /protein_id="HGG7579657.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIAVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            2494..3660
                     /gene="efeO"
                     /locus_tag="ACJJD2_001105"
     CDS             2494..3660
                     /gene="efeO"
                     /locus_tag="ACJJD2_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HGG7579658.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIETKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3929..5194
                     /gene="efeB"
                     /locus_tag="ACJJD2_001106"
     CDS             3929..5194
                     /gene="efeB"
                     /locus_tag="ACJJD2_001106"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HGG7579659.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGDITPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5263..5595)
                     /locus_tag="ACJJD2_001107"
     CDS             complement(5263..5595)
                     /locus_tag="ACJJD2_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HGG7579660.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNKTESAAAEAAEEV
                     RDANGAVLQNGDTIILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIACKIDGSAMNL
                     KSEFVKKA"
     gene            complement(5670..7040)
                     /gene="glmU"
                     /locus_tag="ACJJD2_001108"
     CDS             complement(5670..7040)
                     /gene="glmU"
                     /locus_tag="ACJJD2_001108"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HGG7579661.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIGTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     ARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(7095..7367)
                     /locus_tag="ACJJD2_001109"
     CDS             complement(7095..7367)
                     /locus_tag="ACJJD2_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HGG7579662.1"
                     /translation="MRKTFLILMTTAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(7393..8073)
                     /locus_tag="ACJJD2_001110"
     CDS             complement(7393..8073)
                     /locus_tag="ACJJD2_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HGG7579663.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQEYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTKLHGMADTEHTLCR
                     LNGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVWFGAKSHALSFIDACARDMAQLARYAETLSEH
                     RQTHYNTL"
     gene            8132..9133
                     /locus_tag="ACJJD2_001111"
     CDS             8132..9133
                     /locus_tag="ACJJD2_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7579664.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9227..10075
                     /locus_tag="ACJJD2_001112"
     CDS             9227..10075
                     /locus_tag="ACJJD2_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HGG7579665.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10101..10586
                     /locus_tag="ACJJD2_001113"
     CDS             10101..10586
                     /locus_tag="ACJJD2_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HGG7579666.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGLLAAVFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10688..12256)
                     /gene="msrAB"
                     /locus_tag="ACJJD2_001114"
     CDS             complement(10688..12256)
                     /gene="msrAB"
                     /locus_tag="ACJJD2_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HGG7579667.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12402..13667
                     /gene="ftsY"
                     /locus_tag="ACJJD2_001115"
     CDS             12402..13667
                     /gene="ftsY"
                     /locus_tag="ACJJD2_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HGG7579668.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            13912..14037
                     /locus_tag="ACJJD2_001116"
     CDS             13912..14037
                     /locus_tag="ACJJD2_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579669.1"
                     /translation="MNKTWKRQVFRHTALYTAILMFSHTGGGGRRRKRKRINTLL"
     gene            14010..15286
                     /gene="pilC"
                     /locus_tag="ACJJD2_001117"
                     /pseudo
     CDS             14010..15286
                     /gene="pilC"
                     /locus_tag="ACJJD2_001117"
                     /inference="COORDINATES: protein motif:HMM:NF040838.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
BASE COUNT         3389 a         3902 c         4504 g         3491 t
ORIGIN      
        1 aatttgatcc actataattc cgtcaaataa gaaaggaatt ttgtgcctgc ggtatcgcaa
       61 aacttcgcct taatgcgccc gattgcctag ggatgggctt cagatggcat tgttttccgg
      121 tttacgggcg gtattcgggc ttcataccgt tgggtaggag ctgccagaca tatcccgtgg
      181 ttttctgttt gccggcaagt tcgccggctt cgtcgccgta tccccaaaaa taatccacgc
      241 gcaccgcgcc tttaatcgcg ctgccggtat cctgcgccat aatcaggcgg ttgagggctt
      301 tgcgggtaac cggatgggcg gtggcgacaa ataagggcgc acccaaggta atgtagtgcc
      361 ggtcgactgc gccggcatat tcccccatca gcggcgtgcc cagtgcgccg acagggccgt
      421 cattgctgct tccggcaagc tcgcggaaaa agatatagct ggggttttga cccaaaactt
      481 cggcgaggcg ttgcggattt tgccgcatat aagacttaat gccctgcatg gaggtttgtc
      541 cgagtttgag gtagccctta tccgccatat agcgtccgat ggaaacgtag ggatgttcgt
      601 ttttgtcggc atagccgatg cggatgtatt tgccggacgg ggttttcaga cggcccgagc
      661 cttggatgtg cataaaaaaa agttcgacag ggtcttcggc gtaaccgagt atcggggctt
      721 tgccgtcaag cgcgccgccg ttgatttggt tgcgcgtgtg gtaggggagg aagcggcttc
      781 cttcaaacct gcctttgatt gctgttgtgc gcgcggtgat ggggaatcgg gagaggtcgg
      841 cggtatgtgt gccgccggta ttgtcgattg tgccgctgtt ttttcccgtc tgcctgatgc
      901 ggacaagggc ttttccgctc cgcaaaccgg caggcagggg gacggagata aaatcgtcgg
      961 gaataccgta aatcgggaag cgggcttgtg ccgtccgcct gtcgtcgccc ttcagcaccg
     1021 gttcgtaata gccggtaacc gtaccggcaa ggcttccgtt gcctgcaacc tgccacggcg
     1081 tgaaatagcg ttcaaaaaac tgttttgcct gaaaggaatg gacgggggtt tgaaaggctt
     1141 gggcgcacac atcctgccag ccttggcggt ttttcaaatt ggcgcagccg aggcggaagg
     1201 attgcaggct tttggcgaaa tcctgcgccg cccagtgggg cagggacagg tgcggtacaa
     1261 cggtatagac ggccccgccg ccgccgaccg tcgttccggc ggggtcgggg atgccgaccg
     1321 gccggtccgg gccgttgatg acggatgtgt cgggttgcgg aaaggtttgg atgctcttgc
     1381 tttggcaggc ggcgaggatg gcggcggcga tgccgtacag ggcggcgcgg aataggtatt
     1441 ttttcataat ggacaatgtt gccggcagta ataagaaaga tggtttcggg cggcgttgcg
     1501 gcagccgtgg agaggggatt ttaacacagg gcgcagctgc agcctgcgga actttccgcc
     1561 gcgcggtact gcagataaaa ataacttgca tttgtattta caagcaatga aaatattccg
     1621 ataatatatt attcatcatc cttgttcgtt cgcgtttatg ctggtcgctt ttttaattat
     1681 gttgcgcgag ggtattgaag ccgcgctcat tgtcggcatc gttgccggtt ttctgaaaca
     1741 gtccggacat tccaaactga tgcctaaggt ctggttcggg gtcgtccttg cttctttgat
     1801 gtgtttgggg ctggggtacg gcatccattc ggcaacgggc gagattcccc agaagcagca
     1861 ggagttcgtc gtcggcatta tcggtttggt tgccgttgcc atgctgactt atatgatttt
     1921 atggatgaaa aaggcggcgc gttcgatgaa gcggcagctt caggattctg tgcaggcggc
     1981 tttgaaccgt ggcagcggtc aaggatgggc cttggtcggt atggcgtttc ttgccgtggc
     2041 gcgcgaaggt ctggagagtg tttttttcct gcttgccgta ttcaaacaga gcccgacgtg
     2101 gcagatgccg gccggcgcgg tagcgggggt tttggctgcc gccgtgattg gcgcgttgat
     2161 ttatcagggc gggatgcgcc tgaatctggc gaagtttttt cgttggacgg gggcgttttt
     2221 gattgccgtt gccgccggcc tgcttgccgg ctcgctgcgc gcgctgcatg aggcaggtat
     2281 ttggaacgcg cttcaggata ttgtgttcga ctcatcaaaa tatttgcacg aagacagccc
     2341 gttgggcgtg ctgctcggcg gatttttcgg ctataccgac catccgacgc agggcgaggc
     2401 cttggtttgg ctgctgtacc ttattcccgt cataacttgg tttttgtgcg gcagcaggcc
     2461 gtctgaaact ttaacccgta aagaggagct gaaatgagaa aattcaattt gaccgcattg
     2521 tccgtgatgc ttgccttagg tttgaccgcg tgccagccgc cggaggcgga gaaagctgcg
     2581 ccggccgcgt ccggtgagac ccaatccgcc aacgagggcg gttcggtcag tatcgccgtc
     2641 aacgacaatg cctgcgaacc gatggaactg accgtgccga gcggacaggt tgtgttcaat
     2701 attaaaaaca acagcggccg caagctcgaa tgggaaatcc tgaaaggcgt gatggtggtg
     2761 gacgagcgcg aaaacatcgc ccccggactt tccgataaaa tgaccgtcac cctgttgccg
     2821 ggcgaatacg aaatgacttg cggtcttttg accaatccgc gcggcaagct ggtggtaacc
     2881 gacagcggct ttaaagacac cgccaacgaa gcggatttgg aaaaactgtc ccaaccgctc
     2941 gccgactata aagcctacgt tcaaggcgag gttaaagagc tggtggcgaa aaccaaaact
     3001 tttaccgaag ccgtcaaagc aggcgacatt gaaaaggcga aatccctgtt tgccgacacc
     3061 cgcgtccatt acgaacgcat cgaaccgatt gccgagcttt tcagcgaact cgaccccgtc
     3121 atcgatgcgc gtgaagacga cttcaaagac ggcgcgaaag atgccggatt taccggcttt
     3181 caccgtatcg aatacgccct ttgggtggaa aaagacgtgt ccggcgtgaa ggaaattgca
     3241 gcgaaactga tgaccgatgt cgaagccctg caaaaagaaa tcgacgcatt ggcgtttcct
     3301 ccgggcaagg tggtcggcgg cgcgtccgaa ctgattgaag aagtggcggg cagtaaaatc
     3361 agcggcgaag aagaccggta cagccacacc gatttgagcg acttccaagc caatgtggac
     3421 ggatctaaaa aaatcgtcga tttgttccgt ccgttgatcg agaccaaaaa caaagccttg
     3481 ttggaaaaaa ccgataccaa cttcaaacag gtcaacgaaa ttctggcgaa ataccggact
     3541 aaagacggtt ttgaaaccta cgacaagctg ggcgaagccg accgcaaagc gttacaggcc
     3601 tctattaacg cgcttgccga agaccttgcc caacttcgcg gcatactcgg cttgaaataa
     3661 gccgcaagcg ttcagacggt atttggcggc agataccgtc tgaagtttta tagtggatta
     3721 acaaaaacca gtacggcatt gcctcgcctt gccttgcctt gccgtactat ttatactgtc
     3781 tgcggcttcg tcgccttgtc ctgatttttg ttaatccact atatccgcca tatattgcag
     3841 ggcgggattt caacctgccg ctatcggtta atggaaaaac ggcgtgcagg gatacccatc
     3901 ctgctgcacg gatattgaag gaaacaccat gagcaaaaac caacccgcac aaccgaccag
     3961 gcgcactctt tttaaaaccg cgatcgcagc cggagcagtc ggcgcaatcg gaggttatct
     4021 cggcggcaaa aaacagggcg aaaccgccga acgcaccgcc gaaagccaac actcgcccca
     4081 agcctatccc tgctacggcg aacatcaggc aggcatcgtt acgccgcagc aggcgttttc
     4141 gattatgtgc gccttcgacg taaccgcgca aagtgccaag cagctggaaa acctgttccg
     4201 cacgctgacc gcccgcatcg agtttctcac ccaaggcggc gaataccaag acggcgacga
     4261 caaacttccg ccagccggca gcggcatttt gggcaaagcc ttcaaccccg acgggttgac
     4321 cgttaccgta ggggtgggca gcagcctgtt tgacggtcgg ttcggactca aagacaaaaa
     4381 accgattcat ttgcaggaaa tgcgcgactt ctccaacgat aagctgcaaa aaagctggtg
     4441 cgacggcgat ttgagcctgc aaatctgtgc cttcaccccc gaaacctgcc aagccgccct
     4501 gcgcgacatc atcaaacaca ccgtccaaac cgccgttatc cgttggagta tcgacgggtg
     4561 gcagcccaaa tccgaacccg gcgcgatggc ggcgcgcaac ctgttgggct tcagggacgg
     4621 cacgggcaac cccaaagttt ccgaccccaa aactgccgac gaggttttgt ggacgggggt
     4681 ggccgccaac agcctcgacg aaccggagtg ggcgaaaaac ggcagctatc aggcagtccg
     4741 ccttatccgc cactttgtcg agttttggga caggacgccg cttcaagagc aaaccgacat
     4801 tttcgggcgg cgcaaataca gcggtgcgcc gatggacggc aaaaaagaag ccgaccaacc
     4861 ggattttgcc aaagaccccg agggtgatat cacgcccaaa gacagccata tacgcctggc
     4921 gaatccgcgc gatcccgaat tcctcaaaaa acaccgcctc ttccgccgcg cctacagcta
     4981 ttcgcgcgga ctcgcctcaa gcggacagct tgatgtcggg ctggtgttcg tctgctatca
     5041 ggcaaacctt gccgacggat tcatcttcgt gcaaaacctc ctcaacggcg aaccgctgga
     5101 agaatacatc agccccttcg gcggcggcta tttcttcgtc ttgcccggcg tggaaaaagg
     5161 cggctttttg gggcaagggc tgctgggcgt ataaatccgc catataaaaa acgccgtctg
     5221 aatccgataa ggggttcaga cggcatttta ctgtttgggc ggtcaggctt ttttgacgaa
     5281 ttcagatttt aaattcatcg cgctgccgtc gattttgcag gcgatgttgt gatcgccttc
     5341 ctgcaggcgt atgcctttga ctttcgtacc ttgtttgatc gtcatcgagc tgccttttac
     5401 cttgaggtct ttgatgagga tgatggtgtc gccgttttgc agcaccgcgc cgttggcatc
     5461 gcgcacttct tcggcggctt cggctgcggc ggattcggtt ttattccatt cgtgggcgca
     5521 ttcggggcag atgtattgtc cgccgtcttc gtaggtgtat tcggaggcgc attgcgggca
     5581 agggggtaat gacatggttt gccgtcctta tcggatgttt gttttggggt gccgtctgaa
     5641 acctgaaacc ggcttcagac ggcatagctt tattgtttgt ctttttcagg acgcacccag
     5701 ccttcgatga cggtttggcg ggcgcgggcg agggcgagtt tgttgtcttc gacattgcgg
     5761 gtaatcgtgc tgcccgcgcc tgtggttact ttgttgccga gggtaacggg ggcgactagg
     5821 acgcagtttg aaccgatgcg cacttcgtcg ccgatgacgg ttttgtgttt gtgcacgccg
     5881 tcgtagttgg caataatcgt accggcgccg aagttggttt tgctgccgac ttcggcatcg
     5941 ccgatgtagg taaggtggtt ggctttggtg cctttgccga tggcggcgtt tttgatttcg
     6001 acgaagttgc cgacgtgtac gtcgtctgca aggcgggctt gcggacgcag gcgggcgtac
     6061 gggccgattc ggttgttttc gccgacttcg cagtcttcga ggtgggagaa gggggcgatt
     6121 ttgctgtttg caccgatttt ggcgtttttg atgacgcagt ttgcgccgat ttcgacgttg
     6181 tcgccgattt cgacttcgcc ttcaaagata cagttcacat caattacgac atcctgtccg
     6241 tgtttcagac ggcctcgtaa atcgaaacgt gccgggtcgt gcagggtaac gcctgctttg
     6301 agcaattctt gcgcctgtcc ggtttggaag atgcgttcga gttcggcgag ctggcgtttg
     6361 ttgttcacgc cggcggcgag gtgggaggcg cggacttgga cgggatgaac tttaataccg
     6421 tcggcaacgg ctttggcgat gaggtcggtc aggtagtatt cgccttgggc attgttgctg
     6481 gaaaggctgt tcagccagtt ttccagtttg gcgttgggca ggacgaggat gccggtgttg
     6541 gtttctttca cggctttttg ggcggtatcg gcgtcttttt cttcgacaat ggcggttacg
     6601 ctgccgctgc cgtcgcggat gatgcgcccc aaacctgacg ggtcggcggg cacgtcggtc
     6661 aacagcccga cttcgttgcc tgcggcttcg agcagggttt cgagggtttc aacgtcaatt
     6721 aaaggaacgt cgccgtacaa caccagcgtg cggccttcgg cggcaaggtg gggcagggcg
     6781 gttttgacgg cgtggccggt gccgagctgt tcggtttgtt caacccagac gacatcgcgt
     6841 ttgacggtgt ctaaaacttg ctctttgccg tggccgacga cgacgcagat gttttgcgga
     6901 ttcagcgcgg cggcggtgcc gataacgcgc ccgagcattg tttcgccgcc gatttcgtgc
     6961 aaaaccttgg gcattttgga atacatgcgc gtgcctttgc cggcggcgag gatgacgatg
     7021 tttaaagtgt tttgcggcat agcgttttcc tgtgcaatgc cgtctgaaag ggcttcagac
     7081 ggcatagggt gggtttatcg gttttgaaat ttgggctttt gccagtgttg gcgatgctct
     7141 tcgtcggcgt tgttgccggt ttggttgggt aacacggcat ggcgttcggg acggtattgg
     7201 ttgtagttca tatttttcga gtagctgccg tcttggtaat aaacgggcgt gccggcggga
     7261 tatttttgac ggacggcggt cttgccgttg ccgtcttgat aagtttccca cgcgcagccc
     7321 gacaaaaggg cggcggtggt catcaggata aggaaggttt tacgcatggc ttttctttcg
     7381 tattttcagg atttagaggg tattgtaatg agtttggcgg tgttctgaca aagtttctgc
     7441 ataccgagcc agttgcgcca tatcgcgtgc gcaggcgtcg ataaaggaca gcgcgtggga
     7501 ttttgcaccg aaccagacgg ttttcatgcc caatgctttt gcctgatgca ggttgtccgc
     7561 gctgtcgtcc accataatgc agcattcggg cggtacgtcc aaaaggcggc agacattgag
     7621 atacgcttgc ggattgggtt tgtacagcag tccgaaatca tccgtgccga acagtgcgtc
     7681 gaaacggttt tccaaaccga gtgcgccgac aacggcacgg acgtaaaacg acggaccgtt
     7741 ggaaaaaacc gccttgcgcc cgttcagacg gcatagggtg tgttccgtat ccgccatgcc
     7801 gtgcagcttg gtcaggattg catcgatcgg atggctttcg cgtaaaaatt cggcgatgtc
     7861 gatttcggga tggtggattt gcagtccggc gagcgttgcg ccgtagcggt gccaatattc
     7921 ctgacgcagg tcggacgcgg cggattcgga gagtttgagg cggcgtgcca tatagcgtgt
     7981 catagcgcgg ttgatgagtg tgaagatgcc tgcgtcggca tcgtgcagcg tgttgtcgag
     8041 gtcgaacagc cacacggtcg ggttttcttg cattttgaac cgtgaaaatt tgttagaatg
     8101 ttattttaca gcgaatagag gaggactcgg aatgaaacgg aaaatttggc tgctgccgct
     8161 gctggcggtt tcggcatacc tgcaggcgca gacggaagtc aggctggcgg tgcataagtc
     8221 gttcagcctg cccaaagggc tgattgcgcg cttcgagcgg gcaaacgatg cgaaggtgtc
     8281 gattattcag gcgggcggcg cgaacgaaat gctcaacaaa ctgattttga gccgcgccaa
     8341 cccgatcgcc gacgcggtgt acggcttgga caacgccaat atcggcaagg cgcgggaaat
     8401 gggcattttg gcggcggcgc aacccggatc cgcccccgtc gcggtcgggc tgccttcggc
     8461 tttggcggtc gattacggct atgtgtccat caattacgac aaaaaatggt ttgaaggcaa
     8521 aaagcttcct ctgccgcaaa ccctgcagga tttgacccgc cccgaatata aaaacctatt
     8581 ggtcgtgccg tctcccgcca cgtcgtcccc ggggctgggc ttcctgatgg cgaacatcag
     8641 cggtctgggc gaagaaggcg cgttcaaatg gtgggcacag atgcggcaga acggcgtgaa
     8701 ggtcgccaaa ggctggagcg aggcgtatta caccgacttt tcgcacaacg gcggcgcgta
     8761 tccgctggtg gtcggttatg ccgccagccc ggcggcggaa gtgtattttt ccaaaggcaa
     8821 atacagcgag ccgccgacgg gcaacctgtt tttaaaaggc ggcgtattcc gccaggtcga
     8881 aggcgcggcg gtcttgaagg gcgcgaaaca gccggaattg gcggcaaaac tggtgcaatg
     8941 gctgcaaagt cgggaagtgc agcaggcggt tccgtccgaa atgtgggttt accccgccgt
     9001 caaaaacacg cgcctgcccg acgtgttccg cttcgcccaa gccccgacgc acaccaccgc
     9061 ccccgcgcag cgcgatattg atgcgaacca gcgcggatgg gtttcccgtt ggattagaac
     9121 ggttttgaaa taaaacaaac ataccgcccc gcagggcttc atacggcatt tttacacctg
     9181 tgccgattac gccgcacggg gcggatgttc gatcaagagg aaaacaatgg acttcaaaca
     9241 atttgatttt ttacacctga tcagtgtttc cggttgggag catctggctg aaaaggcgtg
     9301 ggcgttcggg ctgaaccttg ccgccgcgct gcttattttt ttggtcggaa aatgggcggc
     9361 gaaacgcatt gtcgccgtga tgagggcggc gatgacgcgc gcgcaggtcg atgccacgct
     9421 gattagtttt ttgtgtaatg ttgccaatat cggcttattg attttggtga ttattgccgc
     9481 attgggcaga ttgggcgttt ccacaacatc cgtaaccgcc ttaatcggcg gcgcgggttt
     9541 ggcggtggcg ttgtccttga aagaccagct gtccaatttt gccgccggcg cgctgattat
     9601 cctgttccgc ccgttcaaag tcggcgattt tatccgcgtc ggcggttttg aaggatatgt
     9661 ccgagagatt aaaatggtgc agacttcttt gcggacgacc gacaacgaag aagtcgtgct
     9721 gcccaacagc gtggtgatgg gcaacagcat cgtcaaccgt tccacactgc cgctgtgccg
     9781 cgcccaagtg atagtcggcg tcgattacaa ctgcgatttg aaagtggcga aagaggcggt
     9841 gttgaaagcc gccgtcgaac accccttgag cgttcaaaac gaagagcggc aggccgccgc
     9901 ctacatcacc gccttgggcg acaatgccat cgaaatcaca ttatgggctt gggcaaacga
     9961 agcagaccgc tggacgctgc aatgcgactt gaacgaacaa gtggtcgaaa acctccgcaa
    10021 agtcaatatc aacatcccgt tcccgcaacg cgacatacac atcatcaatt cttaaacgcc
    10081 gtctgaaaga ggagtgggaa atggacgcgc tgcacaccat cgcccgaaac ctgacgaaaa
    10141 aacgtcaaac cgtaagctgt gccgaatcct gcacgggtgg gctgcttgcc gccgtattca
    10201 caagcgttgc aggcagttcg caatggttcg atcaaagttt tgtaacatac agcaacaaag
    10261 ccaaagaaga ccgcttgggc gtgttgcccg aaaccctgct cgaacacggc gcggtcagcc
    10321 gccaaaccgt ctatgagatg gcgcgcggcg cgaaagccgt ggcgcaggcg gattacgccg
    10381 tcggtatttc cggcatcgcc ggtccgggcg gcggcagcga aagcaaaccc gtcggcacgg
    10441 tttggttcgg gtttgccttt ccgggcggaa gttgcgaagc aatgcgccgt tttgacggca
    10501 accgcgaatc cgtccgcgcg caggcggtcg ccttcgcgtt ggaacggttg gcggggctga
    10561 ttgaaaacgg cggcgatgcc gtctaaacaa aatctccgtc tggacaaaat ccccgccgga
    10621 taaaaaatac cgtctgaaac gttgcaggtt tcagacggta ttttgtcggg ttaggcggcg
    10681 gtgcggctta tttcacttta ctcttcaacg cgccgtagcc tgccgcgtcc atttgttcca
    10741 gcgggatgaa tttcaagctc gcgccgttga tgcagtagcg cagtccgcct ttgtcgcgcg
    10801 ggccgtcggg gaagacgtgc cccaagtgtg agtcggcggc gtggctgcgc acttcggtgc
    10861 ggcgcatgtt gtagctgaaa tcatcgtgtt cggtaacgga ttttgcatca atcgggcgcg
    10921 tgaagctcgg ccagccgcag ccggaatcat atttgtcggc ggagctgaac aaaggttcgc
    10981 cgctgacaac gtccacataa atgccgggtt tgaacaaatg gtcgtattcg tggctgaagg
    11041 catattcggt cgcgctgttt tgggtaactt ggtattgctc ttcggtcagg gtgcgtttga
    11101 gttcggcgtc actcggtttt ttatacgttg ccgcgtcgaa gcctttgcct tgcggtgcgg
    11161 tcttggtttt gcccggcagc ggttcgtcgg ctttgcggat atcgatgtgg cagtagccgt
    11221 tggggttttt aatcaagtag tcctgatggt attcctcggc atcgtagaag tttttcagcg
    11281 gctcgttttc aacaacgagg ggcagttggt atttttgctg ctcgcgtttg agggcggcgg
    11341 cgatgacggc tttttcggcg gggtcggtgt agtacacgcc gctgcggtat tgcgtaccgg
    11401 tgtcgttgcc ctgtttgttg aggctggtcg gatcaacgac gcggaagaaa tattgcagga
    11461 tgtcgtctag gctgagtttg tcggcatcgt aggtcacttt gacggtttcg gcgtggcccg
    11521 tatggcggta ggacacgtct tcatagctcg gatttttcgt gttgccgttg gcgtagccgg
    11581 ataccgcgtc aaccacgccg tcgatgcgtt ggaaataggc ttccaagccc cagaagcagc
    11641 cgccggcgag gtaaatggtg cgtgtgttca tgatttttga atcctttttc tgagtgtcgg
    11701 gtttgtagaa cgaatgtttc aagctgccca aatcggcatt cgggtcgcgg attaacgcca
    11761 acgcctgcgc ttcgttgatg ctgcctttga cgatgcgctg cacgtcgccg tctttaccga
    11821 ttaacgccca cgaggggtaa acgctgatat tcaggctttg ggcgatggtg ccgccgttgt
    11881 cggttacgac gggcagcttg ggataattca aaccggcata ccatttttgg aagtcgccgt
    11941 cttttttctc gtgcaaaaag cccggagacg cgacggtaat caggttggcg gagctgaatt
    12001 ttgcatcttg cgcccatttt tcggtctgtc ccaattcgga cagacacaaa ggacaccagc
    12061 ttgcccaaaa tttaatcagc gtcggtttgt cttttttcaa gtaaacactg gcggggcggt
    12121 tgtctgcggt tttcaaagtg gataaagtgt gcggcacggt cgcggctccg gcatcgacga
    12181 ttttgggcga acaagcaccc agcgcaagca ggcagccgaa cttggcgcaa agggaaaaga
    12241 aagtacggtg tttcatttta atgtttcctg tgtggacggt ttgcatgatt agacgtttga
    12301 gatgccgaaa ccttacagcc cggattttca gacaaccttg ccgcgcaaaa tacgctacaa
    12361 tacaccctat ttcaagtttc taaaattaaa aggaaaattc aatgttcagc ttcttccgtc
    12421 gcaagaaaaa acaggaaacg ccggctcccg aggaggctca agttcaggaa actgcagcaa
    12481 aagcagaatc cgaagttact caaatagttg aaaatattaa agaagaagtc gaatctttaa
    12541 cggaaagcgt caaagggcag gtcgaatcgg ctgttgaaac cgtcagcggt gcggttgaac
    12601 aggtaaagga aaccgttgcc gagatgctgt ctgaagcaga ggaagcggcg gaaaaagcag
    12661 cggaacaagt cgaagcggca aaagaagccg ttgccgaaac cgtcggcgag gctgtcgggc
    12721 aagttcaaga agccgttgcg acaactgaag aacacaagct cggttgggcg gcgcgtttga
    12781 aacaaggttt gaccaaatcg cgcgacaaaa tggcgaaatc gctggcgggc gtgttcggcg
    12841 gcggacaaat cgacgaagat ttgtacgaag agctggaaac cgtgctgatt accagcgata
    12901 tgggcatgga agccaccgaa tacctgatga aagacgtgcg cgaccgcgtc agcctcaaag
    12961 ggctgaaaga cggcaacgaa ttgcgcggcg cgctgaaaga agccttgtac gacctgatta
    13021 agcctctaga gaaaccgctg gttttgcccg aaaccaaaga gccgtttgtc atcatgcttg
    13081 ctggcatcaa cggcgcgggc aaaaccacat ccatcggcaa actcgccaaa tatttccaag
    13141 cgcagggcaa atctgtgctg cttgccgccg gcgatacttt ccgcgccgcc gcgcgtgagc
    13201 agcttcaagc ttggggcgaa cgcaacaacg taaccgtgat ttcgcaaacc acgggcgatt
    13261 ccgccgccgt gtgcttcgat gccgtccaag ccgccaaagc gcgcggcatc gacattgtgc
    13321 tggccgacac cgccggccgc ctgcccacgc agcttcactt gatggaagaa atcaaaaaag
    13381 tgaaacgcgt gctgcaaaaa gccatgcccg acgcgccaca cgaaatcatc gtcgtgcttg
    13441 atgccaatat cggtcaaaac gccgtcaacc aagtcaaagc ctttgacgac gcattggggc
    13501 tgaccggttt aattgttacc aagctagacg gcacggcaaa aggcggcatc ctcgccgcgc
    13561 ttgcctccga ccgccccgtc cccgtccgct atatcggcgt gggcgaaggc atagacgatt
    13621 tgcgcccgtt tgacgcgcgc gcgtttgtgg acgcactgct ggattgagcc gaaatgccgt
    13681 ccgaaaacag cagaccgatg ccgtcattcc cgcgcaggcg ggaatccaga ctgtcgggca
    13741 tctgcagcgg tttgctaaaa aacgctttac cgtgatcagt gtgcaaagtt aaaatgggga
    13801 ggtaagcttt tcaaccagca attcggcggg cgcggaatcg ggcggtttac cgaacctcgg
    13861 cgttcgcggc gcgccgcccc gtcccgtgaa ggcaaactca aggaataaaa gatgaataaa
    13921 acttggaaac ggcaggtttt ccgccatacc gcgctttata ccgccatatt gatgttttcc
    13981 cataccggcg ggggggggcg caggcgcaaa cgcaaacgca taaatacgct attgtaatga
    14041 acggacaaaa gctgcccgag gtaaagtggg ggactggcta tagaaatttg gcgcaaaaaa
    14101 gcaatgaacg ccaatttacc catacgagtg gtttcggcat caaaaaaaac gtaactttat
    14161 cattcaataa taccgatgaa gttgttgctc aaaaaaacgg tactgtcgtt ttcggcgcgg
    14221 cgacctacct gccgccctac ggcaaggttt ccggttttga taccgctaag ctgaccgagc
    14281 gcggcaaagc cgttgattgg attcgtacga cccacccggg gttgataggc tacagctacg
    14341 aaaatgtcac atgcagcaat aactactaca acgccagcag cggctgtcct gaacttagct
    14401 ataaaaccca atttaccttt ggtaatcaag ggttgaaaag aaagacaaac ggcaggctgg
    14461 atatagacga agacaaaagc cgcgacggtt cgcccattta caaattgcag aattatccct
    14521 ggttgggcgt gtctttcaat ttgagcagcg agagcctcgt caaatcaata aaatacaata
    14581 aaattatatc ttcttttagc gaggacgtga cgcagagcaa tggtacgaac agccaataca
    14641 aagacaaaaa cctcgtttat acgacaggcg attaccagta taagaataaa tattcttccc
    14701 gttatgtcgg gcaggacgaa cactccgccg tcgcctttta tctgaacgcc aaactgcacc
    14761 tgctggataa aaaacaaatc caaaatatcg cgcaagtcag tgaacttaat tttggtacgt
    14821 tgagaacgct catcgagccg acggaagagt ggaaaaaaaa gaggacgaac ttttttcaag
    14881 gtggtaattg gacgtttgaa gataaaggag aagtcagcgt caaactcaaa ttgccggaag
    14941 tcaaagcagg ccgctgcgtc aacaaaaata accccaatcc caatgccaaa gccccctccc
    15001 ccgcactgac cgcccccgcg ctgtggttcg gacctgtgca aaatggtaag gtgcagatgt
    15061 attccgcttc ggtttccacc taccccgaca gttcgagcag ccaaattttc ctgcaaaacc
    15121 tttcccgcaa ggatgacaca agcaaaccgg gccgctattc cctcaaaccc ttgagtatgt
    15181 cggagattaa aagtaaagag ccgaatttca cagggcggca aaccgtcatc cgattggata
    15241 gcggcgtaca gcagatcaaa cttcaaggca atgaggtcgc caattt
//
LOCUS       DBBZXW010000040        15232 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.040, whole genome shotgun sequence.
ACCESSION   DBBZXW010000040 DBBZXW010000000
VERSION     DBBZXW010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.040"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            275..1429
                     /gene="obgE"
                     /locus_tag="ACJJD2_001118"
     CDS             275..1429
                     /gene="obgE"
                     /locus_tag="ACJJD2_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HGG7579670.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            1512..2561
                     /locus_tag="ACJJD2_001119"
     CDS             1512..2561
                     /locus_tag="ACJJD2_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG7579671.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            3249..4670
                     /gene="cysS"
                     /locus_tag="ACJJD2_001120"
     CDS             3249..4670
                     /gene="cysS"
                     /locus_tag="ACJJD2_001120"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HGG7579672.1"
                     /translation="MTTIYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            4841..5620
                     /locus_tag="ACJJD2_001121"
     CDS             4841..5620
                     /locus_tag="ACJJD2_001121"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG7579673.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            5607..5951
                     /locus_tag="ACJJD2_001122"
     CDS             5607..5951
                     /locus_tag="ACJJD2_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579674.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPIWALVWLLICLPCLLIASKCLGWKGWRLLANVLACLAVRTLLSVPAT
                     LLIAFTLQDLLK"
     gene            5961..6491
                     /locus_tag="ACJJD2_001123"
     CDS             5961..6491
                     /locus_tag="ACJJD2_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7579675.1"
                     /translation="MESFELEDLTLWLVRDADEAEMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLQTAFERIRGKYVAVVAHGAGAAAFLAWLYQVDILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVPEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(6584..7699)
                     /gene="asd"
                     /locus_tag="ACJJD2_001124"
     CDS             complement(6584..7699)
                     /gene="asd"
                     /locus_tag="ACJJD2_001124"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HGG7579676.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAIHAKVADELADPSSAILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHS
                     QALTLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLEMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            7875..8456
                     /locus_tag="ACJJD2_001125"
     CDS             7875..8456
                     /locus_tag="ACJJD2_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG7579677.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(8518..9372)
                     /gene="folD"
                     /locus_tag="ACJJD2_001126"
     CDS             complement(8518..9372)
                     /gene="folD"
                     /locus_tag="ACJJD2_001126"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HGG7579678.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            9595..9672
                     /locus_tag="ACJJD2_001127"
     tRNA            9595..9672
                     /locus_tag="ACJJD2_001127"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9630..9632,aa:Pro,seq:tgg)
     gene            9697..9773
                     /locus_tag="ACJJD2_001128"
     tRNA            9697..9773
                     /locus_tag="ACJJD2_001128"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9731..9733,aa:Arg,seq:tct)
     gene            9801..9876
                     /locus_tag="ACJJD2_001129"
     tRNA            9801..9876
                     /locus_tag="ACJJD2_001129"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9834..9836,aa:His,seq:gtg)
     gene            10012..10518
                     /gene="rfaE2"
                     /locus_tag="ACJJD2_001130"
     CDS             10012..10518
                     /gene="rfaE2"
                     /locus_tag="ACJJD2_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HGG7579679.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGDALVLALNTDASVRRLGKGGDRPVNPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            10515..12293
                     /locus_tag="ACJJD2_001131"
     CDS             10515..12293
                     /locus_tag="ACJJD2_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HGG7579680.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            12406..13230
                     /locus_tag="ACJJD2_001132"
     CDS             12406..13230
                     /locus_tag="ACJJD2_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HGG7579681.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(13993..14781)
                     /locus_tag="ACJJD2_001133"
     CDS             complement(13993..14781)
                     /locus_tag="ACJJD2_001133"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HGG7579682.1"
                     /translation="MLTLYSETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     AGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPYTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(14995..15189)
                     /gene="thiS"
                     /locus_tag="ACJJD2_001134"
     CDS             complement(14995..15189)
                     /gene="thiS"
                     /locus_tag="ACJJD2_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HGG7579683.1"
                     /translation="MNIILNGGPAELHGTTVADLIAQTAPQKPFAVAVNTGFVAKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         3647 a         3859 c         4217 g         3509 t
ORIGIN      
        1 aaacttatta tatgtaacgg tttgaacgga cattccgtcg ggtcggaatg tcaaaaaggc
       61 gcgattgtac caaagaagtt ggacataatt ttgtttgcag gctgaagatt tgcttaaaaa
      121 ttcattaaga tgggcggaac aaatagtttg ggtacggcgt gttgaaatac cgcttatccc
      181 ttataatagc gtccgaaatt ctgttcggac ggcatcaaaa cacacggtaa tccgtctgaa
      241 ccccccattt gaaaccaaca aacaagagca ttgaatgaaa ttcatcgacg aagcaaaaat
      301 cgaagtcgcc gcaggcaaag gcggtaatgg cgcaaccagt ttccgccgcg aaaaattcgt
      361 accgcgcggc ggcccggacg gcggcgacgg cggcaaaggc ggcagcgtct gggcagaagc
      421 cgacgaaaac accaacaccc tcgtcgaata ccgcttcgtt aaacgctacc aagccaaaaa
      481 cggcgaaaaa ggccacggtt ccgaccgtta cggcgcaggt gcggacgaca tcgtcctcaa
      541 aatgcccgtc ggcaccctca tccgcgacct cgacaccgac gaaatcgttg ccgacctcac
      601 ttaccacgga cagcgcgtct gcctagccaa aggcggcaaa ggcggcttgg gcaacatcca
      661 cttcaaatcc tccgtcaacc gcgccccaaa acaatccacg cccggcgaag aaggcgaagc
      721 ccgttccctg caactcgaac tcaaagtcct cgccgatgtc ggcttattgg gtatgcccaa
      781 cgccggcaaa tccaccctga ttaccgccgt atccgccgca cgccccaaaa tcgccaacta
      841 ccccttcacc accctgcatc caaacttagg cgtggtacgc atcgacgaaa accacagctt
      901 cgtgatggcc gacatccccg gcctgattga aggcgcggca gaaggcgcgg gtttggggca
      961 tcgtttcctc aaacacttat cgcgcaccgg attattgctg cacgtcgtcg atttggcgcc
     1021 cttcgacgaa accgtcaacc ctgccgaaga agcacttgct atcatcaacg aattgcgcaa
     1081 atacgatgaa gaactttacg gcaaaccgcg ctggctggtg ctgaataaac tcgacatgct
     1141 tgacgaagaa gaagcccaaa cgcgcactgc cgccttcctc gaagccgtcg gctgggacta
     1201 ccccaaaccc gacgaccgtt tccaatttga catggaaacc ccgcgcctct tccaaatcag
     1261 tgcgctgacc caccaaggca cgcaggaatt ggtacaccaa atcaaccaat acctgaccga
     1321 gaaaaaacgt atcgaagctg aaaaagccga agcggagaaa gcagcggcaa atgttgaaat
     1381 tatcgaacag cagcctaaaa cggatacagg cgtgtttaag ccggagtgaa aaaagaaagg
     1441 gtttcagacg atatttgttc tacaaaaggt tgtttgaaac aattttaaag caagattgaa
     1501 atggattaaa aatgtcatct aaccaatata tccagtcgct tgagttgaca aactttaccg
     1561 ttcttccaaa cgatactttt gaattttctg aaaatctcaa tgttattgtt gccgaaaacg
     1621 gttgtggcaa aacacatttg ttaaaaattt tatacagcct gctagaagta acatctaaca
     1681 ccaaaaacag attactgaaa acagaattgc aaaaaagttt tgccgataaa ttactgaatg
     1741 ttttccgtcc cgattccttg ggcaggttga gcaaacgttt gcaggggcgc gggcgtacgg
     1801 aaatcgtttt aaaactgcaa aacggcacta cgcatagtag tctgaatttt tccagtaact
     1861 catcatcgca agtcaatgtt caaagcatcg gattgaaaga aaatgaatat actccgacac
     1921 ctatcttctt acccagccgc gaattaatta cactttgccc ttggttcact tctttgtatc
     1981 aaaaccaaag catccctttc gaagaaactt ggtttgatac ctgtatgcaa ttaaatcacc
     2041 cgcttgccaa aggccccaga gaaacaaaaa ttcgagaatt gctcgaacct attgagaacg
     2101 cgatgggcgg aaaagtatct gaagaacaag gaaggtttta tctatcgctg acaaatacgg
     2161 gcggtaagat tgaagcacct ttggtagcag agggtttgcg gaaatttgtc atgattgccc
     2221 ggttaatcgc aacaggggca ttgctggata aaggctatct attttgggat gaaccggaag
     2281 ctaatctgaa tcctaaattg atcaaagtgg ctgcccgtat tatttggtct ttatctcaac
     2341 agggtattca ggtttttatt gcaacacact ctttattctt attgagagaa ttggaacttt
     2401 tgaagcttga aaataacacg gatttacctg tacgtttttt ctcgttgatt gcttccgatg
     2461 atggaacaaa agtggagcaa gggaacagta ttaatgattt gaacacattg atattgttag
     2521 atgaaaacat tatgcaggca gacaggtatc tgaatatttg aggttaagct atgactacaa
     2581 tcacagaaaa gagattaacc tttgcttttc ctgaagatta ttacgttacc aagtatgacg
     2641 aatgggaaca ttataaaatt tttcagaaca gttgtaattt acgtaataaa attgatacaa
     2701 atgaaaaggg aaagaacggg ataaatcaaa gtgtagatga cgataatggc agctcaggtg
     2761 tagatataat agcccttcat gagtcgacac tttggctaat cgaaattaaa gattattacc
     2821 gacttgggct tgagccaaat gcccaatcaa tagatgaaaa actttctgac ctaccatatt
     2881 taatcgcaag aaaaattcga gattcattgg caggattggt ttctgctaaa tttaaagcag
     2941 aaaaacagga agaaaaagat ttttctcgct tggctttaga ttgtaacgaa ataaaaatag
     3001 tccttcatat tgaaatgcct agtataagaa gtaaacttta tccctcgtca tcagatttag
     3061 caaacttatt aaaagataag tttaaattat cagaatttac aaaaaatttt gcaaactgtt
     3121 atgcagaacc aattttcaca aatatcagcc atattaataa tccgcaactg cgtaatgttc
     3181 cttggtccgt atctacagga acagaacaga aattatcatc cgagcaacaa agattaatcc
     3241 ataatcccat gaccaccatc tacaacaccc ttacccgtca aaaagaactc ttcgccccca
     3301 tcgatccgaa aaacgtgcgt atgtacgttt gcggcatgac cgtttacgac tattgccact
     3361 taggccatgc ccgtgtgatg gtggtgtttg acatgattgc ccgctggttg cgcgagtgcg
     3421 gctatccgct cacttatgta cgcaacatca ccgacatcga cgataaaatc attgcccgtg
     3481 cggctgaaaa cggcgagact atcggcgaac tgaccgcgcg tttcattcag gctatgcacg
     3541 aagatgccga tgctttgggc gtgttgcgtc cggatattga gccgaaggca acggaaaaca
     3601 ttccgcaaat gattgccatg attgaaaccc tgattcaaaa cggcaaggca tatcctgccg
     3661 caaatggcga cgtttactac gccgtgcgcg agtttgccgc ttacggacaa ctgtcgggca
     3721 aatcgttgga cgacctgcgc gcgggcgaac gcgtggaagt ggacggtttc aaacgcgatc
     3781 cgcttgattt tgtattgtgg aaagcggcga aagcaggcga accggcgtgg gaaagcccgt
     3841 ggggcaacgg ccgtccgggt tggcacattg aatgctctgc catgagtgaa aacctgttcg
     3901 gcgatacctt cgacatccac ggcggcggcg cggatttgca gttccctcat catgaaaatg
     3961 aaatcgccca aagcgtcggc gcgacggggc atacctgcgg tcatcatcac gcgcaaaccc
     4021 accacgggca aagcatcgcc agccacgtca aatattggct gcacaacggc tttatccgcg
     4081 tggacggcga aaaaatgtcc aaatcactgg gcaacttctt caccatccgc gaagtgttga
     4141 aacaatacga ccccgaagtc gtgcgcttct tcatcctgcg cgcccactac cgcagcccgt
     4201 tgaactattc cgacgcgcat ttggacgatg caaaaggtgc gctgacccgt ctgtacacca
     4261 ccttgaaaaa cacgccggcg gctgagtttg atttatccga aaacgccaac ggctacaccc
     4321 gccgcttcta cgccgccatg aacgacgatt tcggtacggt cgaagcggtt gccgtgttgt
     4381 tcgaactggc aggcgaagtg aacaaaacca atgacgcaca gctcgccggc tgcctgaaag
     4441 ccttgggcgg catcatcggc ctgctgcaac gcgacccgac cgagttcctg caaggcagcg
     4501 cggcttcaga cggcctctcc aacgaagaaa tcgaagactt gatcgcccgg cggaaacagg
     4561 cgcgcgccga taaaaactgg gcggaatccg accgcatccg cgaccttctg aacgaacaca
     4621 aaatcatttt ggaagacaac gccggcggca cgacttggcg gcgcggttga actgtatcgg
     4681 aaagggcaaa agtaccgcct tttgctcttt ttccgttttc agacggcatt tcccgcttga
     4741 agccccgccg ttttcagcag gcagggttga atgggaaatg ccgggcggcg caccaggtgc
     4801 cgttttgtgt atgggaacat tgtgagaact tatttttatt atgcttaaaa tcatttccgc
     4861 caacgtcaac ggcatccgct ccgcctacaa aaaaggtttt tacgaataca tcgccgcatc
     4921 gggcgcggac attgtctgcg tgcaggaact caaagcgcag gaggctgatt tgtctgccga
     4981 tatgaaaaat ccgcacggga tgcacggcca ttggcattgt gccgagaagc gcggttacag
     5041 cggcgtggcg gtgtacagca aacgcaaacc cgacaatgtg caaatcggta tgggcattga
     5101 agaattcgac cgcgaagggc ggtttgtgcg ttgcgatttc ggcaggttga gcgttatttc
     5161 gctttacttg cccagcggca gcagcgcgga agaacgccag caggtgaaat accgtttcct
     5221 cgatgcgttt taccctatgc tcgaagcgat gaaaaacgaa gggcgcgaca ttgtcgtttg
     5281 cggtgactgg aacatcgccc accaaaacat cgacctgaaa aactggaaag gcaaccagaa
     5341 aaattcaggt ttcctgcctg aagagcgcga gtggataggc aaggttatcc acaagctcgg
     5401 ttggacggat atgtggcgca cgctttatcc cgatgtgccg ggctacactt ggtggagcaa
     5461 ccgagggcag gcgtatgcga aagatgtcgg gtggcgcatc gattatcaga tggttacgcc
     5521 cgaacttgcc gccaaagccg tgtccgcaca cgtttataaa gatgaaaaat tttccgacca
     5581 tgcgccgctg gtcgtggagt atgactatgc tgccgaataa agttttgggt aaatatgatt
     5641 ggaatgtgga cggaaaaaca ggaataggcg cggcatgggt tgtcgctgcg tttatcctgc
     5701 ccatattggt gtgggcgata tttatgttgt cgcggatgca aggctggctt gcgccgacca
     5761 aggcaaaccc gatatgggcg ttggtgtggc tgctgatttg cctgccctgc ctgctgattg
     5821 cgtccaaatg tttgggttgg aaaggctggc ggctgttggc aaacgttctt gcctgcctcg
     5881 ccgtgcgcac cctgttgagt gtgcctgcca cgctgctgat tgcgttcacg ctgcaagacc
     5941 tgctcaaata ggcgcggaca atggaaagtt tcgagcttga ggatttgacg ctgtggctgg
     6001 tacgcgatgc ggatgaagcg gaaatgtgga tagaccgctg ggcgatcagt tatcccgtcg
     6061 tgcagatgtc cgaagcgtcg gccggtcaaa gcatagggga atggcaggca gggcttcaga
     6121 cggcatttga acgcatacgc ggcaaatacg tcgccgttgt cgcacacggt gcgggcgcgg
     6181 ccgcattttt ggcgtggctg tatcaggtag acatcctgac acggaagaaa attgccaaca
     6241 tcatccttgt accgcagcgt cccgatattt ttcccgacga tgcggaacac actttccaac
     6301 gcgtccgctg tccctgccgt gccgcattgg ttgtacccga acacggcggc gtgccgcacg
     6361 gttgggcgca aaaacaggcg gatttgtgga acgcccgcct gttggtttcc ccgcattcgg
     6421 gcagtttgaa cggtatgctc ggcggctggc agtggggtat gaagctgatg caggaaatgt
     6481 tgctggcgtg aacgcttgcc ttatcggaat ttcggttaac tggggttgca aggaaaatgc
     6541 cgtctgaaac aggcttcaga cggcatttcc attcaaacag ggcttacagg ctgcccaaca
     6601 cgatacgcag cacgcggcgc aacggctcgg cagcccccca caagagttgg tcgccgacag
     6661 tgaacgcgct gatgtattcg ccgcccatct ccagtttgcg gatacggccg acaggaacag
     6721 acagtgtgcc ggtaactttg gcaggagtca gctcgtgtat gctggcttct ttttcgttag
     6781 ggatgacttt cacccagtcg tttgcacctg ccaaaatcgc ttcgatttcg gaaacaggca
     6841 ggtctttttt cagcttcagg gtgagggctt ggctgtggca gcgcatagag ccgatgcgta
     6901 cgcataagcc gtcgattacg gtcggattgt cgctgcggcc gaggattttg ttggtttcca
     6961 caccgccttt ccattcttct ttagattgac cgttgcccaa atccacgtca atccacggaa
     7021 tcaggctgcc ggcgagcggt acgccgaagt tggctttcgg atagtcttcg ctgcgcagga
     7081 aatcggacac tttgcggtcg atgtcgagaa tcgcgctgga aggatcggca agctcgtccg
     7141 ctactttggc gtgaatcgcg cccatgccgc tgatgagttc gcgcatgttt ttcgcacccg
     7201 caccggaagc ggcttggtag gtcatgctgg ttgcccattc gaccaaatcg ttttggaaca
     7261 gaccgcccaa agccatcagc atcagggaaa cggtacagtt gccgccgatg tagtttttca
     7321 cgccgttttt gaggccgttg tcgatgacgt tgcggttgac cgggtcgagg acgataatcg
     7381 catcgtcttt catgcgcagg gatgacgccg cgtcaaccca gtagccgttc cagccgctgt
     7441 cgcgcagggg ttggaagacg gatttggtgt aatcgccgcc ctgacaggta acgatgatgt
     7501 ccatttttgc caattcggca acatcgttgg catccaacaa tgttttggct gcctgaccga
     7561 aatcaggggc tgcgccgccg acgttggaag tggtaaagaa aaacgcttca ggaatgtggg
     7621 cgaagtcgtt ttcttctttc atacgctgca tcaaaaccga accgaccata ccgcgccagc
     7681 cgacgaaacc tactttcatt gtgttgctcc ttgaggaaaa atcgttaata aaattatgta
     7741 tggcgtaaag gaagcgtttt aacgccgtat tgggaaaatg taaagttctt tatcgggctt
     7801 tctttaagta ttggcgtttt cggtgtcgtg gcggtagaat cggggtcagt taagaacaat
     7861 tatcaggaac ggatatggaa gaaaaaaacg actacaccga cgcggcatcc gacaaccgca
     7921 acgggcagga aattgaagtc ggaattgccg gcgcaggcga ccggatactt gccgcgctgc
     7981 tgaaccaatt gtttaccttt ttggttttgt tggtgccgtt tgccggactg attgctttcg
     8041 ccatcaagaa tgaaggcagg attggcggca gtgaggaaat attcgggctg cttttgggca
     8101 tgacttcctt ttgggtagga ctggcgggca ttttggttta taccgtcgtt caaatctact
     8161 atatgagtcg ggacgggcag tcattgggta agaagatcat gagaatcagg gtgttgaaaa
     8221 ccgacggccg caatccgggt tttgtcggca cggttttggt acgcgaaatc gcatggtcgg
     8281 ttttggttgc cattattgcc gccgttatcg gtcttgcagt aggtgacaac ggagaaaacg
     8341 ccatcaacct gctggcattc cttgccaact ttgtcctgct ctttatggtc aaacgcgacc
     8401 gccgcacgct ttacgacata ctggcggata cggttgtcgt caagctgccc aaataaacgg
     8461 acacggcaaa atgccgtctg aaagcctttc agacggtatt tttatcttca gaaccgctca
     8521 agcatcgtgc agtgaagccg cgtgcagggt gttttccatc aatgtggcaa tcgtcatcgg
     8581 acccacgccg ccgggaacgg gcgtaatcat cgccgcccgt tcttttgccg tttcaaattc
     8641 cacgtcgccg cacaggctgc catcgtccaa acggttgatg cccacatcaa taacgaccgc
     8701 gccaggtttg atccattcgc ctttgacaaa gttcggaatg cctacgccga ccaccaaaat
     8761 atcggctccg gcaacctcgt ctgtcagatt ttcggttgcg ctgtggcaga ccgttaccgt
     8821 tgcgcgcgcc agcagcagtt ccaaagcctg cgggcggccg acgatattcg acgcgccgac
     8881 cacgaccgct tttttcccct tcggatcaat gccgtaagct tccaaaagcg tcatcacgcc
     8941 cttgggcgta cacgggcgca tcagcggcat tttgaccgcc agcctgccga cattgtaagg
     9001 atggaagccg tccacgtcct tatccggcga aatacgttcc aaaaccgcct ggctgtcgag
     9061 gtgcttcggc agcggtagct gaaccagaat accgtccact tcggaatcgg cattcaggcg
     9121 gtcgaccagt gccagcagtt cttcctgcga tgttgattcg ggcagctcgt aagacagtga
     9181 tttgatgccg catttttggc aggcagtttt cttgttgcgg acataaaccg cgctggcagg
     9241 gtcgcctccg accaaaacca cggccaggca aggcatgtgc agattgtcct gttggcgttg
     9301 cgccaccgct tcggcaaccg cctgcaggcg tttttgcgaa acttctttac cattgatcag
     9361 ttgtgccgac atatccgtcc ttttgttaaa caggtagaaa atgctgaaaa ttatcgcatt
     9421 ttccgtttgt ttttacagca ggatgccgaa aataaatttg ccctgaaata aaatacggct
     9481 gtttggacgg attaaatatt ttttcaaatc aaaaaactat atttttcatc ttggtgtctt
     9541 gaaaataaat attgacgcat ctttccctga gttgtatagt tcgcttcttc aagtcggggc
     9601 gtagcgcagc ccggttagcg catctgcttt gggagcagag ggtcgtgagt tcgaatccca
     9661 ccgccccgac caatcaatca gcacgaatcg gcatgagcgc ccgtagctca accggataga
     9721 gcaccgacct tctaagtcgg gggttacagg ttcgattcct gtcgggcgtg ccaagaattt
     9781 gattgaaaac cgtttttatg gtggctgtag ctcagttggt agagccccgg attgtgattc
     9841 cggttgtcgt gggttcgagc cccatcagcc accccagata aaggcccgta cttttcggta
     9901 cgggtctttt cccgtttgcg cgtactgtcc gcgccgccgg ctttgccttt cgcatatgct
     9961 tctgtatcat gtgggttttt ctgtctttta tggtttttgt cggaggcttt gatggttgac
    10021 gcttggtctg tccctgattt tgaatcgaaa atctgtccgc ccgaggcgtt ggcggcgcgt
    10081 ttggcgttgt tgccgcgccc gctggtgttt accaacggct gtttcgacat cctccacagg
    10141 gggcacgtta cttatctggc gcaggcgcgt tcgatggggg acgcgttggt gctggcgttg
    10201 aataccgatg cttcggtgcg gcgtctgggc aagggcggtg accgcccggt taatcctttg
    10261 gagaaccgtg ccgccgttgc cgccgcgttg gaaagtgtgg atttggtaac gtggtttgac
    10321 ggggatacgc cggcggcgtt gattgaggcg gtcaaacctg agattttggt caagggcggc
    10381 gattgggctg cggataagat tgtcggtgcg gcagaaacgt tggcgcgcgg cggtcaggtg
    10441 ttttcaattc cgtttctgca ccagacttcg acaacgaaga ctttggcaaa aatccgtgcg
    10501 gcagagggcg gaaaatgacg gttttgaagc tttcgcactg gcgggtgttg gcggagcttg
    10561 ccgacggttt gccgcaacac gtctcgcaac tggcgcgtat ggcggatatg aagccgcagc
    10621 agctcaacgg tttttggcag cagatgccgg cgcacatacg cgggctgttg cgccaacacg
    10681 acggctattg gcggctggtg cgcccattgg cggttttcga tgccgaaggt ttgcgcgagc
    10741 tgggggaaag gtcgggtttt cagacggcat tgaagcacga gtgcgcgtcc agcaacgacg
    10801 agatactgga attggcgcgg attgcgccgg acaaggcgca caaaaccata tgtgtgaccc
    10861 acctgcaaag taagggcagg gggcggcagg ggcggaagtg gtcgcaccgt ttgggcgagt
    10921 gtctgatgtt cagttttggc tgggtgtttg accggccgca gtatgagttg ggttcgctgt
    10981 cgcctgttgc ggcagtggcg tgtcggcgcg ccttgtcgcg tttaggtttg gatgtgcaga
    11041 ttaagtggcc caatgatttg gttgtcggac gcgacaaatt gggcggcatt ctgattgaaa
    11101 cggtcaggac gggcggcaaa acggttgccg tggtcggtat cggcatcaat tttgtcctgc
    11161 ccaaggaagt agaaaatgcc gcttccgtgc aatcgctgtt tcagacggca tcgcggcggg
    11221 gcaatgccga tgccgccgtg ctgctggaaa cgctgttggt ggaactggac gcggtgttgt
    11281 tgcaatatgc gcgggacgga tttgcgcctt ttgtggcgga atatcaggct gccaaccgcg
    11341 accacggcaa ggcggtattg ctgttgcgcg acggcgaaac cgtgttcgaa ggcacggtta
    11401 aaggcgtgga cggacaaggc gttttgcact tggaaacggc agagggcaaa cagacggtcg
    11461 tcagcggcga aatcagcctg cggtccgacg acaggccggt ttccgtgccg aagcggcggg
    11521 attcggaacg ttttctgctg ttggacggcg gcaacagccg gctcaagtgg gcgtgggtgg
    11581 aaaacggcac gttcgcaacc gtcggtagcg cgccgtaccg cgatttgtcg cctttgggcg
    11641 cggagtgggc ggaaaaggcg gatggaaatg tccgcatcgt cggttgcgcc gtgtgcggag
    11701 aattcaaaaa ggcacaagtg caggaacagc tcgcccgaaa aatcgagtgg ctgccgtctt
    11761 ccgcacaggc tttgggcata cgcaaccact accgccaccc cgaagaacac ggttccgacc
    11821 gctggttcaa cgccttgggc agccgccgct tcagccgcaa cgcctgcgtc gtcgtcagtt
    11881 gcggcacggc ggtaacggtt gacgcgctca ccgatgacgg acattatctc gggggaacca
    11941 tcatgcccgg tttccacctg atgaaagaat cgctcgccgt ccgaaccgcc aacctcaacc
    12001 ggcacgccgg taagcgttat cctttcccga ccacaacggg caatgccgtc gccagcggca
    12061 tgatggatgc ggtttgcggc tcggttatga tgatgcacgg gcgtttgaaa gaaaaaaccg
    12121 gggcgggcaa gcctgtcgat gtcatcatta ccggcggcgg cgcggcaaaa gttgccgaag
    12181 ccctgccgcc tgcatttttg gcggaaaata ccgtgcgcgt ggcggacaac ctcgtcattc
    12241 acgggctgct gaacctgatt gccgccgaag gcggggaatc ggaacatact taaaaaatac
    12301 accctttttc aacacggggc ggcatccgtc cgaatccgtc cggattctgc cgcccgacag
    12361 actgccgccc aggcgggcgg ggtttcaaac attgaggaaa ttctaatgaa atggctcttc
    12421 acccttttgg cggtactcaa tattgccgta ttcggcggca cggtgggcta taaattggcc
    12481 gttaaagcga cgggcggcgt gccggaaaac cgggccgtcg aaaacacgcc ccccgcaacg
    12541 cccgccgccg acaatgcggc ggcatccgtg gaggatacgg cggcactgct caaaccgggc
    12601 gacatcctga ccgaagagca ggccgagcag ttgcgcttga aaaaggaagc ggaacagaaa
    12661 aaactgaggg agaaaaaaca gcgtgaagaa aaagcccgcc gcgaaaaact cgccgcagaa
    12721 aaggcgcagg cggaacgcga aaacggcgcg gcggatgcct tatgcgccgc gcaggcaagc
    12781 ctcacgatgg acgaagatga ctaccaccgc atcaaaggac ttttgggcaa atggtcgcac
    12841 gttgccagca ggagcgtcga aaaacgcacc gccaaagcca aacctgccga caaaacctac
    12901 cgcgtcgtcc tgcccgtttc cgccgatgcc gaaaatcagg cggcggagct gtctgccaaa
    12961 ggtttcaacc ccataccgtt tgacggcgca ttgagtttgg gtgtcggcaa cagccgggaa
    13021 aacgcccaag ccctgcaaaa ccggcttgcc ggcgccggat tcggcggggc gcatattgtc
    13081 gaacactttg ccgaagccga caggcaggac gattctttga gcgtgtcgcg tatgacggtt
    13141 ttgtttaccg gcgtgaatgc cgccgatgcg gacgaaattc gtaaaatcac gtccctatac
    13201 ggcaaactga acctcaagtc ttgcaaatag gcgcgaaagc cggacgataa acgccaaacc
    13261 caccgcgaag gtgggtttgg cgtttcggtt ttgagtatct gatatataaa aagggaatgt
    13321 atgtctcgta tatgccgact ccaagtgtga aagtgatgat ggggaaatat ggtgtttaat
    13381 ggttcggaac ggacgacttc cgagtggttt tgattatacg ctaataataa taattatcaa
    13441 taaaaattta aaaataaatg cagatttttt gtaatacgat gaaaaataaa caaattaaac
    13501 tatttgccga tgttggtgat tcgggtcggc aaactttcat tgtgtcggac aaatcggggt
    13561 cggcagtcat agctgagggc ttcgtgcctg acggaaataa ggttgcccgt gtttgaacat
    13621 ccgtccgatt gggcgcggac gaggttgtca ttcgggggtg tttgagcgtg gattcgggga
    13681 tgcaaaagcg gtaaaaccgt tgcggatgaa ggcttacgga cggctttagg tatttttaag
    13741 tgtattcaaa caacaacaaa acgcttcttc tattgccgta tttagggctt gcgcggcagc
    13801 ctgcacaccg tggaggccga gtgtttcgtt ggttgcggca tcgggacggg cggcaaggtt
    13861 ttccggccgg tttttccatt ttttccgaca aagccgtgat gccggggaat ggcggtttgt
    13921 ccgtttcgga ccgccgccgt tttgagccgc gatgccgtct gaagccttca gacggcattt
    13981 ttgccgcctt tttcaatatt ccgccgaatg ccaaaacggc tgtccgactg tcggcgtgct
    14041 ggcttgcgct ttgtcgcgtg cttcgaccgg tccggcttca aatgccagcc gtccggattc
    14101 gacggcgagt gcgaaggcgc gtgccatatt gactggatcg ccgctgcggg aaacggcggt
    14161 gttcaaaagc acgccgtcaa agccccattc catcacttgt gccgcctgtg agggcaaacc
    14221 caagcccgcg tcgataatca gcggcgtgta gggcaggcgt tcgcgcagga cgttcaacgc
    14281 gtaggcgtga accgcgccca aacccgtgcc gatcggggcc gcccacggca tcaacgcctg
    14341 acagcccgcg tcgagcaggc ggcggcaggc aatcaggtct tcggtgcaat aaggcagcac
    14401 tttgaagccg tctttaatca ggatttccgc cgcttcgaca agctggaaca catccggctg
    14461 caaggtgtcg tcatctccga tgagttccaa ttttatccaa tcggtttcaa acacttcgcg
    14521 cgccatttgc gccgtcgtta ccgcttcctg cacgctttgg cagcctgccg tgttcggcag
    14581 gacgggaacg ccggtttctt gaagcagcga ccaaaacccc tgaccgtgcg cctcgccgcc
    14641 gcatcccgcg cggcgcagcg agacggtaat catcgcgggc cgggcggttc ggacggattg
    14701 tttgaggatt tcaggggtcg ggtaggcggc tgtgccgagc agcagccgcg aagggaaagt
    14761 ttcgctgtac agggtgagca taatgggttc ctttgtatag tggattaaca aaaaccagta
    14821 cggcgttgcc tcgtcttagc tcaaagaaaa cgattctcta aggtgctgaa gcactaagtg
    14881 aatcggttcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttaaagtt
    14941 aatccaccat aacgttgttt tggggacagg ggtcgtctga aaaggcaaaa ccgcctagcc
    15001 gccgaccacc ggccgcacga tatcgatttt gtcgttttcg tttaaaacgg tttccgcata
    15061 cgcgcctttg gcgacaaatc cggtattcac cgctacggca aaaggctttt gcggcgcggt
    15121 ttgggcgatg aggtcggcaa cggtcgtgcc gtgaagttcg gcgggtccgc cgtttaagat
    15181 gatgttcatg gtttctcgat gtttctgtat ttatagtgga ttaacaaaaa cc
//
LOCUS       DBBZXW010000041        15191 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.041, whole genome shotgun sequence.
ACCESSION   DBBZXW010000041 DBBZXW010000000
VERSION     DBBZXW010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.041"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(249..2720)
                     /locus_tag="ACJJD2_001135"
     CDS             complement(249..2720)
                     /locus_tag="ACJJD2_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG7579684.1"
                     /translation="MKKTCFHCGLDVPENLHLTVRYEGEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIACRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRVSSGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LVVLGNAMRLHKQVDMPSEKMPSEQ"
     gene            complement(2717..3895)
                     /gene="hflX"
                     /locus_tag="ACJJD2_001136"
     CDS             complement(2717..3895)
                     /gene="hflX"
                     /locus_tag="ACJJD2_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HGG7579685.1"
                     /translation="MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(3900..5180)
                     /locus_tag="ACJJD2_001137"
     CDS             complement(3900..5180)
                     /locus_tag="ACJJD2_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HGG7579686.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            5182..5310
                     /locus_tag="ACJJD2_001138"
     CDS             5182..5310
                     /locus_tag="ACJJD2_001138"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579687.1"
                     /translation="MPSSRRGNGVFYQNGKLANAVSDCRLPNRQTFPRADAEPDAV"
     gene            complement(5333..6058)
                     /locus_tag="ACJJD2_001139"
     CDS             complement(5333..6058)
                     /locus_tag="ACJJD2_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HGG7579688.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(6131..6808)
                     /gene="radC"
                     /locus_tag="ACJJD2_001140"
     CDS             complement(6131..6808)
                     /gene="radC"
                     /locus_tag="ACJJD2_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HGG7579689.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQSVCSF
                     RQLGLMP"
     gene            6835..6957
                     /locus_tag="ACJJD2_001141"
     CDS             6835..6957
                     /locus_tag="ACJJD2_001141"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579690.1"
                     /translation="MPSETDVPTRQISEMPSEPDFRFRRHLYFKTVLRRFFQLD"
     gene            complement(6931..8280)
                     /gene="gshA"
                     /locus_tag="ACJJD2_001142"
     CDS             complement(6931..8280)
                     /gene="gshA"
                     /locus_tag="ACJJD2_001142"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HGG7579691.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWNAHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNVYALGEILCSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIGIDEWQINPYFEKIGGLDFQEREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            8540..9949
                     /gene="leuC"
                     /locus_tag="ACJJD2_001143"
     CDS             8540..9949
                     /gene="leuC"
                     /locus_tag="ACJJD2_001143"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HGG7579692.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMESR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            10046..10300
                     /locus_tag="ACJJD2_001144"
     CDS             10046..10300
                     /locus_tag="ACJJD2_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579693.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            10362..11003
                     /gene="leuD"
                     /locus_tag="ACJJD2_001145"
     CDS             10362..11003
                     /gene="leuD"
                     /locus_tag="ACJJD2_001145"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HGG7579694.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAGQTLT
                     TPGGETLAFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            11172..12443
                     /locus_tag="ACJJD2_001146"
     CDS             11172..12443
                     /locus_tag="ACJJD2_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7579695.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGTVTEEEKQLLNMLLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDKYDLLGNTVAVPVIKAVSERLLHTL"
     gene            12459..13190
                     /locus_tag="ACJJD2_001147"
     CDS             12459..13190
                     /locus_tag="ACJJD2_001147"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HGG7579696.1"
                     /translation="MVKLTAQQIFDKLLNEEKILSVNGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNASPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            13224..14294
                     /gene="leuB"
                     /locus_tag="ACJJD2_001148"
     CDS             13224..14294
                     /gene="leuB"
                     /locus_tag="ACJJD2_001148"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HGG7579697.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKEYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            14457..15020
                     /locus_tag="ACJJD2_001149"
     CDS             14457..15020
                     /locus_tag="ACJJD2_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HGG7579698.1"
                     /translation="MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPIANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMEKTEVCGGDFSTTIDRT
                     KWGMDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         3657 a         4104 c         3887 g         3543 t
ORIGIN      
        1 ctatacgaat aaaaaaatat cctacctagc ccgaaccttc ttataatttg tactatgtga
       61 ttatccattt caatatccat ttaagctttc aattaatttt ctatattttt caatggcatg
      121 tatcatgcta tgcttgggaa atatcatctt ggttgatgat caagccatgt atgcaaagat
      181 tggaatatgg tatttgtcgt gctaataatg cccccgttac tgttatacgt ctaaagcaac
      241 gctgtccgtc attgttcgga cggcattttt tcagacggca tgtccacctg cttgtgaagc
      301 cgcatagcat tgcccaatac gaccagcgaa ctgaagctca tacccagtgc ggcaatccac
      361 ggttggacat agcccaaaac ggcaagcggt acggcaatga tattgtacgc gcccgcccat
      421 atcaggtttt gccggataat atggcgggtg cgccgcgcct gatcgagcag gtgggcgacg
      481 gtacgcaaat cttcgttcaa taacacaatg tccgcgccgt ccctcgcaat atccgtcccg
      541 cccgctgcgg cggcggatac gtctgcctgc gccaaaacgg gcgcgtcgtt gatgccgtcg
      601 cctatcatca gcactttttt cccttctttt tgcaaggctt tgacgtattc cagtttgtcc
      661 tcgggcatgg cttgggcgcg gtagtgcgcg acacccaggg cgcgtgcggt ttcggcaacg
      721 gcggtttcgc ggtcgccgct gaggatgtgc agggtcaggt ttttgcctgc caactgccgc
      781 accgcctccg ccgcgctgtc tttcaagggg tcggtcaggt agaacacggc ttggaaaccg
      841 ctttgactgc cgaggtaaac cgcgctgccg ccgccttctg tttgcggttc tttacctgaa
      901 atttcggcga cataggatgc cctgcccaat gcccaaacct gtgtttcgcc gttgacggtc
      961 agttgcgcgc ccacgccttc gccgatgcgg ttgaggcgtt gtttaatagc gatgtcgggg
     1021 acgctgccgc ttgaaacacg gcagttgagg atggcgcggg caaggggatg ttcggactgt
     1081 tgttctaaag cctgcgccac cgcgagaaca aaggcttcgt ctgtgcctct caacaatgag
     1141 atacggcgga cggcgggttt gccttgggtc agcgtgccgg ttttgtcgaa gatgatgtcg
     1201 gtggtttggg cgagggtttc gattgcctgc tttccgccga ttaaaatgcc ttcgcgcgcc
     1261 agcgtaccgg tagaagctgc cagcgcggtc ggcgtggcaa gcgataaggc gcaggggcag
     1321 gtaatgacca gcagggcgac ggtaatccac aatgcggtgt gcgcgtcggc gtacagcgtc
     1381 cagccgatga agacggggac ggcaagcagg agttcgccga atatgaaaga cgaggcgtat
     1441 tgttccgcca actcggcagt gcgcggtttt tgcgctaagg cgcggtcgag caggcggacg
     1501 atgtgcgaca gtcgcgtgcc gccgccggtg cggtcggtgc gtataatcag ggggctttgc
     1561 gtgttgagtg tgccggcggt tactttttca gacggcattt tggcgacggg caggctctcg
     1621 ccggtcagca tagattcgtt gacggcactg cttccttcca gcaccgtgcc gtcaacgggg
     1681 atggtttcgc ccggtttgac cagcacgata tcgcccgctt tcaatttgac gacagctgcc
     1741 tcgcaggttt cctgcgtatc ggggtaatcg ggcatatgat ggcaaaacgc aggaatcagc
     1801 ttcaccagcc tctcggcggc atcgcctgcc ttacggcagg caatgtgttc cataaagcgt
     1861 ccgcccagca ggaaaaacag cagcatcgcg atggattcga aatacatccc ctgccccgca
     1921 tttgtcgcaa ggctgtaaac gccggcgata aaggtcataa tgatggcgac ggtaatcggc
     1981 gtgtccatac cgacccgacg gtttttcagg tcgcgcaacg cgccttgata aaacgggacg
     2041 gcgcaataaa atacgacggg cagcaccatt aaaaagccgc cccaatggag gatttgcagg
     2101 aaatcgggtt cgatatcgcc gccgtaaagg taggtcggca gcgcgaacat catcgtctgc
     2161 atcatcccca gcccggcaac ggcgaggcgg acgatgtatt gtttgcgttc tttttggttg
     2221 gcggcttcga ttttttgcgc gtcatagggt gcggcggtgt agcctatctg ccggattttc
     2281 aacagaatat cggaaaggcg gattttgccg tcgtcccaga cgacgcggca gcggtgcgtg
     2341 ctgtaattga ggtcgatgcg gacgatgccg tctgtacgca aaagctgctg ttcgatcagc
     2401 cagacgcagg cggcgcaggt gatgccgccg agcattaaaa ccgcctcgcg cgtgccgccg
     2461 tgggtttcca caaagtcgga ctggacttcg ggcaggtcgt acaggcggat ttggtcgagg
     2521 atttcttggg gcggcagctc ggttttttgc gcgtcggcgg tgcgttgttt gtaataactg
     2581 cccaagcccg cgtcaataat gctttgtgcg accgcctgac agccggcgca gcaggtttct
     2641 cggtcttcgc cttcgtagcg gacggtcaga tgcaggtttt cgggaacatc cagcccgcag
     2701 tggaaacagg tttttttcat ggcatttcgg tttcgtctgt gtttggtgcg gcggcacaag
     2761 actcggcaat ggcttcgcgc agtgcgtcta taccggtatt ttcagcaacg gaaatgcgga
     2821 cggcggcaat ttttcccgca gcgtcgcgcc atatgcccgt gttttgttct tcagacggca
     2881 gcaggtcggt tttgttgtac accttgatgc acggaatatc gccggcatgg atttcttgca
     2941 gtacgttttc cacgtcttca atctgctgtc cgctgttcgg ggcggcggca tcgacgacgt
     3001 gcagcagcac atcggcttgc gcggtttctt ccagcgtggc ggaaaatgcc gaaatcagtt
     3061 tgtgcggcaa atcactgacg aatccgacgg tatcggtcag gataatgctg cattcgggac
     3121 tgatgtacag ccgccgcgcc gtggtgtcga gtgtggcgaa aagctggtct ttcgcatata
     3181 tgcccgactt ggtcagccgg ttgaacaggc tggatttgcc gacattggta tagccgacca
     3241 gcgcaaacgt tttgattgtg cccgattcgc ggggcttgcg gcgcagggcg cgctgttttt
     3301 tgaggttgac aagctgtttt ttcaaggcat tgatccgatg ggcgatcaat cggcggtcgg
     3361 tttccagttt ggtttcgccg gggcctttca tgccgatacc gccgcgctgg ctctgcagat
     3421 ggccgtaacc gcgtatcaag cgtcccgcca aatggctcaa ttgcgccaac tcgacttgca
     3481 gcctgccttc ctgcgtgcgg gcgcggcggg cgaaaatcgc cagaatcagc cctaccctgt
     3541 ccaatacgcg gcatttcagt tctttttcaa ggttgcgttc ctgcgtgggc gtgagttcgt
     3601 ggttgaatac gaccaaatcg atgccgtctg cggcaactgc ttctgacagc tccgccgcct
     3661 tgcccgtgcc gacaaacagc gcggtgtgcg gacggtcgcg tttggcagtc tccacgcgca
     3721 cggaatcgcc gcccgccgct ttgaccagct cgacagcttc cgccaatgcc gtctgaaaac
     3781 cgttcagacg ggtggcactg ctgcccgtgc catctttgtc caacattacg cccaccagca
     3841 tgacgcgttc gggttgcgct tgggtactgc cgttgcggcc tgttctgcct gtcatgtatt
     3901 caatcctgta aataaagggt tacgcctcgt tccgtttctc cttccggtgc aagcgtgatg
     3961 cggctgcccg ccattccgtc aacgctgaag acgatgccgc ccgcctcgtg ccttcctatg
     4021 gacaggcggc tgccgggtcg ctgccggtag gtataacggg tacacgcttc caaacaccag
     4081 cgtccgcgcc agtggatgaa atatttttcg ccttttctaa ccgcaagtgt ctcgccgccg
     4141 tttacctcaa aataagggta atcgggtttt cgggttctaa actgccattt cgcctgcgcg
     4201 cgccgtccgt tgcggacata gtcgaatacc gccgtataaa gcgtaccgta ttccaaaggt
     4261 ttgagcggaa aaagcgcgaa ttggtacgcg gtcagcctgc cgttggggtc gttgccggcg
     4321 gttaaaaccc tgacggggcg gatttcgttt ttaccctgat acagcttgaa acttttcatc
     4381 gtaattttgc ctgccgcctc ggaaaaatca atgctggcag gattgcccgt gatttcatat
     4441 tccggcacgg ggtctggacg ctcgccgtgg aaataaggca gtgcgccgct gccgacggga
     4501 taggctgtat agagcagctc ctgtgcgggc atggcttcgt cggtgtacac gaccgcaccg
     4561 ttatggcagg cgttgcggta atatttccgt cctgcttccg gctgatttct gccttgggcg
     4621 caatgccgct caaacctgcc gttgccctga ttgaatacga gaacggtttt accgttttcg
     4681 cgcacaaatg ccgctcctgc ctcatccgta tggcggtcaa gtagggaaag gcggtggtag
     4741 attgcgctca ttaatccgtc cacttggcgt tgctgcgtgc ggatgtcgct gtcggacgat
     4801 tcggcggctt cctcttccgt gctgatgttt tcatgcacgc cgttgtagag atacccggca
     4861 aggcgtgtgc gttcggtcag cttttgtgcg gtgtagtgcg gattgtcggg atggtgttcg
     4921 ccgtgtccgt cttcgggatt gagcgtgaga tagcgtgcgt gcctgcgggc ggaattttcc
     4981 aaaaccggcg cgtgtgccag cttgtgcaaa ccgatttggg cgcggatgcg gttgaggtag
     5041 tgcagcgcat cgccgccgtc cctgatttgc ggtgcggacg gatagacaag ttcgcccgcg
     5101 ggcagggatt ggttttgggt atgatagaaa acgcctgccg ccgaacccaa caggagcagc
     5161 cgaataaaaa gggatttcat aatgccgtcc tcccgacgcg gcaacggggt gttttatcaa
     5221 aacggcaaac ttgccaatgc ggtttccgat tgcagattgc caaaccggca aacctttccc
     5281 cgtgccgatg ccgaacccga tgccgtctga accttcagac ggcatcgggt gtttatttgt
     5341 ccacccggat gggggcaggt tcgtattgtg tcgattcgtc gccgtaatac agcacgccga
     5401 gtttgatggg gattctgccc tgtgatttgc ggtgggcatt ggaatccctc agggaatagg
     5461 cacaaccgca atattcctgc tggtagaagt tttcacgttt gctgatttca atcatgcgcg
     5521 cgctgccgcc gcctttgcgc cagttgaaat cccaatacac cacatcatcg taaggcgcgg
     5581 cggcgcggtg tccgcagtcg ttgatttgcg ccatattttt ccagcgtgaa atgcccagcg
     5641 aactggtaaa gacggggaac ccgtgttcat gcgcgtattg cgccgccttt tcaaaacgca
     5701 tatcgaaaca catggtgcag cggatgccgc gttccggctc aaactccatg cctttggctt
     5761 tggcaaacca ttctttgcgg tcgttttcgt agtcgtcgtc tttatcgatg aaaggaatgc
     5821 cgaacttttc cgcaaagcgc acgttttcct cttttcggag catatactct ttgtgcggat
     5881 ggatattggg attgtaaaaa taaatggtgt agtcgatgcc gctggccagc atggcttcca
     5941 tcacttcgcc gctgcacggg gcgcagcagg aatgcagcaa gactttttta tgtccaccgg
     6001 gcgggacgag tatagggcgg tcaatgtcgg taacggtagg tttgttttgt gtttccatta
     6061 acttaacaat atctgttgaa tacggttgaa gcggctattt tatcagagcc gccgcatgta
     6121 aaacagagtg tcagggcatc aacccgagct gtctgaacga acagacgctt tgcgaggtaa
     6181 cgataaaatg gtcgagcagc gacacatcga ccagcgacat tgcctgtgcc agccgccttg
     6241 tgaacatgat gtcttcctgc gaaggttcgg gcgagccgcc cggatggttg tgcgcaataa
     6301 tcaggctgtc ggcatattcg tccaatgcca gtttgacgat ttcgcggatg taaatcgtgt
     6361 tttccgcaac cgtaccgcgc gacagctctc tgaccgcaat cagttggttt tggcggttca
     6421 gcagcagcgc gacgctgact tcgacttttt cctgccccaa atgaaagcgt aaataatcgg
     6481 ccaccgtatc cggatcggac aggacgatgc tctcctgcaa ttcttccgcc aatatccgcc
     6541 gcccgatttc cctgaccacg gcaaactgtg tgaaacttgc cgtccccatc cctttgtatg
     6601 ccgacagttt gccgacctcc gcgctcatca gcctccccaa actgccgaac tcctgcagca
     6661 aataacgcgc caaatcgacc gcactcattc cgcgcgtgcc gacgcgcagc aggattgcca
     6721 aaagttcggc atcactcaac gccgccgccc cgcgttccaa cagcttttcc ctgggtcttt
     6781 cgccttccgg ccattgcttg atgctcatgt tttccctttt ttaaatagtc tgagatgccg
     6841 tctgaaacag atgttcccac acgccaaata tccgaaatgc cgtctgaacc ggatttccgc
     6901 ttcagacggc atctgtattt caaaacagtc ttacgccgtt tcttccaact cgattgaagc
     6961 cgccagaagc gacaggcgtg ccattacgcc gtaaacgtag aggcggttgt gttcgttgtc
     7021 cacgtcgcag tctttttcag agcgcggcat acccagcgag tcccattgtt cgaatacgcg
     7081 cttgcaggct tcgggcgctt cttgggaatt atcgccgtta ccggtaggaa tgctgttaga
     7141 cagcggaaca aacaccatac cgccggcgtt gaggttttcg tccgcaccgc gcccttcgtg
     7201 tacgcggaaa aagccgccga tgacgaagcg gtccatcata tacacgacgg gttcgcacac
     7261 cgcgccgttt aaggtttcat aagtataaat cccttcttgg acaatcactt cgctgacttc
     7321 caagccttct ttgactttcg ccattttatt gcggttttta cggttcaatc cgcgcacttc
     7381 gtcggcggat ttgacgctca tcacgcccat gccgtaagtg ccggcatcgg ctttgacgat
     7441 gacgaaaggt ttgtcggtaa tgcccgattc gtcgtatttg gcttgaattt tcgccagcac
     7501 acgttctacc gcttctgcca acgcatcttc accttcccgc tcttggaagt ccaaaccgcc
     7561 gattttttca aaataagggt taatctgcca ttcgtcgatg ccgattaact tggcaaattc
     7621 ggcggcaact tggttgtacg cgccgaaatg atttgttttg cggcgcgtcg tccaaccgcc
     7681 gtgcaacggc ggcaaaacgg tttggctgat gcctttgagg atgtcgggaa tgccggcgga
     7741 caaatcgttg ttcaacaaaa ccacgcaagg cgagaaaccg tctgcaagat gtacgcggtc
     7801 gcgggtacgc aataaaggtt ccaacaggat tttgtcgccc aatgcggttt caaattcggt
     7861 cggttcggtt acttccggat tcaggctgcc caagcgcact tcataccctg ccgaacacaa
     7921 aatctcgccg agggcgtaaa cgttttgcag gtaaaacgta ttgcgcgtgt ggttttcggg
     7981 aataatcaat acggatttcg ccgtttcaca ggcgcgttgc accgcatctt gcgcggcaac
     8041 cgccgccagc gggataaagt tgggattcag attattgaag ccgccgggga acaaattcat
     8101 atcgatagac gaaattttgt aaccggcatt gcgtatatcg accgaaccgt aaaacggcgg
     8161 gcggtgcgcg ttccactgcg tgcggaacca cgcctcgatt ttggcgtgat tggacaggat
     8221 ttttgcctca aacgcctgaa gttgcgccga atgttcgggc gacatcaccg gtaatttcat
     8281 ctttcgtctg cctctgtgtg ttttttgaca agatgcagat gataatgcct ttgaaagaat
     8341 gacgacaagt attctttcgt atcgaatcat gctttagata taactgttta ctgaaatgga
     8401 caatatgtct aattttttcg ttaaaattgt ttgcaaaata acaccggctc aaaaattaga
     8461 caaaatttgt tgcgcggtat aaagaatacg tctaaaatcc gcccaatccg cattaccatt
     8521 tatccaaaag aacaacatca tgacagcaca aaccctctac gacaaacttt ggaacagcca
     8581 cgtcgtccgc gaagaagaag acggcaccgt cctgctctac atcgaccgcc atttggtgca
     8641 cgaagttacc agccctcagg catttgaagg cttgaaaatg gcggggcgca agctgtggcg
     8701 catcgacagc gtcgtctcca ccgccgacca caacaccccg accggcgatt gggacaaagg
     8761 catccaagac cctatttcca agctgcaagt cgatactttg gacaaaaaca ttaaagagtt
     8821 tggcgcactc gcctattttc cgtttatgga caaaggtcag ggcatcgtac acgttatggg
     8881 ccccgaacaa ggcgcgaccc tgcccggtat gaccgtcgtc tgcggcgact cgcacacttc
     8941 cacccacggc gcattcggcg cactggcgca cggcatcggc acttccgaag tcgagcacac
     9001 gatggcgacc cagtgcatta ccgcgaaaaa atccaaatcc atgctgattg ccgttgacgg
     9061 caaattaaaa gcgggcgtta ccgccaaaga cgtggcgctc tacatcatcg ggcaaatcgg
     9121 cacggcaggc ggtacaggct acgccatcga gtttggcggc gaagccatcc gcagcctttc
     9181 tatggaaagc cgcatgactt tatgcaatat ggcgattgag gcaggcgcgc gctcaggcat
     9241 ggttgccgtc gaccaaacca ccatcgacta cgtaaaagat aaacccttcg cacccgaagg
     9301 cgaagcgtgg gacaaagccg tcgagtactg gcgtacgctg gtgtctgacg aaggtgcggt
     9361 attcgacaaa gaataccgtt tcaacgccga agacatcgaa ccgcaagtca cttggggtac
     9421 ctcgcctgaa atggttttag acatcagcag caaagtgccg aatcctgccg aagaaaccga
     9481 tccggtcaaa cgcagcggta tggaacgcgc ccttgaatac atgggcttgg aagccggtac
     9541 gccattaaac gaaatccccg tcgacatcgt attcatcggc tcttgcacca acagccgcat
     9601 cgaagacttg cgcgaagccg ccgccatcgc caaagaccgc aaaaaagccg ccaacgtaca
     9661 gcgcgtgtta atcgtccccg gctccggttt ggttaaagaa caagccgaaa aagaaggctt
     9721 ggacaaaatt ttcatcgaag ccggttttga atggcgcgaa ccgggctgtt cgatgtgtct
     9781 cgccatgaac gccgaccgcc tgaccccggg gcaacgctgc gcctccacct ccaaccgtaa
     9841 ctttgaaggc cgtcaaggca acggcggacg tacccacctc gtcagccccg ctatggcagc
     9901 agcagccgcc gttaccggcc gctttaccga catccgcatg atggcgtaag tattttcagg
     9961 cggtctttaa gaatttgacg cggccgtctg aaatatgtcc cgtaaggcag aaacaccttt
    10021 aatattcaaa ccaaggagtt taaccatgaa caaacttttc attaccgccc tgtccgccct
    10081 cgccttgtcc gcctgcgccg gcacttggga gggcgcgaaa caagacaccg cccgcaacct
    10141 tgacaaaaca caggccgccg ccgaacgcgc cgccgaacaa acaggcaacg ccgtcgaaaa
    10201 aggctgggac aaaaccaaag aagccgtcaa aaaaggcggc aatgccgtcg gacgcggcat
    10261 ttcccatctc ggcggaaaaa tcgaaaacgc caccgaataa ccgattcgcg atgccgtctg
    10321 aaaccgcttc agacggcatc gtcagcacaa gacgcaaacc catgaaagcc tttaccaaaa
    10381 ttaccgccat cgtcgccccg ctcgaccgca gcaacgtcga taccgacgcc atcatcccca
    10441 aacaattttt aaaatccatc aaacgcagcg gcttcggccc caatgccttt gacgaatggc
    10501 gttacctcga ccacggcgaa ccaggcatgg acaacagcaa acgcccgttg aaccctgatt
    10561 tctcgctgaa ccagccgcgt taccaaggcg cgcaaatcct gttgacgcgt aaaaacttcg
    10621 gttgcggctc ttcacgcgaa cacgcccctt gggcattgga cgactacggc ttccgcgccg
    10681 tcatcgcccc cagcttcgcc gacatcttct ttaacaactg ctacaaaaac ggccttttgc
    10741 ctatcgtgtt gaccgaagaa caggttgacc ggcttttcaa agaagttgaa gccaacgaag
    10801 gctaccggct ctccatcgac cttgccgggc aaaccctgac cacccccggc ggcgaaacat
    10861 tagcattcga cattaccgaa caccgcaaac actgcctctt aaacggcttg gacgaaatcg
    10921 gactgaccct gcaacacgcc gatgaaattc acgcctttga agaaaaacgc cgccaaagcc
    10981 agccttggct gtttaacggt taaacctatg ccgtctgaag accgttcaga cggcattcct
    11041 gataacatat aattgctgca actaatgtaa acagaggggc tataaattgc tttcatcttt
    11101 caagcgggct tagcaacgct ctaaattaat gcaatacagc tctatttcaa ataaattttt
    11161 agatttttaa tatgcaacag attaaattta ttgacttatt ttccgggatg agcggtatca
    11221 ggaaaggatt tgaacaagcc tgtcggaaac agtcggttgc ttgcgaatgt gtttttacct
    11281 cagaaatcaa accggcagct ttggaagtat tgaagcaaaa ctaccctgat gaagtgccgt
    11341 atggagatat aacgaaaatt gaaacgggag atattcccga ttttgacatc ttgttggcag
    11401 gcttcccttg ccaggctttt tctttcgccg gaaaaagatt gggctttgaa gatacgcggg
    11461 gaacgctttt ctttgatgtg gcaaggattt taaaggcaaa aaaaccaaaa ggttttattt
    11521 tggaaaatgt ggaaggattg gtgacgcacg atagaaaaga tccgacacaa aaaataggac
    11581 gcaccctgac cgttattttg gaaaccttgg aaacattggg ctactatgtt tcttggaaag
    11641 ttttaaatgc aaaagatttc ggcattcccc aaaacaggaa gcgcatttat ctgacaggca
    11701 gtttgaaatc caaacccgac ttatcttttg aaacaaccct aagtccgaaa ttaaaaaata
    11761 ttttggaatc gggactgcct accgaaagca gtcctttcat caaaaaattg ctaaagaaat
    11821 ttcccccgtc cgaactgtac ggaaaatcag taaaggacaa acggggaggg aaaaacaata
    11881 tccacagttg ggatattgaa ttaaaaggca cagtaaccga agaagagaag caattattaa
    11941 atatgcttct aaaagaacgg aggaagaaaa aatgggcttc agaaatcggc atcgattgga
    12001 tggatgggat gcctttgaca aaagcgcaaa tttcaacttt ctataaacac cccaatcttc
    12061 aaaatatttt ggacagcctg acagataaag gctatttggt tttggagcat ccgaaacaaa
    12121 aaattggcgg gcgaagaatc aaagatgaat ccctgcccaa aggctacaat attgtttcag
    12181 gaaaaaaatc atttgaaatc aataaaatat tagacccaaa tgatgttgcg ccaaccttag
    12241 ttgcaatgga tatggagcac cttttcgtcg ttgacaacgg cggtttgcgc acacttaccg
    12301 gaaaagaagg tttacgctta ttcggctatc cggacgatta ttcgtttgat attcctaaaa
    12361 aagacaaata cgatttattg ggcaataccg ttgccgttcc tgtgattaag gcggtatctg
    12421 aaaggcttct gcatacttta taaaccgata gggataaaat ggtaaaactt actgcacaac
    12481 aaatatttga taagttgctg aatgaggaaa aaatcttatc ggtcaatggt caaattagat
    12541 ttttcttggg cgatgtggat attatcgtca aacaaaaaga tgtcgtcggc aacatcattc
    12601 aggaatggct cggcggatgg ttgagaaaaa gggaaattga atttgatgtt tcaaccaata
    12661 cccaaatgcc ccccgatttc tttttaaata aaaaagaccg cagtagagaa ttgttggaag
    12721 taaaggcgtt caaccgaaat gccagtccgg gttttgatat tgcagatttt aaaatgtatt
    12781 ctgatgaaat cattcataaa ccctatatgc tggatgtaga ttatttaata ttcggttacg
    12841 atatggacga caacggcaat gtaaccatca aggatttatg gcttaaaaaa gtatggcaaa
    12901 ttacgagaag catggatggg tgggcaatta atcttcaagt caaaaaaggc gtggtgcata
    12961 aaatccgccc gggtgtttgg tacagcataa ataaaaagaa tatgcctatg tttgaatgct
    13021 tggaagattt tgtttccgca attgaagaaa ccgtttatca aaacccggca acacggcata
    13081 acgcatcctt atggaaaaag aaatttgagg aagcctataa aaaacactac aaccgatcga
    13141 tttccatacc tcgttggcac gaaattgcac acaaatacaa aaagaaataa cccttcaacc
    13201 atcaacccat aaggaaactt gaaatgacca aacatatcgc catcctccga ggtgacggca
    13261 tcggtcccga aatcgtcgcc gaaaccgtcc gcgtactcga caaactcatc gcccaaggtt
    13321 tggatgccgg ctacgaatac gccccattgg gcggcgaagc ctatgacgaa tacggtcatc
    13381 cttatcccga atttacgcaa aacctctgcc gcaaagccga tgccgtcctg cttggtgcag
    13441 tcggttctcc tcaatacgac aacctcgacc gtccgttgcg ccctgagcgc ggcctgttgg
    13501 caatccgtaa ggatttgaac ctgtttgcca atttgcgtcc tgctgtttta tatcccgaat
    13561 tagccaacgc ctccacgctg aagcctgaaa tcgttgccgg tttggatatt ttgattgtgc
    13621 gcgaactcac cggcgacatc tatttcggcg aaccgcgcgg catccgcgtt ctggaaaacg
    13681 gcgaacgcga aggctacaac accatgaaat acagcgaaag cgaaatccgc cgtattgccc
    13741 atgttgcctt ccaatccgcc caaaaacgca gcaaaaaagt ctgttccgta ggcaaagcca
    13801 acgttttgga aaccaccgaa ttgtggcgcg aaatctttga agaaatcggc aaagagtacc
    13861 ctgatgtcga gctttcccat atgtacgtcg acaacgccgc catgcagctc gtgcgtgcgc
    13921 ccaaacaatt cgacgtcatt gccaccggca acatcttcgg cgacattctc tccgacgaag
    13981 cctccatgct gaccggctcc atcggtatgc tgccttccgc ctcgctggac gaaaacggca
    14041 aaggcctgta cgaaccgtct cacggctccg cccccgacat cgccggacaa aacaaagcca
    14101 acccgctggc caccatcctc tcgctcgcaa tgttgctgcg ttacagcctg aacgacgaag
    14161 cgcgcgcgca acaagttgaa aacgccgtcc aaaaagtgct gcaacaaggc ttgcgtacca
    14221 gcgacattta cgaagaaggc acaaaactcg tttcctgctc cgaaatgggc gatgcggtac
    14281 tcgccgcctt gtaaaaaaac aaagcgcgga tcacaccgcg ctttttcatc cgcccttttc
    14341 cgcccgcccc gttcgtcaac cgcctgcaaa cccaccgttt accggcagga aatgccataa
    14401 atccctgcct atgttaggat aaacgccttt accggcccac acaaaggatt atcatcatga
    14461 aaaaaatcat cttcgccgca ctcgcagccg ccgccatcag tactgcctcc gccgccacct
    14521 acaaagtgga cgaatatcac gccaacgccc gtttcgccat cgaccatttc aacaccagca
    14581 ccaacgtcgg cggtttttac ggtctgaccg gttccgtcga gttcgaccaa gcaaaacgcg
    14641 acggtaaaat cgacatcacc atccccattg ccaacctgca aagcggttcg caacacttta
    14701 ccgaccacct gaaatcagcc gacatcttcg atgccgccca atatccggac atccgctttg
    14761 tttccaccaa attcaacttc aacggcaaaa aactggtttc cgttgacggc aacctgacca
    14821 tgcacggcaa aaccgccccc gtcaaactca aagccgaaaa attcaactgc taccaaagcc
    14881 cgatggagaa aaccgaagtt tgtggcggcg acttcagcac caccatcgac cgcaccaaat
    14941 ggggcatgga ctacctcgtt aacgttggta tgaccaaaag cgtccgcatc gacatccaaa
    15001 tcgaggcagc caaacaataa atcttgatgc gaatcagcac aaatgccgtc tgaacgtcct
    15061 tcaaacggca tttgtgccgt cttcatcaaa ccgccccgcc aacggtaagc cgatatggcg
    15121 gagcacaatc cgccgaaaga tatttcagcg gcaggcaggg cttgccggaa agtccggaaa
    15181 gtatagtgga t
//
LOCUS       DBBZXW010000042        14822 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.042, whole genome shotgun sequence.
ACCESSION   DBBZXW010000042 DBBZXW010000000
VERSION     DBBZXW010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14822
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.042"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..3478)
                     /gene="smc"
                     /locus_tag="ACJJD2_001150"
     CDS             complement(<1..3478)
                     /gene="smc"
                     /locus_tag="ACJJD2_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HGG7579699.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNRQQDLLDYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQLQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATGHAAAPQLWQHITAPAEWQHALSVILAERLHARDVPQGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLSPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHASDGLSDDIATLQEAAAELEHQQQTAAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELVLAYETEFQNDEQHIKLDELT
                     ESVHTLDEEYIAVQEKLTQIQEQGREQYARVQTLQTQLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQTAITLLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAE"
     gene            3727..4449
                     /gene="lpxH"
                     /locus_tag="ACJJD2_001151"
     CDS             3727..4449
                     /gene="lpxH"
                     /locus_tag="ACJJD2_001151"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HGG7579700.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAIYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            4718..6304
                     /locus_tag="ACJJD2_001152"
     CDS             4718..6304
                     /locus_tag="ACJJD2_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HGG7579701.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6472..6675)
                     /locus_tag="ACJJD2_001153"
     CDS             complement(6472..6675)
                     /locus_tag="ACJJD2_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HGG7579702.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            6791..7288
                     /locus_tag="ACJJD2_001154"
     CDS             6791..7288
                     /locus_tag="ACJJD2_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HGG7579703.1"
                     /translation="MTALTLPEDILQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGETIETLADEGRDIPSLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIRSNWETFA
                     HIGQA"
     gene            7370..8563
                     /locus_tag="ACJJD2_001155"
     CDS             7370..8563
                     /locus_tag="ACJJD2_001155"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HGG7579704.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIATEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQNFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(8966..9901)
                     /gene="hemC"
                     /locus_tag="ACJJD2_001156"
     CDS             complement(8966..9901)
                     /gene="hemC"
                     /locus_tag="ACJJD2_001156"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HGG7579705.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10020..10535
                     /gene="ybeY"
                     /locus_tag="ACJJD2_001157"
     CDS             10020..10535
                     /gene="ybeY"
                     /locus_tag="ACJJD2_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HGG7579706.1"
                     /translation="MKRAKQYPFLSLQRQRFHLNFENASSTANLPSERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            10537..11361
                     /locus_tag="ACJJD2_001158"
     CDS             10537..11361
                     /locus_tag="ACJJD2_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HGG7579707.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(11504..12883)
                     /gene="nhaC"
                     /locus_tag="ACJJD2_001159"
     CDS             complement(11504..12883)
                     /gene="nhaC"
                     /locus_tag="ACJJD2_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HGG7579708.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFHADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAA
                     QDLNGVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDVAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDRLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13175..14398)
                     /locus_tag="ACJJD2_001160"
     CDS             complement(13175..14398)
                     /locus_tag="ACJJD2_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HGG7579709.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         3492 a         4161 c         3829 g         3340 t
ORIGIN      
        1 attccgccat ttccaacgcc tgtttgatgt ccacggcgac gacgcgcgat acgccttttt
       61 cctgcatggt tacaccgacc agctgttccg ccatttccat ggtcaggcgg ttgtgggaga
      121 tgtagagaaa ctgggtttgc gccgacattt ctttgaccag gttgcagaaa cgcgaagtgt
      181 tggcatcgtc tagcggagcg tcgacttcgt ccaaaagaca gaacggagcg gggttgaggc
      241 tgaacagggc gaacacgagg ctcatcgcgg taagggcttt ttcgccgccg gaaaggaggt
      301 ggatggtgct gtttttcttg ccgggcgggc gcgccatgat agacacgccg gcggtcaaaa
      361 ggtcgtcgcc tatcattttg agggtggctt cgccgccgcc gaacagggtc gggaagaagg
      421 tttggacttt gccgttgacg gcgtcgaagg tttctttgaa acgcgctttg gttttgtcgt
      481 cgatttgggc gatggcttct tccaaaaggg tgatggcggt ctgcacgtct tcgctttggc
      541 tgcggtagta gccgtcgcgt tcgcgcgctt cttcgagttc ttgcagggcg gcgaggttga
      601 ccgcgccgag ggcttcgatt tgttgcgaga ggctgccgat gctgctgttc aatactttcg
      661 gcgattcttt cgccaacgct tcgagcgcat ccaaatcggc ggcgcgttcg gtcaggtttt
      721 gatggtagcg tttggcgttg atcagggctt cctgttgttg caacagggcg gtttgggtgg
      781 cggcctgaag ctgtggcaac tgggtttgca gggtttgtac gcgggcgtat tgttccctac
      841 cctgctcctg aatctgcgtg agtttttcct gcacggcgat gtattcttcg tccagcgtgt
      901 gtacggattc ggtcagctcg tcgagcttga tgtgctgctc gtcgttttgg aactcggttt
      961 cataggcgag gacaagctct tgctggcgtt cctgccagtc tagggtttgc tgttcgagtc
     1021 gggcgatttg ctgctggtag ttttgttttt gctggttgag tttgtggacg gcgacttcgg
     1081 caagcccata ttggcggttg gcttccagca gggcaagctg cgcctgtttc agacggcctt
     1141 gctgctcttg gcggctgtgt gcggcggttt gctgctggtg ttcgagttcg gcggcggctt
     1201 cctgcaaagt agcaatgtcg tctgaaagcc cgtcggacgc gtgttgcaac acggtctgct
     1261 cttccgccaa ctgcgccagt tcgcgctcga tgtgttcgcg gcggatttgc ccttggttgg
     1321 tacgcgccag aagttcggcg gcgcgttgct gcgcttggct gtattggcgc gtgtgctgct
     1381 gttgctgctg catcaggttt ttatgctgca cttcggacga gcgcacggcg gcttccgcct
     1441 gtttgaacgc ggcttcggcg gcagaaagtt cgggggagag gttttccagt tcggacgcga
     1501 tgccgtcgag gcgcgctttt tgggcaatca ggctttcctg cgcgggtttg gcatagagca
     1561 ggacgctgac cttatcgacc tgatggcctt cgggcgtgag ccagatttga tgtgcgccca
     1621 aatcgttttg atgcgcgagg gcgtaactca aatcaggcgc acacaatacg ccgtcgagcc
     1681 agtggtgcaa tgccgtctga aacggcggct gcgcttggat ttggttcagc aatgcctgta
     1741 cgggcaggga ttttttgatg ccgccggaga gaccgtctga aagccacgcc gcctgcccct
     1801 gcggcaaagg ttcgggcggt acgaaacctt gcggcacgtc gcgggcgtgc aggcgttcgg
     1861 caaggatgac ggacagggcg tgctgccact cagcaggcgc ggtaatgtgt tgccacagtt
     1921 gcggcgcggc ggcgtggccg gttgcctgcc agaaatcggc tgcttcctgc tgttgcgaca
     1981 ggatttgcga caacgcctgc tgctgcgcct gcaaggtgat gtgttgctgc ttcaggcttt
     2041 ggaagcggtt tgaggccgtc tgaaacgcct cgcgggcggc gtgtaaggct tcttcggcgg
     2101 cgatgatttg ttcttcgtaa tgctcttgcc ggctttgcaa caaggcagcg gcctcctgcg
     2161 cggcggcggt ttccgcttcg tcgggcaggt tcagggcttg gttctcctgt ttcagacggc
     2221 ctttgcgctc ttcgtgcttg gcaacggttt gttcggcatg ggcaagctgc tgctgcttca
     2281 acgccagttc gcggcggatg cggtttgcct cgtcctgctg ggtttggaag gcggcattga
     2341 gcgcggtttg ggtttcttcc aattcgggca gacgctcttc gtgttcggca acctgcatcg
     2401 cccactccgc cagctcggtt tgcttttctt cgacgtataa ctcgttttct tcaagctgca
     2461 cgcggatttg ctgctgctct tgatgaatac gctgcaactg cgcctgcgcc gcctgcttgt
     2521 cgcgttcgat gcgttggtgc aggttttgct gatggcggat ttgttcttcc aaacgggcaa
     2581 tctgctcgcg caacacgccg cgtttgttgc tcaattcatg caccgcctgt tgctgcgact
     2641 gttcggcggt ctgcaaggcg tgtacttcgt cgtttaacgc ctgaacctgc gcggcggttt
     2701 cgtcctgctg cgcctgcaaa gactgatgct gctcggtcgc cttgtcggcg gcggcaagcg
     2761 attgctgcca ttgggcgtaa tcgagcaaat cctgttgccg gttcaactgc gcggtcaggg
     2821 atttgtagcg ttcggcggtt tccgcctgtt tctccagctt ttccacctga cgcgccaatt
     2881 cgttctgcaa atcgcccaaa cgctgcaaat gctcgcgcgt gtctttcaga cggccttccg
     2941 tctccttgcg gcgttcctta tatttggaca cacctgccgc ctcctcgata taggcgcgca
     3001 attcctccgg ccgcgcttcg atgatgcgcg aaatcatccc ctgctcgata acggcataac
     3061 cgcgcgcgcc cacgcccgta cccaaaaata aatcggtaat gtcgcggcgg cgcacggtct
     3121 gattattgat gaaataagtc gattcgccct gacgcgtcag ctgccgcttg atactcacct
     3181 cggcatactg cccccacgcc ccctgcaaac tgtggtcgct gttgtcaaac accagctcca
     3241 ccgaagccct cggcgcagga cggcgcgtcg ccgcaccgtt aaaaatcacg tcctgcatac
     3301 tctcgccacg aagctgcttc gccgaagcct cgcccaacac ccagcgcacc gcgtcaatca
     3361 cattcgactt gccgcagccg ttcggcccga taaccgcaac aagctgcccc ggaacatgaa
     3421 tcgtggtcgg gtcggtaaaa gatttgaagc cggagagttt gatgtgggtc aggcgcataa
     3481 tggtcggaaa aaataaaaaa gaagcgtatt ttaacggaaa tcccgccgca ccaccccata
     3541 tcttgccggc aaaaccttac cgcatcccgc acccgcgatg ccgtctgaag ccttcagacg
     3601 gcatttttaa cgcgcccgaa ccccggttcc gccaatgccc gatgcttggc gcggcatttg
     3661 ccgtattgcc ccgccgccgg gcgcgttata atccgccccg acatccgccc gattggaaac
     3721 ctgcctatga aacccgccta tttcatctcc gacctgcatt tgagcgaaaa gcaccccgaa
     3781 ctgaccgcgc tgctgctgcg ttttttacgt tcttccgccg ccgggcaggc gcgggcgatt
     3841 tatattttgg gcgatttgtt tgatttttgg gtgggcgatg acgaagtttc cgagttgaat
     3901 acttcggttg cgcgggaaat caggaaattg tccgacaaag gcgttgccgt gttcttcgtc
     3961 aggggcaacc gcgacttcct gatcggtcag gatttttgcc ggcaggcggg tatgacgctg
     4021 ctgccggatt actcggtttt ggacttgttc ggctgcaaaa ccctcatctg ccacggcgac
     4081 actctgtgta cggatgacag ggcataccaa cgtttccgca aaatcgtgca tcggaagcgg
     4141 ctgcaaaaac tgttcctgat gctgcccctg aagtggcgca cgcgccttgc cgccaaaatc
     4201 aggcgcgtca gcaaaatgga aaaacaggtc aagcccgccg atattatgga tgtcaatgcc
     4261 gcctttaccg cgcggcaggt tcgcgccttt aacgcggaaa ggctgataca cggacacacc
     4321 caccgcgagc atatccatca cgaaaacggc tttacccgca tcgttttggg cgactggcat
     4381 aacgactatg cttcaatcct ccgcgtggac ggggacggcg cggtattcgt gccgctggaa
     4441 aaatgctgaa aatgccgtct gaagcctttc gggcggcttt ttttacacgc ccctttccca
     4501 cactccctcc gccgcatcat caccatcctt aacccgcatt aatgggcgtt atcgataaaa
     4561 tgcttgaccg attacataag attacgtaaa gtgtgcaaac gcataacaat tggtcttacc
     4621 aatttatctt ttaaccaaaa tatcgggtgt acgggatttg aacgtctttc caaacctcga
     4681 cgcgccttat gatgcaaatg cctaaaaagg attcgttatg gcacttttcc tcagcatatt
     4741 ccccatcgtc ctgctgattt ggctgatggt gaaaaaaaac agtatgccct cctacgtcgc
     4801 gctgccgatt accgcagtgc tgatttacgc catcaaactt ttctacttcg gcgatgcggg
     4861 catgctgctc aacgccaccg ccgcttccgg cctcgtcaaa acgctcacgc cgattaccgt
     4921 gattttcggc gcgattatgt tcaaccgtat gatggaaacc acgggctgca ttgatgtcat
     4981 ccgcaaatgg ctggcgacca tcagccccaa ccccgtagcg caactgatga ttatcggctg
     5041 ggcttttgcc tttatgattg aaggcgcatc cggcttcggc acgcctgccg cgattgccgc
     5101 gccgattctg atgagcttgg gcttcaaccc gttgaaagtg gcgattttca ctttggtgat
     5161 gaactccgtc cccgtctctt tcggcgcggt cggtacgccg acctggttcg gtttcgcacc
     5221 gctgaacctg agtgccgaag acatcctcgc catcggcagg cagaccggcg taatgcactt
     5281 cttcgcaggt ttcgtcatcc ccgtcatcgg cttgggcttc atcgtacctt ggtctgaaat
     5341 ccgcaaaaac ttgggcttcg tcgccattgc cgtcttctcc tgcaccattc cttatgtcgc
     5401 attggcgatg gtcaacgaag aattcccgtc gctcgtcgcc ggcgcgatcg gcctgatggt
     5461 gtccgtattc gccgccaacc aaggctgggg cttgagcaag gaccacgcca aagacccgaa
     5521 tgccgaaaaa gtgccgttcg cccaagtcgc caaagcactc gcccctttgg gtatgctgat
     5581 cggcatgctg gtggttacgc gcatcaaaca gctcggtatc aaaggcattt tgaccagcaa
     5641 agaagaatgg ttcagcttcc aactgccgtt tgatttgtcc aaaatcaccg tcagcgactc
     5701 cctgacgatt accttcggca atattttcgg acaagatgtc agcgcgtctt accaaacgct
     5761 gtacgtcccg gcttggattc cgtttgtgct gaccgtttgg atttgcatcc tgctgtataa
     5821 aaccaaattc aaagatgcct ggacgattta tgccgtaacc ttcaatcaaa ccaaaaaacc
     5881 gctgcttgcc ctgatgggcg cgctgattat ggttcagctg atgctggtcg gcggcgacaa
     5941 ttcgatggtg aaaatcatcg gtaaggaatt tgccgcaatg gcgggcgaac actgggttta
     6001 tttctcgccg tatctgggcg cgatcggtgc gttcttctcc ggctccaaca ccgtgtccaa
     6061 cctgactttc ggcccgattc agcagcaaat cgccttggat accggcctgt ccgttaccct
     6121 gattctggcg ttgcagtccg tcggcggcgc gatgggcaat atggtgtgcc tcaacaacat
     6181 catcgccgta tgtaccgtat tggatgtgaa aaattccgaa ggtgcgatta tcaagaaaac
     6241 cgttatcccg atggcgattt acggcgtgat tgccgtcgtc gcggcaatga ttttcttcct
     6301 ctaggcgaaa cgccaccatc catagcggca gcacgcgggg aacggaaacc gccgttcccc
     6361 gtctgggcgg cgcgtcgggc agaatcccgc tgccggaaca gcccgccccg ccaaacaaat
     6421 gccgtctgaa accggaaaag gcttcagacg gcatttttcc gccgtttgca ttcaggcgta
     6481 atgatgatgc ggcatcttgc cgtcaaggcg gtagcgcgtg ccgcaatacg ggcaggcaac
     6541 gctgcccgat tctccttcgc acaaaggcaa aaacactctc ggatgcccgt tccactgctc
     6601 gttgtcgggt cccgagcaat acagcggcag attttccggc aacacggaaa tttcctgcag
     6661 attcagattg tccatttgat tttcctttgc gtggttggcg tgcgcccatt ttacgccatc
     6721 ggcaggctaa aggatatttt cggcgcaaag ccgcaatccg ctataatccc cacttttcag
     6781 acggcatacc atgactgcgc ttacccttcc ggaagacatc ctccaacaag aaccatccgt
     6841 tctgctctat accctcgttt ccgcctacct cgaacacacc gcccaaaccg gcgacgaatc
     6901 cctctcctgc ctgtccgacg accagcacac gctgaccgca ttctgctacc tcgacagcca
     6961 agtcgaagaa ggcggcttcg tgcaactcat cgcctccggt tacggcgaat atattttccg
     7021 caacccgctt gccgacagcc tgcgccgctg gaaaatcaaa gccgtgccga aagtcttgga
     7081 caaagccaaa gccctctacg aacaacacgg cgaaaccatc gaaacgcttg ccgacgaagg
     7141 gcgggacatc ccttccctgc gcaaacagtt ccccgacttt gaagaatggg acggcgcata
     7201 ctacgaagcc gccgaacaag acctgcccct gcttgcagaa cacatacggt caaactggga
     7261 aaccttcgcc catatcgggc aggcgtgatt gcgtctgttt ccagcccgtg taaaacagcg
     7321 taaaatcggc aaacccgaat gaccttccgt ccccatcaag gagcaagcta tgttcttcaa
     7381 gcacatcgaa gccgcccccg ccgatccgat tctcggtttg ggcgaagcat tcaaagccga
     7441 aacccgcccc gaaaaagtca acctcggcat cggcgtttat aaagacgcat ccggcgcgac
     7501 acccctcgtc aaagccgtca aagaagccga aaaacgcctg ttggaaagcg aaaccaccaa
     7561 aaactacctc accatcgacg gtgttgccga ctacaacgag caaacccaaa tcctgctgtt
     7621 tggcaaagac cacgaaatca tcgccagccg ccgcgccaaa acagcgcaaa gccttggcgg
     7681 tacaggcgca ttgcgtattg cgaccgagtt tgccaaacgt cagttgaacg cgcaaaccat
     7741 ctggatttcc aatccgactt ggccaaacca caacgccatc gccaaagcgg tcggtatcca
     7801 agacaaacct tatcgttact atgatgccgc caaacacggt ttggattggg acggtatgat
     7861 tgaagacttg agccaagcgc aaaaaggcga catcgtcctg ctgcacggct gctgccacaa
     7921 ccctaccggc atcgacccta cgcccgaaca atgggaaact ctggcaaaac tttctgccga
     7981 aaaaggctgg ctgccgctgt ttgactttgc ctaccaaggc ttcggcaacg gtttggaaga
     8041 agatgcctac ggcttgcgcg tgttcttgaa acacaataca gaattgctga ttgccagctc
     8101 ttattccaaa aacttcggta tgtacaacga gcgcgtcggc gcgttcactt tggtggccga
     8161 agatgaagaa acagcagccc gcgcccacag ccaagtcaaa accatcatcc gtaccttgta
     8221 ttccaacccg gcttcacacg gtgcgaacac cattgcgctg gtgttgaaaa atgatgattt
     8281 gaaagcacaa tggattgccg aactcgatga aatgcgcggc cgcatcaaag ccatgcgcca
     8341 aaaatttgtc gagttgctca aagccaaagg tgcaagccaa aactttgatt tcattatcga
     8401 acaaaacggt atgttctctt tcagcggatt gactcccgaa caagtcgacc gtttgaaaaa
     8461 cgagtttgcc atttatgccg tccgctccgg ccgcatcaac gttgccggca ttaccgacga
     8521 caacatcgat tatctgtgcg aaagcatcgt gaaagtcttg taaaacaaaa gcgcatacga
     8581 aatgccgtct gaaccttaac cagttcagac ggcatctgtt ttttgttaaa aaacaataaa
     8641 ccataacaat ttcaaacaag ctaaaaacat ctataaaatc aacccaatat gatgaactca
     8701 aataaaaaat acgaatatca tcattctcaa attcaaaatt tgaacgccac agtattatcc
     8761 gaagccacaa aaacctttcc gccgtcattc ccgcgcaggc gggaatccgg gaacccaatg
     8821 ctgcaagaat tgattagaaa caactgaaac cgagcaaact ggattcccgc ctgtgcggga
     8881 atgacgaaat aaggcgagta aaactgatga aacaaattga ttaaaaacaa taacttatat
     8941 tattttattt aaattttcga taaaatcaat tttccgtatt caatactgct ccaatcaatt
     9001 cccgcgcacc gtcgtccgcc aatttcttag cgacagcgcg tccgagcgcg tcggcatatt
     9061 cggcaggggc ttgcgcgtcc gcctgcaaaa tgaccgaacc gtcggggtgt ccgaccagtc
     9121 cgcgcaaggt cagcaagccg ttttcttccg tgcaatatgc ggccaaaggc acttggcagc
     9181 ttccgcccaa agcgcgcgcc aaagcgcgtt cggccgtaac gcaggcgtgt gtggtatcgt
     9241 ggtttagcgg ttttaaaacc tcatacaaat cttcgcggtg cgcggcaatt tcgataccca
     9301 atgcgccttg tccggcggca ggcaggctgt cggattccga caaaatcatg cggatgcgtc
     9361 cgtccaattc cagacgctgc aaaccggcgg cagccaagat aattgcgtcg tattcgccgt
     9421 tatcgagttt agacaaacgg gtttgcacat tgccgcgcaa aggtttgata agcaaatgcg
     9481 gatagcgcgc acgcaactgg gcttcgcggc gcaggctgga tgtgcctacg acggcgcctt
     9541 tgggcatttc ttccaaacgc gcgtattggt tggacacaaa cgcgtcaaac ggattggcgc
     9601 gttcgccgat ggctgcaagc gcgaaacctt caggcaaatc catcggcaca tctttaatcg
     9661 aatgcacggc caagtcagcg cgcccgtcat ataaagcctg ttccaactct ttgacaaaca
     9721 agcccttacc gccgactttt gacaaagttt tgtccaaaat ctggtcgccg cgcgtggtca
     9781 tgcccaaaat ctcgacttcg caatcgggat acagggcttt cagacggcct tggatatgct
     9841 ttgcctgcca catggcaagc aggctttcgc gactggcgat aacgagtttt ttcgggttca
     9901 taatggttgc ctgaaagatg gaaaacggca tgaagtctat catattttgg gcggtctttc
     9961 agacggcatg agggtgaata tgttatattt acgcctaaaa accaaatttt ccggacaaca
    10021 tgaaacgcgc caaacaatat ccttttttat ccttacagcg acaacgtttt catctgaact
    10081 ttgaaaacgc ttcttccacc gccaaccttc cgagcgaacg cgatttctac cgctgggcgt
    10141 ggtctgcctt gaaaaatgaa taccgccgcg ccgacatcag cctgattctt ctggacgaag
    10201 aagaagcccg cgcttacaac cgcgactacc gcggcaaaga ttacgccacc aatgtattga
    10261 gtttcgcgct caacgaaggc gaaatcctgc cctgccaagt ttcggaaaaa ctgtacggcg
    10321 atttgattat ctgcccgcaa gtggttttga aagaagccgc cgaacagggc aaaacgcccg
    10381 aacggcattt tgcccacctg accatacacg gcgttttgca cctgatgggc tacgaccaca
    10441 tcgaagacga tgaagccgaa ataatggaag ccgaagaaat ccgcctgatg ctggcggcag
    10501 gcttccccaa cccctaccaa gaggacgaat attaaaatgg acggtacgca gtcgaaaccc
    10561 aagtttttcg aacgcctgat ctcccgactt gccggcgagc ccgactccgc cgaagacgta
    10621 ttgaccctgc tgcgccaagc gcacgagcag gaagtttttg atgcggatac gcttttaagg
    10681 ttggaaaaag tcctcgattt ttccgatttg gaagtgcgcg atgccatgat tacgcgcagc
    10741 cgtatgaacg ttttaaaaga aaacgacagc atcgagcgca tcaccgccta cgtcatcgat
    10801 accgcccatt cgcgcttccc cgtcatcggc gaagacaaag acgaagtttt gggcattttg
    10861 cacgccaaag acctgctcaa atatatgttc aaccccgagc agttccacct gaaatccgtc
    10921 ttgcgccctg ccgttttcgt tcccgaaggc aaatctttga ccgccctttt aaaagagttc
    10981 cgcgaacagc gcaaccacat ggcgattgtt atcgacgaat acggcggcac gtcgggtttg
    11041 gtcacctttg aagacatcat cgagcaaatc gtcggcgaaa tcgaagatga gtttgacgaa
    11101 gacgacagtg ccgataatat ccacgccgtt tcttccgaac gctggcgcat ccacgcggct
    11161 accgaaatcg aagacatcaa taccttcttc ggcacagaat acagcagcga agaagccgat
    11221 accatcggcg gcctggtcat tcaagagtta gggcatctgc ccgtacgcgg cgaaaaagtc
    11281 cttatcggcg gtttgcagtt caccgtcgcc cgcgccgaca accgccgcct gcacacgctg
    11341 atggcgaccc gcgtgaagta agcagagcct gcccgcaccg ccgtttctgc acagtttagg
    11401 atgacggtac ggacgttttc tgtttcaatc cgccccatcc gccaaacata aaaatgccgt
    11461 ctgaaaccgg aaaacaggtt cagacggcat ttcgcttatc cgcttatttt ttgctcaaag
    11521 tcagccccgt ccagccgaac agaagcgtca gtgccaaact caaatagcag aaaaaggcat
    11581 acggcagata ttcccacacc ggcacaccca gcgcgtggct gataaatacg ccgcacacgc
    11641 tccacggaac aagcgggttg atgaccgtac ccgcgtcttc gagcgtacgc gagaggttgc
    11701 gggaatgtag tccgagcctg tcgtaaacgg gtttgaacgt ttctcccgaa agcaggatgc
    11761 tcaaatattg ttcgccaatc aggaaattga ccccgaccga agtcatggca acactgaacg
    11821 tcgcgcgtcc ggcattcgtc aaaaagctgc ggacggcatc cagcagggaa ggaatcgcgc
    11881 ccagcgcaaa cagcagtcca cccaaactca tcccgagaat cacgatggtt tgcgtgaaaa
    11941 acatactttc caaaccgccg cgcgaaatca gtttggcaac atctttaaac gcttcgcctt
    12001 cgagtttgta accgccgtaa aaccacgcgc cgagctgacg cagatcgggc gtgctgtgca
    12061 gatacgttac ggcaacggcg gcaatgacgg taaagagcat ggcgaccacg gcattgacgc
    12121 gcatcaatgc caaaacgacc aacagtgcaa acggaatcag cgaatagccg tgcaccaatc
    12181 ccgtggcttc aagctggctg cggaaggatt cgacgccgtt caaatcctgc gcggcgacat
    12241 tcggcaaaag ccaaagcatc agtgccgcac taatgagcca cgcggggatg gtggtgtaca
    12301 tcatattttt gatgtgctca aacaagtcga tgccgacgat ggacgcggaa atgcccgtgg
    12361 tgtcggaaag cggggacatt ttgtcgccaa aaaatgcgcc cgaaacaatc gcgcccgccg
    12421 tcatcgccat atcggcatga aacgccgccg ccatccccat aaaggcaacg ccgacggtgg
    12481 cgcaggtggt caggctgctg ccgatggaca cgccgatgac ggaacacagc gcgaaagcgg
    12541 aaaaataaaa ataagtcggg gaaatcagcc cgaaaccgta atacatcagc gtcggaatcg
    12601 caccgctcat catcagcgcg ctgaccatca gcccgatgaa gaaaaacagg taaatcgcgc
    12661 ccataccctg attcaacgcg cctatcatgc cctgctgcat atcgttgtat ttcaaaccgc
    12721 gcgccaagcc gtacaaaatc agcacgacga tggcggcaat aatggacata tgcggcagcc
    12781 actccaatga aatgatggta tagcccatcg cggcaatcag agcgacgacg acggcaagtg
    12841 cctcaccgcg cggcatatcg agtaaggatt tgaaagcaaa catgattctt tgcccgattt
    12901 gatataaagt taacggattc taacacacca taccgaatcc gcccaacgtt ttcagacggc
    12961 attttagcgt tttacaaaag ccggacagaa acaaaacggc aattttctca atttaaatta
    13021 attttttttg aaatataatt ttttattttt ttgtttgttg gcatataaga cttttatgga
    13081 ttgaaatatt aaaacctcgg cacacacgcc gcaaacaccg gtacgcaaaa atgccgtctg
    13141 aaagatgttc agacgacatt tctcaagaaa aagattattt gtccgcccta tatccgtaca
    13201 ccgcaaaaaa cacgatatac agataacaga tgacggaaac gacaaacgaa gacatcaggg
    13261 tgtaagtatc tgccacccag ccctgcacga caggaacgac cgcaccgccg acaatcgcgg
    13321 tacacagtac accggaagcc gcgttggtaa attttcccaa tcctttggtt gccaaagaga
    13381 aaatcgtcgg gaacataatc gagttgaaaa aaccgatggc aagcagcgac cacatcgcca
    13441 catccgcatt gccgctaccc gtcgccatcg cgacggcaag cagtacgacc gcagccgatg
    13501 cgttaaacgc caaataacgg ttgggcgcga atttcgccat caccgccgaa ccgaggaaac
    13561 gtccgaccat cgcgccgccc caatagaacg acaggtaatg cgcggcagaa gcatgatcca
    13621 gccctttcag ataacccaat acgttgacca tcaacgaacc gatagacacc tccgcgccga
    13681 catagcagaa aatgcctgcc gtaccgaaca cgagatgttt gtattgccat acgctggttt
    13741 tgccgtcgtg gttgtgcgcg ctttcctcgg cggcaatttt gcgcgcgtcg ggcagccgga
    13801 tcattttcac gaaaacggca aggataatca gcagccccgc cagtcccaaa tagggaatct
    13861 gtacggaaga aatctgttcc gccttgctga cggtttgggt tgcgtccgcc aaaatcagga
    13921 acgcgccgat ttgcggcgca atggtcgtac ccaaagcgtt aaacgcctga accagcgtca
    13981 gtgttgccga ttccttgccg ggtttcgcca gcagggtaac ataaggatta ccggcaacct
    14041 gaagcagcgt tacgccggaa gccaaaataa acaacgcgcc caaaaatacc gcgtaagaat
    14101 ggctgcccgc agcaggataa aacagcaggc atccgaccgc cgtcagcaga aagccgccga
    14161 taacgccgtt tttgtagccg actttgccga caaaagcccc catcgggatg gacatcaccg
    14221 cataggcggt aaagaaacag aattggatca gcatcgcctg aacgtaagac aggtcgaaaa
    14281 tttctttcaa atgagggata aggatgtcgt tcatgcaggt aataaaaccc atcatgaaga
    14341 acagcgtggt caagacgacc aatggggacg tatgattgtt ttgtgattgc gcagacatga
    14401 tttgcctttc gtggtgtcgg aatattaccc gtttcaagaa aatagaaatt gacatttctt
    14461 aacggcaatg caaatcatac tgatatttga acattttgca aactttatcg gatgcaggca
    14521 atgcgccgat ctgaaattca agcagcagaa attaatattt tacagttgct tgcatagatt
    14581 ttaatagatt ttaaaaaatt ccggcggact tgcaaaaacc gttcccaata aaatgaaaat
    14641 ccgccgccgt atccggaaaa ttcggaaatg ccgcatcgtg gcatcaaaac cggagcggaa
    14701 agaatgtcgt atgcccgaca aaaaaggggc atacggctgt gccgtatttt ttgcaccgtc
    14761 ctccgccctt cggcgggggc gtgaaaatat agtggattaa caaaaatcag gacaaggcga
    14821 cg
//
LOCUS       DBBZXW010000043        14343 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.043, whole genome shotgun sequence.
ACCESSION   DBBZXW010000043 DBBZXW010000000
VERSION     DBBZXW010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.043"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(31..107)
                     /locus_tag="ACJJD2_001161"
     tRNA            complement(31..107)
                     /locus_tag="ACJJD2_001161"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(71..73),aa:Asp,seq:gtc)
     gene            complement(140..215)
                     /locus_tag="ACJJD2_001162"
     tRNA            complement(140..215)
                     /locus_tag="ACJJD2_001162"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(180..182),aa:Val,seq:tac)
     gene            complement(285..2261)
                     /locus_tag="ACJJD2_001163"
     CDS             complement(285..2261)
                     /locus_tag="ACJJD2_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HGG7579710.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLVMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2410..3249
                     /locus_tag="ACJJD2_001164"
     CDS             2410..3249
                     /locus_tag="ACJJD2_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HGG7579711.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3450..4481
                     /gene="gap"
                     /locus_tag="ACJJD2_001165"
     CDS             3450..4481
                     /gene="gap"
                     /locus_tag="ACJJD2_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG7579712.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKDKLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(4735..5460)
                     /gene="aat"
                     /locus_tag="ACJJD2_001166"
     CDS             complement(4735..5460)
                     /gene="aat"
                     /locus_tag="ACJJD2_001166"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HGG7579713.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFLRDGWFFWYAVGPRAVIVPERLHVPRSLEKTLRNCSYRVTVNGCFAEVVAHC
                     AAAVRPNQDGTWIAPEFQTAYLKLHEMGYAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLASLGVELIDCQQDTGHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(5530..5964)
                     /gene="fur"
                     /locus_tag="ACJJD2_001167"
     CDS             complement(5530..5964)
                     /gene="fur"
                     /locus_tag="ACJJD2_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HGG7579714.1"
                     /translation="MEKFSNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            6191..6568
                     /locus_tag="ACJJD2_001168"
     CDS             6191..6568
                     /locus_tag="ACJJD2_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HGG7579715.1"
                     /translation="MNKTLILVLSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPMLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDVLQNAAEALKDRQNTDKP"
     gene            6578..7387
                     /gene="dapB"
                     /locus_tag="ACJJD2_001169"
     CDS             6578..7387
                     /gene="dapB"
                     /locus_tag="ACJJD2_001169"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HGG7579716.1"
                     /translation="MTPLKIAIAGVNGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKASSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(7501..7911)
                     /locus_tag="ACJJD2_001170"
     CDS             complement(7501..7911)
                     /locus_tag="ACJJD2_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579717.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPTPNYTDWVKIKFKQFSYLKFVYGYATKSQDINIDNTLELGELKQDDEILDYGGA
                     LELIGGRYDFPTAFRIDIVCREIELEFLDQEGFN"
     gene            complement(7913..8146)
                     /locus_tag="ACJJD2_001171"
     CDS             complement(7913..8146)
                     /locus_tag="ACJJD2_001171"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579718.1"
                     /translation="MKQHVLQKKGGEIVINGTSNNKYLRGIPNEGELARVGLRLKYNG
                     PLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(8167..9321)
                     /gene="lpxB"
                     /locus_tag="ACJJD2_001172"
     CDS             complement(8167..9321)
                     /gene="lpxB"
                     /locus_tag="ACJJD2_001172"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HGG7579719.1"
                     /translation="MVDKKSPLIAVSVGEASGDLLGAHLIRAIRERCPQARFTGIGGE
                     LMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVGIDAPDF
                     NLGVAEKLKRTGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLYLDAGGR
                     AEFVGHPMAQLMPLEDDRETARKTLGVDAGIPVFALLPGSRVSEIDYMAPVFFQTALL
                     LLERYPAARFLLPAATAATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAADAVLVTS
                     GTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPELLQHDAV
                     PEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(9387..10379)
                     /locus_tag="ACJJD2_001173"
     CDS             complement(9387..10379)
                     /locus_tag="ACJJD2_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG7579720.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSADGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKVGLPPDLAQFAVMLENGTKM"
     gene            10872..13631
                     /locus_tag="ACJJD2_001174"
     CDS             10872..13631
                     /locus_tag="ACJJD2_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HGG7579721.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQSRNVQPAATVADAAPSETEMQTGKRRRNGSRSE
                     RSQTAPETAAVAETAVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         3632 a         4622 c         3340 g         2749 t
ORIGIN      
        1 aaataccgac agagtcagca ttttgaaact tggcgcggcg gacggggctc gaacccgcga
       61 cccccggcgt gacaggccgg tactctaacc aactgagcta ccaccgcgca tccattgttt
      121 gcaacaatga aagaaaactt ggtgggtgat gacggagtcg aaccgccgac attctgcttg
      181 taaggcagac gctctaccaa ctgagctaat cacccatgaa ttttgcgaaa gcgttattaa
      241 accaaataac cggaaatggc gcaagcctta tttcggcatt tcatttatat tccctgcaaa
      301 ctccagtttt caaaagagat aatttcttct tttttgcctg cgaccaccaa cacgtcaccg
      361 ccttccaatg taaacgaggc atccgggttt tcaatccggc ctgtgcggcg gcggacgaac
      421 aagagtttga tgccgtaagc cgccatcgga agcgtgccga ctgttttgcc gacggcgtat
      481 gcttctgcag ccaaaggaaa ggcgtggcgg acggtttcgc cattttcgcc gaatcctgcc
      541 tcatcatcac taccgacaaa caaaccctcc aacgcggcat aacggctgtg gcggatattt
      601 gccatcgtct gatagacgtg ccggtacgac gcgccgttgc ctaacatcgc atagcctgcc
      661 agcacgagtc cggtttcttt ggtgtccgac acggcttctt ccgcacctat atcggtaaac
      721 gttttcacat aatcgtcgtt ggtggcgcgc acatatacgg gcatattggg atacatggac
      781 agcacattgt ctaaaacgtg ttgcgtttcg tgcatattgt tgagcgtcag caccaccatt
      841 ttcgcccgcc ccaaaccggc ggcttccaat acttccctgc gtttcgcatc gccgaacgac
      901 accggttcgc ccgcacttct ggcaacctgc acccgcgcaa tgtccaagtc gagcgcgaaa
      961 tacggaatat cctcttgggc aaggacgcgt ccgaccgtct gcccgcccct gccgaagccg
     1021 acaatcagca catggtcgga cttgctcatg gtttctacca gcatactgtg cagatcgagc
     1081 gacttcatgt cccagcttga cttgaccaaa cgcccgacca gcgcatcgct gccgcccaag
     1141 aggaagggcg cgataatcat cgacagcagc accgccgccg tcgccgcctg ttcccattct
     1201 ggcgaaacca tatcaagctg cccggcaatg gccagcatca cgaagccgaa ctcgccgcct
     1261 tgtgcgagat acaaagccgt tttgaggctg tcgccgaccg aatgtttcat tttgaaggca
     1321 atggcaaaca caaccagtgc cttcaacacc agcagcatta ccaacagcat caatacctgc
     1381 cgccagccgc cgatcaatgc ctgaatgtcc agcttcatgc cgaccgtgat aaagaaaaag
     1441 ccgagcaaaa tatcgcggaa cgggcggatg tcgtcttcga cttggaaacg gtattccgtt
     1501 tccgaaagca gcatccccgc cacaaacgcg cccaacgcca tagacaaacc ttccagctca
     1561 gtcagataag ccacacccaa ggttaccagc agcacattga tcataaagag ttcggacgat
     1621 ttgcgttttg ccaccatcct gaaccatcgc gacataattt tgctgccgac gaaaaacagc
     1681 agccccagcg tcagcagcat ttttgcaaac gccaaaccca aggccgccca aatatttccg
     1741 tcccctccgc ccgccagcgc gggaatcaga atcatcagcg gcacgacggc gatgtcctgc
     1801 atcagcagca cgcccatcgc catctgaccg tgcggctgcc ccaattccgt cttttccgac
     1861 aaaatccggc tcacaatcgc cgtggacgac atcgccaacg cgcccgacac ggcaaacgcc
     1921 caattgaacg gcacgcccgt cagcatcagt atgcccatta ccgacagcat cgtaacgccg
     1981 acctgcaaac cgcccagccc gaataccagc cgcctcatcg ccctcaactt gggcagcgag
     2041 aactccaaac caatgctgaa catcaggaac acaatcccga tttcacccaa ataatccgtc
     2101 gcatggcttt tcggaatcag gctgagcata ccgggccccg ccaaaaagcc caccagcagg
     2161 tagcccagca tggagggaat gttgaacttg cggcacagga tcaccgtaat gaccgacacc
     2221 agcaaaacaa ccacaatagg ggcaagcgaa aattcgttca tagaccgtcc gaacaggaaa
     2281 atacagaaaa atgccgtctg aaacggcata cgccgccgta ttataacaaa acaccgcgca
     2341 ccatccgaaa cgggcgcggc atacaattct gctaaaatac gccctttcga ttttgagccg
     2401 cacaccgaca tgaccgccac agccgccgcc atagaccgcc tgcttcccca aacccaatgc
     2461 cgcgaatgcg gctacgacgg ctgcctgccc tacgcacagg cagtcgcaac aggcgaagcg
     2521 tacaacctct gcgccccggg cggagaagcc gtcattcggg acatttccgc cctgctcggc
     2581 aaaccccttg tcgcacctgc caaaacccaa gccaaagcac tcgcccggat agacgaaacc
     2641 gcctgtatcg gctgcaccgc ctgcatccgc gcctgccctg ccgatgccat tatgggtgcg
     2701 ggcaaactta tgcacaccgt catcgccgac gaatgcaccg gctgcggact ctgcgtcgcc
     2761 ccctgccccg tcgactgcat ccatatgcag cccgttgccg acaccgtcct gccccgcgcg
     2821 cgccgcttca gcctgtccgc cgacagccgt tttgccgccg ccgaacacgc gcgtgcgcgc
     2881 tacctcaaac gcaacgaacg caaacagcgc gaagccgacg aacgcaaggc catgcttgcc
     2941 gaacgcgaag ccgccgtccg caacgcgcgt ccgcaaacac ccgacacacc gaaaaaaccg
     3001 gcgtttaacc ctgccgacct catcgccaaa gccatggcaa aagcgcaaac ccaacaagac
     3061 cgcctcgccg ccgccgacaa ccgcaaagac tatcaggcga aacagatagc cgaagcccgc
     3121 gaacgcgccg agttgcgccg cgcccaacgc gatatgaaat acggcagcga cagcgaaaaa
     3181 gccgccgccc tcgaatatct caaacaatac aaagccaaac aggaagccgc acagaatacc
     3241 gcctcctgac ccttccctga tatgccgtct gaaaaccgtt tcagacggca ttttatcaag
     3301 ctctccgtcc gccgcacccg tgccgtccgc atcttaccgc ccacccttcc ggccgcgccg
     3361 ttttcaataa aatattaatt acacgccact acaaatttgc tataatccgc cccgaaaatc
     3421 tacccaaccc ctcaacaaag gaacaaacca tgggcatcaa agtcgccatc aacggctacg
     3481 gacgcatcgg ccgccaggtt ttgcgcgcca tctacgatta tcagattcaa gaccaactcc
     3541 aaatcgtcgc cgtcaacgcc agcggcagcc ttgaaaccaa cgcccacctc accaaattcg
     3601 acaccgtgca cggacgcttt gaagccgacg tatcccacga cggcggcaac ctcatcgtca
     3661 acggcgacaa aatccccttc ttctcgaccc gcaaccctgc cgaactgccg tggaaagaac
     3721 tcggtgtcga tttggtcatg gaatgcaccg gcgcgttcac cagcaaagaa aaagccaaag
     3781 ttcatctgga aagcggcgcg aaaaaagtcc tcatttccgc accgggcggc gacgatgtcg
     3841 atgcaaccgt cgtgtacggc gtgaacgaca gcatcctgac cgccgacatg accgtcgttt
     3901 ccaacgcttc ctgcaccacc aactgcctct cgccggttgc caaagtgttg agcgaaagcg
     3961 tcggcatcgt caaaggcgcg atgaccacca tccacgcgct gaccaacgac caaaccgtta
     4021 ccgacgtgcg ccacaaagac ctgcgccgcg cccgcagcgg cgtggaaaac atgattccga
     4081 ccaaaactgg cgcggcaaaa gccgtcggac tggtactgcc cgaattgaaa gacaaactcg
     4141 acgggcttgc catccgcgtg ccgaccgtca acgtatcatt ggtagatttg aacttccaag
     4201 ccgcgcgcga cacgacaatc gaagaaatca acgcactgat gaaagccgcc tcggaagcag
     4261 gcgcgctcaa aggcgtttta ggctacaaca ccctgccctt ggtttccatg gacttcaacc
     4321 acaccaccga agccagccac ttcgacgcaa cactgaccaa agtcgttgac ggcaacatga
     4381 ttaaagtctt cgcatggtat gacaacgaat ggggcttcag ctgccaaatg ctgaacaccg
     4441 cacgccgtat gttcggactt gaagtgcgcc cgctcaaata agcaataaac cgtcaaacaa
     4501 aatgccgtct gaaacccgat gttttcaagt tccagacggc atttttcatt tttcaccgtg
     4561 attttacccg gctgtcgtca tttctaattt tatagtggat taacaaaaac cagtacggcg
     4621 ttgcctcgcc ttgccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt
     4681 tgttaatcca ctataatcca ccatatttga acctgaccga agcataagcc gccatcaaag
     4741 ccccttgcac gccacttcgc gccgcccgat ttcctctttc aacggcacgg cgttcaacat
     4801 ccgcagacgt tcggcaaaat ccgcaaacgg cagcagctcc gaaccgaaac ggcgcatatg
     4861 ccccgtatcc tgctggcagt ctatcagttc cacacccaaa gacgcgagaa acggcacggc
     4921 gcaggcaaac gcgattttcg acgcatccgg ttgtaatgcg aacatcgatt cgccgtaaaa
     4981 caccctgccg atctgaacgc cgtaaaaccc gcccgccaac ctcgttttac cgttttcatc
     5041 gggataatgg cactcaaacg aatgcgcgta tcccatttcg tgcagcttca aatatgccgt
     5101 ctgaaactcg ggcgcaatcc aagttccgtc ctgattcggg cgcaccgctg ccgcacaatg
     5161 cgcgaccact tccgcaaaac agccgttgac cgtaacccga tagctgcagt tgcgtagcgt
     5221 tttctccagc gagcgcggaa cgtgcagacg ttcgggaaca atcaccgcac gcggcccgac
     5281 cgcataccaa aaaaaccaac cgtctcgcaa aaaccaagga aacacgccgt tccgatacgc
     5341 ctcgagcagc cgccccgcgt ccaaatccct gctcacgccg accagcccgt cgcaccgtgc
     5401 caaagcatag gcaggatcgg gaaaggcata attgtcaggg gcaagcagcg gaatacgcat
     5461 ggcagttctc caaaaacaca gacggcatcc aaaatcatga atgccgtctg aacaacaaac
     5521 cgtccggatt taacgtttgc ccttggcctg acagtcgctg cacacgccgt acatataaag
     5581 cgcgtgatcg acgatgcggt agccgttttc ctcggcgatt ttgtcttgca gggcttcgat
     5641 ttcgggattg tggaattccg ttacctcgcc gcacttcaca cagacgatat ggtcgtggtg
     5701 gtcgcccttg tccaactcat aaaccgcctt gcccgtttca aaatggtggc gttgcaaaat
     5761 gcccgcctgc tcaaattgcg tcagcacgcg ataaatcgtc gccacaccga tttccacacc
     5821 ctcttccaac aaaatacggt acacatcctc ggcactcaaa tgctcttccg catgagtctc
     5881 gaacaaatcc aaaatcttca aacgcgggcc ggtaactttc agtccactgt ctttcagttg
     5941 cgcaatgttg ctgaattttt ccataatatt caatatccct gtaaaataat agacgctata
     6001 atacgcaatt tcagcctgct tgcccactat cacaccatag cagtttgcaa tagcaaaacc
     6061 gcaacggcgg acgggcagtc ggacacagac agggtgaaat accgcttaag cgtatgatta
     6121 tcgttcgctt ttataaaata ttcaagcagt gctacactag acatcccgat ttgcacagaa
     6181 aggttctccc gtgaacaaaa ccctcatact cgtcctttcc gccctgttca gcctgaccgc
     6241 gtgcagcgtc gaacgcgttt cactgttccc ctcgtacaaa ctcaaaatca tacagggcaa
     6301 cgaactcgaa ccccgcgccg ttgccgccct gcgccccggc atgaccaaag accaagtcct
     6361 gctcctgctc ggcagcccca tgctgcgcga cgcattccat accgaccgct gggactatac
     6421 cttcaacacc tcccgcaacg gcatcatcaa agaacgcagc aatctgaccg tctattttga
     6481 aaacggcgta ctcgtccgca ccgaaggcga cgtcctgcaa aacgctgccg aagccctcaa
     6541 agaccgccaa aacacagaca aaccataagg aacacacatg acaccgctca aaatcgctat
     6601 cgccggcgtc aacggccgca tggggcgcgt attggttgaa gccgtcaaca accatcccga
     6661 caccgtcctt tccggcgcgc tcgaacactc gggctcagaa gccctcgggc tggacgcagg
     6721 ctacgccgtc ggactcaaaa ccggcatcgc catttcagac gacgttgacg ccgttctcgc
     6781 acaaagcgac gtactcatcg acttcacccg ccccgagccc accctcaaac acctgcaaaa
     6841 atgcgttgaa aaacaagtca acatcatcat cggcacaaca ggcttcgacg atgcgggcaa
     6901 agccgctatc cacactgccg ccgaacaaac aggcatcgtt ttcgccgcca acttcagcgt
     6961 cggcgtcaac ctcaccttcc acatcctcga caccgtcgca cgcgtattaa acgaaggcta
     7021 cgacatcgaa atcattgaag gccaccaccg ccacaaagtc gatgccccca gcggcaccgc
     7081 gttacgcatg ggcgaagtca tcgccggcgc gctcggcaga gacctcaaac aatgcgccgt
     7141 ttacggccgc gaaggccaca ccggtccgcg cgatccgtcg accatcggct ttgccaccgt
     7201 ccgcgcaggc gacatcgtcg gcgaccacac cgccctcttc gccaccgacg gcgagcgcgt
     7261 ggaaatcacc cacaaggcca gcagccgcat gacctttgcc gccggtgccg tccgcgccgc
     7321 agtttgggta aacggcaaaa cgggtttgta cgatatgcag gacgtactcg ggctgaacaa
     7381 ccgttaaccc ccatacaaaa tgccgtctga aaagatattg ttcagacggc attttgccaa
     7441 caggctccgt atcggcatat caataaagtt gcttgcgcgg catgacaagc tacggctcgt
     7501 ttaattgaaa ccctcctgat ctaaaaattc taactctatt tcccggcaaa ctatatctat
     7561 cctaaaagca gtcggaaaat catacctacc gcctatcaat tccagcgcac ctccataatc
     7621 caagatttca tcatcctgct ttaattcgcc aagttccaat gtattatcga tatttatatc
     7681 ttggctcttt gtagcgtatc catagacaaa tttcagatag ctgaactgct tgaatttaat
     7741 ttttacccag tctgtataat ttggtgtagg aatctcttga ggaaagtccg gataatccac
     7801 attctggacg atgatatgga attcatcgtt tttcaaagta tagtttaata gagtgccctc
     7861 atatatatac agaaattgat aatctttttt tggaatggta taagttgtca tattatttta
     7921 ccttttcaaa aacaatgagt ttaagatttt ttgagtccaa gttggttcta ctactcttat
     7981 gaaatttcag ttgtttaaac tcttccttta acggcccatt atattttaac cttaatccca
     8041 ctcgagccag ttctccttca tttggaattc ctcttaaata cttattgttt gatgtgccat
     8101 taatcacaat ttctcccccc tttttttgta atacgtgctg cttcaagaag ataatccatt
     8161 aaccgctcaa catcccgcct cttccaaaac cgcgcgcgcg gccaaatccg ccgtatcttt
     8221 tttcaacagc aggtgcaacg ccctgaaatc ctgttgcagc gcggcaacct tatcggggtg
     8281 ttcgtaccag tccgccaacg ccgccgccag tttttccggt acggcatcat gttgaagcag
     8341 ctccggcaca gcctccttac ccaacaggat attcggcagg ccgacatgcg gcactttgat
     8401 tttgcgtttc acataagcat aagtcagcgg cgaaatcttg tagctgatga ccatcggacg
     8461 cttgcacaga gccacttcca aagttgccgt accgctcgtt accagcaccg catccgccgc
     8521 cctgcacact gtttcagact gtctgtcgat taccgtcagc ggcaatccgg caaactccgg
     8581 ccgctgcaaa acttccgcca aacgccgctt cgtcgccgcc gttgcggcag gcagcaggaa
     8641 gcgtgcggca ggatagcgtt ccaacaacaa taatgccgtc tgaaaaaaca ccggcgccat
     8701 atagtcgatt tcgctgacgc ggctgccggg cagcagggcg aatacgggga tgccggcatc
     8761 cacgcccaaa gttttccgcg ccgtttcacg gtcgtcttcc aagggcataa gctgcgccat
     8821 cggatgaccg acaaactccg cacgtccgcc cgcatcgaga taaagctgcg gctccatcgg
     8881 gaacaggcac agcacgcggt tgacctgatg cacgattttg cccacgcgtt cccgccgcca
     8941 cgcccacacc gacggactga cataatgcac ggtcggaatg cccgtccgtt tcagcttttc
     9001 cgccacaccc aaattgaaat cgggcgcatc gataccgaca aagacatcag gtttcaacga
     9061 cagcaaatcc cgtaccagcc ccctgcgtat ccgtaaaatt tccggcagcc gcctgaccac
     9121 ttcgacaaag ccgcgcaccg ccagccgctc ctgatcataa aggctctcga aaccttccgc
     9181 cttcatcagt tccccgccga taccggtaaa ccgcgcctgc gggcaacgct cgcggatggc
     9241 gcgtatcagg tgcgccccca acaggtcgcc cgacgcttcg ccgacactga cggcaatcaa
     9301 agggcttttt ttatcaacca tattcgttct tcttcacata ctttcacgtc ccgatgccgt
     9361 ctgaaggctt cagacggcat cggggttcac attttcgtcc cgttttccaa catcaccgca
     9421 aactgtgcca aatccggcgg cagccccacc tttaacacca gcggctcgcc cgtgagcgga
     9481 tggttcaggt gcagctcgga cgcgtgcaaa aacatccgct tcaaacccaa cttctgcaaa
     9541 cgacggttcg cctgataatc gccgtagcgt tcgtcgcccg caatcggaca gccttgagat
     9601 tgcaggtgga cgcggatttg gtgcgtgcgc cccgttttca acgtcgcccg caccaaagtc
     9661 aggtgcgaca gcccgacacc gtgcaaaatg ccgtctgaaa aacggcttaa cacacggaac
     9721 accgtatgcg ccgactgccc gtccgcactg acgcgcacca tcttttcgcc ttgtgcgccg
     9781 gtatatttga acaggggcag tttgacatgg aaattgtcgt ccggcagttt gcccaccccc
     9841 agcgcaaggt agattttttt ggggtggtcg ttacggatgg cttcgtgaag tttgacgagc
     9901 gcgctgcgtt tcttcgccac catcaacaag ccgctcgtat ccttgtccaa acgatgaacc
     9961 aactccaaat acttcgcctc cggacgggcg cggcgcaact gttcgataac gccgaaactc
    10021 acgccgctgc cgccgtggac ggcaacgccg gacggtttgt cgatgaccaa aagcgcatcg
    10081 tcttcgtaaa caacgtcaaa cgcacgcgcc ggtacggcgg cacgcctttc agacggcatt
    10141 tccttctccg ccacgcgcac aggcggaatc cgcaccgtat ccccctccgc aatacggctg
    10201 tcgggtttgc agcgtttctt gttcaaccgc acctcgccgg cgcggataat gcggtggata
    10261 tggctcttgg gaacaccctt gaggattttt atcagatagt tatcaaggcg ttgacccgcc
    10321 tcatgttcgg caacccctat caagctgacc gaatctttgc ttatttcgtg cgttttcatc
    10381 tataatccga acatccgttt cagcaaaaag cgcgcccgcc gcgcctcctg aaacggttta
    10441 ctttaaaacg gaattttata ttaaaaacgc actccgcaaa gcattttccc tgcgcctgtt
    10501 cccagccggc aggcgcagaa cgtaatcaag tttgaattga ttttgccgtt tcggcgcgga
    10561 agtaagacgg cagccgggcc caagtcccaa acgcaaaccg cccaaaacac aggcatcacg
    10621 ataacaagaa gaagccggcc cccatttttc cgaccgcagc gttcggaacg cggcagacaa
    10681 accgccgcat cgatctttat agccttctgt atccgaccct tccgcacacg gttctccgga
    10741 acgtgcatcc ctgcggattt tcaactcaaa aactgattac cggttttatc cgaaaacatc
    10801 ggaaaaccca gccttacgga atgccgaacc gggcatgtgc cgtctgaacg ccgcctgccc
    10861 acgaggtgat catgaaaaga atgttattta acgcaacgca ggccgaagag ctgcgcgttg
    10921 ccatcgtcga cggacaaaac ctgctggatt tggacatcga aacgctgggc aaagaacagc
    10981 gcaaaggcaa tatctacaaa ggcatcatta cccgcatcga gccgtcgctg gaagcgtgtt
    11041 tcgtggatta cggaaccgac cgccacggct tcttgccgtt taaagaagtc tcccgctcat
    11101 acttccaaga ctacgaaggc ggacgcgcgc gcatccaaga cgtgctcaaa gaaggcatgg
    11161 aagtcatcgt ccaagtcgaa aaagacgagc gcggcaacaa aggcgccgcg ctgaccacct
    11221 tcatcagcct cgccggacgc tatctggtat tgatgccgaa caacccgcgc ggcggcggcg
    11281 tatcccgccg tatcgaaggt gaagagcgtc aagagttgaa agccgccatg gcggaactcg
    11341 acattccgaa cggcatgagc atcatcgccc gtaccgccgg catcggccgc agcgcggaag
    11401 agttggaatg ggacttgaac tacctcaaac aactctggca ggcgattgaa gaagcaggaa
    11461 aagcgcatca cgacccctac ctgctcttta tggaaagctc gctgctgatc cgagccatcc
    11521 gcgactattt ccgccccgac atcggcgaga ttttggtgga caatcaagaa gtttacgacc
    11581 aagttgccga gttcatgagc tacgtcatgc cgggcaatat aggccgtctg aaactctacg
    11641 aagaccacac gccgctgttt tcccgcttcc aaatcgaaca ccaaatcgaa agcgcgtttt
    11701 cgcgcagcgt cagcctgccc tccggcggcg cgatcgtcat cgaccatacc gaagccctcg
    11761 tctccatcga cgtgaactcc gcacgcgcca ctcgcggcgc agacattgaa gacaccgcgt
    11821 tcaaaaccaa tatggaagcc gccgaagaag tcgcccgaca aatgcgcctg cgcgacttgg
    11881 gcggcttggt cgtcatcgac ttcatcgaca tggaaaaccc caaacaccag cgcgatgtgg
    11941 aaaacgtcct gcgcgacgcg ctcaaaaaag accgcgcccg cgtgcagatg ggcaaactct
    12001 cccgtttcgg acttttagaa ttgagccgcc aacgtttgaa accggctttg ggcgaaagca
    12061 gccacgtcgc ctgtccgcgc tgcgccggca ccggcgtgat tcggggcatc gaatccaccg
    12121 ccctgcacgt tttacgcatc attcaagaag aagcgatgaa ggacaacacc ggagaagtgc
    12181 gcgcacaagt gcccgtcgat gtcgccacct tcctgctgaa cgaaaaacgc gccgagctgt
    12241 ttgcgatgga agagcgtttg gatgtcaacg tcgtcctgat tccgaacatc cacctcgaaa
    12301 atccgcacta cgaaatcaac cgcatccgca ccgacgacgt agaagaagac ggcgaaccga
    12361 gctacaaacg cgtcgccgag ccggaagaag acgaatccgc caaaccgttc ggcggcgaaa
    12421 aagccaaagc cgcccgtccc gaacccgccg tcaaaggcgt gcgccacacc agccccgccc
    12481 cgactgccgc ccccgagaaa aaaacctctt ggtgggacag cttcaaagca tggctcaaac
    12541 gcattttcgg cggcagcgaa acccaagccg cgcccgctgc cgaaacctcc gaaaaacgca
    12601 gcacggcaaa ccgcagcggc agccgcgcca acaaccgccg ccaaaacccg cgccgcagca
    12661 aacgcgaagg cagcaaagta gaagtccgcg aagtggcagg caaaactgcc ggacaggaag
    12721 cgcgtgccga caaagccgaa acgcgcaaca acggcaaccg ccgccgcaat gaacgcggcg
    12781 accgtgccgc cgaacgcgcc aacgaagcgg aaatccaaag ccgcaacgta cagcctgccg
    12841 caaccgttgc agatgccgca ccgtccgaaa ccgaaatgca aaccggcaaa cgccgccgca
    12901 acggcagccg cagcgaacgc agccaaaccg cgccggaaac cgccgccgtt gccgaaacag
    12961 ccgttcagac agcggaaaac acgccgtccg aaccgcatac cgcagaagac aaaggcagca
    13021 agcccaaatc cgaacgcaac cgccgcgaac gcgacagccg cgacgccaaa gaacgccgcg
    13081 agcgcaacaa tcagcgcgac cgccgtcaaa acggcaaaaa acgcaatatc ccgtctgccg
    13141 ccaaaatcga gcagtacctg aatattcacg acaccgccga caaagtccgt tccgccgccg
    13201 cgcacgtttt cggcgaaacc gacgcaaacg cgccgattac cgtcagcatt gccgatccgg
    13261 ttgcagaaag ggatcttccg acagcatctc ccgccgtttc aaacggcgac gcaccggttt
    13321 atgatgcggc ggaaaaaatc cgccgtgcca ccgccgccat cctgcccgaa ggcgcgacac
    13381 cgaaagccga agcacaggaa atgccgtctg aaaccgcaac ctttacggct gcggcggaac
    13441 aggcacggga aaccgcacaa accggcggac tcgtcctgat cgaaaccgac cctgccgcat
    13501 tgaaggcatg ggcggcacaa cccgaagtcc aaaccggacg cggtttgcgc cgttccgaac
    13561 agcccaagcc gtctgaagtc gcaaccgtcc ctgccgaaga aatgatccaa gtcgaaaccc
    13621 ggcaaggctg aaccgacggc ggcaaaaaga ggttctgttc cgcagaacct cttttttata
    13681 tagattcgga tacctgcaat gccgtctgaa gcctcaccat tcccatgatt accgcaacct
    13741 ttcgtcattc ccgtgaaaac gggaatctag aacctcaaac tttcaaataa cctttgaata
    13801 ttgccgctgc cttaaggtct ggattcccac ctgcgcggaa tgacggttta gaagttgccc
    13861 gaaacctcaa aaaaaactga aaccgaacaa gccggattcc cgcaacattc cgtcattccc
    13921 gtgaaaacgg gaatatagaa ccccaaactt tcagataatc tttgaatatt gccgtcgccc
    13981 aaaggcctgg attcccgcct gcgtgggaat gacggcggag ggtggacgat gccgtctgaa
    14041 acttcgccat tcccatgatt accgcaacct ttcgtcattc ccgccacctt tcgtcattcc
    14101 cgtgaaaacg ggaatataga acctcaaact ttcagataat ctttgaatat tgccgccgcc
    14161 caaaggtctg gattcccgcc tgcgcgggaa tgacggcgga gggtgaacga tgccgtctga
    14221 aacttcacca ttcccatgat taccgcaacc tttcgtcatt cccgtgaaaa cgggaatcta
    14281 gaacctctaa actttcagat aatctttgaa tattgccgtc gcccaaaggc ctggattccc
    14341 gcc
//
LOCUS       DBBZXW010000044        14299 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.044, whole genome shotgun sequence.
ACCESSION   DBBZXW010000044 DBBZXW010000000
VERSION     DBBZXW010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14299
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.044"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(86..568)
                     /locus_tag="ACJJD2_001175"
     CDS             complement(86..568)
                     /locus_tag="ACJJD2_001175"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG7579722.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(721..882)
                     /locus_tag="ACJJD2_001176"
     CDS             complement(721..882)
                     /locus_tag="ACJJD2_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579723.1"
                     /translation="MSGQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            complement(956..1417)
                     /gene="recX"
                     /locus_tag="ACJJD2_001177"
     CDS             complement(956..1417)
                     /gene="recX"
                     /locus_tag="ACJJD2_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HGG7579724.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQTA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            complement(1492..2202)
                     /locus_tag="ACJJD2_001178"
     CDS             complement(1492..2202)
                     /locus_tag="ACJJD2_001178"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HGG7579725.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            2609..3874
                     /locus_tag="ACJJD2_001179"
     CDS             2609..3874
                     /locus_tag="ACJJD2_001179"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HGG7579726.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNE
                     ASYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            complement(3931..4737)
                     /locus_tag="ACJJD2_001180"
     CDS             complement(3931..4737)
                     /locus_tag="ACJJD2_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HGG7579727.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            5081..5290
                     /locus_tag="ACJJD2_001181"
     CDS             5081..5290
                     /locus_tag="ACJJD2_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HGG7579728.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            5379..6593
                     /locus_tag="ACJJD2_001182"
     CDS             5379..6593
                     /locus_tag="ACJJD2_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HGG7579729.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(6680..9259)
                     /gene="clpB"
                     /locus_tag="ACJJD2_001183"
     CDS             complement(6680..9259)
                     /gene="clpB"
                     /locus_tag="ACJJD2_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HGG7579730.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDIMPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            9520..10530
                     /gene="trpS"
                     /locus_tag="ACJJD2_001184"
     CDS             9520..10530
                     /gene="trpS"
                     /locus_tag="ACJJD2_001184"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HGG7579731.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            10536..10877
                     /locus_tag="ACJJD2_001185"
     CDS             10536..10877
                     /locus_tag="ACJJD2_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579732.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVVGKCMETDGKGAPSGW
                     AANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            11199..11522
                     /locus_tag="ACJJD2_001186"
     CDS             11199..11522
                     /locus_tag="ACJJD2_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579733.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKM
                     KDAAK"
     gene            complement(11731..13239)
                     /gene="ppx"
                     /locus_tag="ACJJD2_001187"
     CDS             complement(11731..13239)
                     /gene="ppx"
                     /locus_tag="ACJJD2_001187"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HGG7579734.1"
                     /translation="MTTHPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(13355..14195)
                     /locus_tag="ACJJD2_001188"
                     /pseudo
     CDS             complement(13355..14195)
                     /locus_tag="ACJJD2_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714481.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
BASE COUNT         3217 a         3558 c         3921 g         3603 t
ORIGIN      
        1 atccactata tttgcttgat ttcatccgtt tgcaatggaa acggatggcg cgatgtgcct
       61 gtctttcaga cggcatagtc cgccgtcagc agccgcagga catgtcttca gaggcttgca
      121 ggctgatgtc tctgcgtttt ttggcttttt cgtagcggca gcgttggcgg tcggtcagga
      181 tttccagcgg agggacaggg acgggtttgc cgtctttgac cgcaaccatc gtgaagtagc
      241 agctgttggt gtggcggatt tcgccggtgc ggatgttttg tgcttcgaca cggatgccga
      301 tttccatcga ggtgcgtccc gtgtagttga cagcggcgta aaaggtaacc aaatcgccga
      361 tgtggatggg ttctttaaac aggactttgt caaccgacag ggtaacgcaa taattgccgc
      421 tgtaacggct ggcgcaggaa taggcgactt ggtcgagcag gagcaggagt tcgccgccgt
      481 gtacgttgcc gctgaaattg gcggtgtccg gcatcatcag ttcggacata atgagttcgt
      541 gggaaggcag ttggcgttgt tgtgtcatgg tgtacctgtt ttaagaaagg gtgttttgaa
      601 atgggtgcgg ggaaatttta gggaatgggg aagtggaatt caagctaaaa aaagctatga
      661 tgggatagtc tgccgaaatg gaccgccgat gccgtctgaa gccttcagac ggcattttgt
      721 ttaggaaagc caaaaacgga agaccaggaa aaacacgagt gccaatacgg cgacccaaac
      781 gacgagcatg aatccggcaa ctgcccgtcc catacggtaa accgggtttt tgcgttcgtc
      841 ttcgatgggg gaggtgtggt gtttttcggg ttgtccggac attttgttct caatcggaaa
      901 agttggaaac gggcgtaagg ttatgttgcc gtgcaaaaag attcaagaag gaaggtcagc
      961 agccgtcttc ccaattttcg tcccaagcgt gtttcaatgc cgtctgaacg gtatcggcat
     1021 cgaatccgcg ataggcgagg aaacgcgcct gtttttgttt ttctttaagg tcggcggcgg
     1081 ggtgtttgaa ttttttacgc aacacgtcta tggcggtctg tttttcgctt gagcggtcgg
     1141 gaagcaggtt gcggctggtt tcttcatcta tgccctgttg cgccaaagcc tgtttcagcc
     1201 tcaatgaacc gtgtttgcgg cttttgctgc ggatataggc ttcggcatag cgcaaatccg
     1261 actgccagtt gcgttcggca aattcgttta acacgttttc caactcttct tcgctttcgg
     1321 cgtgcggtgc aagtttgcgt ttcagaccga tgcggctgac ttcttggcgc gagaggatgt
     1381 ccatcgcgcg ggcgcgtagg gatttttgcg gtttcatggc ggcggtttcg gcgtggggca
     1441 ggtttcagac ggcatgggaa acggattccg atgccgtctg aacagattgt tttattcttc
     1501 gtctttattt ttctgcggtt gcaggttttc gtaaatttcg ggcagcgagc cgataatcca
     1561 gtcggggcgg gtcgcatcgt cttgcgagag cagcgtcata tcgccgtaac cgaaggtaac
     1621 gccgacgctc aggcagccgg cggctttggc ggcgatgatg tcgttgcgcg agtcgccgac
     1681 cataaccatg tttgcaacat cgatacccaa aacttcggcg gcatgccgca gcggcagggg
     1741 gctgggtttt ttctcgggca ggctgtcgcc gccgagtatc aggctgaagt agtcggcaag
     1801 tccgagctgt ttcaacagtt cgacggcaag gatttcgttt ttgttggtaa tgactgccag
     1861 cgggatgccc aaagatttga gcaatgccag cccggcttcg gtttcgggat aggggcgggt
     1921 gaagacgctc aaatggtcgc ggtagtattt catataggat acgaaacctt tttcccacag
     1981 ttcggaatcg gcttcgcggt cgcggtcgtt ggtgaggacg cggtgaacca gtttgccgat
     2041 gccgtcgccc acatagcttt cgaccacttt tgcaggcagc ggtttcatac cgagttgctc
     2101 caacatcgct tctgcggcgg cggcaaggtc ggggacggaa tcgcacagtg tgccgtccaa
     2161 atcgaaggcg acggcttgga cgtgttcgat ggctgcattc ataatctgat ttcctgtcgg
     2221 gttgaaaggg tttattttaa catcgtttgc acagggcttc taatgtatag attgttaaca
     2281 atcgcaacag gttttgcagg cggtgttttc ggatttcggg gcggaatcgg gcaagggttt
     2341 gaaatcccgg cgatgttcca attaaatttt taaaaaataa aaggatgcct atatctttat
     2401 ttaatttgac atttattttt cggacgcgcg cgctgctttt tcaggcggag tccgggctga
     2461 ttccgtgcgg cttgaaaaat aaaatcatat atagattaat caaatcgggc ttatgccgac
     2521 tacacgctat tacattttgt cgggaaattg gttatagtaa tgagcgaaat gcacgcccct
     2581 gaaaatcttt ttgtgaaaag gaagcaaaat gtctgaagcc cttgcaaaag aaaccctcaa
     2641 tccgtttgaa atcgcgcgca aacaggtcaa aaccgcctgc gaccggctga aaaccgatcc
     2701 ggccgtttat gaaatcctga agagtccgac ccgcgtgttg gaagtcaatt tccccgtcaa
     2761 actcgacgac ggcacggtca aaaccttcac gggctaccgt tcgcaacaca acaacgccgt
     2821 cggcccctat aaaggcggcg tgcgcttcca tcccggtgtg aatctggacg aagtcaaagc
     2881 cctgtcaatt tggatgacca tcaaatgctg cgtggccggc attccttacg gcggcggcaa
     2941 aggcggcgtt accttggatc cgcgcgatta ttccgaggcg gaactggaac gcatcgcccg
     3001 cgcttattcc gaagccattt ctccgctcat cggcgaaaaa atcgatattc ccgcccccga
     3061 tgtgaatacc aacggcaaaa ttatgtcgtg gatggtggat gcttatgaaa acgtggtgaa
     3121 acattccgcg ccgggcgtat ttaccggaaa accggttgag ttcggcggct ctttggcgcg
     3181 taccgaggct accggttacg gcgtgaacct cgccgccgtc caagctttgg aaaaactggg
     3241 caaggacgtg aaaggcgcga cttacgccat ccaaggcttc ggtaatgtcg gttaccacac
     3301 aggttattac gcgcatcaat ccggcgcgaa agttgttgcg gtttctactg ttgacgttgc
     3361 catctacaat gaaaatggct tggatatgga agccctgttt aaagagttcc aagaaaaagg
     3421 cttcatcacc aacgaagcca gttacggcaa agaaattacc aacgccgaac ttttggcttt
     3481 ggatgtggac gtactcgccc cttgcgcgtt ggaaaaccaa ctgacttccg aaaacgccgg
     3541 taaagtccgc gcgaaaatcg tggtcgaagg cgcgaacggc ccgactacgc ccgaagccga
     3601 cgttatcctg cgtcaaaacg gcgtattggt cgtgcctgat attttggcga actgcggcgg
     3661 cgtggtggta tcttattttg aatgggtaca aaatctgcaa ggctactact gggagtttga
     3721 cgaagttcag gaaaaagaaa ccgtcgtcct gcgccgtgcg ttccgcgata tatggaactt
     3781 ggcgcaagag tatgatgtcg atttgcgaac cgcgtcttac atgatgagta tccgccgtgt
     3841 tgaaaaagcg atgaaactgc gcggttggta ttgatgtttg aacaaaaaat gccgtctgaa
     3901 gccttcagac ggcattttgt gcgggcggga ttaatggtgc gaatggccga tttggaaggt
     3961 taaagtcgag tagttcgcct gtttttggca cacgctttga tcggggaagt cggctttgtg
     4021 ttcgacattg gctttccaga agccttggcg caaggggatg atgtccactt cgcctttgtc
     4081 gtctgtgctg tcggagaaag cctgtgcttc ggttttgtgc gttttgctgc ggtcgctggt
     4141 gtcgaagccg tcaaaggtgg cggtaacggt ggcattgggc agcggttcgc cacggaacag
     4201 aacgcggact ttgaagcgtt cgcctacgtg aatgttggcg ggattgtcca gcgggacgat
     4261 ttccaagttt tgtccgaccg gtttggtgat gatggcggtg tccgcgcttt cgtgtccgac
     4321 gttgacgatg tttttgccga acattcgggt ttgttcgcaa tagcttgcgt caggcatttc
     4381 tttgatgccc gcctgtttcc agcctgcttt gttttttgac cagaaagtag gctgatattc
     4441 ggcgatgacg aggtaactgc cgtccttaac gggacggttg cttcggtact ggtagttgta
     4501 tgtgccgcgt tgaatcatgt tttccttgcc tttttcggta accagctgca tcggtttgct
     4561 gaagatgtgc aggcggtctt tggcgatggg ttcgagttcg ggaaattcgc cgtagcccaa
     4621 gtcggcttta aggtattcgc cgccgtgcgt gtgggcggtt tcgacccaga cgcggtgggc
     4681 gtgggcggat gtggcaaata gggcggaaac ggcgagcagt gtcaatgttt tcttcatggt
     4741 gcagcctttg tctcgtgtgg gttaaagatt ttgttatgtt ataacaaaat aggtatcgtg
     4801 tgaagacgga tttgctgtct gaaaactgtc tttttgtata gtggattaac aaaaaccagt
     4861 acggcgttgc ttcgccttag ctcaaagaga acgattctct aaggtgctga agcaccaagt
     4921 gaatcggttc cgtactatct gtactgtctg cggctcgccg ccttgtcctg atttttgtta
     4981 atccactata tcgatttgaa tttttcagaa aatgaagcgg acgtttgggc ggaggcaact
     5041 tgtttgataa gatagcaata ttttaaaacg gagaaagatc atgccttatg tcaatattaa
     5101 agtaaccggc ggcaaggaag caccgactgc cgcgcaaaaa gcggaactga tcggcggcgt
     5161 aaccgaattg ctggcacgcg tgctgggcaa aaatcccgaa acaacggttg tcgtgattga
     5221 cgaagtggat accgataact ggggaatagg cggcaaaagc gtcagcgaac ggcgcaaaga
     5281 gggcaggtaa aaagcctgaa aatctcggtt tgatgcttta aattccgcgt gaaaaagagt
     5341 acattcccac ccattgccca aaatttacgg aacacatcat ggataaattt cccaagtctg
     5401 caaagctcga tcacgtctgt tacgacatac gcgggccggt tcacaaaaaa gcccttcagt
     5461 tggaagagga gggcaataaa atccttaaac tcaatatcgg caaccctgcg ccgttcggct
     5521 ttgaagcccc tgatgaaatc ttggtcgatg tcatccgcaa cctgccgact tcgcaaggct
     5581 attgcgattc taaagggctg tattccgccc gcaaagccat tgttcactac tatcagacca
     5641 aaggtttgcg cgatattacg gtaaacgatg tctatatcgg caacggcgtg tccgagctga
     5701 ttacgatgtc tatgcaggca ttgctcaacg acggcgacga aatcctgatt cccgcgcccg
     5761 actacccttt gtggacggcg gcggcaacgc ttgcgggcgg tacggtacgc cattatctgt
     5821 gcgacgaaga aaacggctgg ttccccaacc ttgccgatat ggaagccaaa atcacgccca
     5881 aaaccaaagc catcgtcgtc atcaatccca ataatccgac aggcgcggtg tacagcaggg
     5941 aaatcctgtt ggaaatcgcc gaactggcgc gcaagcacgg tttgattatt ttcgccgacg
     6001 agatttacga taaaatcctt tatgacggcg cggttcacca ccacatcgcc gcgcttgccc
     6061 ccgacctttt gacggtaacg ttcaacggtt tgtccaaagc ctaccgcgtc gccggcttcc
     6121 gccaaggctg gatggtgctc aacgggccga aacatcatgc aaaaggttac atcgagggtt
     6181 tggatatgct ctcgtctatg cgcctgtgtg ccaatacgcc gatgcagcac gcgattcaga
     6241 cggcattggg cggctatcag agcatcaacg aattcatttt gcccggcgga cggcttttgg
     6301 aacagcgtaa cagggcgtgg gaattggtca atcagatacc cggcgtatcc tgcgtcaaac
     6361 cgatgggcgc gatgtatatg ttcccaaaaa tcgataccga aatgtaccgt atccacgatg
     6421 acatgaaatt cgtttacgat ttgctggtgc gcgaaaaagt cttgctggta cagggaacgg
     6481 ggtttaattg gattaaacct gaccatttcc gcattgtcac gctgccttac gtccatcaga
     6541 ttgaagaggc gatgggcagg ttggcaagat tcctgcaaac ctaccgccaa taaggggacg
     6601 gtttgtctgc cgaggataaa aaatgccgtc tgaaacggag attcccgttt cagacggcat
     6661 tttcaacagc aggaacgaat caggcaaatt tcagtctgtc gccgtcggct tctaccctga
     6721 tttcgctttc gggcgcatag tttccggcaa gcagggcttt tgccagcggg ttttcgattt
     6781 ccgactggat ggcgcgtttg agcggacgtg cgccgtaaat cgggtcgaaa ccggctttgg
     6841 cgatgatgtc cagagcggca tcggaaacag tcaggcggag gttttgtttt tccaaacgtt
     6901 tttccaagcc tttgagctgg attttcgcaa tgttgcggat attatcctga tccagtccgt
     6961 ggaacacgac cacttcgtcg atgcggttga tcatttcagg acggaaatgc tctttcacat
     7021 cctccatcac aacttctttc acggcttcgt agtcctgcgt gcccatttgt tggatgtgct
     7081 ggctgccaat gttggaagtc atcacaatca cggtgttttt aaaatctacc gtcctgcctt
     7141 gtccgtcggt caaacgaccg tcatccaaaa cttgcagcag gatattgaac acgtcgggat
     7201 gggctttttc cacttcgtcc aaaagaatca cgctgtacgg tttgcggcgg acttgctcag
     7261 tcaggtagcc gccttcttcg tagccgacat agcccggagg cgcgccgatt aagcgggcaa
     7321 cggcgtgttt ttccatatat tcggacatat cgatacgaat cagatgatct tcactgtcaa
     7381 acaggaagcc tgccaatgcc ttacacaatt cggtcttacc cacgccggtc gggcctaaga
     7441 acaggaagct gccgtaaggt ttgttcggat cggcaagacc ggaacggctg cggcggatag
     7501 cgtcggacac ggcacgcacg gcttcatctt gaccgaccac gcggcggtgc aatacttctt
     7561 ccatcttcag cagtttgtcg cgttcgcctt ccatcatttt ggacacggga ataccggtca
     7621 tacgggaaac aacttctgcg atttcctccg cgccgacatt attacgcaag agtttgtttg
     7681 ccggttttgt gctgtccgta tctgcccgtt cggcggctgc acgctgtttt tccaaatgct
     7741 ccaaatcttc atacatcaat tttgaagcca gtgccaaatc gccttgccgt tttgcctgtt
     7801 cgattttaat tttgacttcg tcaatttgtt tcttaatatt agcagcaccg tctgaaattg
     7861 ctttttcggc tttccagatt tcgtctaaat cggcgtattc tttttgcaga ccgttgattt
     7921 cctcgtctat cagttccaaa cgttttttgc tggcatcgtc tttttctttt tcaacgtgtg
     7981 ccttttccat ccgaagctga atcagacggc ggtcgatttt gtccattgct tccggcttgg
     8041 tttctttttc catcttgaca cggctggcgg cttcatcaat caaatcaatc gctttgtcgg
     8101 gcaggaagcg gtcggtgatg tagcggtcgc tcaactccgc tgcggcaacg atagcagggt
     8161 cggtaatatc gataccgtgg tggatttcat aacgctcctg caaaccgcgc aagatggcga
     8221 tggtgtcttc cacgctgggc tcgccgacca atactttttg gaagcggcgt tcgagtgccg
     8281 cgtctttttc gatgtattgg cggtattcgt ccaaggtggt cgcgccgata cagtgcagtt
     8341 cgccccgcgc caaggccggt ttcagcatat tgcccgcgtc catcgcgccg tcggttttgc
     8401 ccgcgccgac caaagtatgg atttcatcaa tgaaaatcag agtgttgccg tcgtctttcg
     8461 ccaaatcgtt caacacgcct ttcaagcgtt cttcaaattc gccacggtat ttcgcgccgg
     8521 caatcaatgc cgccaagtcc agaaccaaaa ggcgtttgtt gcgcagggat tcgggtactt
     8581 cgccgttgac gatgcgttgc gccaagcctt cgacaatggc agttttaccc acgcccggtt
     8641 cgccaatcag cacggggttg tttttggtgc ggcgttgcaa tacctgaatt gcacggcgga
     8701 tttcgtcgtc acgaccgata acggggtcga gcttaccgtc gcgggcgcgt tgggtcaaat
     8761 cgagcgtata ttttttcagc gcatcgcgtt ggtcttcggc attggcatcg ttcacgtttt
     8821 gtcctcctcg taccgcatcg attgcggcat taatgttttg ttcggtcgcg ccggcttctt
     8881 tcaaaatttt gccggttgca tcgttctgct gcaccaaggc gagcaggaaa agttcgctgg
     8941 cgatataggc atcgccgcgt ttggttgctg ctttgtccat caggttcaac accgcctgca
     9001 attcgcggct gggcataatg tcgccgccct gtccggatac tttcggcagg ctgttcaaat
     9061 gctgctgcaa acgctgtttc acctgcggca cgttcacgcc cgcatgagcc aagagcgcgg
     9121 cagcaccgct gttttggtcg tcaagcaggg ctttcagcac aaagcccgct tccagatagc
     9181 tgccgtccgc agccaacgcc aaactctgag cttctgcaag ggcctgttgg aatttggcgg
     9241 ttaatttgtc gtatcgcatt tttgtttcct tttcaaaatg tccgctgtcg aagcctatat
     9301 gtgcataatt gtggataact caagttctgt tttctgtttt tctatattta attcgatata
     9361 tcattgaatt taaagtatat aaaaatgtat aataatgtgt ataactatat cttcttaata
     9421 tggaaaagtc tgttgtcggc tggatgtagg tggcaaatcg ggtataatcg gcgcatcttt
     9481 ttccctttca gacggcattg atgccgcaag gacattttta tgagcaaaaa acgagttctg
     9541 accggcgtaa ccaccaccgg catcccgcat ctgggcaact acgtcggtgc tatccgcccc
     9601 gccgtccgcg cggcgcaaaa ccctgatacc gaatccttcc tcttcctcgc cgattaccac
     9661 ggtatcatca aatgccacga gccggagatg attcaccaat ccacccaagc cgttgccgcc
     9721 acttggcttg cctgcggact cgaccccgag cgcaccacct tctaccgcca aagcgacatt
     9781 cccgaagtga tggaattgaa ctggattctg acctgcatca ccgccaaggg tttgatgaac
     9841 cgcgcccacg cctacaaagc cgccgtgcag gcaaatgcgg aaaacgggca ggaagacccc
     9901 gatttcggcg tggaaatggg tttgttcagt tatccgattc tgatgactgc cgatattctg
     9961 atgttcaacg ccaacgaagt ccccgtcggg cgcgaccaaa tccaacacgt cgaaatggcg
    10021 cgcgacatcg ccggccgctt caatcaccgc ttccgagaac tcttcaccct gcccgaagtg
    10081 aaaatcgacg aaaacgtcga actcttggtc ggtttggacg gacgcaaaat gtccaaatcc
    10141 tacggcaaca ccattccgct ttgggaaaac gacaaaaaaa cccaaaaatc ggtcaacaaa
    10201 atcatcacca atatgaaaga gccgggcgag ccgaaacagc ccgacgaaag cccattgttt
    10261 gaaatctaca aagccttctc cacgccgtct gaaacggtgg aatttacgaa aatgcttgcc
    10321 gacggcctgg cttggggcga ggcaaaaaaa cttttggcgg cgaaaatcaa cgccgaactc
    10381 gccgaaccgc gcgaacgcta caacgagctg accgccgacc cttcgcaaat cgaagagatt
    10441 ttacaggcag gtgcgcaaaa agcgcgtaaa gaagcacgcg aattgttgga caaagtacgc
    10501 gatgcggtcg gcatccgccc gttgaaataa acccgatgcc gtccgaacct cttaaaggct
    10561 tgccggaaca aaacgtcgtc cggctgaccg gcaagcatcc caacgacttg gaagccgtcg
    10621 tcggcaaatg tatggaaacc gacggaaagg gcgcgccttc gggctgggcg gcaaacggcg
    10681 tgtgccatac cttgtttgcc aaactggtgg gcaatatcgc cgaagacggc ggcaaactga
    10741 cggattacct gatttcgcat tccgccctgc aaccctatca ggcaggcaaa agcggctatg
    10801 ccgccgtgca gaacggacgc tatgtgctgg aaatcgacag cgaaggggcg ttttatttcc
    10861 gccgccgcca ttattgaggt attcggacat cccggaatat atttgggttt ttcaaaccct
    10921 gcgggaaaaa agtccgcacc gtcgggaaac tcaaaaggag ggggatatgt gttacaattt
    10981 tccgaactgt tttcataaaa tagttttcgg acgtgtttca atatggcatt gatgccgcct
    11041 tattgttcga gaaaaaaaac ctttatattt aaatataatg ggttttaact aaacgggaaa
    11101 ccgttttctc tccggccgat gggcaaaatc agccgattga tggaacacgg tccgattttt
    11161 aagcaaaacc ttaatcaaca actcaagaag gataagacat gaaaaaatta ttgattgccg
    11221 caatgatggc ggctgccttg gcagcttgtt cgcaagaagc caaacaggag gttaaggaag
    11281 cggttcaagc cgttgagtcc gatgttaaag acactgcggc ttctgccgcc gagtctgccg
    11341 cttctgccgt cgaagaagcg aaagaccaag tcaaagatgc tgcggctgat gcaaaggcaa
    11401 gtgccgagga agctgtaact gaagccaaag aagctgtaac tgaagcagct aaagatactt
    11461 tgaacaaagc tgccgacgcg actcaggaag cggcagacaa aatgaaagat gccgccaaat
    11521 aatttgttgc cttggcaaaa atgatgggat gccgcctgcc ggcaacccaa acgaaaccgc
    11581 ctgaagattt tcaggcggtt tttgggttat gtgccccttg ttttttacgc ctgcatgacc
    11641 gttccgagca gatgtgccgc gcatatcggg atgttgcgga caggcaaatg ccgtctggac
    11701 agggtttgga cggcatttgt tccgtaaggt tcagacggcc tcgactttaa acggcatatt
    11761 gattttttgc cattggacgc tttcatattc caatgcgtcg gcaatcaggg ggtggcgttc
    11821 cagccattcc ctgtcaatac gcaggatgaa gccgcagctt tccgtatccg tgcgcaactg
    11881 catgtttttc gggaaagaca ggtcttggcg cgaacggcag aacagtgcgg caaggcgcag
    11941 cgacaaaacg gcataccaca acatttcgtt ggtgccgatg atgccgctca tttttttcat
    12001 atcgccgcga tgaccgatga ccagttgggc aagtatggtc tgttctttgc gtgagaaacc
    12061 cggcatatcg gcgttttcga ggatgtaggc ggaatgcttg tgatagccgg tgtgggcgat
    12121 gtccaaaccg atttcgtgca gcgcggcggc gcgtccgaga tactgttgcc acaaggcaag
    12181 ctcttgaacc gtaacatttt tagcgtggca gaggctgtcc ataaaggttt gcgcggtctc
    12241 ggcggtgcgt ttcgcctgat tgaggctgac gtggtagcgg tgttggaact cggcaaccgt
    12301 ttgtccgcgc atatcttcgt ttaaaccgcg cccgatcaaa tcgtaaaaca cgccgtcgcg
    12361 cagggcggct tcggttacgg tcatcctgtc gagtttcatt tcttcaaacg ccgccatcat
    12421 cacggcaagt ccgccggcaa aaacttcgat gcgttccggt ttcaggtttt caaatttggc
    12481 ctttttgacc gaaccggctt cgatgatgcg ttcggcgagg gcgcgcatgc ctttgtaggt
    12541 aatgtccgcc tcttggggca tttcggcggc aagcacgtcg cggatggatt ttgccgaacc
    12601 cgatgtgccg acggcgaaat cccaaccttc gcgcctcata tttttgctga tgcgctggat
    12661 ttcgttgcgg gcggcggaaa tggcagattg gaagtctttg gcggtgattt tgttttggaa
    12721 gaagcgcagg ctgtaggtta cgcagcccaa gggcaggctt tcagtaatgt cgggattcag
    12781 cgtcgagccg atgacaaatt ctgtcgaacc gccgccgatg tcgataacca gcattttgcc
    12841 gccgcccggg gggagggtgt ggatcacgcc ggtataaatc agccgcgcct cttcgcgccc
    12901 ggcgatgatt tcgatgggga aacccagtgc cgcttcggcc ttgggaagga aatctgcgat
    12961 gtttttggcg acgcggaatg tattggttgc cacggcgcgc acctgttcag ggcggaagcc
    13021 gcgcaggcgt tcgccgaatt ttgccaggca gtccaaagcc tgttcttggg aagcggcact
    13081 caggtttttc tgttcgtcca gaccggcggc gaagcgcacc atctgtttga acgaatcgat
    13141 aacttttaat tgtccgttgt tgttttcgca aatctggagg cggaaactgt tggaacccaa
    13201 atcgacggag gcgaggacgt ttgcgggatg ggtggtcatg gtggataccg gtgggggaaa
    13261 aacgcaatgt tactctgacg gcgcaggcgt tgacaataaa tgatgcggcg gtttttgatt
    13321 ctgcccacgg atgttgccga cggcattttt gcgcttattt gaaatccttt tccacgctca
    13381 tgaaaatctg cgtgtttttg cgtgtgtaaa aacttttcat attgctgtcg attttcagat
    13441 agcggaaatt gagttgcggc gtaaagccct tccaagagat tttgtcgtgc cacaacgaca
    13501 ggtttgcctg atattcgtgg tctttgcgcg ggaagcggta cacaatggtc ccgggtgcgt
    13561 caaacatcct gcgggtatag cgcaggtttg cccgcagacc caagcccgcc gtcgaacgtt
    13621 ttgactgcgc cgacacgcaa acccttgcgg acggaagcct gttccgcctc tttcgtcatg
    13681 ttgtgcgacc agtccgcacc gccgtaaagc agccagtctt tcggcgcgga atacatcagc
    13741 gtcgcgcccg ccagcggcat atggctgtcg tatcgggcgg cggtgcggtc ttcctgataa
    13801 cgcttccaca tattgcccac gttcagcgtc agccgccagc gttcgctcaa gcgtcgggag
    13861 aaatcggcat tgaagccgcc gacgaaattg tatcggctgc cgcctaagag gttttgcccg
    13921 ataaacggca cgatgccgaa cgagcgcgtt accgaacgat ttttatagcc gagcgacagg
    13981 cgcaggcact gttcgctgaa atctttgtta tcccaataat gcacgccgcc gccgctgatg
    14041 ccgccgtaga ggaaatgatg cccgcccgca ttgatttcgc gcgacacgcc taagccctag
    14101 cgcaaaccgt gtgccttttg cggcaggctg tcggcggttt tcgtccagct tctgcccgca
    14161 aattcaatcg tttttttgga cgaagcgttg tttatagcgg attaacaaaa atcaggacaa
    14221 ggcgacgaag ctgcagacag tacagatagt acggaaccga ttcacttggt gcttcagcac
    14281 cttagagaat cgttctctt
//
LOCUS       DBBZXW010000045        14188 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.045, whole genome shotgun sequence.
ACCESSION   DBBZXW010000045 DBBZXW010000000
VERSION     DBBZXW010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14188
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.045"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..220)
                     /locus_tag="ACJJD2_001189"
     CDS             complement(<1..220)
                     /locus_tag="ACJJD2_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HGG7579735.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLSACLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYS"
     gene            414..1140
                     /locus_tag="ACJJD2_001190"
                     /pseudo
     CDS             414..1140
                     /locus_tag="ACJJD2_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            1209..2747
                     /gene="lnt"
                     /locus_tag="ACJJD2_001191"
     CDS             1209..2747
                     /gene="lnt"
                     /locus_tag="ACJJD2_001191"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HGG7579736.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            3011..3874
                     /gene="rpoH"
                     /locus_tag="ACJJD2_001192"
     CDS             3011..3874
                     /gene="rpoH"
                     /locus_tag="ACJJD2_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HGG7579737.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYKPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            4358..5242
                     /locus_tag="ACJJD2_001193"
     CDS             4358..5242
                     /locus_tag="ACJJD2_001193"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HGG7579738.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDAENGNQSLELNRDLVGQLAEINKDLR
                     KHYDLAKLGVADILRFPGVLASQRENADALAKVIADLTDSALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(5326..5841)
                     /locus_tag="ACJJD2_001194"
     CDS             complement(5326..5841)
                     /locus_tag="ACJJD2_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG7579739.1"
                     /translation="MMILKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(5916..6335)
                     /locus_tag="ACJJD2_001195"
     CDS             complement(5916..6335)
                     /locus_tag="ACJJD2_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579740.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(6456..7454)
                     /gene="holA"
                     /locus_tag="ACJJD2_001196"
     CDS             complement(6456..7454)
                     /gene="holA"
                     /locus_tag="ACJJD2_001196"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HGG7579741.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEINKLGLLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVPRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            complement(7456..7935)
                     /gene="lptE"
                     /locus_tag="ACJJD2_001197"
     CDS             complement(7456..7935)
                     /gene="lptE"
                     /locus_tag="ACJJD2_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HGG7579742.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            complement(7987..8766)
                     /gene="pgeF"
                     /locus_tag="ACJJD2_001198"
     CDS             complement(7987..8766)
                     /gene="pgeF"
                     /locus_tag="ACJJD2_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HGG7579743.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAESLGGTPNADAS
                     VDDTGKAVCAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            8933..9046
                     /locus_tag="ACJJD2_001199"
                     /pseudo
     CDS             8933..9046
                     /locus_tag="ACJJD2_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9325..10272
                     /locus_tag="ACJJD2_001200"
     CDS             9325..10272
                     /locus_tag="ACJJD2_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HGG7579744.1"
                     /translation="MNILSKISSFIGKTFSLWVALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(10425..11549)
                     /gene="rluD"
                     /locus_tag="ACJJD2_001201"
     CDS             complement(10425..11549)
                     /gene="rluD"
                     /locus_tag="ACJJD2_001201"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HGG7579745.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLSAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            11548..12351
                     /locus_tag="ACJJD2_001202"
     CDS             11548..12351
                     /locus_tag="ACJJD2_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HGG7579746.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(12409..>14188)
                     /locus_tag="ACJJD2_001203"
     CDS             complement(12409..>14188)
                     /locus_tag="ACJJD2_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HGG7579747.1"
                     /translation="REAWALSNGIGGAGTVGADRVLLHGGSGWGIAVWRSRISRNWQQ
                     ADADGGLSDGIGLMRALSVGEQSALRPELWQAFRPLGLTHLVSISGLHVTMVAVMFAW
                     LAKRLLACSPRLPARPRAWVLAAGCAGALFYALLAGFSVPTQRSVLMLAAFAWAWRRG
                     RLSAWATWWQALAAVLLFDPSAVLGVGTWLSFGLVAALIWACSGRLHEGKRQTALRGQ
                     WAASVLSLVLLGYLFASLPLISPLVNAVAIPWFSWVLTPLALLGSVVPFAPLQQLGAF
                     LAEYTLRFLVWLADVSPEFAVASAPLPLLVLAVCAALLLLLPRGLGLRPWAVLLLAGF
                     VFYRSPGVPENEVAVTVWDAGQGLSVSVQTANHHLLFDTGTAAAAQMGIVPSLNASGI
                     RYLDYLVLSHHDSDHDGGFQAVGKIPNGGIYAGQPEFYEGARHCAEQRWQWDGVDFEF
                     LMPSERKNIDDNGKSCVLRVVAGGAALLVTGDLDTKGEESLVGKYGGNLYSQVLVLGH
                     HGSNTSSSGVFLNAVSPEYAVASSGYANAYKHPTEAVQNRVRAHGIKLLRTDLSGALQ
                     FGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         3357 a         4236 c         3521 g         3074 t
ORIGIN      
        1 ggctgtaatt gaatttccac aaaccgccga acactgccgg cggacgcgcg accagcatca
       61 ggaacgccgc aatcgccaag gcttccgccg ccccgtccaa cacgccggcg ggagaaacca
      121 gcagcaaagg cattcccaaa catgcggaca aagtggtcga aaccacgctc aggaacaaca
      181 gtgcgccacc cggcaggaac agactgccca tccaatccac gctaacgatt ctcccttaaa
      241 attcattaaa ttaaaatcga aagactgtaa cacggcattt ttttcacgaa actttacttc
      301 acgtccgcca ccgccttcag acggcatttt cctgtttcat gccgcctgaa accgcccaaa
      361 tccgcgttct cctatataat gtcggacttt gcgccgcatt tcaggattct ttaatggcat
      421 ttgcctcact atttaccctg ccggacgaca tcaccgccgt tttggacgat gttgccctga
      481 tgaccaaagc cgccgcaaag aaaaccgccg gcatggtcgg cgacgatttg gcacccaatg
      541 ccaaccgggt tacgggcgta tcggcagaac gcgagttgcc gattgtttgg tcgatggcga
      601 aaggttcttt ttccaacaag ccggttttgg tgcctgcggc cctgctgctt tccgccttcc
      661 tgccgcaact cattacgccg cttttgacgg caggcggcat ttatctgtgc tttgaaggcg
      721 tagaaaagct gctgcacaag tttctgcacc gacatgacgc gcatgctcgt aatggcggca
      781 atcggcatcg gcatgactgt tttggtgtac ggaatcgttg ccgtcatcgt caaactcgac
      841 gacttaggca tgctgctgat gcgccgccca caaacctttt cgcgcagttt ggggcaaatg
      901 ctgactgcct ttatgccttg ctttatgcgc ggtttgagcg tggtcggcac gcttgccatg
      961 tttcttatcg gcggcgtact ggtcgcccac aacctcggcc ttctgcacga tttcctgcac
     1021 gcgcaacact gggacgctgg ctgggcggag tacttcgcca acctcgttgt cgggctgctt
     1081 tccggttcga ttgcctgcgc ccccgccttg ccgctgatga atcgtttcgg caggcattga
     1141 tttctttttc aaataccgat gccgtttgaa agatgttcag acggtatctt ccgaacagac
     1201 agatgaatat ggtttccaaa ctggacaaat actggcagca ccccgccctc tactggcctt
     1261 tgctcatcct ttttgccgcc gccaccccct ttaccttcgc accctactac cacttttggc
     1321 tgatgccctt gattttcggt gccttcgtcc gcctcatcga actgcgtccg cgttttgctg
     1381 tctcttccgc ctacctgttc ggcctgaccg catacacgac acagttctac tggatacaca
     1441 ccgccctgca cgacgtttcc ggcctgcccg acctctatgc cgtaccgctg accttcctac
     1501 tccccgccta ccttgccctt tatccggcac tgtgtttctg gctgtggaaa aaatttaccc
     1561 tgcctcgggg cataaaaatc ggtttggtac tgcccatcct gtggacgctg accgagtttg
     1621 cccgcgagcg tttcctgacc ggattcggct ggggcgcaat cggctactcc caaatcaccc
     1681 cggacagccc gctcgccggc tttgccccat tgggcggcat ccacatggtt acactggcaa
     1741 ccgcctttct cggtgtctgg ctggttttgg cgagtgataa caccgcacgt tcgggcaaac
     1801 gcctgcttcc gattatcctg attgccgccc tgcttgccgc aggctacacc gcccgacaaa
     1861 ccgacttcac ccgccccgac ggcagccgca gcaccgtcgc cctgcttcaa ggcaacatcg
     1921 accaaaccct caaatggcgt gaagaccaag tcatcccgac catacagaaa tattacgaac
     1981 aggtcggcaa aaccactgcc gacatcgtca tcctgcccga aaccgccatc cccgttatgc
     2041 gccaaaacct gccggaaaac atactggcaa aatttgccga acaggcgcaa aacaacggca
     2101 gcgcgctcgc cgtcggcatc agccaataca cttcggacgg caacggttac gaaaacgccg
     2161 tcatcaacct gaccggttat caggaaaaca atcaggacgg catcccctac tacgccaaaa
     2221 accacctcgt ccccttcggc gaatacaaac cgctgccctt cctgaccacg ccgctttaca
     2281 aaatgatgaa tatgcccctt tccgacttcc gcaaaggcgg cggtaagcaa tccgccctgc
     2341 tgatgaaaaa ccaaaaaatc gccttcaaca tctgttacga agacggattc ggcgacgaac
     2401 tgattgccgc cgccaaagat gccaccctgc ttgccaatgc cagcaatatg gcgtggtacg
     2461 gaaaatccaa cgccatgtac cagcacctcc aacaatcgca ggcacgggct atggaactcg
     2521 gacgctatat ggtccgtgcc accaacaccg gcgcaaccgc catcatctcc cccaaaggca
     2581 acatcatcgc ccaagcccaa cccgatacgg aaaccgtatt ggaaggacac atcaaaggct
     2641 atgtcggcga aacgccctat atgaaaaccg gcagttcatg gtggttgatg ggcatattga
     2701 ccctagccgc actgattctt ttcatcttcc gaaacaaaga acactgatac ctgcacagcc
     2761 cgtccggacg ggctgtcttt tttcaaaccg gccgtttaca tacaactacg tatgtaatat
     2821 aattctgaaa tcgaattgag tcatcaggtt tacaaaatca atcaaacctg ccttacaaaa
     2881 ttttcctgtc tttcaaacct tagcgcatat ctcctgccaa acatacaaaa tacaagccaa
     2941 gcagtgatat actgcatccc aacacagcaa accgccgata cgcagtttca gccgaaagga
     3001 aatgccccaa atgaataacg ctttcgcatt acccgccatc caaagcggca acggcagcct
     3061 cgaacaatac atccacaccg tcaacagcat cccgatgctg tcccaggaag aagaaacccg
     3121 cctcgccgaa cgccggataa agggcgacct caacgccgcc aaacaactca tcctgtccca
     3181 cctgcgcgtc gtcgtttcca tcgcgcgcgg ctatgacggc tacgggctga atcaggcaga
     3241 cctgattcag gaaggcaata tcggactgat gaaggcggtc aaacgctaca agcccggtag
     3301 aggcgcgcgt ctgttttcat ttgccgtaca ctggattaaa gccgaaatcc acgagtttat
     3361 tttgagaaac tggcgtttgg ttcgcgttgc caccaccaaa ccgcaacgca agctgttttt
     3421 caatttacgc agtatgcgta aaaacctcaa cgccctgtct cccaaagagg cacaagacat
     3481 cgccgacgat ttgggtgtca aactttccga agttctggaa atggaacagc gcatgacggg
     3541 acacgacatc gccatcatgg cagacaacag cgacgacgag gacagtttcg cccccatcga
     3601 ctggcttgcc gaccacgatt ccgaaccgag ccggcaacta tcgaaacagg cgcattacgc
     3661 cctgcaaaca gaaggtttac aaaacgcttt ggcgcaactg gatgacagga gccgccgtat
     3721 tgtggaaagc cgctggcttc aagacgacgg cgggctgacg ctgcaccagc ttgctgcaga
     3781 atacggcgtc tctgccgagc gcatccgcca gattgaagca aaagccatgc agaaactgcg
     3841 tggtttcctg accgaagaag ccgaagcggt ttgaaatata cgcaataaaa tacccgacaa
     3901 attgttttgt cgggtatttt atttggtaaa catcaatgcg gtttgtgcgt cgtgctgtac
     3961 acgattttat ccgtccacgc cgttgcaatt gccgaaatca aaaagcagac atgcaccaga
     4021 cactgccgca tcagctgctt ttccgacaga ttggcggaat tgatatagtg gattaacaaa
     4081 aatcaggaca aggcggcgaa gccgcagaca gtacaaatcg tacggaaccg attcacttgg
     4141 tgcttcagca ccttagagaa tcgttctctt tgagctaagg cgaggcaacg ccgtactggt
     4201 cttggttaat ccactataca tttcccttcc ttgcagcaac aaaagcgcgt gattccaatc
     4261 tgccgctgca aaatcttcaa tttttcacac ccgaaaacgc ttgccgccat acagatgtga
     4321 tatattgatt ccattttaac gggcttcgga gaacgacatg agcagcggaa atatccacat
     4381 ccacagcatg accggatttg ccaacgcagc ggcagagtgc ggcagcaaac gcatcaatct
     4441 cgacctgcgt gcggtcaacc accgttttct agatattcaa atcaggatgc ccgacgattt
     4501 gcgctatttg gaaagcggta tccgcgagaa aatttcatcc catatcgcac gcggcaaagt
     4561 cgaatgcaaa atccaaattc aagatgcgga aaacggcaat cagtctttgg aactgaatcg
     4621 cgatctggtc ggacagcttg ccgaaatcaa caaagacctc cgcaagcatt atgatttggc
     4681 aaaactgggc gttgccgata ttttgcgctt tccgggcgta ttggcaagtc aaagggaaaa
     4741 tgcggacgca ttggcaaagg ttattgccga tttgaccgat tcggcactga aggactttac
     4801 cgccgcacgc cggcgcgaag ggaaaaaatt gggcgagcac ctgttacaac gcctcgaaag
     4861 catggaagaa atcatagatg cattaagcga actctttcct accctgttgg aaacacataa
     4921 agaaaaaatc cgcgcccgcc ttgccgaagc ggtcggcagc atcgacaacg accgcctgca
     4981 acaggaattt gccctcttta tccaaaaatc cgacatcgac gaagagttca gccgcctacg
     5041 cacccacatt gccgaagtgc gccgtatcgt taccgaacac aaaggcagca gcggcaaacg
     5101 gctggacttc ctgatgcagg aattaaaccg cgaagccaac actttgggca gcaaatccat
     5161 cgctaccgaa tgcacccaag cctcggtcga gctgaaagtc ctgatcgaac agatgcgcga
     5221 acaggtgcag aatatcgaat aatcggtttc cccgataagc aaatgccgtc tgaaagccct
     5281 ttcagacggc attttttcag tttgaaacct ttgcggtata aaggcttaag gctttccttt
     5341 gaccgccacc aatcttgttc ctgcaagaaa atcatacaga aactgccgat cgggattcag
     5401 cagggcgaac ccccacggta aaatcagcca aatcaatgcc gcgccggccg cgcccttggg
     5461 cggaatgccg aggaagtggc gcaatccggc ataagcaagc ataggaatga agacgatgaa
     5521 tatgcacgcc caaataaagc gcaggcggag taagtgtaga gacggctgta tgccgttaag
     5581 gtcgcacaaa ccgattttcc acgtcctcat cgccaaggtc tgtccctgcc cgtgccagtt
     5641 ggcacggaaa taaagccacc atgatcccat tatcaggata ctcgttacca atgcagaaac
     5701 cgcaatagaa acgggattca gaaaaatggc ggcaataccg gcaaacaatg ctgccaaaca
     5761 ggttgccgca ccgaccagca gcatttcgta cagcatggcg gcaaagcggc gtttgagcgg
     5821 ggcggttttc agtatcatca tcttttcaat cggaatatgc cgtctgaaac gccaacaggc
     5881 ttcagacggc attcatgcag atatgtctca tgtggttaac ggtgcggacg tttctgaccg
     5941 cgcgactgtt ttgccgccat ttgattgatt tcctgacgtg tcgggcgttt tttgaacata
     6001 gcgtgcgcct cgtccaccga acatttttgc gacaggcaga tcagggtaat cgcatctttc
     6061 tggtgttgtc cgccgctgtg gtacatacgg cgcaggtttg cctcgttgat tctgcctttt
     6121 tcgggatcga tgtcgaattt tttcaggcgt tcgataaact ggcgttgctg tcggcgggat
     6181 gtccaaacaa agccgcccgc agcggcggcg acgatgacgg cggcaagcag gatggcaagc
     6241 ggccaggaat cgacaatcaa tacgataatg aggcttaaaa cggcggtggt cagtaaaatc
     6301 aggccgccca agcgcagttt ggtcttattg tccatagggt tgatgttcct ttattgaggt
     6361 ggtcgtgccg tctgaaatgt tttcggacgg attggtgaat acttttcagg attaacggta
     6421 ttttacagta ttttcggatt ttagggatta ccgctttatt ccgccagcga cacgacaagc
     6481 cgtttgaata ccgtccatgc gtcgccgtct tccgcacctt tgatgattcg gtcgatttgg
     6541 gcgcaggttt tgagcgcgtc aagcaggcgg acgacggaaa tccgcttgac cgcaagcggc
     6601 gcgagcgtct gcttttcacc ccaaagtctg agactgttgc ggacggattg gatgctctgc
     6661 ccctgcttca gggcggcggc aagccggatc agcgtccgca cgtcttcggc aaccgcccac
     6721 agaagcagta ccggttcttc gccttcttcc cgcaatccgt ccaagagcct gcatacgcgc
     6781 gggacatcgc ccttcatcca cgcgcctgcc agttggaacg cgtcgaagcg ggcgacgttg
     6841 gcaacggcgg tttgcgcctc atcgatattg acggtatgcc ctttcggata cagcagcccg
     6901 agcttgttga tttcctgacg tgccgccaac agattgcctt ccacgcgctc agcaaacagt
     6961 gccaatgcgt ctgccccgat acccaaaccg attttgtcca gccgtccgcg tatccattgg
     7021 ggcaaagccg ccgcgccgac cggtttggct tcccacactt ccccctttgc cgccaatgcg
     7081 gcaaaccatt tggactggag ctgggttttc tccagtttgg gcagtaaaac cagcgttacc
     7141 gtatcttccg gcaggcgggc ggcaaaatcc tgcaacgcct cgccgccggt tttgccgggc
     7201 ttgccgttag ggatatgcag ttccaacagc ttcaaatcgg caaacagacc cgcactgcct
     7261 gcggtttgca gcagctcgtt ccaatcgaaa gcattgtctg ccgtataaac ttcccgatta
     7321 aggtaacctt gtttcttcgc cgccgccctc aatgcgtcca atgcctcgat acgcaacagt
     7381 tcttcctcgc cgtggatgac gtacaggggt ttcaaaggcg cgtccgtatc aatgcgtccg
     7441 atatgtgccg ccacgtcatt ccgccttcag aaaggtcagg cggcggacaa tctgttcggc
     7501 ggcatcctgc cgcatttccg cccacaatgc cgcttcctct tcctgtttgc ccaagatctc
     7561 gttgtcggca taagcaagga cgcggcggac ggacacggtc atcggtttgc cgaccggctc
     7621 gccgcgtttc aatacctgcg cttcaaccgt caatatcaaa agatattcgt tgatgactgc
     7681 cgcacgggta acggtgtagg tttccttgtt ttgggaaacg ctgtctatac gcagggtcat
     7741 ctgcgcgccg gcagcatcgt ccaccctgcc cgaagcctga tacagcgcgg tttccaaagg
     7801 aaactgcaat gcctgtccgc cttcgatgtg ccagctccgg taggtcagcg gcggagaaat
     7861 gccgtctgca cctttcaggt ggaaaccgca cgcgcccagc atcagcactg cggcagtaag
     7921 aaacagtttg ttcatggctt gcctttctca aaagcacaaa gtcggtagat tatatcagcg
     7981 gcgtgttcag acggcattgc cgtccagcca aatcaggctc gccatacgcc ctgtcgctcc
     8041 gtcgcggcgg taggaaaaga aagtgtcccg ttccaaaacc gtacaatgcg tgccgccata
     8101 tacgccgccc acgccttcac gcttcagaat caggcgggcg agcgcgtaaa ggtcggcaag
     8161 gaatttgccg ccgcctatgc cttcaaatgc ggcggcggct tcgggcatgg gcgtgcagaa
     8221 cgcatcaaac acgtcctgtc cgacttcaaa cgcatccgca ctgatggcag ggccgagata
     8281 cgccatcatt tcgacaggcg gaaccttcat cgcagcaatg gtgttttgca atacgccgcc
     8341 cgccaaaccg cgccagcccg cgtgtgcggc ggcaaccgcc gtacctgccc tgtcgcaaaa
     8401 caaaacaggc agacagtctg cggtcatcac agcacagacg gctttacccg tgtcgtccac
     8461 ggaagcgtcc gcattgggtg taccgcctaa cgattctgca gcgttgacga cgacggtgct
     8521 gtggatttga ttgaggtagg caacgggcaa tccgacctgc tgttgcacga tttcgcggtt
     8581 gcggcgcacg gcttcgggat tgtcgccgac gtgcgtaccg aggttcaaac tctgatacgc
     8641 accttggctc acgccgccgt tgcgcgtggt aatcagggtt ttcacattgg cgggcgcggg
     8701 ccaatcggcg gtcaggaagt ttttgccttt cggggcgaga tttagggttt ctgtgatggt
     8761 tttcattgga tattggaata ggtgtgtggc ggaaagggtt gattaactgc cttcggggca
     8821 aatggatgtt tgttttttcg tcattcccgc acaggcggga attcggagat tcgggattgt
     8881 tttcaaacgt tcgggttcgg attcttgccg gtgcgggaat gatgccctta tatatagtgg
     8941 attaaattta aatcaggaca aggcgacgaa gccgcagaca gtacaaatag tacggcaagg
     9001 cgaggcaacg ccgtactggt ttaaatttaa tccactatac tttctccgag ctttatatgt
     9061 ttcaacagag gacggcacat caagcaccgc actgcgtgtt gcccgaacga gactacccta
     9121 cgattagatt ctatcgctat aaacagacgg gtttcaaccg aaaaggaatg gggataaagt
     9181 ccatttccga catctctcgg gcgatgccgt ctgaaaacca atctccactt tcagacggca
     9241 ttgtttaggc acggtcattt tgcaaattaa ggttaaggcg tgtatgcttg ccttccctta
     9301 aaaacaaaca cgcaacgcat tattatgaat atcctcagta aaatcagcag ctttatcgga
     9361 aaaacatttt ccctctgggt cgcgctcttt gccgccgccg cttttttcgc gcccgacacc
     9421 ttcaaatggg cggggcctta tattccttgg ctgttgggca ttattatgtt cggtatgggt
     9481 ttgacgctca aaccttccga cttcgatatt ttgttcaaac atcccaaagc cgtcatcatc
     9541 ggcgtaatcg cacaattcgc cattatgccg gcaaccgcct ggctgctgtc caaactgttg
     9601 aacctgcctg ccgaaatcgc ggtcggcgtg attttggtcg gctgctgccc gggcggtacg
     9661 gcttccaatg tgatgaccta tctggcgcgc ggcaatgtgg ctttgtcggt tgccgttacg
     9721 tctgtttcca ccctgatttc cccattgctg actcccgcca tcttcctgat gcttgccggt
     9781 gaaatgctgg aaatccaagc ggccggtatg ttgatgtcca tcgtcaaaat ggttttgctc
     9841 cccattgttt tgggtttgat tgtccataag gttttgggca gtaaaaccga aaagctgacc
     9901 gatgcgctgc cgctggtttc cgttgccgcc atcgtgctga ttatcggcgc ggttgttggg
     9961 gcaagcaaag gcaagattat ggaaagcggc ctgctgattt ttgcggttgt cgtactccac
    10021 aacggcatcg gctacctgct cggcttcttt gccgccaaat ggaccggcct gccttatgat
    10081 gcacaaaaaa cgctggccat cgaagtcggt atgcaaaact cgggtctggc cgccgcgctg
    10141 gccgccgcac actttgccgc tgcgccggtc gttgccgttc cgggcgcatt gttcagcgtg
    10201 tggcacaata tctccggctc gctgctggca acttattggg cggccaaagc cggtaaacat
    10261 aaaaaaccct aaacgccttt catcataatg ccgtctgaac ggggcaaaca aaactggcgg
    10321 tttctgcccg gccccttcag acggcctttg tttgaaatcg gcggggacga ttgcccggct
    10381 gctccggttc ggctgcctgc gttcgccccg cctttcaagc cacctcactc ccttacataa
    10441 accacttcga catcgtagtc gtcttcgttc caatcgtcat cgtcgtccgc gccgaatttg
    10501 tcctgccatt cctcttcatt gctcaaagac gaatccaaac cggcttcaag acggaggaca
    10561 gacaataaat gatatatgtc gtccggaatc ggtgcctcaa acgaaacggt ttcgccgctt
    10621 tccggatggg taaaactcaa gcggtaggcg tgcaatgcct gacgcgcacc caaactttta
    10681 acggcttctt tcaccgtgtc gccgcacgga tggcgcgggt tgccgtaaac cgggtcgccg
    10741 gcaagcggat ggttggcctc acgcatatgg acgcggattt ggtgcgtcct gcctgtttcg
    10801 agcgagcatt cgatatagct gtgggcaaga tagcgttcca acactttgac gtgggtaacg
    10861 gctggtttgc cgccgaattt gacgactgcc attttcaggc ggttgtgcgg atcgcgtccg
    10921 atttgggttt cgattttacc gtcaaagggg acgatgccgt tggcgacggc gcggtagatg
    10981 cgtttgaccg tgcgttcttg aagctgcctc acgagggaat tttgcgccga cagggttttg
    11041 gcaaccacca tcagcccgct ggtttctttg tccaaacggt gtacgatgcc cgcgcgcgga
    11101 atttgggaca gctcggggca atgcgccaac aggccgttga gcagcgtccc cgtccagttg
    11161 cccgccgccg gatgcaccac cagtccggcc ggtttgttga cgacgatgac ggtatcgtct
    11221 tcgtaaacaa tatccaaagc cataggctct ggaacaaacg ccagattttc ctcactcgga
    11281 cggacggtta cacaaatttg ctcgccgcct atcattttgt ctttgggttg cgaaggttta
    11341 tcgtttacaa taaccgcgcc ttctttaatc catgatgtca ggcggctgcg cgagtagtcg
    11401 ggcagaagtt tcgccaacac cgcatccaac cgcccgccgg caagctcgag cggaacggtc
    11461 agaccgatac ggttttcagt ttcggaagct gacgcaaagt ctgaatcgtc gctataatcg
    11521 gattcattat caaaggaagt attctgcatg aaaaaaattc ttttaacggt ttcattaggt
    11581 ttggcactga gtgcctgtgc cactcaaggt acggtcgata aagatgctca gattacccaa
    11641 gattggagtg tggagaagct ctatgccgaa gcccaggacg aattgaacag cagcaattat
    11701 acgcgggctg tcaagttata cgaaatcttg gaatcgcgct tccccaccag ccgccatgcc
    11761 cggcaatccc aactggatac cgcatacgcc tattataaag acgatgaaaa agacaaggct
    11821 ctggcggcaa tcgaacgctt ccgccgcctc catccgcagc atccgaatat ggattacgcg
    11881 ctgtatctgc gcggcttggt gctgttcaac gaagaccagt ccttcttgaa caaactggcc
    11941 tcgcaagact ggtccgaccg cgacccgaaa gccaaccgcg aagcgtatca ggcctttgcg
    12001 gaactcgtcc aacgcttccc gaacagcaaa tacgccgccg atgcaaccgc acgcatggtc
    12061 aaactggtcg atgcactggg cggcaatgaa atgtcggtgg cgcgttacta catgaaacgc
    12121 ggcgcatata tcgccgccgc caaccgcgcc caaaaaatta tcggcagcta tcaaaataca
    12181 cgctatgtcg aagaatcgct cgccatattg gaacttgcct accaaaaact cggcaaaccg
    12241 cagcttgccg ccgatacgcg ccgcgtgttg gaaaccaact tcccgaaaag cccgtttttg
    12301 acgcacgcct ggcagcccga cgatatgccc tggtggcgtt actggcatta agcccatctt
    12361 cgtaatgccg tctgaagccg tttcagacgg cattttatgt ttcaaacctc attcaaacgg
    12421 ttttttctgc caatagaatt tataccctct caaacgttga gccttcacgc cgccgcgtcc
    12481 caagccgaat tgcagtgcgc ccgacaaatc ggtacgcagc agtttgatgc cgtgtgcgcg
    12541 gacacggttc tgcaccgctt cggtcggatg tttgtaggcg ttggcataac cgcttgaagc
    12601 aacggcatat tcgggcgaga cggcattgag gaacacgccc gacgaggacg tattgctgcc
    12661 gtgatgtccc aaaaccaaaa cctggctgta caggttgcct ccatacttgc cgaccaggct
    12721 ttcctcgccc ttcgtatcca aatcgcccgt taccagcagt gccgcaccgc ccgccacaac
    12781 acgcaaaaca caacttttcc cattatcatc gatgtttttg cgttcagacg gcatcaaaaa
    12841 ctcaaaatcc acgccgtccc attgccaacg ctgttccgca caatgccgcg ccccctcata
    12901 aaattccggc tgcccggcat aaatcccgcc gttcggtatc ttgccgactg cctgaaaacc
    12961 gccgtcgtgg tcgctgtcgt gatgcgacaa aaccaaataa tccaaatacc tgattcccga
    13021 cgcattcaag ctcggcacaa tccccatctg cgccgccgct gccgttccgg tgtcaaacaa
    13081 aagatgatga tttgccgtct gaaccgacac cgacaaaccc tgccccgcat cccaaaccgt
    13141 aaccgcaacc tcattttccg gcacgccggg tgaacggtaa aacacaaacc ctgccaacag
    13201 caacaccgcc cacggacgca aacccaagcc gcgcggcagc agcaacagca aagcggcaca
    13261 caccgccaac accaacagcg gcaaaggtgc ggaggcaacg gcaaactcgg gcgacacatc
    13321 ggcaagccac accaaaaacc gcaaagtata ttccgccaaa aatgccccca actgttgcaa
    13381 aggcgcaaac ggcacgaccg aacccagcaa cgccagcggc gtcaataccc aagaaaacca
    13441 cggaattgcc accgcattga ccaaagggct gattaaaggc agcgaagcaa acagataacc
    13501 gagcaaaacc agcgacaaca ccgaagccgc ccactgcccg cgcaaagcag tttgccgttt
    13561 tccctcgtgc aaacgccccg agcacgccca tatcagggcc gccaccaaac cgaaagacag
    13621 ccaagtcccc acacccaaga ccgccgacgg gtcgaacagc agcaccgccg ccaacgcctg
    13681 ccaccacgtc gcccacgccg acaatcttcc cctgcgccaa gcccacgcaa acgccgccaa
    13741 catcaaaacg ctgcgctgcg tcggcacgga aaaaccggca agcagcgcgt aaaacagcgc
    13801 gcctgcacac cccgccgcca aaacccacgc gcgcggccgg gcaggaaggc gcggggaaca
    13861 ggcaagcagc cgcttcgcca gccacgcaaa cattaccgcc accatcgtaa cgtgcaaacc
    13921 cgaaatactg accaaatgcg tcagccccaa cggccggaac gcctgccaca attcggggcg
    13981 caatgccgac tgttcgccca cgctcaacgc gcgcatcagc ccgatgccgt ctgaaagccc
    14041 gccgtccgca tccgcctgct gccaattacg gctgatgcgg ctgcgccaaa ccgcaatccc
    14101 ccaaccgctt ccgccatgca gcaaaaccct gtccgcaccg accgtccccg cgccgcctat
    14161 tccgttggat aatgcccacg cctcacgg
//
LOCUS       DBBZXW010000046        13701 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.046, whole genome shotgun sequence.
ACCESSION   DBBZXW010000046 DBBZXW010000000
VERSION     DBBZXW010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13701
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.046"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..197)
                     /locus_tag="ACJJD2_001204"
     CDS             complement(<1..197)
                     /locus_tag="ACJJD2_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503515.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HGG7579748.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGDGRGSVKNRVYAV"
     gene            complement(237..1199)
                     /gene="mafA"
                     /locus_tag="ACJJD2_001205"
     CDS             complement(237..1199)
                     /gene="mafA"
                     /locus_tag="ACJJD2_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7579749.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVETDNSHEGYGYSDEVVRQHRQGQP"
     gene            complement(1383..2102)
                     /gene="pyrH"
                     /locus_tag="ACJJD2_001206"
     CDS             complement(1383..2102)
                     /gene="pyrH"
                     /locus_tag="ACJJD2_001206"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HGG7579750.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(2321..3175)
                     /gene="tsf"
                     /locus_tag="ACJJD2_001207"
     CDS             complement(2321..3175)
                     /gene="tsf"
                     /locus_tag="ACJJD2_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HGG7579751.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(3304..4032)
                     /gene="rpsB"
                     /locus_tag="ACJJD2_001208"
     CDS             complement(3304..4032)
                     /gene="rpsB"
                     /locus_tag="ACJJD2_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HGG7579752.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAIRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(4209..4442)
                     /locus_tag="ACJJD2_001209"
     CDS             complement(4209..4442)
                     /locus_tag="ACJJD2_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579753.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFV
                     VTVRRRNRLMKQQEQAEFEQQRAQRQKDSGTKP"
     gene            4520..5101
                     /locus_tag="ACJJD2_001210"
     CDS             4520..5101
                     /locus_tag="ACJJD2_001210"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HGG7579754.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            5162..5752
                     /locus_tag="ACJJD2_001211"
     CDS             5162..5752
                     /locus_tag="ACJJD2_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HGG7579755.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
     gene            6289..7755
                     /locus_tag="ACJJD2_001212"
     CDS             6289..7755
                     /locus_tag="ACJJD2_001212"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HGG7579756.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
     gene            complement(7942..8316)
                     /locus_tag="ACJJD2_001213"
     CDS             complement(7942..8316)
                     /locus_tag="ACJJD2_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HGG7579757.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(8554..8853)
                     /locus_tag="ACJJD2_001214"
     CDS             complement(8554..8853)
                     /locus_tag="ACJJD2_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7579758.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            complement(9008..9787)
                     /gene="map"
                     /locus_tag="ACJJD2_001215"
     CDS             complement(9008..9787)
                     /gene="map"
                     /locus_tag="ACJJD2_001215"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HGG7579759.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            complement(9827..10477)
                     /locus_tag="ACJJD2_001216"
     CDS             complement(9827..10477)
                     /locus_tag="ACJJD2_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579760.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            complement(10485..11093)
                     /locus_tag="ACJJD2_001217"
     CDS             complement(10485..11093)
                     /locus_tag="ACJJD2_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HGG7579761.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            complement(11157..11750)
                     /locus_tag="ACJJD2_001218"
     CDS             complement(11157..11750)
                     /locus_tag="ACJJD2_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HGG7579762.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDILVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            complement(11755..12102)
                     /locus_tag="ACJJD2_001219"
     CDS             complement(11755..12102)
                     /locus_tag="ACJJD2_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HGG7579763.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            12156..13031
                     /gene="rsmI"
                     /locus_tag="ACJJD2_001220"
     CDS             12156..13031
                     /gene="rsmI"
                     /locus_tag="ACJJD2_001220"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HGG7579764.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLILYPAQDEKHEGLSESAQNVMKILAAELPTKQAAELAAKITGE
                     GKKALYDLAVSWKNK"
     gene            complement(13056..13451)
                     /locus_tag="ACJJD2_001221"
     CDS             complement(13056..13451)
                     /locus_tag="ACJJD2_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HGG7579765.1"
                     /translation="MFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAGHGI
                     LYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLF
                     AAVAGHVAMVVTHRVQGRDVLCRMTGRVR"
     gene            complement(13579..13689)
                     /locus_tag="ACJJD2_001222"
                     /pseudo
     CDS             complement(13579..13689)
                     /locus_tag="ACJJD2_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
BASE COUNT         2852 a         3246 c         3971 g         3632 t
ORIGIN      
        1 tggacggcgt aaacccgatt tttaacactg ccgcgaccat caccgaacag atggtatttg
       61 ccacccggtt cgtagtgttt tgcctgcata tcatcgcgca aacgggcatc caaaccgttc
      121 gcatgactaa tggggatttg cagcaacgat attgctgctg caaacagcat catgaatttt
      181 tgaataggca aattcatttt gttttccttg gtagcaagcg gttatggtag tgtgaatcaa
      241 ggttgccctt gtctatgttg tcgcactact tcatcgctgt atccataccc ctcatgactg
      301 ttatcagtct ctacggatgg ggcggagtta cccgtatgat tgccgtatgg tcggatatcg
      361 gagaaatcga ccattaatcc ttccgtcggt ttaattcctt tgcttacttt atacggcccc
      421 atccacaatg cgtaattttc tttataggca gcttcaaacg cattggtttt gggtttgatg
      481 agcaattttt tattggttct gtctactgcg aaatattcca gttttgtttg ggctttcagt
      541 gtttcggcat tgtataggtg catttcggtt ctgttgcgta tcgttccgaa tacgtcgatg
      601 ttaataaaca catctgtatc ggcattggca ggagaaacaa cgtctatgcc gcgcaggaaa
      661 aatacggtct gtaccaagtg ggaaagaaag gcagtgtcgc gcgggttagt cgtcaaggtt
      721 tcatttcgat aatcccccat cccgccaata tttaagccca gactgctcct acttccgcta
      781 ccgtctgatt gggtgcgcga gcgtgcaggg gcattaagtg tagataaaga agtggttaaa
      841 cctgtcaaac cgcctgatgt tgtttcagcg gtggtttcgt aacgtggata ggtgtaatcg
      901 gtacggacgg cagggctgtt tatgtattcg ccacgaatca gtgcatcaat ggagtagcga
      961 ccccctgtca aactgcctga accttggtcg cccatagttg caatgtacaa tgcaactttt
     1021 cgtccgtgta atgcctgtaa atccatgtct ttaacggcag ctctggcaga agcggccaca
     1081 agttcttgtt cgaccgcaaa gcgtttacct ccgccatgcg atggaatacc tgtcagtgtc
     1141 ccgcaggcgg ataaaataaa aactgaaaaa agaataggta tcagcagccg tgcttgcata
     1201 gattttctcc tttgatgaaa aacaaattgt atcaaaattg taaatatagt ggattaaatt
     1261 taaaccagta cggcaaggcg aggcaacgcc gtactggttt aaatttaatc cactataatc
     1321 tccatataat aaatggctgt ctgaagccca tatgcgacta tatctgccga cactatggtc
     1381 aatcagcagt gaaccagcgt accttcgttt tcaccggtta ctacacgttt gagcgagcct
     1441 tctttagcaa tgccgaatac tacaatattg agcttgcgtt cgcggcagag ggcgaaagcg
     1501 gtggcatcca tcactttgag gtttttcaac aaggcttcgt caaaagtaat ggtttcgtag
     1561 cgcgtggcgg atgagtcttt tttggggtct gcggtgtaca cgccgtcaac gttggtggct
     1621 ttgagcatca cgtcgcagtt catttccgca ccgcgcaatg cggcggcagt gtcggtcgtg
     1681 aagaacgggt taccggtacc ggcggcaaaa atcacgactt tgccttcttc caaatattgg
     1741 atggctttag gacgggcgta agtttcagcg atttgctgca tagacagtgc ggattgtacg
     1801 cgcgctttga tgcctaaagt ttcaaatgcg tctttgagtg ccaacgcgtt catcacggtc
     1861 gccatcatgc ccatgtagtc ggcggtggcg cgatccatgc tgcctgcttg ggcggatacg
     1921 ccccggaaaa tattgccgcc gccgacaaca ataccgactt gcacgcccat tttaacgact
     1981 tcggcaattt cgccgacagt ttgaacgatg gtatcgtgat tgatgccgaa cggatcggaa
     2041 cccatcaggg attcgccgga gagtttcagt aatacgcgtt tgtatttgat ttgctgtgtc
     2101 atgggatacc ttgctttctt gaatgtcgtc ggtcggagtt tgggccgtct gaatttcaaa
     2161 cggtcggaat attaatgata gggtgtgtcg gtttattatt gttttgtttt cagacggcct
     2221 ttatattcgg tcgtcttaaa ataggtaccg taaacggttt tctcaaaaaa aagcaccctg
     2281 attcgtttgg aatccaggtg ctttcttttt cataagtgcc ttacactttg gcggctgcgg
     2341 ctacttcggc tgcgtagtcg acaacggctt tttcgatgcc atcgcctact ttgtagcgta
     2401 cgaagctgac cacttcagtg ccgttttctt tggcgaattg ggcaacagtt tgatcagggt
     2461 tcatcacgaa tgcttggccg ttcagagtga tttcagccaa gaatttgcgg atacggcctt
     2521 caaccatttt agcggcgatg tcggcaggtt tgccggaagc gatggcttgt tcggtgtaga
     2581 tgtggcgttc tttttcaacg gtttcagcat ctacttcggc ttcgcttacg cattgtggtt
     2641 tggcggcaac aatgtgcata ccgattttgc gtgctacgtc ttcagagcct ttgtactcaa
     2701 ccaatacgcc ttcggtcgcc aatgcgccgt ggatgtaggc aaccagttgg ttggcagtgt
     2761 cgatcacttg gaagcgacgg acagacatgt tctcgcccaa tttggcgatg atggctttgc
     2821 gttctgcttc aaccagttcg ctcagttctt caacagaagc cggttttttc tcggcagcag
     2881 ttttcgcaac gaagttggca aattctacga agcccgcgtc tttagcaacg aagtcggttt
     2941 cgcagtttac ttcaaccaat gcgccgacat tgccgttgat tgcataagcc aatacgcctt
     3001 cggcagcggt acggccggcc agtttaccgg ctttcgcacc ggatttgata cgcaggattt
     3061 cttcggcttt gtcgaagttg ccttcggctt caaccaaggc ttttttgcat tccatcatgc
     3121 ccaggccggt agcggcgcgc agatcggcaa ccatttttgc agtaatttct gccattttga
     3181 atctcctaga tttttgggaa atacggaaag gattttccgc attcgggaat cgtgtgccgc
     3241 gaacggacgt tcagacggca tatttgagaa aaggggcata acgcccctct tcggtttgcc
     3301 agattactcg gcagcggctt cttgggcagc ggctacggtt tcttgcagcg cttggttttt
     3361 gccttccaaa actgcgtcag cgatgccgcg gcagtacagg cggatggctt tggcggagtc
     3421 gtcgttgccg gggatgacgt atttcacgcc gtcagggctg ttgttggtat cgactacggc
     3481 gataacgggg atgcccagtt tttcagcctc gaccagagta cctttttggt agccggtatc
     3541 gataacgaaa atcgcgtcgg gcaggccttt catgtttttg ataccgccca aagaacgttc
     3601 cagtttttca acatcgcgtt gcatttccag aatttctttt ttgctgaaac cgctttcggc
     3661 agcattttcc aaggctgcgg ttttttcttc caggcgtttg atggattgct taacggtttt
     3721 gtagttggtc agcataccgc ccaaccagcg gtaatcaacg aaaggcatac cggcgcgggt
     3781 cgcttcttcg cggatgatgt cgcgggcttg gcgtttggta cctacgaaca atactgtacc
     3841 tttgttggca accaaacgac gtatggcttc ttgcgcgtct tggaacatcg gcagggtttt
     3901 ttccaggttg acgatatgga ttttgttgcg cgcaccgaaa atgtattgtg ccattttcgg
     3961 gttccagaaa cgggtttggt ggccgaagtg gacaccggct tcaatcatct gacgcatagt
     4021 aatttgagac attttgattt ccttgaaagg gttaagggca cacattcaat cgcatagaac
     4081 ttgataggcg acgcctattg tcaagcaccc ttcggcgaaa gtgggcataa gttttaaaaa
     4141 ataaaagagt gtttccgaaa tggaaaactg acggattata gcggataaga ggccgtctga
     4201 aaagggattc agggttttgt gccgctgtct ttttgccgtt gtgcacgctg ctgttcgaat
     4261 tctgcctgtt cctgttgctt catcaagcgg ttgcggcggc ggacggttac gacgaagacc
     4321 gtgaacacgg tgggcagcac cgcccaaaaa accaaataaa tcaaggcgcg cgcaatactc
     4381 ggctgcgcgg cggaatacat aacggcaaca aaaagatagc cgatggcgac gatgtgccac
     4441 attgtgtgcg tcctgtttga atgttaacaa aatcgttata atcgcaacat tctaccgcaa
     4501 tcctgaaagg ccgtctgaaa tgaggaatga ggaaaaacgc gccctgcgcc gcgaattgcg
     4561 cgggcggcgt tcgcaaatgg ggcgggacgt gcgggcggcg gcaacggtaa aaattaaccg
     4621 cctgctcaaa cgttatatca agcacggtcg gaaaatcggc gtgtattggc cgatgggcaa
     4681 ggaattgcgt ttggacggct ttgtccgcgc ggcgcaaaaa cgcggcgcaa aactttatct
     4741 gccttatatc gaaccgcgtt cgcggcggat gtggtttacg ccgtatcctg aaagcggaat
     4801 ggaacgggag cgcatacggg gcagggcgag gttgaacgtg ccgcagtttg cagggcgcaa
     4861 aatccgcgtg cacggtttgt cggtattgct cgttccgctt gtcggcatag accgcgaagg
     4921 ctaccgtttg gggcaggcag gcggctatta cgatgcgacg cttgcagcga tgaaataccg
     4981 tttgcaggca aaaaccgtgg gcgtgggctt tgcctgccag ttggtggaca gactgtcggt
     5041 cgaggcgcac gacctgccgc tggacggttt tgtgtcggag gcggggatat tgtgttttta
     5101 gccgttcaga cggcattttg aacggaaatg ccgtctgaag gtggaatatt gggagaaaag
     5161 gatgtcggaa aagataatac tgccggtctt gtcgttgggt ggcgtacggc tcgaaccgtt
     5221 ggatgtgcat catgaaacgg gtttgcgcga ggcggtttgc gatggggaag tttggaagct
     5281 gggagtaacg tccgcgcccc atccggatag ggtggcagac tatatcggga cagcattggc
     5341 aacgcgtttg gcgtttgcgg ttgtcgatga agaggcgggc agggtggtcg ggacaacggc
     5401 gtattatcat tttgaaccgc agattccgcg tttggatatt ggattcacat ggtatgcggc
     5461 atcggcacgg cggacacgga taaacacctg ttgcaaaatc atgctgttgg attacgcatt
     5521 tgatgttttg gcttgccgtt gcgtgggatg gcgcacggat attctgaacc ttgcctcgca
     5581 acgtgccatc gaacggctgg gtgcggaaaa agacggcgtg ctgcgtatgc atatgctccg
     5641 taaagacggc agtgtgcgcg atacggtcgt gtacagtatg ctgagggaag attggtgcaa
     5701 aaacagggaa atcctgaccg gcaggttggc agggtatggc gtgcaggtgt gaggcagtat
     5761 tttcaaattt atagtggatt aacaaaaacc agtacagcgt tgcctcgcct tagctcaaag
     5821 agaacgattc tctaaggtgc tgaagcacca agtgaatcgg ttctgtacta tttgtactgt
     5881 ctgcggcttc gtcgccttgt cctgattttt gttaatccac tataaaaaac ttaacgcaat
     5941 atgctgacaa tcttttaaaa attaatatat aaacaatttt gattttttat ctattaaaaa
     6001 tttgatatat atagataaat aactattttt atttttcatt tcgcagtttc ccgacttggc
     6061 gggcgacaga aaaactttgc atttcccagt aaaatccact acattcacga taacatatta
     6121 caagcccctg aagcggtgtc ggaagccata cttgcaacgc attccaaccc cgaaacagca
     6181 tactcggaca cacaccattg tcggttttcc ctgcttttgc gattcaggcg tttgtagtac
     6241 ggcaaataac cataagggca gaagatgcct gttttttagg agtaaaccat ggctgaagcg
     6301 acagacgttg tcttggtggg cggcggcatt atgagcgcga ctttgggcgt tttgctcaaa
     6361 gaactcgaac cgtcttggga aatcaccctg attgaacgct tggaagatgt ggcgttggaa
     6421 tcgtcaaacg cgtggaacaa cgccggcacg gggcattccg cgctgtgcga attgaactat
     6481 gcgccgttgg gtgcaaatgg gattatcgat ccggcgcgcg ccctcaatat tgccgaacag
     6541 tttcatgtca gccgccagtt ttgggcgacg ctggtcgcgg aaggcaagtt ggaagacaat
     6601 tccttcatca atgccgtgcc gcatatgtct ttggtgatga atgaagacca ttgttcttat
     6661 cttcaaaaac gttatgacgc gtttaaaacc caaaaacttt ttgaaaatat ggaattttcc
     6721 accgatcgga acaaaatttc cgattgggct ccgctgatga tgcgcggccg ggacgaaaac
     6781 caacccgtcg ccgccaacta ctccgccgaa ggtacggatg tcgatttcgg acggctgacg
     6841 cgccaaatgg tgaaatattt gcagggcaag ggcgtaaaaa ccgagttcaa ccgccacgtc
     6901 gaagacatca aacgcgaatc cgacggcgcg tgggtgctca aaaccgccga tacccgcaac
     6961 cccgacgggc agctcaccct ccgtacccgc ttcctcttcc tcggcgcggg cggcggcgcg
     7021 ctgaccctgc tgcaaaaatc cggcatcccc gaaggcaaag gctacggcgg cttccccgtg
     7081 tccggcctgt tcttccgcaa cagcaacccc gaaaccgccg aacaacacaa cgccaaagtg
     7141 tacgggcagg cttccgtcgg cgcgccgccg atgtccgtcc cgcacctcga cacacgcaac
     7201 gtggacggca aacgccacct tatgttcggc ccttacgcag gcttccgttc caacttcctc
     7261 aagcaaggct cgcttatgga tttgccgctg tccatccata tggacaacct ctatcctatg
     7321 ctgtgcgccg gctgggcgaa tatgccgctg accaaatacc tgctgggcga attgcgtaaa
     7381 accaaagaag aacgcttcgc ctccctgctg gaatactacc ccgaggcaaa ccccgacgac
     7441 tgggaactca tcaccgcagg gcaacgcgtc caaatcatta aaaaagactc cgaaaaaggc
     7501 ggcgtgctcc agtttggtac ggagattgtc gcccacgccg acggctcact cgccgcattg
     7561 ctgggcgcgt cgccgggcgc atcgaccgct gtgccgctga tgatccggct gatgcaccaa
     7621 tgcttccccg agcgcgcccc gtcttgggaa gaccgtctga aagagctggt accgggttac
     7681 ggcatcaagt tgaacgaaaa ccctgaaagg gcggatgaaa ttatcgccta taccgcgaaa
     7741 gtattggata tttaagccga atctttcaag aaaagccgta cccccatatg gtgttgacgc
     7801 cgtccctgcc agttatgccc ttcatccggc agggcaggtt ttggtacacg gggcaggtaa
     7861 tcgttttttc ccttttgtga ataatggaac agtcaaaaaa cagcgttttc atttctgaaa
     7921 acgctgtttt ttgttgcctg attaacgtgg ggaacagtct ttgaagacga tttggttgtc
     7981 aggtgcggta atcataatgg gctgtttgcg gtaggattta ccatccatca cgccggtacc
     8041 caaaacataa ccgccttctt tgccgtagaa tgtttccaca ttgtcggatt tgtccaaatt
     8101 gacaggcatt tgcacgcgtt tgccgttgat gacggcggaa gcgtatgtgg tcaggccctg
     8161 tttgttgaag ccgtaggtta ctttgacttt tttaccttgc tggcagacgt agctgacggt
     8221 ttttttggca acggtggggt tgttcgtgcc ggcagcagca gccatactgc tgagcgcgat
     8281 tgcggaagac aggattgcgg tggtcagaag tttcattttt attcctttgg atggatgtgg
     8341 agtttgcccg tttcgagctg tttgacattc taatgtcggc gtatcctgaa ataaacagga
     8401 aattggataa agtttgtaaa aaggcgggtt cgggcggttc ggcggtttga ggcaggggcg
     8461 gcaggcggga tacggcgacc tgtccggtgt ttcagacggc attgtttgcg tttttcggaa
     8521 atgaaaaact ttcgggcatc cggaggttgc ggtttaactt tgtttttttc tttcggactt
     8581 ggtctgtttg gacaattcgg catacaggtc gggatggtgt tttttcaaca gggcggcgat
     8641 ttccatatct tttttgttga ctttcgccaa atcgatgcat tcgatatgga cgaggcggag
     8701 cagttcgcgt acgggtttgg gcattttgcg gccggtttcg tagcgcgagc ctccagactg
     8761 ggtaacgccg accttgcccc agaagtctat ctggttcagc ccggtctttt tacggatggc
     8821 tttaacatct tctatatttt caaatatttt cataaaactt cctttaagtt tgtctggttg
     8881 cggggcaaat tccgatttgc tttgttttcg taatgtgccg ggtcaagcct gtttttatat
     8941 tatatatcat atctgccgtt tctttcagac ggcattgttt gtttttatgg ggcggatacg
     9001 tccggcttca gggtttgccg gaggcggggc tgacggtgag gatttcgtag ccggtttcgg
     9061 tcaccaagac ttcgtgttcc cattgggcgg agagggagcg gtctttggta accaccgtcc
     9121 agccgtcgtt gaggatacgc aggtggcgtt tgccttggtt gatcatcggt tcgacggtaa
     9181 aaatcatacc cggttttaga acggggccct gccctttttt tccgtagtgc aacacttgcg
     9241 gggcttcgtg gaaaccgcgc ccgatgccgt gtccgcagaa ttcctgtacg acggaatagc
     9301 cggcgttttc ggcaacctgt tggcaggcgt agcctacgtc gcccagtgtc gcgccgggtt
     9361 tgacggcttc tatgcccgcc atcatggagg cgtgggttac gtcgatcagc cgttgggcga
     9421 tgggggagac tttgccgacg gtaaacatac ggctggagtc gccgtggaag ccgtcttttt
     9481 tgatggtgag gtcgatgttg ataatgtcgc cttctttgag cggcttgtcg tcgggaatgc
     9541 cgtggcagat gacgtggttg acggaggtgc agcaggattt ggggtagggc gggttgccgt
     9601 agtgcagggg ggcgggatag ccgccttgga cgttgacgtg gtagtcgtaa acgagtttgt
     9661 cgatttcgtc ggtggttacg ccgggtttga cgaattgtcc gatgtagtcg agggcttcgg
     9721 cgacgagttt gcccagctcg cgcatttttt cgatttcttc gggggttttg atgatgatgc
     9781 cgttcataat gcttccttgg attgcgggtg tgcctgccgt gccgggtcag aagaggttgt
     9841 cgagaatttc tttatggggt ttgggcggcg tgtttttcgg ggtgtccggt ttggtatggt
     9901 tttctttggg cgtttctttt tctttgggtg tttctttggg ctgcgcctgt ttttcgggtg
     9961 tttcttttcg gggttcggga cgggggacgt ttgtgggcag tacgggggtt tctttgagtg
    10021 tgttttcagc ttgtgttccg gcgtcgtccg gctgcctgtc ggtttgagct gtgtcggcag
    10081 gttgcggttt gacccggttt ttcttgggtg cggcagggga cggcagtccg ctgccgcttt
    10141 cgtctgtgcc gtccggctgt gcgggttcgg atgaggcggc gtggtggtgt tcgggttggg
    10201 cggcatcttg tccgactacg ccgtttggca gccagaattc ggtttcgcgg gggctgtcgg
    10261 tgtgttgcgg ttcggtttgg agggttttgc cgccgttcgg gttgaatgtg ctgacgatgc
    10321 ctattgccaa tgcgccgatg gcggtgatac agatgagcaa tacgacgcgt atcaggagtt
    10381 tgggggtcag cctgaagggt ttgttcggtt tttttgccat tttgattgtg cttttggggt
    10441 gtcgggcaat gccgtctgaa ggcggttcag acggcattgc cgagtcagcg ttggacgtag
    10501 ttttggtaga gggtgatgac tttttgtacg ccgacggtgg tgctgacttt ttgggtaatc
    10561 tgcgcctgtt cttcgggggt gaggatgccc ataacgtagg ttacgttgcc gtaggtaacg
    10621 attttgacgc gcgcctgtgt ggcggggctg atgcccaaca gcgtggcgcg gactttggat
    10681 gtgttccaag tgtcgccggc gatgtcgccg gcagtgcgcg gcagggaggc gacggtaatg
    10741 tagttgtata cgccttcggc ggcctgttcg gaacgtgcaa tctgaccgac gaactgtttc
    10801 tcgccttcgg tggcgacttg tccgagcagc agcaggtggc ggttgtagcc gacaacggag
    10861 atttggggcg tgtagccttt ggtttggttg ttttggcgca gataggagcg ggcggtggtt
    10921 tcgatacgca acgccataac gttgtcgtcg gtttgcgcgc cggtggttcg gcggtcgacg
    10981 gcggatttcg cgccgacggc ggcgcttccg attactgcgc tgacgcagcc gctaagggca
    11041 aggctgaaaa tggcggcaat cagggtgcgg acggtgtgcg gtttgggttt catcgggggc
    11101 ttcctttctt gggcgtttca gacggcattg ctttgcgcca tgccgtctga aaagggttac
    11161 attccttcca gcagtacgga gtcgatacag tcgcatatgg cgtgtatcag caggatgtgg
    11221 ttttcctgaa tgcgggcggt gcgcggatgg gggacgttga gcagaacgtc ggtgtctttg
    11281 agtatggcgg cgattttgcc gccgtcgcgg ccggtcaggg cgatgacgtg catatcgcgt
    11341 tcgtgtgccg ctttaatggc ttcgatgacg ttggcggaat tgccggaagt ggaaatgccg
    11401 acgaggatgt cgccggcgcg tccgagggcg cgtacctgtt tgctgaagac gtggttgaag
    11461 ccgtagtcgt taccgatggc ggtcagcgcg gatgtgtcgg tggtcagggc gacggcggcg
    11521 agttccatgc gctctttttc aaagcgtccg gtcatttcgg cggcgaagtg ctgcgcgtcg
    11581 gcagccgaac cgccgttgcc gcacgccaga atcttgccgt cgttcatcag gcattgcagc
    11641 atcagctcgg cagcctgtac ggtcggctcg accaatactt ttccggcttc ctgcttggca
    11701 cggatgcttt cggcaaaatg ggcggcaacg cgttcttgta atgtcgtcat atcgtcaacc
    11761 tgtaatattc tgtatccact cgggcgggcg gctgccttcg atgagtaccg cgtcgaggcg
    11821 gcacggtacg tttgtcaacc tgttctgttg cagataatac tctacacttc gttgcagttt
    11881 caataatttg gatggggaaa tgctgtatgc ggcaccgccg aattgccgat ttttgcggta
    11941 ttttacttca acaaacagaa tcatgccgcc gtttttgaca atcaggtcga tttcgccgta
    12001 ggcgcagtgc cagttgcggg caagcagtgt gcagccttgg gattggagga aggcaagcgc
    12061 ggcatcttcc cctgcctcgc cctgtttgtg gtttaggcgc ataatcggtt taacctttat
    12121 aatttataat gtttgttttt cagacggcat tttttatgtt tcagaaacac ttgcagaaag
    12181 cctccgacag cgtcgtcgga gggacattat acgtggttgc cacgcccatc ggcaatttgg
    12241 cggacattac cctgcgcgct ttggcggtat tgcaaaaggc ggacatcatc tgtgccgaag
    12301 acacgcgcgt taccgcgcag cttttgagcg cgtacggcat tcagggcaaa ctcgtcagcg
    12361 tgcgcgaaca caacgaacgg cagatggcgg acaagattgt cggctatctt tcagacggca
    12421 tggttgtggc acaggtttcc gatgcgggta cgccggccgt gtgcgacccg ggcgcgaaac
    12481 tcgcccgccg cgtgcgtgag gtcgggttta aagttgtccc tgttgtcggc gcaagcgcgg
    12541 tgatggcggc tttgagtgtg gctggtgtgg cgggatccga tttttatttc aacggttttg
    12601 taccgccgaa atcgggcgaa cgtaggaaat tgtttgccaa atgggtgcgg gcggcgtttc
    12661 ctatcgttat gtttgaaacg ccgcaccgca tcggggcgac gcttgccgat atggcggaac
    12721 tgttccccga acgccgtctg atgctggcgc gcgaaatcac gaaaacgttt gaaacgttct
    12781 taagcggcac ggttggggaa attcagacgg cattggctgc cgacggcaac caatcgcgcg
    12841 gcgagatggt gttgatactg tatccggcgc aggatgaaaa acacgaaggc ttgtccgagt
    12901 ccgcgcaaaa tgtgatgaaa atccttgctg ccgaactgcc gaccaaacag gctgccgagc
    12961 ttgccgccaa gattacaggt gagggcaaaa aggctttgta cgatttggca gtgtcgtgga
    13021 aaaacaaata gtgcggcacc atagtgcgaa cggaatcagc ggacacgccc cgtcatgcgg
    13081 cacagaacat ctctaccctg aacacggtgg gtgacgacca tggcgacgtg tccggcgacg
    13141 gcggcaaaca gcagccagcc caaattgccg tggaacgtgt tgcccaagtt tgccatccac
    13201 tcgatttttt ccggcgaacc ctgcatcact tcaacgccga acactttcaa cgggccgcgg
    13261 ccgctgccgt attggcggat catgccgata acgggaacag caagcatgag cagatacaga
    13321 atgccgtgtc ctgccgccgc agccttgctg tcgctttgcg gacgcttggc gcggttggca
    13381 actgcccaca cgatgcgcaa tgtaatcacc gtcagcgtga ggaagccgaa agatttgtgc
    13441 aggccgaaca ggctgcccgc ccattccgcc tcttcgtata gtggattaac aaaaaccagt
    13501 acggcgttgc ctcgccttgc cgtactattt gtactgtctg cggcttcgtc gccttgtcct
    13561 gatttttgtt aatccactat aaatcgtcca caggacaatg gtggtcagaa tgccgatgaa
    13621 gccggcaacg gtcagccagt gcagcgcgcg tgtcaacggg tcgtaaacgg caggttggtt
    13681 tgtgttcata aaaaacttag g
//
LOCUS       DBBZXW010000047        13155 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.047, whole genome shotgun sequence.
ACCESSION   DBBZXW010000047 DBBZXW010000000
VERSION     DBBZXW010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13155
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.047"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..1377)
                     /gene="mutL"
                     /locus_tag="ACJJD2_001223"
     CDS             complement(<1..1377)
                     /gene="mutL"
                     /locus_tag="ACJJD2_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HGG7579766.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGSGIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCTTMLERLALAHPHIAFSLKRDGKQVFKLPTQSLPERIAAIVGDDFQT
                     ASLEIDSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFDSASDYPTGNKPDTRNAFGASGKTAPMP
                     YQAARAPQQHSLSLRESRAAMNTYAELYKKTDDIDLELSRLEQARFGNMPSETPAPQT
                     DTPLSDGIP"
     gene            1520..1705
                     /locus_tag="ACJJD2_001224"
     CDS             1520..1705
                     /locus_tag="ACJJD2_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HGG7579767.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            1716..2384
                     /locus_tag="ACJJD2_001225"
     CDS             1716..2384
                     /locus_tag="ACJJD2_001225"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7579768.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTVLALALPKHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            2384..3100
                     /locus_tag="ACJJD2_001226"
     CDS             2384..3100
                     /locus_tag="ACJJD2_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HGG7579769.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRPEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGKIVRLSNEVETLNGKVKALEHAKTHPSGRTYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSL
                     IQAYPGSPAAKRAASAIRKR"
     gene            3148..3633
                     /gene="purE"
                     /locus_tag="ACJJD2_001227"
     CDS             3148..3633
                     /gene="purE"
                     /locus_tag="ACJJD2_001227"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HGG7579770.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARERGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(3816..5270)
                     /locus_tag="ACJJD2_001228"
     CDS             complement(3816..5270)
                     /locus_tag="ACJJD2_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HGG7579771.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACEII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(5267..5968)
                     /locus_tag="ACJJD2_001229"
     CDS             complement(5267..5968)
                     /locus_tag="ACJJD2_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HGG7579772.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREKGVSWDSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALAGSNIE
                     PIVFEREIDTWKTEFFTNINAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(5965..6744)
                     /locus_tag="ACJJD2_001230"
     CDS             complement(5965..6744)
                     /locus_tag="ACJJD2_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HGG7579773.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKA"
     gene            7028..8434
                     /locus_tag="ACJJD2_001231"
     CDS             7028..8434
                     /locus_tag="ACJJD2_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7579774.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADM
                     NESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLAGLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            8546..10072
                     /locus_tag="ACJJD2_001232"
     CDS             8546..10072
                     /locus_tag="ACJJD2_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HGG7579775.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVFRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
     gene            10127..10660
                     /locus_tag="ACJJD2_001233"
     CDS             10127..10660
                     /locus_tag="ACJJD2_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HGG7579776.1"
                     /translation="MFPPDKPLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
     gene            complement(10703..12004)
                     /gene="aroA"
                     /locus_tag="ACJJD2_001234"
     CDS             complement(10703..12004)
                     /gene="aroA"
                     /locus_tag="ACJJD2_001234"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HGG7579777.1"
                     /translation="MTESLRLPAASLKPSTVALPGSKSISNRTLLLAALSDNTCEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGKRQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     ENYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVCVIGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQSFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPETLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            12399..12875
                     /gene="greA"
                     /locus_tag="ACJJD2_001235"
     CDS             12399..12875
                     /gene="greA"
                     /locus_tag="ACJJD2_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HGG7579778.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
BASE COUNT         2953 a         3651 c         3501 g         3050 t
ORIGIN      
        1 tgggatgccg tctgaaagcg gcgtatctgt ttggggagca ggcgtttcag acggcatatt
       61 gccgaaacgt gcctgctcta atcggctcaa ctcaaggtcg atgtcgtcag tttttttgta
      121 aagctcggcg taagtattca tggccgcgcg gctttcgcgc agggacaggc tgtgttgttg
      181 cggcgcacgc gcggcttggt aaggcatggg cgcggttttg cctgatgcac caaaggcatt
      241 gcgtgtatcg ggtttgttgc ctgtcgggta gtcggatgcg ctatcaaaca gattttcgct
      301 gtcgttttca gacggcattg gggcaggcgt aacgccggta atgtcatgca acacttcgcc
      361 tgcgttgctg acgctttcgg tcaagtcggc gcgtgtgtcg gcaagggctt tgttgagcgt
      421 gtggaacacg agttggtgca cctgccggct gtcgcggaag cggatttcgg ttttggtcgg
      481 gtggacgttg acatccacgg cttcgggcgg caggtcgaga aagaggacga aagcaggggt
      541 aagggcgttg tgcaatacgt cgcggtatgc ctgtttgacg gcgtggagca tcactttgtc
      601 gcggacaaaa cgatggttga cgaagcagta ttgtttgtca gttttgcctt tggcaaaagt
      661 cggcttggca attgcgccat agagccgcaa tgcgccattg ccgctgtcaa tttccaatga
      721 agccgtctga aaatcatcgc cgacaatggc ggcaatccgt tcaggcaagc tttgggttgg
      781 gagtttgaat acttgtttgc cgtcgcgttt gagtgagaag gcaatgtgag gatgcgccag
      841 tgcaaggcgt tcgagcatgg tggtgcagtg ggcgtattcg gtgttttcgg atttgaggaa
      901 cttgcgccgc gcaggggtat tgaagaagag ttcggcggct tcgatggtgg tgccgacggg
      961 gtgggcggct gccgtagggc tgctgagttt tccgtcttct gctttgactt gggtcgcgtg
     1021 cgaactgtct tcttgacggc tggtcagggt taggcggctg actgaggcga tactggccaa
     1081 accttcgccg cgaaagccca tgctggcaac gtgttccaaa tcgtttagag ttttgatttt
     1141 gctggtggcg tggcggtgga gcgcaagccc gatgtcgtct ggatggatac cgctgccgtt
     1201 gtcgctgacg cggatgagac ggatgccgcc gcccgccagt tcgacatcaa tcgccgtcgc
     1261 gcctgcgtct atgctgtttt caacgatttc ttttaaggcg ttggcggggc gttcgaccac
     1321 ttcgccggcg gcgatttggt tgacaagatg gtcgggcagg gcggcaatgc gtggcataag
     1381 gtaggcttcc gttgcaaaaa cgctttattc tataataaaa ccccttactt ttctgcctgt
     1441 attcttgata aaagccgttt atcccgtttg gaaaatacca gtataatcac gccgtatccc
     1501 gtaaaattgg agcgcaaaga tgtatcacta ccaatccgaa gccacacaat tcctcaaccg
     1561 tctgattgaa gaaaaacctg agttggaaca gcagcgtttg gaaaaccggg ggcttttgtg
     1621 ggatgtcgaa ctcaatcccg aagaacagga aaacttcgag gcggcaaaag tagcgaaaaa
     1681 accttatacc tattaccaag actgaaccca ccgaaatgac gacccatctg tccaatgtcg
     1741 caccggacct gcaaaactat ttgaacgcca tcggcgaacc cgaacatccc gttttgacgc
     1801 ggctgcgtga gaagaccgag catcaccgta tgggcaaaat ggcgattgcg cgcgaacagg
     1861 cggcggtttt ggtttggctg gcaaagctga ttcgcgcgga aaaatatctg gaagtcggcg
     1921 tatttaccgg atacagcagc accgtgcttg cattggcgtt gccaaaacac gggcggatta
     1981 ccgcctgcga catcaatgta acctttaccg atacggcgcg tcaggtttgg aacgaggcag
     2041 gcgtggcaca taaaatcagc ctgcatctgc aacccgcatt gctgacattg gatgatttga
     2101 ttgcacaggg tgaagccgga agctacgatt tggcactgat agacgcagac aaaccgccca
     2161 cgccgcaata tttcgagcgt tgcctcaagc ttgtccggca aggcggcatc attgccatcg
     2221 acaatatttt gttgaacgga agggtgatgc gcgaagcggc ttccgatgcg ccgcccagcg
     2281 tcggcatcct caaagatttt aatcaaaacc tgccgaacga cccgcgcatc gtccccatca
     2341 ccctgcccgt cggcgacggt ttgaccctgc ttctgaaaaa ataatgaaga ccaaattacc
     2401 gctttttatc atttggctgt ctgtgtccgc cgcctgttct tcccctgttt cccgcaatat
     2461 tcaggatatg cggcccgaac cgcaggcaga ggcaggtagt tcggacgcta ttccctatcc
     2521 cgttcccact ctgcaagacc gtttggacta tctggaaggc aaaatcgtcc ggctgtcgaa
     2581 cgaagtggaa accttaaacg gcaaagtcaa agcactggaa cacgcaaaaa cacacccttc
     2641 cggcaggaca tacgtccaaa aactcgatga ccgcaagttg aaagagcatt acctcaatac
     2701 cgaaggcggc agcgcatccg cacataccgt tgaaaccgca caaaacctct acaatcaggc
     2761 gctcaaacac tataaaagcg gcaggttttc tgccgctgcc gccctgttga aaggcgcgga
     2821 cggaggcgac ggcggcagca tcgcgcaacg cagtatgtac ctgttgctgc aaagcagggc
     2881 gcgtatgggg aactgcgaat ccgtcatcga aatcggaggg cgttacgcca accgtttcaa
     2941 agacagccca accgcgcccg aagccatatt caaaatcggc gaatgccaat acaggttgca
     3001 gcagaaagac attgcaaggg cgacttggcg cagtctgata caggcttacc cgggcagccc
     3061 ggcggcaaaa cgcgccgcct cagccatacg caaacgatag tttttccatt tttccgcttt
     3121 ttaccccatc cgcaccaagg aggatttatg attcaaatcg gcatcatcat gggcagcaac
     3181 agcgattggc ccgttatgcg gcaggcagcg cagtttcttg aagagttcgg cgtagaatat
     3241 gaggcgcgcg tcgtttccgc acaccgcacc ccggatttaa tgttccaata cgctgaaacc
     3301 gcacgggagc gcggcatcaa agccattatc gcgggcgcgg gcggcgcggc gcacctgccc
     3361 ggcatggttg ccgccaagac caccgtcccc gttttgggcg tacccgtccc cagcaaatac
     3421 ctgcgcggcg aagattcgct tttatcgatt gtacaaatgc ccaaaggcgt acccgtcgcc
     3481 acattcgcca tcggcgaggc aggcgcggca aatgccgcat tgttcgccgt ttccatgctc
     3541 gccaacgaaa cccccgaact ggcgcaaaaa ctggcagact tccgagccaa acaggaacag
     3601 gctgttttga gtatggaatt ggaacagatt taaaacccgc cgtccgcgaa tatatagtgg
     3661 cttaaattta aaccagtacg gcgttacctc gccttgccgt actatttgta ctgtctgcgg
     3721 cttcgtcgcc ttgtcctgat ttttgttaat ccactataca aatgccgtct gaagccctgt
     3781 ttcgggtttc agacggcatt tttgcgaaca actttttatg cctgttcttt ttggcgcatt
     3841 ttttctgcca tcagttcgtg cagggttttc ttcgccggtt tcatcggcac gcggttttgc
     3901 gtccaaccca actgtttgcg cggggtcagg ttgcggaact tggtggctgc ccaaccgaag
     3961 gcgcggtagg ttttgctgcc gctgaaaata ccgttgaatg tgcgccacgc catttgttcg
     4021 ccgaaggtat gcgatgcgcc ttgcccccgg atggggtgcg gcacggtttc ggtcggcgaa
     4081 cgttgcgctt caacgcgcaa acgctgcatt tgttcggtaa tcgggatgcg taccggacaa
     4141 acttccacgc acgcgccgca catcgtgcag gcggtcggca ggtcgcgagt ggcatccaag
     4201 cctaacaggt gcggggaaat aatctcgcca atcggaccgg gataggttgt gccgtatgcc
     4261 gcgccgccga tgcgggtata aaccgggcaa tggttcatac acgcgccgca acggatacat
     4321 tgcagggtgc ggcgcatttg gtcttcggca taagcctggc tgcggccgtt gtcgagcaga
     4381 accaagtgca tttcttgcgg accgtctaat tcttcactgc ggcgcgggcc ggtaatcata
     4441 ttgaaatagg ttgtgatgtt ttgaccgatg gcggagcgcg gcagcagact gtacaagggt
     4501 gggatgtcgg acaatttcgc caccactttt tcaatgccgg taatagcgat atgcacgggc
     4561 ggtacggtgg tactcaagcg accgttgccc tcgttttcca ccagacacag cgtacctgtt
     4621 tcagcaacgg caaagtttac gccactcaaa ccgacatcgg cagtgctgta aatatcgcgc
     4681 agtgctttac gggcgaagcc ggtcagttgg tctacatcgt ctgtcagcgg cgtaccgagg
     4741 ttttggtgga acagttcgct aacctgttct ttggttttat ggattgcggg catcacaata
     4801 tgggtcggtt tttcgcctgc catttggacg atgaactcgc ccaagtcgct ttctaccgct
     4861 ttaatgcctt ttgcttcaag ataatggttc agctcgattt cctcgctgac catcgatttg
     4921 cctttgacca tcagcttgcc gtttttggct gtgatgatgt cgtggatgat ttcgcaggct
     4981 tcggccggtg tttccgccca gtgtactttt acgcccaact tagtcaggtt ttcttccagc
     5041 tgctccagca gggcaggcaa tttagacaat gagcgctgac ggacgtgttc gcacaaatcg
     5101 cgcaagcttt gcagctcttc ttcgtcggtc aaaacggctt tgcgtttggt catcagcata
     5161 tccatcgcgg tacgcaggct tttacgcaaa ggcttgtctt gaagggaaat tgcggcgttt
     5221 tgcttgaaag tttccggctt catgtgaaat ttgatggttt gcgtagtcat gcgttttcct
     5281 ccaaatcggc aggggaaatg tggtcgggca ggatggcgag gatgaccaaa tcgcgcgggc
     5341 cgtgcgcgcc gtaagcaagc gtcagttgga tgtctgcggt tttggacggg ccggaaatca
     5401 ggaatacatt ggtcggcata ccgttttcca ccagtttttc gccttcgacg gcattgtgaa
     5461 actcgttgta catcttggac gtatcgaaca ggcagaaatg cacgggcgga acgagactca
     5521 aagtacgcgg ttcttcgggg ctggaaaaca gcatcagcgt gccggtgcgg gcgatgccgc
     5581 attgcgcgcc gctgaagccc gcattgatgt tcgtgaaaaa ctcggttttc caagtatcga
     5641 tttcgcgctc gaagacaatc ggttcgatat tgctgcccgc caatgcggca cgggcaattt
     5701 gtccgtgttc ggtcgccaag ggcagcagga tgtttttcaa acccttgcct tctgccgctt
     5761 cgcggaaaac ctgcatccaa ttgcttttcg tcacccaata aatttcggtt ttgaccgcgc
     5821 gcattgcggc agcccaatgt ttcagacgct cggcttcgct gtcccaagaa acgccctttt
     5881 cgcggtaata atcgaaaacc gcaggctctt ccatcggcaa ggcatcggct tttttcagtt
     5941 ttgccaaaat attttcacgc gcgctcatgc tttgcctccg gtgcgttcca acaagaagga
     6001 tgcgatatgt ttcggacgcg gcatatccgg ctcgtccttg gcgattttgc cgccgatgtt
     6061 catcatacag ccgcagtccg cgctgatgat ttcggttgcg ccggtttctt tcagcgcggc
     6121 gactttgtcg gttaccatcg cgccggaaat atcggcttgt ttgacggaga atgtgccgcc
     6181 gaagccgcaa cattcgcttt cgtggtcgtg gacgatgcgt tcgacgtttt ccataccgtc
     6241 aatcagttgc cagcctgaaa gatggacatt catttcgcgg cgggcggcgc aggaagtgtg
     6301 aacggcgact ttgagcggtt cgcccttgtc ttcgggtttg aaaccgatgg caagcaggaa
     6361 atgggtaaac tcgatgatgc ggccggcgca atccacagcc ctttcctcgt actcgctgcc
     6421 tttaaacagc gtcggccaat ggtgtttcat cataccgccg cacgaaccgg acggtacgac
     6481 aatcggccac tcctcgggga aaaggtcgag ttgcgctctg gcgacatcaa aggcttcggt
     6541 cggatggccg gatgaatagg caggctggcc gcagcagctt tgcgccatcg ggaaatggac
     6601 gcgtatgccc tgctgctcga ttagggcaat ggcatccatg cctgcttcgg gcataaaaag
     6661 atcaaggacg caagtgccga aaaaatagac atcggtcgga ttgctgtcgt atcggatgat
     6721 ttttggggga atggttgcgc tcatgttttt tgataacggg aaacccgttt ttctctgtag
     6781 aaaggtaagc gtttacttta agtaattgac tgttgcgggt caagtctaat tttaaaaaat
     6841 aatccggttt ttcttacaaa ctaccccata acgcttactg taccttactc tgataatttt
     6901 cgataataat tatcattaca ataaaatgct gattcgtttg cttgtgaaca ttcaggacgc
     6961 cgactctgac ggcattcaga cagcatctga aaacaataac ggcacaagga tggggtacaa
     7021 tcgccctatg gaaaaaaaca ccctatccgc ccgcgcacca tccccttggc tgccgcttct
     7081 gctggcaatt gccattttta tgcagatgtt ggatgcgacc attttaaata ccgcactgcc
     7141 tgaaattgcc gccgacatga atgagtcgcc tctggatatg caactggcag tcgttgccta
     7201 tacgctgacg gttgccctgc tgattccttt gagcggttat ttggcggaca ggttcggaac
     7261 gaaaaaagtc tttttcggtt cgattgccgt ttttatgctc ggatcggcat tgtgcgccgc
     7321 atcgggttcg ctgtttgaat tgacgctttc ccgtgtcgtt cagggcatcg gcggttcgat
     7381 gctggttccg ataccgcgtc tgaccatctt gcgtgtgtac gacaagtcca agctgctcaa
     7441 cgccatcaat tatgcggtta tgcccgcatt aatcggaccg gttttagggc ctttggcggg
     7501 cggttatctg gtcgaatacg cttcgtggca ctggattttc ctgctcaacc tgcccatcgg
     7561 tcttttgggt ttcatattgg gacgcaacat catgcccgat attaaaggca gcaatatctc
     7621 tttagacttc aaaggttatc tgattttttc tgccgccgcg tgcctcttgt tactttcggc
     7681 agaaagcctg tcgcacgcgc tgcctccgta ttttgcactg ttgccgctgt gcggcggact
     7741 gctgtttgca cgccgttatt tccgacatat gaaaaccgcg tccaaaccga tttattccgc
     7801 cgacctgttt ctgatacgca ctttccgtct gggactggcg ggcaatctgt tcagccgtct
     7861 cggcatcagc tcgattcctt ttctgatgcc cctgatgttt caagtcgctt tcggcttcgg
     7921 cgcaagcctg tcgggttggc tggtcgcccc cgtcgccctg tcttcgctgc tggtcaaacc
     7981 gctgattgca ccgctcatga aacgtttcgg ctaccgcacg gtactgcttt ggaacaccaa
     8041 gctgcttgcc gccttcatca tgctgctcgc cctgcctgac ggaaactcgt cgctgtggat
     8101 ttggattttc ctctcgctgg cgatcggcgc gtgcaactcc ctgcagtttt ctgccatgaa
     8161 tacactgacc ctcgccggtt tgcgcccgca acagaccggc agcggcaaca gcctgatggc
     8221 ggtcaaccaa cagcttgcca tcagcatggg cattgttgtc ggcgcattaa tccttaaaaa
     8281 ctggacattt ctgataccgg cttcttcagg tctgcattcc gccttccgta tgaccctgct
     8341 cagcatcggc ggcatcaccc ttgcctcgtc gttggttttc aagcgtctgc acgtttcaga
     8401 cggcgcaaac ctgacacgga acacaccgtc ctaaagcggt ccgcacgcaa aacttttacc
     8461 cgtttcaacg tttggattat gattccgcac ttccatgcgc gccaacccca aaacacaggc
     8521 aatgccgtct gaaaccatat ccctgatgaa aacacgcagc ctaatttccc ttttatgcct
     8581 ccttctctgt tcatgttctt catggttgcc cccactggaa gaacggacgg aaagccgtca
     8641 tttcaatact tccaaacccg tccgcctgga caacatcctg caaatccggc acacccctca
     8701 taccaacggg ctatccgata tctatctgct gaacgacccc cacgaagcct ttgccgcccg
     8761 cgccgccctt atcgaatctg ccgaacacag cctcgatttg caatactaca tctggcgcaa
     8821 cgacatttcc ggccgactgc tgttcaacct cgtgtacctt gccgcagaac gcggtgtgcg
     8881 cgtacgcctg ctgttggacg acaacaacac gcgcggattg gacgacctcc tgctcgccct
     8941 cgacagccat cccaatatcg aagtgcgcct gttcaacccc ttcgtcttcc gcaaatggcg
     9001 cgcactcggc tacctgactg acttcccccg cctcaaccgc cgcatgcaca acaaatcctt
     9061 taccgccgac aaccgcgcca ccatactcgg cggacgcaat atcggcgacg aatacttcaa
     9121 agtcggtgag gacaccgttt tcgccgacct ggatatcctc gctaccggca gcgtcgtcgg
     9181 cgaagtatcg cacgacttcg atcgctactg ggcaagccat tccgcccaca acgccacgcg
     9241 catcatccgc agcggcaaca tcggcaaggg tcttcaagca ctcggataca acgacgaaac
     9301 gtccagacac gcgctcctgc gctaccgcga aaccgtcgaa cagtcgcccc tctaccaaaa
     9361 aatacagaca ggacgcatcg actggcagag cgtccaaacc cgcctgatca gcgacgaccc
     9421 tgcaaaagga ctcgaccgcg accgccgcaa accgccgatt gccgggcggc tgcaagacgc
     9481 gctcaaacag cccgaaaaaa gcgtctatct ggtttcaccc tatttcgtcc ccacaaaatc
     9541 cggcacagac gcactagcaa aactggtgca ggacggcata gacgttaccg ttctgaccaa
     9601 ctcgctacag gcgaccgacg ttgccgccgt ccattccggc tatgtcaaat accgaaaacc
     9661 gctgctcaaa gccggcatca aactctacga gctgcaaccc aaccatgccg tccctgccac
     9721 aaaagacaaa ggcctgaccg gcagctccgt aaccagcctg cacgccaaaa ccttcattgt
     9781 ggacggcaaa cgcatcttca tcggttcgtt caacctcgac ccccgttccg cgcgtctcaa
     9841 caccgaaatg ggcgttgtta tcgaaagccc caaaatcgca gaacagatgg agcgcaccct
     9901 tgccgatacc acccccgaat acgcctaccg cgttaccctc gacaggcaca accgcctgca
     9961 atggcacgat cccgccaccc gaaaaaccta cccgaacgaa cccgaagcca aactttggaa
    10021 acgcatcgcc gcaaaaatcc tatccctgct gcccatagaa ggtttattat agaaatgccg
    10081 tctgaaacac cttcagacgg atatccgaac ccgcaaagga aaaaccatgt ttccccccga
    10141 caaacccctt ttcctctgtc tcagcgcact actcctcgcc tcatgcggca cgacctccgg
    10201 caaacaccgc caaccgaaac ccaaacagac agtccggcaa atccaagccg tccgcatcag
    10261 ccacatcgac cgcacacaag gctcgcagga actcatgctc cacagcctcg gactcatcgg
    10321 cacgccctac aaatggggcg gcagcagcac cgcaaccggc ttcgattgca gcggcatgat
    10381 tcaattcgtt tacaaaaacg ccctcaacgt caagctgccg cgcaccgccc gcgacatggc
    10441 ggcggcaagc cgcaaaatcc ccgacagccg ccttaaggcc ggcgacctcg tattcttcaa
    10501 caccggcggc acacaccgct actcacacgt cggactctat atcggcaacg gcgaattcat
    10561 ccatgccccc agcagcggca aaaccatcaa aaccgaaaaa ctctccacac cgttttacgc
    10621 caaaaactac ctcggcgcac atactttctt tacagaatga gccgcccgcc gcgccgcgcc
    10681 ggaatcgcgg caaaatgccg ccttattccg ttgtttcggt cagtgaagag aacacgtcga
    10741 aataagtcgg gaaggtttta tgggtgcatt tcggatcgtt gatgacgacg ggtacgccca
    10801 acagcgaaac cagcgagaaa cacatcgcca tgcggtggtc gtcgtacgtg tcgatgacgg
    10861 cgtcgggtgt cagcgtttcg ggcggggtga tgtgaattgc ttcggcttct tcgacgactt
    10921 ttgccccgag tttgcgcaac tcgtttgcca tcgcggcgat gcggtcggtt tctttgacgc
    10981 gccacgaacc gatgttgcgc agcgtgcagg tttgccctgt agcaagcgcg acgatggcga
    11041 gggtcatggc ggcatcgggg atatggttcg catccaaatc aaaggattgg acggcacgtt
    11101 ccttcgggcg tgaaacttcg acgaagtttt cgccccaaac cacgtccgcc ccgatttttt
    11161 ccagctcgcg ggcaaaggcg acatcgccct gtatgctgtt tgcgccgata ccgataacac
    11221 agacgggcgt ggcggcaatc aaaccggctg cgaggaagta ggacgcgctg gaggcatcgc
    11281 cttcgacgtg caagtgttcg ggcgcgtggt agtgcgcatc ggcgggaatt ttgaagacgc
    11341 ggtagttttc attggcaacc tgtacgccga attgcgccat cagttttaaa gtaatgtcga
    11401 tatagggctt ggaaatcaat tcgccgacca tacggatttc aaacgcctgc ccggtcagcg
    11461 gcaacgccat taaaagggcg gtcagaaact ggctggacac attgccttta atcggaatca
    11521 cgcgttcgcc gttgtcttga cgtttgccga tatgaagcgg cggatagtgt tccttgccga
    11581 gatattcgac atcggcgccg gcaatccgca gcgcatcggc caaatcgccg atggggcgtt
    11641 cgtgcatacg aggcacgccg tgcagatgat aatcgccgcc caaaacggca agtgcggcag
    11701 tcagcggacg gaacgccgtg cccgcgttgc ccaaaaacaa atcggcagtg cggttgggga
    11761 agcgtccgcc tgtgccgtgc actttcagac ggtcttcggc aagatattcg atttcaacgc
    11821 cgagtttatc gagtgcttcg agcatacggt cggtatcgtc ggatttgagc agggaatgga
    11881 tttcacaagt attgtcggac aaggcggcga gcagcagggt gcggttgctg atgcttttgg
    11941 agccgggcag ggcgacggtg gaaggtttga gcgaggcggc agggaggcgg agggattcgg
    12001 tcatggcaaa acgtcaatat tataaagata aaaacagcct gcattatact ggtgcaaatg
    12061 ctgtatgaaa aatctcaggt ttggcatttt cggttttaaa gtccgtgaat gtggtttttt
    12121 atgccgaaaa ttgattattt ttaaattttt tgtttctaaa atttttttgc cggcatattt
    12181 tcggcttttg ttgcgggcag gtggcgtttg cggacggtac ggtacgattg ccaatttcat
    12241 agaatttggt agaatagccg ctgttcaacg acagacaagc cgccgatttt ccgggcggct
    12301 tgtattttta ttttaatatc cggacgcaca aaacaagacg gtacgcggta tgcttgctgc
    12361 cgcaaaacgg tgtgccggaa tatggagaaa aaagaccgat gcaaaaaatc cccctgaccg
    12421 tacgcggtgc ggaattgctg aaacaggaat tgcagcagct caaaagcgtg gcgcgtcccg
    12481 aagtgatcga agcgattgcc gaagcccgtt cgcacggcga tttgtccgaa aacgccgaat
    12541 acgaagccgc caaagaacgc caaggcttta tcgagggccg catttccgag ctggaacaca
    12601 aactttccgt tgcccacatc atcaatccga ccgaaatcca cgccgaaggc aaaatcgtgt
    12661 tcggtacgac ggttacgctg gaagatttgg aaacggaaga acacgttacc tatcaaattg
    12721 tcggcgaaga cgaagccgac atcaaacagg gcaaaatcta tgtcggctca ccgattgccc
    12781 gcgccttaat cggcaaggaa gagggcgata cggcggaagt ccaagccccg ggcggcgtgc
    12841 gcgaatacga cattatcgaa gtccgatata tttgattcgg cttgatttcg atacacccga
    12901 cacacgcagg aaattatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac
    12961 agtacagata gtacggaacc gattcacttg gtgcttcagc accttagaga atcgttctct
    13021 ttgagctaag gcgagacaac cccgtactgg tttttgttca tccactataa cagcaaccct
    13081 gtcgccgtca ttcccgcaaa agcgggaatc taggacgcag ggttaagaaa acctgcatcc
    13141 cgtcattccc tcaaa
//
LOCUS       DBBZXW010000048        13024 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.048, whole genome shotgun sequence.
ACCESSION   DBBZXW010000048 DBBZXW010000000
VERSION     DBBZXW010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13024
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.048"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            45..458
                     /locus_tag="ACJJD2_001236"
     CDS             45..458
                     /locus_tag="ACJJD2_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HGG7579779.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            504..1133
                     /gene="nth"
                     /locus_tag="ACJJD2_001237"
     CDS             504..1133
                     /gene="nth"
                     /locus_tag="ACJJD2_001237"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HGG7579780.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1271..2770
                     /locus_tag="ACJJD2_001238"
     CDS             1271..2770
                     /locus_tag="ACJJD2_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HGG7579781.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGKEITVAVKLGN
                     ASEQTGSSSEPDKAPYAEHQSGTFSVESAGITLQTHTDSSGGRLVVVRVSGAAERAGL
                     RRGDEILAVGQVPVNDEDGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            2973..4493
                     /locus_tag="ACJJD2_001239"
     CDS             2973..4493
                     /locus_tag="ACJJD2_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HGG7579782.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4550..5635
                     /gene="nagZ"
                     /locus_tag="ACJJD2_001240"
     CDS             4550..5635
                     /gene="nagZ"
                     /locus_tag="ACJJD2_001240"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HGG7579783.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTGEERQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQEAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5716..5792
                     /locus_tag="ACJJD2_001241"
     tRNA            5716..5792
                     /locus_tag="ACJJD2_001241"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5750..5752,aa:Pro,seq:cgg)
     gene            complement(6313..6951)
                     /locus_tag="ACJJD2_001242"
     CDS             complement(6313..6951)
                     /locus_tag="ACJJD2_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HGG7579784.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGRLKAYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYENSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
     gene            complement(6948..7319)
                     /locus_tag="ACJJD2_001243"
     CDS             complement(6948..7319)
                     /locus_tag="ACJJD2_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HGG7579785.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(7588..8010)
                     /gene="queD"
                     /locus_tag="ACJJD2_001244"
     CDS             complement(7588..8010)
                     /gene="queD"
                     /locus_tag="ACJJD2_001244"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HGG7579786.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDLVRGG
                     PKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(8017..8532)
                     /locus_tag="ACJJD2_001245"
     CDS             complement(8017..8532)
                     /locus_tag="ACJJD2_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HGG7579787.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAIPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSEMPKTEMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFTAATPAEAKQKALQTLLTDHVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(8560..9219)
                     /gene="queC"
                     /locus_tag="ACJJD2_001246"
     CDS             complement(8560..9219)
                     /gene="queC"
                     /locus_tag="ACJJD2_001246"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HGG7579788.1"
                     /translation="MSNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGIKQTVLDLSLMRQITHNALMDDTAAIETAGNGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            complement(9423..9609)
                     /locus_tag="ACJJD2_001247"
                     /pseudo
     CDS             complement(9423..9609)
                     /locus_tag="ACJJD2_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            9764..10990
                     /locus_tag="ACJJD2_001248"
     CDS             9764..10990
                     /locus_tag="ACJJD2_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HGG7579789.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(11011..11347)
                     /locus_tag="ACJJD2_001249"
                     /pseudo
     CDS             complement(11011..11347)
                     /locus_tag="ACJJD2_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(11372..11506)
                     /locus_tag="ACJJD2_001250"
                     /pseudo
     CDS             complement(11372..11506)
                     /locus_tag="ACJJD2_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(11517..11963)
                     /locus_tag="ACJJD2_001251"
     CDS             complement(11517..11963)
                     /locus_tag="ACJJD2_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579790.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNI"
     gene            complement(12528..12731)
                     /locus_tag="ACJJD2_001252"
     CDS             complement(12528..12731)
                     /locus_tag="ACJJD2_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579791.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
BASE COUNT         3029 a         3466 c         3292 g         3237 t
ORIGIN      
        1 cgtacaatcc gtcgccgatt tttgcctgtt tgagactgtt tgcaatgatg cccgcctacg
       61 cctacgccgc gctcgccttt tccgccttca cttccgccac cctcctgccc ggcacatccg
      121 aagccgcctt tgccctgttc gtccgccgct ttcccgaaca cgcatacggc gcgttgctgt
      181 gcgccggcct tgccaacgga ttgggcagta tggtttccta ttggatggga cgtttgctgc
      241 cttcccgaaa aatgccgtct gaaaaaacac tgaatctgat gcggcgtttc ggtatttggc
      301 tgcttccgtt tgcctggctg cccgtcgtcg gcgacgcact gccgcttgcc gccggctggc
      361 tgcggttgaa tccgtggaca agcgggctga tgctggttat cggcaaaacg gcgcgttacg
      421 ccttcattct gtggggaatg caatattacg ccgcctgaac cgtgcgttat aatgccgacc
      481 gcacaaaccg actgcacaaa aaaatgaaca gacacatccg ccaagaaatt ttcgaacgct
      541 tccgcgccgc caacccccat ccgaccaccg agctgaattt caactcccct ttcgagcttt
      601 taattgccgt tctgctttcg gcgcaggcga ccgatgtcgg cgtaaacaag gcgacggcga
      661 agctgtttcc ggttgccgat acgccgcagg cgatgctgga tttgggtttg gacggcgtga
      721 tggaatacac gaaaaccatc gggctgtata aaaccaagtc caagcacatc atgcaaacct
      781 gccgcatcct gctggaaaaa tacaacggcg aagtgccgga agaccgcgag gctttggaat
      841 cgttgcctgg cgtggggcgc aaaacggcaa acgtggtatt gaacacagcg ttcggacacc
      901 ccgttatggc ggtcgatacg catattttcc gcgtgtccaa ccgaaccaaa atcgcccccg
      961 ggaaagatgt gcgcgaagtc gaagacaaac tgatgcgctt cattcctaaa gaatttctga
     1021 tggacgcgca ccactggctg attttgcacg gacgctacac ctgcaaggca ctcaaaccgc
     1081 aatgccaaac ctgcatcatc aacgatttgt gcgaatatcc cgccaaagcc tgaccgccgc
     1141 cgcccttcaa aatgaaacgc ttgaaaattc ggacggacgt tgtagaattt caacctatgc
     1201 cgtctgaagc cgacaaaatg cgcttcagac ggcattaaag ccggtaccgg catccgacaa
     1261 aggacaaaac gtgttcaaaa aataccaata cctcgctttg gcagcactgt gtgccgcctc
     1321 gctggcaggc tgcgacaaag ccggcagctt tttcggtgcg gacaaaaaag aagcatcttt
     1381 cgtagaacgc atcgaacaca ccaaagacga cggcagcgtc agtatgctgc tgcccgactt
     1441 tgtccaactg gttcaaagcg aaggcccggc agtcgtcaat attcaggcag cccccgcccc
     1501 gcgcacccaa aacggcagcg gcaatgccga aaccgattcc gacccgcttg ccgacagcga
     1561 cccgttctac gaatttttca aacgcctcgt cccgaatatg cccgaaatcc cccaagaaga
     1621 agcagatgac ggcggattga acttcggttc gggcttcatc atcagcaaag acggctatat
     1681 tctgaccaat acgcacgtcg ttaccggcat gggcagtatc aaagtcctgc tcaacgacaa
     1741 gcgcgaatat accgccaaac tcatcggttc ggatgtccaa tccgatgtcg cccttctgaa
     1801 aatcgacgca acggaagagc tgcccgtcgt caaaatcggc aatcccaaag atttgaaacc
     1861 gggcgaatgg gtcgccgcca tcggcgcgcc cttcggcttc gacaacagcg tgaccgccgg
     1921 catcgtgtcc gccaaaggca gaagcctgcc caacgaaagc tacacaccct tcatccaaac
     1981 cgacgttgcc atcaatccgg gcaactccgg cggcccgctg ttcaacctga aaggacaggt
     2041 cgtcggcatc aactcgcaaa tatacagccg cagcggcgga ttcatgggca tttccttcgc
     2101 catcccgatt gacgttgcca tgaatgtcgc cgaacagctg aaaaacaccg gcaaagtcca
     2161 acgcggacaa ctgggcgtga ttattcaaga agtatcctac ggtttggcac aatcgttcgg
     2221 tttggacaaa gccggcggcg cactgattgc caaaatcctg cccggcagcc ccgcagaacg
     2281 tgccggcctg caggcgggcg acatcgtcct cagcctcgac ggcggagaaa tacgttcttc
     2341 cggcgacctt cccgttatgg tcggcgccat tacgccggga aaagaagtca gcctcggcgt
     2401 atggcgcaaa ggtaaggaaa tcaccgttgc cgtcaaactg ggcaatgctt ccgaacaaac
     2461 cggttcctcg tccgagccgg acaaagcccc ttatgccgaa caccaatccg gtacgttctc
     2521 ggtcgaatcc gcaggcatta cccttcagac acataccgac agcagcggcg gacggcttgt
     2581 cgtcgtgcgg gtttcggggg cggcagaacg cgcaggcttg aggcgcggcg acgaaatcct
     2641 tgccgtcggg caagtccccg tcaatgacga agacggtttc cgcaaagcta tggacaaggc
     2701 aggcaaaaac gtccccctgc tggtcatgcg ccgtggcaac acgctgttca tcgcattaaa
     2761 cctgcaataa cacacataat ttaaccaaaa tattttttaa atgataaaat gcccgtcaat
     2821 accgattaac gggcatttta cagaaatcag ttggttgatt ttaaacaaat attttttacg
     2881 acaaaaaata tttccgccca ttttgccaac aaaacccaaa ccggaggcgg acagatacgc
     2941 tcccatccgg acgcttaaca cccccgtaaa ccatgcagct gatcgactat tcacattcat
     3001 ttttctcggt tgtgccaccc tttttggcac tggcacttgc cgtcattacc cgccgcgtac
     3061 tgctgtcttt aggcatcggt attctggtcg gcgttgcctt tttggtcggc ggcaaccccg
     3121 tcgacggtct gacacacctg aaagacatgg tcgtcggctt ggcttggtca gacggcgatt
     3181 ggtcgctggg caaaccaaaa atcttggttt tcctgatact tttgggtatt tttacttccc
     3241 tgctgaccta ctccggcagc aatcaggcgt ttgccgactg ggcaaaacgg cacattaaaa
     3301 accggcgcgg cgcgaaaatg ctgaccgcct gcctcgtgtt cgtaaccttt atcgacgact
     3361 atttccacag tctcgccgtc ggtgcgattg cccgccccgt taccgacaag tttaaagttt
     3421 cccgcgccaa actcgcctac atcctcgact ccactgccgc gcctatgtgc gtgctgatgc
     3481 ccgtttcaag ctggggcgcg tcgattatcg ccacgcttgc cggactgctc gttacctaca
     3541 aaatcaccga atacacgccg atggggacgt ttgtcgccat gagcctgatg aactattacg
     3601 cactgtttgc cctgattatg gtgttcgtcg tcgcatggtt ctccttcgac atcggctcga
     3661 tggcgcgttt cgaacaagcc gcgttgaacg aagcccacga tgaaactgcc gcttcagacg
     3721 ctaccaaagg tcgtgtttac gcactgatta ttcccgtttt ggccttaatc gcctcaacgg
     3781 tttccgccat gatctacacc ggtgcacagg caagcgaaac cttcagcatt ttgggtgcat
     3841 ttgaaaatac ggacgtgaac acttcgctgg tattcggcgg cacttgcggc gtgcttgccg
     3901 tcgtcctctg cacgctcggc acgattaaaa ccgccgatta tcccaaagcc gtttggcagg
     3961 gtgcgaaatc catgttcggc gcaatcgcca ttttaatcct tgcctggctc atcagtacgg
     4021 ttgtcggcga aatgcacacg ggcgactacc tctccacgct ggttgcgggc aacatccatc
     4081 ccggcttcct gcccgtcatc cttttcctgc tcgccagcgt gatggcgttt gccacaggca
     4141 caagctgggg gacgttcggc atcatgctgc cgattgccgc cgccatggcg gtcaaagtcg
     4201 aacccgcgct gattatcccg tgtatgtccg cagtaatggc gggggcggta tgcggcgacc
     4261 actgctcgcc catttccgac acgaccatcc tgtcgtccac cggcgcgcgc tgcaaccaca
     4321 tcgaccacgt tacctcgcaa ctgccttacg ccttaaccgt tgccgccgcc gccgcatcgg
     4381 gctacctcgc attgggtctg acaaaatccg cgctgttggg ctttggcacg acaggcattg
     4441 tattggcggt gctgattttt ctgttgaaag ataaaaaacg cgccaacgcc tgaccccttt
     4501 ccctgttcag acggcatatg ccgtctgaag ctttttggag caaaccgcaa tgaccgtccc
     4561 ccatattccg cgcggccccg tcatggcaga cattgccgcc ttccgcctga ccggagaaga
     4621 aaggcaacgc ctgctcgacc ccgcaatcgg cggcatcatc ctcttccgcc gcaacttcca
     4681 aaacatcgaa caactcaaaa cactcaccgc cgaaatcaaa gccctgcgca cacccgaact
     4741 cattatcgcc gtcgatcacg aaggcggcag ggtgcaacgt ttcatcgaag gcttcacccg
     4801 cctgcccgca atgagtacgc tcggcgagat ttgggacaaa gacggcgcgt ccgccgccga
     4861 aaccgccgcc ggacaagtcg gccgggtttt ggcaaccgag ctttccgcct gcggcatcga
     4921 tttgtccttc acgcccgtct tagatttgga ctggggaaac tgccccgtca tcggcaaccg
     4981 cagtttccac cacaatcccg aagcggtcgc ccacctcgcc ctcgcccttc aaaaaggttt
     5041 ggcaaaaggc ggtatgaaat cctgcggcaa acattttccc ggacacggat ttgtcgaagg
     5101 agacagccat ctggtcttgc cggaagacag gcgcagcctg tccgaactcg aagccgccga
     5161 cctcgccccc ttccacatta tgagccgcga aggtatggcg gcggttatgc ccgcccacgt
     5221 cgtttatcca caagtggaca caaagcccgc agggttttcc gaaatctggc tcaaacaaat
     5281 tttgcgccgc gacatcgggt ttaaaggcgt aattttctcg gatgatttga ctatggaggg
     5341 cgcgtgcggg gcaggcggca tcaaagaacg cgcccgcatt tcctttgagg caggttgcga
     5401 catcgtcctc gtctgcaacc gtcccgacct tgtggacgaa ctgcgcgaag atttccgcat
     5461 tcctgacaat cccgctttgg cgcaacgttg gcaatacatg gccaacacgc tcggcagtgc
     5521 cgccgcgcaa gccgttatgc agacggcgga tttccaagag gcgcaagcct ttgttgccgg
     5581 ccttgcctcg ccgcaagaca cggcgggcgg cgtaaaagtc ggcgaagcct tttaaatccg
     5641 cccgacacgc tgcaaaaagg caaaacggta taggcacgcc gtattttttg cgctataatc
     5701 acgccttact taattcggaa tgtagcgcag cccggtagcg cacttcgttc gggacgaagg
     5761 ggtcggaggt tcgaatcctc tcattccgac caaatccaaa ccgcctcggc atccattgcc
     5821 ggagcggttt ttccttttgg cggcaacaga aaaatgccgt ctgaaacaga atgagacctt
     5881 tgcaataaca taggttacta aaattttatg ctcaatctca ttttcaaaat gcaaaacttt
     5941 tctgattttt cctacttttt gctcaatatt aggaaggttt taggcaattg aaaatttttt
     6001 ggcgcatttt tatgcgtcaa atttcgttaa cagactattt ttgcaaaggt ctcagaatgc
     6061 tgtttcagac ggcatttcgt tttccctaac cctgccattt gcgcgcactg gcacagagta
     6121 tcggcaaggt tcaaaagacc atcggaattt aggaagccgg gcttgtaccc aacggcggca
     6181 tcttattcag taaggttccg cctcaatcag gcagcggaaa tgtgggcagt ttcacgcgga
     6241 agcggcacac ttttcccata tgttagacat cggcaaaacg gtacgccggc cctttgagtt
     6301 acactgctta aactactcta ttcccgccca tttgtgcgtc tgcacgctca actgccaatg
     6361 caccggcgcg tcggggcgac tgtttaaaat accgatttgg cggatggtgt cgtagatgtt
     6421 catcgcaccg tcttgttcgc agggcgaaag gtagtaatga tgcgcgcgga ttttacgttc
     6481 catgttttcg cagaacgcaa ggacatcacc atcggcaaca atccgcactt cgtcggctgt
     6541 ttcgatacag ctattttcat atttggcggc gtagcaggct ttggggctgg tggcgacata
     6601 gtcgatttgc ggcggcgcgg gattgagtcc gttggtttcg atacagagga aataaccttc
     6661 cgccttgagc atgtccagca gcatatcgag atgcggctgg atggtcggtt cgccgccggt
     6721 gatgatgatg ttgcgggcgg cataggcttt cagacggcct aagatgtcgg acaggctcat
     6781 catgccgaat gtcaaataat cggtatcaca ccagccgcag gcgaggttgc atttgcccaa
     6841 gcggacgaaa acggcgggca tgcccgtgtt ccagccttcg ccttgcaggc tttcaaagat
     6901 ttcgacgatg cggtattggg gattttcggg ggcaacattg atttttttca taccgccaac
     6961 accgccgccg ctgccaaaaa tgcgggcaaa ccttgtttga cgagtatgcc tttgttgccg
     7021 gaagagaacg cgccccacgc ggcggcaatc aggacgaagc cgagaaacag taccgttgcg
     7081 ccgtacaccg cgttatccgg agcggcaaac cgcgaccaca ccagcccgat gccgagaaag
     7141 ccgttataca gcccttggtt gccgaacagg gtctgcacgc gcttttgttc cataaattca
     7201 taaggcagct tgaatatttc cgccgctttt tcgctgggaa tctgcgtcat ttcaagccag
     7261 gcgatgtaga aatgttcggc ggtgacaagg aggactaaga gggtggagag aagtttcatg
     7321 ggtattcctt ttaatgggtg tatttgatat ggagggtcgt ctgaaaaaac ggggaatccg
     7381 tacaggagaa aaaaccgttt tacggtaaat tcaaataagg acgctctaaa ccgtcctttc
     7441 cgcgcaggcg ggaatccaaa gatttggaat tgctgcaatt tttaaatatt cctgaaaaac
     7501 caaggtctgg attcccgcct gcgcgggaat gacgcggttg ggcatgtctt attggaattt
     7561 actatatcga tacgttcaag atattcccta ctccccttca tactccgcac acgatgtcgg
     7621 cgtttcccac aatttgacgc ggcacacgtt cagccccgcg tttttcagac ggtcgtacat
     7681 ttcgaccgcc atattttcgg cagtggtgcg gcagggcagg cgcagggttt tcatgttcca
     7741 gccttccaag agtgcggcga tttgagattc gcgcccgttg ccgccgtggt agatgaaggc
     7801 gtggtcgaag gggtcggtaa tgtgttgttt gacaatggct ttcaagtcgg taaagtccat
     7861 caccataccg tctttcggcc cgcctctgac gaggtcgtct gaaacggtga tttcgagttt
     7921 gtaggtatgc ccgtgcaggt tttggcattt gccgtcatgc ccgtcgagca tatgagagga
     7981 gtcgaaggtg aagattttgg tgattttcat gggttctcaa atgggcaaat agccttgaaa
     8041 gccgatttcg gcgggtttgc cgtgcggatt cggggtcagg cggatatgga aattgccgat
     8101 gcggtcgagc gcaagcaggt tgtccacgtc ttttaagttg tctttatgtt gctgaacatg
     8161 gtcggtcaac agggtttgca gggctttttg tttggcttcg gcaggcgtgg cggcggtgaa
     8221 cagcccgaac gcgtgcgcct cggcaagctg ccccgcgcga taaccgccga cattggcaaa
     8281 atacaggcgc ggggcgtgtt cagacggcat ttccgttttg ggcatttcgg atacggcgat
     8341 gtcgtaaccg tccgcccatt cgacaacctg ccaaccgtcg atgtggattt tgtccgcatc
     8401 gccgaaccat gcggctttga gtgcggggat ggcttcgcgg tagtcgtcgc acacggcaaa
     8461 ttggatgtcg tgcacttcga tattcgacct gccggcattg ccgccgaggt aaaacatatg
     8521 gagcttgggc atatcgtatt ccttatggtt tgcgcgtgtt cagacggcct ttttactttc
     8581 cagatattcc gccagcccgc gttcgcgcaa gatacagctc gggcattcgc ggcagccgcc
     8641 gacgatgccg ttatagcagg tgtgggtttg ctcgcggata tagtccagcg cgcccatttc
     8701 gtccgccaac gcccaagttt gcgccttggt cagatacatc agcggcgtgt ggatttgaaa
     8761 atcatagtcc atcgccaaat taagggtaac gttcatcgat ttgacaaaca cgtcgcggca
     8821 gtcgggatag ccggagaagt cggtttcgca cacgcccgcg atgatgtgcc gtatcccctg
     8881 ccctttggcg taaatcgcgg cgtaaagcag gaaaagcgcg ttgcgcccgt ccacaaaggt
     8941 attgggaaca ccgttgccgg cggtttcgat ggcggcggta tcgtccatca gggcattgtg
     9001 cgtaatctgc cgcatcaggc tcaagtcgag tacggtttgt ttgatgccca aatcctgcgc
     9061 aatccagcgg gcgcgttcca gctcgacggc atggcgttgc ccgtattgga aagtgatggc
     9121 ttggacgttt tcgcgcccgt aggtttggat tgcctgaatc aggcaggtgg tcgaatcctg
     9181 accgcccgaa aagatgacca aggcttgttg gtttgacata tcgaatccta gttttggtaa
     9241 cgcgggaggt ttgcgaaccg cgaagttgaa cagtaaagat gcggattata caggcaaacg
     9301 cgttcagacg gcatctgaac gccatgccgt ctgaacacgc ggcttatgcc gacttgacgg
     9361 cgagttccgc caagcgtttg ctttgtgcga aggcgatatt gttttcttcg gcggtcagga
     9421 cgggagccgc tgtcgggaat atcttttttg acggcttcgc agacggcgga gactttgggg
     9481 acggtgcgca atacggcttc gcaaccttca acgctgtcga tgccgcgagc gattcggcgg
     9541 gcgggattgc gggggctgcc gttttgggaa tagtagagga cgaggatttt gagggggatt
     9601 tgggttcatg ggcggattcc gttaaaatgg ttcggtcttc aaacggcata acagttgttc
     9661 cgatgccgtc tgaaacagcc gcagttcagg catttgttcc tgacggcaaa cttggctata
     9721 acatcgggca tcaatgccca acttactgac cgggcaagaa attatgacct ttttacaacg
     9781 tttgcaaggt ttggcagaca ataaaatctg tgcgtttgca tggttcgtcg tccgccgctt
     9841 tgatgaagaa cgcgtaccgc aggcggcggc aagcatgacg tttacgacgc tgctggcact
     9901 cgtccccgtg ctgaccgtga tggtggcggt cgcttcgatt ttccccgtgt tcgaccgctg
     9961 gtcggattcg ttcgtctcct tcgtcaacca aaccattgtg ccgcagggcg cggacatggt
    10021 gttcgactat atcaatgcgt tccgcgagca ggcgaaccgg ctgacggcaa tcggcagcgt
    10081 gatgctggtc gttacctcgc tgatgctgat tcggacgata gacaatacgt tcaaccgcat
    10141 ctggcgggtc aattcccagc gtccgtggat gatgcagttt ctcgtctatt gggctttact
    10201 gacgttcggg ccgctgtctt tgggcgtggg catttccttt atggtcggct cggtacagga
    10261 tgccgcgctt gcctcaggtg cgccgcagtg gtcgggcgcg ttgcgaacgg cggcgacgct
    10321 gaccttcatg acgcttttgc tgtgggggct gtaccgcttc gtgccaaacc gcttcgttcc
    10381 cgcgcggcag gcgtttgtcg gggctttggc aacagcgttt tgtctggaaa ccgcgcgctc
    10441 cctcttcact tggtatatgg gcaatttcga cggctaccgc tcgatttacg gcgcgtttgc
    10501 cgccgtgccg ttttttctgt tgtggctgaa cctgttgtgg acgctggtct tgggcggcgc
    10561 ggtgctgact tcttcactct cctactggca gggagaagcg ttccgcaggg gcttcgactc
    10621 gcgcggacgg tttgacgacg tgttgaaaat cctgctgctt ctggatgcgg cgcaaaaaga
    10681 aggcaaagcc ttgcctgttc aggagttcag acggcatatc aatatgggct acgacgagtt
    10741 gggcgagctt ttggaaaagc tggcgcggta cggctatatc tattccggca gacagggttg
    10801 ggtgttgaaa acgggggcgg attcgattga gttgaacgaa ctcttcaagc tcttcgttta
    10861 ccgtccgttg cctgtggaaa gggatcatgt gaaccaagct gtcgatgcag taatgatgcc
    10921 gtgtttgcag actttgaaca tgacgctggc agagtttgac gctcaggcga aaaaacagca
    10981 gcaatcttga gtatttttga aactgtattt ttatcctaaa gacattttcc tatctgctga
    11041 ttccaccgtt tcctttctgt gtgccgccat aatttttatg atagacaagc cattcaagtt
    11101 tgcattgact gctttttcat tggcaatatc caaatggctg gtcgctgcat ctaaaaatag
    11161 gattttcggt tcgcaatatt aaggcccgcg ccaatacgat gcgttgtttt tgtccgcctg
    11221 acagtgcgct gcccatatcg ccgatcaagg tttcatagcc cataggcatg gcggagattt
    11281 cttcgtgaat catagcaagg caggcgcaat gttcgatttt tcctctatcc ggttccgtat
    11341 cgaaaaaaca aggggctgta ctagattagc cctaaattcc acaccaatcc cgcaggattt
    11401 taagctgttg agacggtgtg ccgaagttaa atcgaaattc gcattctttc aagaacagcg
    11461 ggaaagattt acgatcgatt ccgttgtatt ttcgcaagac gcgtttagtc tagagtctat
    11521 atattacatt tatttttagg gtctgctagc caatttcttg ttcccttcat tattttatct
    11581 tctgaaagaa aattattttt ttccatgcta ttaatattaa tgatatgatt tttatttaaa
    11641 ataatttttc catataaaat ttccggtttg taatagcaag agtctgaagc aaatccttgc
    11701 ccgtcaatat aagaaaaata aatgttatca tcctccttat aatattctaa aaccaatccg
    11761 gatattattt tatcaaaatt cccttcattt ccatctttca tgactaaaat ataattagca
    11821 ggccaacctt tatcgtaaac atattcaaac tgatagttcc cgaaactctc gatatccgaa
    11881 ctaaaaaaga agaaaagcaa attaatagcc aatacaaaaa caaataagaa caaaaatagc
    11941 aaaattttca acttagttaa caatatttac ctctccttta aattcaatcc tgaaaggtac
    12001 cccttaccct gggctaccaa ttatagtttc catatttcta aatattgttt ttacattact
    12061 tttttctccc cccaaaggaa tgcattttaa aatcatgctt ttcaggtgct aatcgatact
    12121 taccattaac atctttaatc acagatatat ttccatgtat agcccaacgt gaaaaatctg
    12181 agtattatat acagttatac cttactgaaa caaagctagc tgtacatatc tgtaccatat
    12241 ttttactaca aacaaaaaat atttataatt attaaggata agataaaaac ccccaacgcc
    12301 agattaattc ttaataattt caaataaaaa atatttgaga ttttttcttt tccaaataat
    12361 atattgaaat atttaaagtt aaggtagctt gatttaatta gaaaatcaaa aaaaaccatt
    12421 aattaatttt tcttctttaa atattttata tgatattata aaattaaata acattgcgaa
    12481 aacatatgaa atcatcaaaa taccaaatat atagtgggaa tgcattatta tttagctcct
    12541 tcttttggct ctgacaaatt gacagtccat tgatatccaa tgcttgcatt tgcaattgct
    12601 gacgcacctg cccctgtttt ccctgttagt atcaatggtt cttttcttgc aagatgtgca
    12661 cctgcacaac cacctaatac taaaccacca cctattgtaa atccttcctg ttgtatctct
    12721 aatgataaca ttttcttctt gtgccgccct taatacagat tgtggaattg gattgacctg
    12781 agcaggaact tctaaaataa gttttccttc aagctgtctt cctcttagca gattaggtgt
    12841 acttggaaca ttggaaatga caaagtgagt acgcaaacca cctgaaggcg atgtgtttga
    12901 acctgttgaa agcggccaac aggctaaatg cgcccgctgc cgcctaaaag gcagcccgga
    12961 tgcctgatta tcgggtgtcc gaggaggatt aagggggtat ttgggtaaaa ttaggaggta
    13021 tttg
//
LOCUS       DBBZXW010000049        12934 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.049, whole genome shotgun sequence.
ACCESSION   DBBZXW010000049 DBBZXW010000000
VERSION     DBBZXW010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12934
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.049"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            23..1126
                     /gene="dnaN"
                     /locus_tag="ACJJD2_001253"
     CDS             23..1126
                     /gene="dnaN"
                     /locus_tag="ACJJD2_001253"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HGG7579792.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(1095..1364)
                     /locus_tag="ACJJD2_001254"
     CDS             complement(1095..1364)
                     /locus_tag="ACJJD2_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579793.1"
                     /translation="MPSETFPFQTAWFYSNLNRADWNQKHTFAIPAQALPLYAPNPNP
                     PHSRRHCLSDSRTKPRIRLHGSGHISNTGIVLRKTVKSASASQYI"
     gene            complement(1389..3446)
                     /gene="ppk1"
                     /locus_tag="ACJJD2_001255"
     CDS             complement(1389..3446)
                     /gene="ppk1"
                     /locus_tag="ACJJD2_001255"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HGG7579794.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGAQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLNVDEEDVQNLRAAVQNELHDREYGDGVRLEVADTCPARIRD
                     FLLSQFRLTADELYQVKGPVNLVRLNAVPDLVNRPDLKFPPHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPAVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKIHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIGRIRQETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(3615..4058)
                     /locus_tag="ACJJD2_001256"
     CDS             complement(3615..4058)
                     /locus_tag="ACJJD2_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HGG7579795.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAINAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(4065..4580)
                     /locus_tag="ACJJD2_001257"
     CDS             complement(4065..4580)
                     /locus_tag="ACJJD2_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HGG7579796.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            4850..7480
                     /gene="leuS"
                     /locus_tag="ACJJD2_001258"
     CDS             4850..7480
                     /gene="leuS"
                     /locus_tag="ACJJD2_001258"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HGG7579797.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQEFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFATKYNLPKKQVIAVGDNAFDENQWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            7710..8501
                     /locus_tag="ACJJD2_001259"
     CDS             7710..8501
                     /locus_tag="ACJJD2_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DpnI domain-containing protein"
                     /protein_id="HGG7579798.1"
                     /translation="MNLFFDTKLGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCSNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKGWLLAVMKCIDQLPEEFTLSQIYEFENKLSIQ
                     FPQNNHIRDKIRQQLQILRDQNTIEFIGRGLYKKIDKLPPTSKAF"
     gene            8631..8762
                     /locus_tag="ACJJD2_001260"
     CDS             8631..8762
                     /locus_tag="ACJJD2_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl-tRNA synthetase"
                     /protein_id="HGG7579799.1"
                     /translation="MRDFDKLAEEAAEHAAEGAVKFIDGKPAKKIIAVPGRLANIVV"
     gene            8989..9723
                     /locus_tag="ACJJD2_001261"
     CDS             8989..9723
                     /locus_tag="ACJJD2_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HGG7579800.1"
                     /translation="MNAAAAKDYMKTVELNKSAGNVDTTSRTARRVQAVFRRMLPYAD
                     AANNTGHRFDWKMTVFKNDELNAWAMPGGKMAFYTGIVDKLKLTDDEIAAIMGHEMTH
                     ALHEHGKNKVGQQILTNTAAQIGTQIILDKKPDTNPELVGLGMDILGTYGLTLPYSRS
                     LEEEADEGGMMLMAQAGYHPAAAVRVWEKMNQENDQNGFIYAITSTHPTNNARIENLK
                     RLLPTVMPVYEQSVRNKGRVNKKRRR"
     gene            complement(10106..10417)
                     /locus_tag="ACJJD2_001262"
     CDS             complement(10106..10417)
                     /locus_tag="ACJJD2_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7579801.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(10414..10782)
                     /locus_tag="ACJJD2_001263"
     CDS             complement(10414..10782)
                     /locus_tag="ACJJD2_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HGG7579802.1"
                     /translation="MRIFKNQWIVKFAKKHKINDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
     gene            complement(11592..11677)
                     /locus_tag="ACJJD2_001264"
     tRNA            complement(11592..11677)
                     /locus_tag="ACJJD2_001264"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11641..11643),aa:Leu,seq:gag)
     gene            complement(11691..12041)
                     /gene="secG"
                     /locus_tag="ACJJD2_001265"
     CDS             complement(11691..12041)
                     /gene="secG"
                     /locus_tag="ACJJD2_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HGG7579803.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(12048..12821)
                     /gene="tpiA"
                     /locus_tag="ACJJD2_001266"
     CDS             complement(12048..12821)
                     /gene="tpiA"
                     /locus_tag="ACJJD2_001266"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HGG7579804.1"
                     /translation="MYRQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
BASE COUNT         2961 a         3337 c         3548 g         3088 t
ORIGIN      
        1 aaaccgattt aaaggagcga acatgttgat tttacaagcc gaacgcgaca gcctgctcaa
       61 gccgctgcaa gccgttaccg gcatcgtcga acgccgccac accctgccca tcctgtccaa
      121 cgtcctgatt gagggaaaag gcggtcagac caaactcttg gcaaccgatt tggaaatcca
      181 aatcgacact gcgggtcccg agggcggcgc ggacgacttc cgcatcacca ccaatgccaa
      241 gaaatttcag gacattttgc gcgcgctgcc tgccggtgcg ctggtgtcgc tggattggga
      301 cgacagccgt ctgacgctga aggcgggcaa atcgcgtttt gccctgcaga ccctgcctgc
      361 cgccgatttt ccgatgatga atgtcggcga ggacatcagc gcgactttct cgctggagca
      421 ggagcgtttc aaaaccatgc tgtcgcaagt gcagtacagc atggcggtgc aggacatccg
      481 ctattatctc aacggtctgc tgatgcaggt tgagggcagc cagttgcgcc ttgtggcgac
      541 cgacggacac cgccttgcct atgcagcctg cgcgattgat gcggatttgc cgcgcgccga
      601 agtgattttg ccgcgcaaaa cggtgctgga actgttcaaa ctgttgaaca accccgacga
      661 tccgattcaa atcgagctgc tggacaagca ggtgcgtttc caatgcaacg gcacgaccat
      721 cgtcagcaag gttatcgacg gcaaattccc cgatttcaac cgcgtcatcc ctttggacaa
      781 cgacaagatt ttcgttttgt cccgtgccga acttttgggc gcgctggaac gtgtgtccat
      841 tcttgccaac gaaaaattcc gtggcgcgcg cctgttcctg caatccggcc tgttgagcgt
      901 cgtgtgcagc aacaacgagc aggaagaagc gcgcgaagaa atcgagattg cctatcaggg
      961 cggcgaactc gaagtcggtt tcaatatcgg ctatctgatg gacgtgttgc gcaacatcca
     1021 ttccgacgat atgcagcttg ccttcggcga tgccaaccgc tcgacgctgt ttaccgtgcc
     1081 gaacaatccg aatttcaaat atattgtgat gccgatgcgg atttgacggt tttccggagc
     1141 acgatgcccg tattggagat atgccccgaa ccgtgcagac ggattcgggg ttttgttcgg
     1201 ctgtcggaaa ggcaatgccg tctggaatgc ggcggattgg ggttgggagc gtatagggga
     1261 agtgcttgtg cgggaatggc gaaggtgtgt ttttgattcc agtccgccct gtttagattg
     1321 ctgtaaaacc atgccgtctg aaacggaaag gtttcagacg gcatggtttt tgattggggc
     1381 ggtgcgggtc agcctccgag cagtgtccac aaatcgtttt gcaggtcggc ttcgctttcg
     1441 ccctcggcag gcgcggcgcg gatatagccg ccgtcgggct gcatcagcca ggcgtgggtg
     1501 ttgtctgcca atgccatttc caaaccttcg cggatcacgc gttttttgag ttcgggcgcg
     1561 gtaatcggcg cggcggtttc gatgcggcgg aagaagttgc gccccatcca atccgcgctg
     1621 gaaataaagg tatcgtccgc gccgttgttg tggaagcaat acacgcgcgc gtgttcgagc
     1681 tgcctgccga cgatggagcg gacgcggatg ttttcggaca agcctttcac gccggggcgc
     1741 agagtgcaca taccgcgcac aatcaaatcg atttgcacgc ctgccgcgct tgcccgatac
     1801 agggcttcga tgacggtcgg ttcgatgagc gaattcatct tggcagtaat ccgtgccggc
     1861 ttgcctgctt tggcgtgttc ggtttcctgc ctgatgcgtc cgataaccat tttgtgcagg
     1921 gtaaacgggc tttgatagag cttgttcaga cggccgggtt tgcccaaacc tgtgatttcc
     1981 ataaacaatg tgttcacatc ggcggtgatt tgttcgtcgg cggtaatgat gccgaagtcg
     2041 gtgtagatgc gcgatgtgcc ttggtggtag ttgcccgtgc cgaggtgggc gtaacgcttg
     2101 agcacgccgt cttcgcggcg gatgaccagt gccatcttgg cgtggatttt gtagccgaac
     2161 acgccgtaca cgacgtgcgc gcccgcctct tcgagctgct tcgcccagtt gacgttgttg
     2221 gcttcgtcaa aacgcgccat cagttcgacg acgacggtta cttgtttgcc ggcgagtgcc
     2281 gccttcatca gggcgcggac gagttcggag cgcgtgccgg tgcggtaaat cgtcattttg
     2341 acggcaagca cggcggggtc ggcggcggct tcgcgcatca tttcgacaac ggggtcgaag
     2401 gattggtagg ggtggtgcag caggatgggc gattggcgca ccaaatcgaa tatggacgcg
     2461 gttttgccca aggctttcag cctgcccggc gtgtgcggcg ggaatttcaa atcggggcgg
     2521 ttgaccaaat cggggacggc gttgaggcgc acgaggttca cggggccttt gacttggtaa
     2581 agttcgtcgg cggtcagcct gaattgcgac agcaggaagt cgcggatgcg ggcgggacag
     2641 gtgtcggcga cttcgaggcg cacgccgtcg ccgtattcgc ggtcgtgcaa ctcgttttga
     2701 acggcggcgc ggaggttttg cacgtcttct tcatcgacgt tcaagtcgct gtcgcgcgtc
     2761 aggcggaact ggtggcagcc tttgacgttc atgcccggga agagtttgcc gacgtgggcg
     2821 tgcaggatgg aggagaggaa gacgaagccg tgtccgccgc cacacagttc ggacggcagg
     2881 ggaacaacgc gcggcaggat gcgcggtgcc tgcacaatcg ccatccccga aggcctgccg
     2941 aacgcgtccg tgccgtcgag ttcgacggcg aagttgagcg atttgttcag cggtcgcggg
     3001 aaggggtggg acgggtcgag tccgatgggg gtcaggatcg gcagcagttc gcggtcgaaa
     3061 tagtcttcga tccatttttt ctgcgcgccc gtccagttgc ggcggcggta aaaatggatg
     3121 ctttcccgcg ccaactcggg ctgaaggacg ttgttgaaca ggtcgtactg gtgccgtatc
     3181 agggagcgcg ccgcttcggt aacgtcggcg atggtttcag acggcatttt gccgttgtcc
     3241 agcctgcgcc gggggtgcag cttgttttca cgcttgagcc acgccatgcg gacttcgaaa
     3301 aactcgtcaa gattggacga cacgatgcac aggaagcgca ggcgttccaa aagggggacg
     3361 tttttgtctt ccgcctgtgc caacacgcgg cggttgaatg ccagcaggct tagttcgcgg
     3421 cagaggatgc ggttttgttc gggcataagg ttctcccaaa gatggttgtt gttcggtcgg
     3481 agcgggcagg caatgccgtc tgaaggcttg gcggcatctg cgccggtttc agacggcatg
     3541 acgtggcgga cagcctgttt caggcatcgg ggcaatgtga aaacagatac cggcgcgtgc
     3601 ggtatccgtc tgtttcaaat cacttccaac acaaaataat gacgcagttt ttcgtacacc
     3661 gcatcgctga cgttgatgca gccgttggtc ataatcctgt cggacacgga cggggaggcg
     3721 atgcgttcgt tccgcctttc cgacggtatc tgattccaaa cgcggtgcag ggcgaaaaga
     3781 aaatcaccct cctgcttgaa accgatgact tcgccgccgt atccaggctt gtcggtactg
     3841 ttcagcgtca gcccgaacgt ccccttgggc gtggcaacac cgatgaggac ggggtggcac
     3901 tgacggtcgt cagcgaaaca gagttccgct ttggatgtat cgacgatgac ttttttcttt
     3961 tggatatagg cattgatcgc atccggttgc ccctgtgcat atacgggggc aaccattgac
     4021 aggccgcata atatccctaa aaacaggcgg aacggcatgt cggattattg gcggatacgt
     4081 ttcggttttg ccggcacgat ttcgcggatg atgacttgcg gctcggcttt gggtgcgggc
     4141 ggcggacagg cggcatcttt cgggaagacg gggttccagt agaagctgcg ggcaaatttg
     4201 tctttatcga aaatcacttt gtattggcag gtagtaacat cttctacgcc ggaagtgttt
     4261 tcagggtcga tacctacgcc cggggtatgg aagtggaaca ggtaatccca ttcgcgcacg
     4321 ccgtacatac cttcgtcgta atgcgggcgg cccaggattt tgtagatgtc gtctttggtc
     4381 aggccggggc gcatctgatc cagttcgtca taagtcggga atgtgccgcg cttgttgtcg
     4441 agcgttacgg aatagggttt cgggaaaacc ggattgtcgg tcgtgccgtc ggctttgacg
     4501 ttgcttttgg ttgcgcaggc agacagaacg cccgccgcca atactgccaa gcccggtttg
     4561 acgatttgtt tgattttcat atgcagaatc ctcttttacc cgatgcccgt ctgccttttg
     4621 ttcggaagag ccgcatcagg agagttttaa acatttgatt ttggtttgta atattagcat
     4681 aaaaaacgtg cgtatcaata aacgcggtgt atttgtacgg catacggaat aatgcgcgtg
     4741 cgaatttacg catcctgccg gcaatctgcc gattcgccgc ttccggcaac ctgttataat
     4801 tgatgccgac tttatttttc caacgttttt aagcgaaaac agaatgacta tgcaagaaca
     4861 atatcaaccc gccgccatcg agcctgcggc gcagaaaaaa tgggacgacg cccgtatttt
     4921 caacgtctcc gaagacgctt ccaaacccaa atattattgc ctctccatgt tcccctatcc
     4981 cagcggcaag ctgcatatgg ggcatgtgcg caactacacc atcggcgatg tattgagccg
     5041 cttcaaactt ttaaacggct tcaacgtcat gcagcctatg ggttgggacg cgttcggcat
     5101 gccggcggaa aacgcggcga tgaaaaacaa cgtcgcccct gccgcttgga cgtacgataa
     5161 catcgaatac atgaaaaccc agctcaaaag cctgggtttt gcgattgact gggcgcgcga
     5221 aaccgcaacc tgcaaacccg aatactaccg ctgggaacaa tggctgttta ccaagctgtt
     5281 tgaaaaaggc atcgtctatc gcaaaaacgg cacggtaaac tgggatccgg tcgaccaaac
     5341 cgtccttgcc aacgagcaag tcatcgacgg acgcggctgg cgttccggcg cattgatcga
     5401 aaaacgcgaa atcccgatgt attacttcaa aatcacggat tacgccgaag agctgctcaa
     5461 cgacttggac aagctggaac actggccgga acaagtcaaa accatgcagc gcaactggat
     5521 cggtaaatct cgcggcatga ccgtgcgctt cgccgtttca gacgacagca aacaaggttt
     5581 ggaaggcgat tacgcgaaat tcctgcaagt ttacaccacc cgccccgaca cgctgatggg
     5641 cgcgacttat gtcgccgttg ccgccgagca tccgctggca accgccgcag ccgccgacaa
     5701 acctgaattg caagagttta tcgccgaatg caaagccggc tcggtcgccg aagccgatat
     5761 ggcgacgatg gagaaaaaag gcgtgccgac cggccgctac gtcgtcaacc cgctcaacgg
     5821 cgacaagctg gaagtgtgga ttgccaacta tgtattgtgg ggctacggcg acggcgcggt
     5881 gatggcggtt ccggcgcacg acgaacgcga ttttgagttc gccaccaaat acaatctgcc
     5941 gaaaaaacaa gtcattgccg tcggcgacaa cgcatttgac gaaaaccaat ggcaagaatg
     6001 gtacggcgac aaagaaaacg gcgtattggt caacagcggc gacttggacg gcttggattt
     6061 tcagacggca ttcgacgccg tcgccgccaa gctgcaaagc caaggcgcgg gcgaaccgaa
     6121 aacccaatac cgcctgcgcg actggggcat ttcgcgccaa cgctactggg gctgcccgat
     6181 tcccatcgtc cattgcgaac aatgcggcga cgtacccgtc cctgccgacc aattgccggt
     6241 cgttttgcct gaaaacgtcg tacccgacgg catgggttcg ccgctggcaa aaatgcccga
     6301 gttttacgaa actgcctgcc catgctgcgg cggcgcggcg aaacgcgaaa ccgacaccat
     6361 ggacaccttc atggaatcga gctggtattt cttccgctac atgtcgccaa aattttcaga
     6421 cggcatggtc gatcctgccg ccgcgaaata ctggggcgcg gtcgaccaat acatcggcgg
     6481 catcgaacac gcgattttgc acctcttgta cgcgcgtttc ttcaccaaac tgatgcgcga
     6541 cgaaggtcta gtcaatgttg acgaaccgtt tgaacgcctg ctgacgcaag gcatggtcgt
     6601 ttgcgaaacc tactaccgcg aaaacgacaa aggcggcaaa gattggatca accccgccga
     6661 tgtcgagctg acgttcgacg acaaaggccg ccccatttcc gccgtcctca aagccgacgg
     6721 gctgcccgtc gtcatcagcg gcacggaaaa aatgtccaag tccaaaaaca acggcgtcga
     6781 tccgcaagaa ctgattaacg cctacggcgc ggacaccgcc cgcctgttta tgatgttcgc
     6841 cgcaccgccc gaacagtccc tcgaatggag cgacagcggc gtcgaaggcg cacaccgctt
     6901 cctgcgccgc ctgtggcgta ccgtttacga atacttgaag caaggcgaag cggtcaaagc
     6961 gttcgcaggc agccaagacg gtttgtctaa agaactcaaa gacctgcgcc acaaactgca
     7021 cgcgaccact gccaaagtca gcgacgacta cggccgccgc cagcagttca acaccgccat
     7081 cgccgccgtg atggaattgc tcaaccaata cgacaaaacc gacaccggcg gcgaacaagg
     7141 acgcgccgtc gcccaagaag tattggaaac cgccgtacgc ctgttgtggc ccatcgtgcc
     7201 gcacatctgc gaaaccctgt ggagcgaatt gaacggcgcg aaactgtggg aagcaggctg
     7261 gccgacagtc gacgaagccg ccttggtcaa atccgaaatc gaagtgatgg ttcaagtcaa
     7321 cggcaaactg cgcggcaaaa tcaccgtcgc cgccgacgcc tccaaagccg acctcgaagc
     7381 cgccgccctt gccactgaag gcgcggtgaa attcatggaa ggcaagcccg cgaagaaaat
     7441 catcgtcgta ccgggcagac tggtgaacat cgtcgtctaa accgctctta aggtttagcc
     7501 acacggataa aggccgtctg aaacttggaa acagggtttc agacggcctt tttaaggcag
     7561 attgggttgt ctgcattaca gacctcaaat atagtggatt aactttaaac cggtacgacg
     7621 ttgccccgcc ttgccctgct gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc
     7681 actaaaactg aaatctcaaa atccaaaaca tgaatttatt tttcgatacc aaattgggaa
     7741 agcaacaaaa taaagcaacc cataaaatcc gtgtaatgag tgaggcttgg ctggaaaaaa
     7801 acggctactg cccctgttgc ggaagcaagc cgatgcagag atttgccaat aacaaacctg
     7861 ttgcagacct cttttgctca aattgccacg agcaatatga attaaagagt aaaaatcaaa
     7921 aaaccatagg taacagtgtg cctgacggtg catatcgcac tatgttggag cgcatccggt
     7981 cagataccaa ccccaacttt ttctttcttg catataaaaa agcggattac tctatacggc
     8041 aattggtgct tgtacccaaa catttcatca cgccggacat gattattccc agaaataaag
     8101 gcattaaaaa ccggccgcac cacattatgt gttccatcaa tctcgcccct ttgcccgaaa
     8161 gcggcaaaat attcttaata gacgattccc gcattatcga acccgaaacc gttctgaaaa
     8221 aatggcaatc caatctgttt ttacgcaacc aaaatgcgga gcgcaaaggc tggcttttgg
     8281 ctgttatgaa atgtatcgac caacttcccg aagaattcac attgtcgcaa atatatgaat
     8341 ttgaaaacaa actatccatc caatttcccc aaaacaacca tatcagagac aaaatccgcc
     8401 aacagttgca aattttgcgc gaccaaaata cgatcgaatt cattggtcgc ggactttaca
     8461 aaaaaatcga caaattgccc ccgacttcca aggcgtttta atttcaaatc atgatactga
     8521 attcacaagg gatatttatt cttctgttat tctgaaaaca gttgaagtac agcacaatat
     8581 tgccgcaaaa ggcagcagcc gtaagaaggt cggggaatta ttggcaattt atgcgtgatt
     8641 tcgacaaatt ggctgaagaa gctgccgaac acgccgctga aggcgcggtg aaattcatag
     8701 acggcaagcc tgccaagaaa atcatcgccg taccgggcag actggcgaac atcgtggtgt
     8761 aaatcttttt aaaaacatca aacaatgtta agatgccgtc cgaaatccgt tttagattca
     8821 gacggcattt tttaaattta attttttaag gggtaagcct aatatgaaat ttccttcctt
     8881 ccttccttcc ttccttcctt taaacggata ctctgcctgt cggcagtaat ctcggtattg
     8941 ggggcttgta cggtcgttgc tgatgtttac ggtcaggatt ccgccacaat gaacgctgcg
     9001 gctgccaaag attatatgaa aacggttgag ttgaacaagt ctgccggcaa tgtcgatacc
     9061 acatccagaa cagcccgcag ggtgcaggca gtatttcgac gtatgctgcc ttatgccgat
     9121 gcggcaaata ataccggcca taggtttgac tggaaaatga cggttttcaa aaacgatgag
     9181 ctgaacgcgt gggcgatgcc cggtggaaaa atggcgtttt atacggggat agtcgacaaa
     9241 ctcaagctga ccgatgacga aattgccgcc attatggggc atgaaatgac gcacgccctg
     9301 catgaacacg gtaaaaataa ggtcgggcag caaatcttga ccaatacggc ggcgcagata
     9361 ggcacgcaga ttatattaga caaaaaaccg gatactaatc cggaattggt cggattgggt
     9421 atggatattt tggggacgta cggtcttacc ttgccttata gccgcagctt ggaagaagaa
     9481 gccgatgagg ggggaatgat gttgatggcg caggcaggct atcatccggc ggccgctgtc
     9541 agggtttggg aaaaaatgaa tcaggaaaac gaccaaaacg gctttattta tgctattacc
     9601 tctactcatc cgacaaacaa tgcccgtata gaaaatctaa aacggttgtt gccgaccgtt
     9661 atgccggttt atgagcaaag tgtcagaaat aaggggcgcg ttaataaaaa acgtcggcgt
     9721 taagggaagg ggatcgagaa tttgagccat tgtttcaaaa tgccgtctga aatcgtttga
     9781 gattcagact gcatttaaac agttctgtgc cccacccgtt ttgccttcaa gcccgcgccg
     9841 cttaaatcca atccccccct gcaacgggcg caaaaaatcc ccgtacctcg cggtcggtga
     9901 tgtttcgggt ttcgcgcccg tctgcgccgt gccttgctgt cgggctatgt cgtctgcacc
     9961 gccgccgttt cggcttggtt tgatgcggtc gggcatttat gcggctacgc cctgatattc
    10021 agttcggcgg tcttgcctgt cttggcaggc atattcagca gcgcgtctat tgtgaacttg
    10081 ctgattttgc cgtttgccaa gtcggctacg caatggcttc gatgcccttg tttttgacga
    10141 tggtcagcag cttcaacgcc gcgccgctcg gctttttaac gccccgctcc caagccgaaa
    10201 cgtgattttt tcccacgttg agatagatgg cgaaagcggc ttgcgatagt gcctccttct
    10261 ccctgattgc cttgatgtcc ccgccgctca acggtttgat ttcggtcagg caggacttgt
    10321 caaagccgcg catagtcttt ttgtcgattg cgccgatgtt gtaagcccct tccatcattt
    10381 catgaatggc ggctaatgcc tcgcttttgt atttcatgat tctatctccg tgataatgcc
    10441 gtcttctttc aaagccgcca gctctgcccg cgtgtatttc agataatatg cggcggcttt
    10501 tcggtaaacg tccagttctt tatccgaaat gttttccctg tcgttcttgg caaaggcgta
    10561 aacgaaaaat gccctatctg cctgtttgaa caatatcagg ctgcgatagc cgccgcttct
    10621 gccttgtcct tgccttgcta tgcgctgctt aatcacaccg ccgcctaaat ctgcgtctat
    10681 cagcccgtta tccgcccgct ctaccgcttc cagcagctcg gaatcgttga ttttgtgctt
    10741 cttggcaaat ttcactatcc attggttttt gaatatccgc attgtgtagc cgttgattag
    10801 tgatacttgg aattatacca gagacaggca aggcggcaag tcgccttttt ataccctgca
    10861 atttctccgt ttatgccgcc tgaaacaccg gcggctaacc tgattatttt ttaatcaatc
    10921 gcttttaatg gctcaaattg cgtttttagc gcgtttcgct gtcttcctat gccagtatat
    10981 aaccaagcgg tttaaccgcc attcctgctc aaaataggcg cggttccgtg cgttttggct
    11041 tttcattccg ctacgctccc actgccaaga cggtgaaaaa ccggaaaacc ccaaaagttg
    11101 ttaccgattc gttaccattt gttaccgcat ttgttaccaa ttttttatct ttttcttatt
    11161 ttatagtgga ttaaatttaa accggtacgg caaggcgagg caacgccgta ccggtttaaa
    11221 tttaatccac tatagtatag gttttttcca aaaacccaaa aaaaaccgct ctgcatcttg
    11281 gacggtttcc ccctcattcc ctacggtgcg tcagtattcc ccgcaagcta tttcccgctt
    11341 ggcattcctg atttggtggt cgttcagctt tatttttgcg gtattttttc gaggtatttt
    11401 tcagataccg caaaagatac cgtaaatttt aggttacttc aattaggctg aattaaacgg
    11461 aattatacaa tcaggaagaa gacaatagga tagcaaccag tctgaaagcc ttgtattgat
    11521 tgggattggt tgacggcatt agacaggatt aaacgaaaaa aacgcttaga atttctaagc
    11581 gttttgtgtg ttggtgccga cagcgagatt tgaactcgca cagcctacgg ccactacccc
    11641 ctcaagatag cgtgtctacc aatttcacca tgtcggcatt tgaaaaactg ttatttctgc
    11701 tgctgaggaa caggggcaga aggttcggta ttgcttacgg gtttgggtgc ttgctgagtt
    11761 tgttgtacgt tgctgaagtc caaaccgtgt tttgttgtgt gggtgtgaat atacaccata
    11821 gccatgcagg ttgcaaagaa aaatgttgct gcaacggcgg tcgagcggct gaggaagtta
    11881 gcgttgccgg cagagccgaa tacgccttgc gcgctgccgc ttcccgatcc gaaagtcgcg
    11941 ccggcatccg cgcctttgcc gtgttggagc aatactaaca cgatgacggc caaagcggaa
    12001 attatattaa caatccaaat tagggttttg aaggcttcca tatttttcta cgcattttgt
    12061 gcggcactga tgatggcggt aaaggagtcg tacgacaatg acgcgccgcc gacgagtgcg
    12121 ccgtccacat aaggtactgc gaagatgtcg gccgcgttgt ccgctttcac acttccgccg
    12181 taaaggacac ggattttaac atcgcttccg cacaaagaca agatttcttt gtagatgaat
    12241 gcgtgcatat cggcaatctg ttcgacggtg gcgactttgc cggtgccgat tgcccagacg
    12301 ggttcgtagg cgacggcgat gtttttggtg tccagtcctt ggaggatgga aagctgatgg
    12361 gcgatgactt cgtgttcttt gccggcttcg cgctcttcga ggctttcgcc gacgcacaat
    12421 aacgggatga gtccgacgtt gaggacgttt tccattttgc ggcgttggat ttcgtttttt
    12481 tcgccgaaat aaaggctgcg ttcggagtgt ccgatgagga cgatgtctgt gccggtgtcg
    12541 gcgagcattt cggcggacac ttcgccggtg tacgcgccgt tgtcggggaa gcggctcacg
    12601 tcttgggcgc aggtgaggat gcggttgttt aagacgattt gcatggcgtt gtgcagttgc
    12661 agcaggtaaa cggtcggggc ggcgagtccg atgaggacgc gttcggcggt ggggaggatg
    12721 cggaagcggt gcatcagtgc gttgttgttt tggagccggc cgttcatttt ccagttgccg
    12781 atgacccatt tttgatccca cattccgatt tggcgataca tcttttttgc tccgtgtcgt
    12841 gttttttctg tctgccgcgt gtggcgcgtt gcaatgtgaa gtttagtgga tatgcggcgg
    12901 gttcgcaact tggggcgggc ggctgcgggg gcgg
//
LOCUS       DBBZXW010000050        12843 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.050, whole genome shotgun sequence.
ACCESSION   DBBZXW010000050 DBBZXW010000000
VERSION     DBBZXW010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.050"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            390..1106
                     /locus_tag="ACJJD2_001267"
     CDS             390..1106
                     /locus_tag="ACJJD2_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HGG7579805.1"
                     /translation="MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGI
                     AAKALPEVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLPDD
                     DYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSME
                     EKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYGDE
                     NAPLDSLTVIGRVFWWSVLD"
     gene            1209..1634
                     /locus_tag="ACJJD2_001268"
     CDS             1209..1634
                     /locus_tag="ACJJD2_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579806.1"
                     /translation="MNFLGVQGELKVHELHHRTATLCFEWLGEVSAPRRKENYKDLKP
                     NVLYDFDGSGKHFANPDARYLLPVGSSGLILKHIQIDDEDTLLRLWCARNIPMPHRLS
                     KIPMLRQYYLSKAWHEIYAINQHLRKTKLIVDVAYDPTD"
     gene            1878..2078
                     /locus_tag="ACJJD2_001269"
     CDS             1878..2078
                     /locus_tag="ACJJD2_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579807.1"
                     /translation="METITIPKENFDALLNLARTAVALNENFIPKINYGASTIPAAGF
                     AALNEFGIARSTVESLEILKIK"
     gene            2146..2505
                     /locus_tag="ACJJD2_001270"
     CDS             2146..2505
                     /locus_tag="ACJJD2_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579808.1"
                     /translation="METQEKKFVPASKQIPTVNSGWLDRELGEAMSEAVRACLAHGKQ
                     SEITVKLKIQPQNIQSGTVKISHDVATKLPKEKREGGIVFATPDGNIQADDPAQGKLK
                     LKQVSNTSSTLKMVRSN"
     gene            2530..3384
                     /locus_tag="ACJJD2_001271"
     CDS             2530..3384
                     /locus_tag="ACJJD2_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HGG7579809.1"
                     /translation="METQENMIKTALQAAQKPFFEFAPNNTPLVFTPDQDGGWRYKSH
                     PELMQNPYRKCGKFLMHDTASLIKFVQKHKQDGTQIYIDADFKSGRIDVTAVINGHTQ
                     QAPGWLDFYAVYTPQHTTSASNWLNNNAHRMNQMEFSHFLTNNARNIVSKNPGNENSV
                     YPTAAEVLDFALNLEYTEKTTFKQGYREQDGRINFTFQSEDSGQTEKNLKMFERFGIE
                     FTPHQGGASYFVEALLKFRIDKNSGALVLWYELQQIDAVIEQAAKDISEAVQKAFPEI
                     DIYFGVIA"
     gene            3454..3669
                     /locus_tag="ACJJD2_001272"
     CDS             3454..3669
                     /locus_tag="ACJJD2_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579810.1"
                     /translation="MTITEEYSIDIRVTSEQGKNDYGYPTERYGCDIINTDGELLVGI
                     EPEYKTPFAAVRKALICLTKDNLKNAA"
     gene            3704..3964
                     /locus_tag="ACJJD2_001273"
     CDS             3704..3964
                     /locus_tag="ACJJD2_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO1622 family putative holin"
                     /protein_id="HGG7579811.1"
                     /translation="MKYLIRTALLAVAAAGIYACQPQSEAAVQVKAENSLTAMRLAVA
                     DKQAEIDGLNAQIDAEIRQREAEELKDYRWIHGDAEVPELEK"
     gene            3961..4254
                     /locus_tag="ACJJD2_001274"
     CDS             3961..4254
                     /locus_tag="ACJJD2_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579812.1"
                     /translation="MNFQEENENIKNDIEINLLHSAEADSVEAMMDLAVYGLAAMVAK
                     HNKTRGEQLVLQAIAGHMRKLLAALPETESLVQTGKVYRRLEDLIFKTYLPEQ"
     gene            4257..4448
                     /locus_tag="ACJJD2_001275"
     CDS             4257..4448
                     /locus_tag="ACJJD2_001275"
                     /inference="COORDINATES: protein motif:HMM:NF037202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type ISP restriction/modification enzyme"
                     /protein_id="HGG7579813.1"
                     /translation="MNTNQDTIPFGGNLVICCSTGNGGDGRFSCLITDQIPDLNLVRS
                     GQAFPMFIYEYETREKRKA"
     gene            4448..4588
                     /locus_tag="ACJJD2_001276"
     CDS             4448..4588
                     /locus_tag="ACJJD2_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HGG7579814.1"
                     /translation="MDTLLKIIIALSFSGAEALVVWLFITAADAVLRRFQKPSHYRRV
                     KK"
     gene            4585..4794
                     /locus_tag="ACJJD2_001277"
     CDS             4585..4794
                     /locus_tag="ACJJD2_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HGG7579815.1"
                     /translation="MNINELGARIDRPTIRELIAYATCRNRPISNSTLLRMEKDGRIP
                     CRLKTPLTSPVWDTREVLEALGLQQ"
     gene            complement(4852..5769)
                     /locus_tag="ACJJD2_001278"
     CDS             complement(4852..5769)
                     /locus_tag="ACJJD2_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005634 - nucleus [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HGG7579816.1"
                     /translation="MNVSVLNFGNTPVSFRQDGFLNATAIASHFGKLPKDYLKSEQTQ
                     QYISALAENLSVRRKILTEANQIVIVKRGGSEQGTWLHPKLAIHFARWLNPKFAVWCD
                     EQIEILLNGKISDGIKTVTPKPTRALPDGLTGEQIEAVKKLHNALTKSAPKEAQARIA
                     ITLWSAVKSKFGCSYKEVPAEQFPEVLSVMGRVAVENGVLYGEVLDREPLPAPQPALP
                     ISGNALYDLAVAVRYGAWAIQMGRDVSLPLKQLGCKQAVTMWTVWAETRSRLKAAANA
                     LEALNAHADAEHAAKIRPMLPEIRNLSSV"
     gene            complement(6638..6994)
                     /locus_tag="ACJJD2_001279"
     CDS             complement(6638..6994)
                     /locus_tag="ACJJD2_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HGG7579817.1"
                     /translation="MAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAI
                     LTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQE
                     FEAVARKWKKKPLKTK"
     gene            complement(7542..7922)
                     /locus_tag="ACJJD2_001280"
     CDS             complement(7542..7922)
                     /locus_tag="ACJJD2_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7579818.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADYHHKMSGNPLPDKPHIQCWAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAIKTAVAKAFKLY"
     gene            complement(8079..9275)
                     /locus_tag="ACJJD2_001281"
     CDS             complement(8079..9275)
                     /locus_tag="ACJJD2_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HGG7579819.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGGRSWK
                     LSFVQDGRQQTISLGRYPDFSLADAREWREEVRRKRAHGENVVNKKVRADFAFEKVTR
                     DWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDT
                     LRKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERAKTGNMAALSPSELPRLIDFLE
                     QRNEFAVYAGRVRIHPVTRLCIYWLLLTMTRIQEAALMEWSELDGEVWRIPAERKKER
                     RGHDVPLSRAMQWVLDQARALNVNGRFVFESVNFQGHINKESPRVAMQRAGLDTTAHG
                     LRSLARTYLREVLKVDNDVAEKLLAHSLGTRTQTAYNRSELWEERKDALERWGNDVLR
                     LAKNGK"
     gene            complement(9466..9555)
                     /locus_tag="ACJJD2_001282"
     tRNA            complement(9466..9555)
                     /locus_tag="ACJJD2_001282"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9519..9521),aa:Ser,seq:cga)
     gene            complement(9659..9749)
                     /locus_tag="ACJJD2_001283"
     tRNA            complement(9659..9749)
                     /locus_tag="ACJJD2_001283"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9713..9715),aa:Ser,seq:tga)
     gene            complement(9832..10611)
                     /gene="yaaA"
                     /locus_tag="ACJJD2_001284"
     CDS             complement(9832..10611)
                     /gene="yaaA"
                     /locus_tag="ACJJD2_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HGG7579820.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AVEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            complement(10775..11962)
                     /gene="dapC"
                     /locus_tag="ACJJD2_001285"
     CDS             complement(10775..11962)
                     /gene="dapC"
                     /locus_tag="ACJJD2_001285"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HGG7579821.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLDPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            complement(12039..12491)
                     /gene="dut"
                     /locus_tag="ACJJD2_001286"
     CDS             complement(12039..12491)
                     /gene="dut"
                     /locus_tag="ACJJD2_001286"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HGG7579822.1"
                     /translation="MNIEVEMKVLDERMADFIPTYATAGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFAVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
BASE COUNT         3514 a         3300 c         2940 g         3089 t
ORIGIN      
        1 aatattaaaa attatcgtca tcaatgcggc ttccccagcc cgcggcgagc tttccacgac
       61 aggctttttt tatttgggtt ggtcgtctgg tttctttgag ttcaaaaaca ggtcgggata
      121 cttaagtttt attcgtgcag gtatcccgcg cttcgtccaa ttgaaaacgc attgagggct
      181 attccctgtt attcgaccaa cttccgcgta actgccgatt gattgcaaca ggcgtttgtc
      241 ttcattgact cttttatcca taaataaacc aaatgtttaa atctaatgct aatattaaac
      301 actatgttta gataaaaatc aagtcttgtg taacaacatt ttgtttaaat atgggagaat
      361 aattaagcca accgcgaata agattaaaaa tgacaatgca cgagacaact gacagacttt
      421 ttgagatagc caaagagcag ggagttttaa agccggctga catagcagag cgtctgaata
      481 tcagccaaca ggctttgaaa aactgggaaa gtcgtggcat agcggcaaag gcgctgcctg
      541 aagtagcaaa agcattcggt gtatctgaaa catggctgag aacaggtgaa ggcagccgaa
      601 ccgcgcccgt ccttattgac cccgacctac cccacgaagt caaagacatc caccgcccga
      661 tgacgtggag cagcaacgac ccgctgcccg acgatgatta tgttttcgtc ccctacctca
      721 aagagagctg cttcaaaggc ggagtaggca cgtatgaaat ccccgattac aacggctacc
      781 gcctgccgtt cggcaaatcc acgcttaaac gcaaaggcat caatcccgac aacgtgtttt
      841 gctgcaccct gaccggcgac agtatggagg aaaaaatcgc agaagacgcg gcaattgccg
      901 tagatacggg cgaaaccgcc atacgcgacg gcaaaatcta cgccttcgcc caggacggta
      961 tgttccgcgt gaagtacctg atacggcagc ctggcaacag cgttctgata cgcagccaca
     1021 acagcggttt ctatggcgac gaaaacgccc ccttggacag cctgaccgtt atcggcaggg
     1081 tattttggtg gagcgtgctg gattgaaaaa tgttgctatt acgacgagat aatattgata
     1141 gggctttcaa gattgtcaaa aataggcgtt ttgattcccc ttggtggcct ggtgagtacg
     1201 atgccggtat gaatttcctt ggcgtacaag gagagttgaa ggttcacgag ctgcatcaca
     1261 gaacagcaac cctgtgcttt gagtggcttg gcgaagtatc tgcgccgcgc agaaaagaga
     1321 actacaaaga cctcaagcca aatgtattgt atgactttga tggttccggt aagcattttg
     1381 ccaaccctga cgcaaggtat ctattgcccg tcggttcaag cggcttaatc ttaaaacata
     1441 tccaaatcga tgacgaagac actctgttgc ggctatggtg cgcacgaaat atcccaatgc
     1501 cacaccggct atctaaaatc ccgatgcttc ggcagtatta tctaagcaag gcatggcacg
     1561 aaatttatgc tatcaaccaa cacctaagga aaacgaagct gatagttgat gtggcatacg
     1621 accccacaga ttaaacaacc cgcccgcatt atgcgggctt ttttcatgcc ccgccgaacc
     1681 tgaaaacaac acaaaaccga caaagccgcc ttaataggcg gtttttttgc gcctgcgaaa
     1741 tctcaaaaat aaattctttt aataatcaaa atgtttataa accttaaaca aaaatcttaa
     1801 acagattgtt gcatattatt aaacgctatg tttaaataca cccatcgaaa caaacaacag
     1861 ccacatggag taccgacatg gaaaccatca ccatccctaa agaaaatttc gacgctttgc
     1921 taaatctcgc aagaaccgcc gtcgccctga acgaaaattt tattccaaaa ataaattacg
     1981 gagcatccac cataccagca gccggctttg ccgcacttaa cgagtttgga atagcccgct
     2041 ccaccgtgga atctttggaa attctcaaaa ttaaataacc tcctcggtat tgtcatcccg
     2101 tgataccggc aacctaacta acctctcttt aaaggaaaat caaaaatgga aacccaagaa
     2161 aagaaatttg ttcctgcctc caagcaaata ccgaccgtaa atagcggctg gttagaccgt
     2221 gaattaggcg aagccatgag tgaagcggtg cgtgcctgcc ttgctcacgg taaacagtca
     2281 gaaattactg tcaagctcaa aatccaaccc caaaacatcc aaagcggaac ggtaaaaatc
     2341 agccacgatg tagcaaccaa actgcccaaa gaaaaacgcg aaggcggcat cgtctttgct
     2401 acacctgacg gcaacatcca agccgacgat ccggcacaag gaaaattgaa actcaaacaa
     2461 gtttccaata cgtcaagcac gttgaaaatg gtcagatcca actaactcaa acacaaaagg
     2521 aaatctaaaa tggaaaccca agaaaacatg attaaaaccg ccttacaagc agctcaaaaa
     2581 cctttttttg agtttgcacc gaacaatact ccgcttgtat tcacaccaga ccaagacggt
     2641 ggctggagat acaaatcaca ccccgaattg atgcaaaacc cgtaccgcaa gtgcggcaaa
     2701 ttcctcatgc acgataccgc cagtcttatt aagtttgtac aaaaacacaa acaggacggc
     2761 acacaaatct acattgatgc cgatttcaaa tcagggcgta ttgatgtcac cgccgtcatc
     2821 aatggccata cgcaacaagc tccgggctgg ctcgattttt atgccgtata caccccgcaa
     2881 cacactacat cggcatccaa ctggctgaac aacaatgcgc accgcatgaa tcagatggag
     2941 ttttcccatt tcctgaccaa caatgcccgc aacatcgtat ccaaaaatcc cggtaacgaa
     3001 aattccgttt acccgaccgc cgccgaagta ttggatttcg cgctcaatct cgagtacacc
     3061 gaaaaaacca ccttcaaaca aggctatcgt gaacaggacg gcagaatcaa ctttaccttc
     3121 caatccgaag actcagggca aacagagaaa aacctcaaaa tgtttgaacg tttcggcatc
     3181 gagttcaccc cgcatcaagg cggtgcatcc tactttgttg aagccctgtt gaaattccgc
     3241 atcgacaaaa acagcggcgc actcgtcctg tggtacgaat tgcagcaaat cgatgctgta
     3301 atcgaacaag cggcaaaaga catttccgaa gccgtacaaa aagccttccc tgaaatcgac
     3361 atctatttcg gcgtaatcgc ctaaaaaaaa gtcgtctgaa atcgtgaacc ttcagacgac
     3421 ctccacaaaa acccaaatcc gaaagacccc aaaatgacca tcacagaaga atactccatc
     3481 gacatccgag taacctcaga acaggggaaa aacgactacg gctaccccac cgaacgctac
     3541 ggatgcgaca tcatcaacac agacggggag ctacttgtcg gcatagagcc agagtacaaa
     3601 accccctttg ccgccgtcag aaaggcgctc atctgtctga caaaagacaa cctcaaaaac
     3661 gctgcctgat attaagccgt taccccaata atgaggaatc aaaatgaaat acttgatccg
     3721 caccgcctta ctcgcagtcg cagccgccgg catctacgcc tgccaaccgc aatccgaagc
     3781 cgcagtgcaa gtcaaggctg aaaacagcct gaccgctatg cgcttagccg tcgccgacaa
     3841 acaggcagag attgacgggt tgaacgccca aatcgacgcc gaaatcagac aacgcgaagc
     3901 cgaagaattg aaagactacc gatggataca cggcgacgcg gaagtgccgg agctggaaaa
     3961 atgaactttc aggaagaaaa cgagaacatc aagaatgaca tagagattaa tctcttgcat
     4021 tccgctgaag ccgacagcgt ggaggcaatg atggacttgg cggtttacgg gctggcggcg
     4081 atggttgcca aacacaacaa aacgcgcggc gagcagcttg tgttacaggc gattgccggt
     4141 catatgcgga agcttttggc cgcgcttccc gaaaccgagt cattggtgca gaccgggaag
     4201 gtttaccgcc gacttgaaga tttgattttt aaaacgtatt tgccggagca gtaaagatga
     4261 acacgaatca agatacgatt ccatttggcg gcaaccttgt gatttgctgt tcgacgggaa
     4321 acggcgggga cgggcggttt tcttgtctga ttaccgatca gataccggat ttaaatcttg
     4381 tcagaagcgg gcaggcgttc ccgatgttca tttatgagta cgaaactaga gaaaaaagga
     4441 aagcctgatg gacaccctat taaaaatcat catcgcgctg tcattttccg gcgctgaggc
     4501 attggtggta tggcttttca tcacggccgc cgatgccgta ttacgccgct tccagaaacc
     4561 gagtcattac aggagagtaa aaaaatgaac atcaacgaac tgggcgcaag gatagaccgc
     4621 ccgaccatcc gcgaactgat tgcctacgca acctgccgca accgccccat ttcaaactcg
     4681 acactgctgc gtatggaaaa agacgggcgg ataccgtgcc gtctgaaaac cccactcaca
     4741 tcccccgtat gggacacccg cgaagttttg gaagccctgg ggttacagca ataaaaaaac
     4801 gcccgattag ggcgttttca cattcagacg gcttttgtat tccctactgc atcaaaccga
     4861 cgacaggttg cggatttcgg gcagcatcgg gcggattttt gccgcgtgtt ccgcgtcggc
     4921 gtgtgcgttt aaggcttcga gggcgtttgc ggcggctttg aggcggctgc gtgtttccgc
     4981 ccagaccgtc cacatcgtta ccgcctgttt gcagccgagc tgcttcagcg gcagggaaac
     5041 gtctctgccc atttggatgg cccacgcgcc gtatctgacg gcaacggcga ggtcgtacag
     5101 ggcgttgccg ctgatgggca gggcaggttg cggtgcgggc aatggttcgc ggtcgaggac
     5161 ttcgccgtac agcacgccgt tttcaactgc cacgcggccc atcacgctta aaacttcggg
     5221 gaactgttcg gcaggtactt ctttgtagct gcatccgaac ttgcttttga cggcagacca
     5281 aagggtaatg gcgatacgcg cctgcgcttc tttgggtgcg gatttggtca gggcgttgtg
     5341 cagttttttg acggcttcga tttgttcgcc ggtcaagccg tccggaaggg cgcgggtggg
     5401 tttgggggta actgttttta tgccgtctga aattttgccg ttaagtaaaa tttcaatctg
     5461 ctcatcgcac caaaccgcaa atttcggatt aagccaacgg gcaaagtgaa tagcgagttt
     5521 gggatgcagc catgtgcctt gctcactgcc accacgcttc acgataacta tttgatttgc
     5581 ttccgttagg atttttctcc taacgcttaa attctcagca agtgcagaga tatattgttg
     5641 agtttgttca ctttttaggt agtctttagg taacttgcca aagtgagatg caatggcggt
     5701 tgcatttaaa aaaccgtctt gacggaaaga tacaggggtg ttaccaaaat tgagaacaga
     5761 tacgttcatg atagtttcct agtttagttt cgaaagaccc aaatgggtgg tcgggaggtt
     5821 cgaaaaccta ctagaaaagg ccggcgttat tccccttgcg ggtattgtat tccgcaccct
     5881 cccgaccata ggaaactagt tcggatatat cgaaacaaac aaccaaacaa gaaaacttat
     5941 ggacgtaaaa aattcacgct gacggggtaa atgccgttct agtagaggtt ttcgacgcct
     6001 cgtgtttcgt aatatatcca atctttctat tttctgcaag cataaaaaag ccgccatgtg
     6061 gcggataggg tcgcggtctt caacagcatg taggatttag gaatgcccaa attgggcgca
     6121 ggggtgttga aaacacgcaa acaggcgcgc cgccagcctt acgggtaggc gcacccccac
     6181 ataggagtaa atcgatttga tacgtataga cgtaaaaaat tccactctat cgtgttggat
     6241 atacgctgtt tgtcaggtgt tttcaagcac cgtgggaaat attatataga gttatggaaa
     6301 tgtgtcaaga gaattagccc aaatgggcgg acgcgcggtt aagaacccac ataggagggc
     6361 ggacttattc ccctttcggg tcttgtattc gtcgcccacg cggtcataga aacttcctgc
     6421 tatcgaaaca aacaacaagg aaagaaaact atagacatga aaaaatcaca ttgacggagt
     6481 gattgccgct gtagtgtggt ttctgacgcc acgaacagga atataaaaca aaaccccctg
     6541 cacatgcaag gggtttccca aaaaaccgta ggcggcaaac tgaaaggccg tctgaatttc
     6601 agacggccta tgttgcggcg gatgttaagc tattaagcta tttggttttc agaggctttt
     6661 tcttccattt tcgggctacg gcttcaaatt cttgaaaggc cgtcggtgcg ctcctgatac
     6721 ggcgtatttc aaaaataaag ctgcttaggt tgtcccagtc acgtaacagc atggagtatt
     6781 cgaaatcttt atacattttc tcgtgcagtg ctccgcctaa tacgcccgca cagacaaatt
     6841 cgcgctggtt taaaactgtc agtatggctt cacggtcttt cttcttgtcc ggggtatccg
     6901 atgtataggt ggcgagtatg catccgtctg tttttgccag cccgtttact atggttatgg
     6961 cttcttgaag ggcggcattg ttacgttcgg ccatgatcag cgcgcttttt ggcgttttct
     7021 gtattcctca tgatgccgta agcggcaaca aaaacgccga taacagtcaa tatcggcgtt
     7081 gctatctgta ttaggttgtc agtcattgcc gtcccagccg tctgaaaggc ggaaatcacg
     7141 gctttccgaa taaatatgtc ccattgtcat ccccttaagc tgatgttgaa aataaatcct
     7201 tgcgtcggaa tatacggcat tgcttgacta ttttcaagat tctgtacctc gtgaaccgga
     7261 ctatacaaaa aaaccgcctt cgtgtaaagc ggttcttaaa tcgcccgtta aggcggacac
     7321 aacgatagcc aaactggaac aggaggcggc aaaggcgggt ttgtccaaaa cagccttgat
     7381 tgaaaggctg attggggatt tgtaggcgtt tgcagatacg acaaggggcg cattccgcgc
     7441 cccatcacac gcacggacgg cttgtcatcg cctgtcgccc gtgcgcggct gcccatattt
     7501 cagaacagtc ttgcaagccc ctttaaggga acggttttat tctagtacag tttgaatgcc
     7561 ttggcaacgg ctgttttaat cgcctgaaaa tcctcttcac tgattattgg aatgcagcgg
     7621 tcgcgccctt tgggtttgta tcggtctaat cgtgccaatc cgactgttgc cgtcatgtcg
     7681 cattttgccc aacattggat gtgcggcttg tccggtaagg ggtttccact cattttgtgg
     7741 tggtagtccg ccaaagggac aggttctgtg ctgcttaagg gtacgaccgt taccagtttg
     7801 ccgttgtgcc tgtttcgcgc tatgacgacg acagggcgtt tcttgaccat ttccggttct
     7861 tcataaccgc gaaagtcgca catgataacc gaacgttccc ttggttggaa ttttaaaggc
     7921 attagccgct cctgacgatg acaggctgct attatagcag ttcttacaca aaaaaccgcc
     7981 ttcgtgtaaa gcggttgcaa aaaagccttc caataaaaat gcggaaacgg ttttttattt
     8041 gcgtttccgc ataatacaaa cacacacaca aaaaaaaatc attttccgtt tttggcaagc
     8101 ctcaaaacat cattccccca ccgttccagc gcatccttac gctcctccca aagctccgag
     8161 cggttgtaag ccgtttgcgt cctcgtcccc aacgaatggg caagcagctt ttccgccaca
     8221 tcattatcca ccttcagaac ctcgcgcaaa taagtacgcg caagcgagcg caaaccgtgc
     8281 gccgtcgtat ccagccccgc ccgctgcatc gccacgcgcg gactttcctt attgatatgc
     8341 ccttgaaaat tcacactttc aaacacaaac cgcccgttca cattcaacgc ccgcgcctga
     8401 tccaacaccc actgcatcgc ccgcgacagc ggcacatcat gcccccgccg ctcctttttc
     8461 cgttcggcgg ggatacgcca aacctccccg tccaactccg accactccat caacgccgcc
     8521 tcctgaatcc gcgtcattgt caacagcagc caatagatac aaagccgcgt tacaggatgg
     8581 atacgcaccc tgcccgcata aaccgcaaat tcattgcgct gctccaaaaa atcaatcagg
     8641 cgcggcaatt cagacggact caacgctgcc atattccccg ttttcgcccg ttcaaacaca
     8701 cccgaaccga tttgcgcgac agggttgatt tccatcattc ccgaaccgac cgcaaacgca
     8761 aacaccatct tcagactgtt tttcgttttg cgcaacgtat caacgatacc gcgcgcctcc
     8821 atcacacgga ggcagccgac cacatccgcc gtcctgacct ggcgaatatc aagattgccg
     8881 atagccggaa aaacccaccg ttcaaaattc cgcataacct gtccggcata cttttcagac
     8941 cgccccttcg accaacgcac aaaccaatca cgcgtcacct tctcaaaagc aaaatccgcc
     9001 cgcaccttct tattgacgac attttccccg tgcgcccgtt ttcggcgcac ctcctcccgc
     9061 cattcccgcg catcggccag cgaaaaatca ggataccgcc ccagcgaaat tgtctgctgc
     9121 cttccatcct gcacaaacga cagcttccaa ctccgcccgc ccgtcgggta gacccacaaa
     9181 gccagcccgc ccccgtctga caacttatac agcttatcgc gcggcttcgc atttttaacc
     9241 tgatttgccg acagcggcgt aatgattttc gccattatgg taatttccca cttatccaaa
     9301 aattaccata tacattacca taaaaaaatg caataagaag ataccgcaag attgcaaatg
     9361 atttactttg acgcgttttg atagggcaaa ccgatgattt ttatatggta attgacacaa
     9421 cttgaacaaa aaagaaccgc cctgaatcag ggcggttttg ttttctggcg gaaacggtgg
     9481 gattcgaacc cacggaggat ttgcaccctc agcggatttc gagtccgctg cattcagcct
     9541 ctctgccacg tttccgaaag atgtttcaac ctaaaaggaa acacgatgaa gtaaaaccaa
     9601 ataaaaatgc cgatgcttta tgctacttca tttttatttg gtttttgacc tcaaggattg
     9661 gcggaagcgg tgagattcga actcacggag ggctatcaac cctcgacggt tttcaagacc
     9721 gttgcattaa accgctctgc cacgcttccg tcttcttgaa gagtaggaat aataatgaag
     9781 tttatacatt ttgccaagca cttttttcgg aaaatactta atttattgtt ttcattttat
     9841 ttgttccgaa cgcataaaaa cccattcgct ttcatttgaa gccgcgtcat tgaatgcgta
     9901 gccttcgtaa ttaaaatttt tcagcatttc agggtcggta atatgatgtt ctaccgcata
     9961 gcgcaccatt aatccgcgcg cgcgcttggc atagaaactg atgattttat atttaccgtt
    10021 tttttcgtct ttaaatatcg gggtaatcag ccgcgcccga agttttttcg tgttgacaga
    10081 cttgaaatat tcctgtgagg caaggttgac aagcgtattg ctgcctgctt gggcaagcgt
    10141 gtcatttaaa aggttggtaa tgatgtcgcc ccaaaactca tacaaattct tgccgcgcaa
    10201 attggcaaat gccgtcccca tttccaaacg atagggctgt atcaggtcta acgggcgaag
    10261 aagaccgtac agaccggaca gcaggcggac atggttttgc agatagcgta tctgtccaat
    10321 atccaatgtg tttgcatcca taccttcgta aacatcgccg ttgaacataa agaccgcctg
    10381 tttggcgttt tccggcgtaa acggcgtgtg ccattctgca ttgcgctgcg cgtttaagag
    10441 ggcaattttg tcggaaacgt gcatcagttc ggcaatctgt tgcggcgcaa gctcgcgcaa
    10501 ctgctgcatt agaatgtcgg actctgccag caggtcgggt tgggtaaact cgctgacagg
    10561 ggcagggtct ttttcgttaa ggtttttcgc aggggaaagg acaaaaaaca taatctgctc
    10621 ggtatagtgt caaacacggg gattttaagt ttaaacgtgt ttgcgggcaa gccgattaga
    10681 ttaaaagtga agtaaatacc gttacagcaa attcaaccgt aagatattga aaaatgccgt
    10741 ctgaacaaaa gttcagacgg cattttttta ttctttaccg atatagggaa acaatggttt
    10801 ccgcagcttt gacacaagtt gcgacatcgg caaccaaagc gatacgcaca taaccttccc
    10861 cgggattgcc ctgttcggta tcccgtgcca aaaagcgtcc gggcaatact tggatagcgg
    10921 ctttttgcca taaattgcgt gcaaatgcca aatcgtcgcc atcggggact ttcaaccaaa
    10981 tgtaaaacga ggcatctggt aatttaacat caaatacctg ttgcaaaatg ggaataacgc
    11041 gctcaaattt ttcctgatac aggcggcggt tgtcgataac gtgctgttcg tcatcccaag
    11101 cggcaatgct tgcgcgctgc acgggaatgc tcattgcact gccgtgatag gttctgtaaa
    11161 gcagaaagtt tttaagcagt tcggcatcgc cggcgacaaa accggaacgc aggcccggaa
    11221 cgttggaacg cttggacaaa ctggtgaaca taagcagttt ttgcctgctt cgacccaact
    11281 gtgcagcggc ctgcaggcag cctaaaggtt tgttgccgtc gaaatagatt tcggaatagc
    11341 attcatccga ggcaataatg aaaccatatt tatcctgtaa atcaaaaact tctttccatc
    11401 catccaaatc cagcacgctg ccgctggggt tgttgggcga gcagacgaac accagtttgg
    11461 tgcgtttcca aacctcttcg gaaatactac gccaatcggg gttgaaagac ggcgcggggc
    11521 aattggcaaa atggatttca ccgccgccca aaagtgtcgc accttcgtaa atctgataaa
    11581 agggattcgg gctgacaatt gcgggtttga tgccgtctga aacagggtcc aacacggttt
    11641 gaacaaaaga aaacaacgcc tccctactgc ctaaaaccgg cagaatttca ttatccgcat
    11701 ccactgtcaa gccatcataa cggcgtttta accagttcgc acacgcctga cgcagttcag
    11761 gcaaaccggc cgtcagcgga tatttttcca actcgtgcaa tgaggcggtc agcgcatctg
    11821 taatgacttt cggtgttgga tgtttcggtt cgccgatatg cagtgggacg gcttccagac
    11881 cttcgggggc ggaaatgccc tgcatcgctt cacgcagtcg ggcaaaggga tagggtttga
    11941 gttggttgag taaggtattc ataatgttct ccggttgtcg gtatatcgga agatatgccg
    12001 tctgaacctg acggcaccca tcagacggca ttttatattc aatgcaaacc cgtactgccg
    12061 aaaccgcctt ctccacggct gcttccgaca aattcttcga cacgtttgaa acgcgcctgc
    12121 acgattggaa cgataaccat ctgcgcgata cgctcaaacg gcttgacggc aaacggttcg
    12181 ctgcttctgt tccataacga caccttcaat tccccttgat aatcggagtc aatcaaaccg
    12241 accaaattgc ccaaaacaat gccgtgttta tgccccaagc cggaacgggg cagcaaaacg
    12301 gcggcatatg aaggattggc caaataaatt gccaaacctg tcggcacaag aaacgtttcc
    12361 cccggctgca agacgacttc ctcatccaaa caggcgcgca agtccaaacc ggcagaaccc
    12421 gctgtcgcat aggtagggat aaaatccgcc atcctctcgt ccaatacttt catttctact
    12481 tcaatattca tcgtcttgct cctgcatacg gccggtttca aagatgggag attatacaca
    12541 agccatgttt acgctgaaac acagcaaatc ggttttgttt tgaaatccgt tgccaatgta
    12601 taatacccgc ccttccggtt atgaagacga acattatgca cacactaagg caacttatca
    12661 gaaatgactg aaactcaaaa aactggattc ccactttcgt gggaatgacg tggtgcaggt
    12721 ttccgtacga atggattcgt cattcccgcg caggcgggaa tctagacctg tcggtttcgg
    12781 tttttttggc tagtgccgca acattaaatt tctagattcc cactttcgtg ggaatgacgg
    12841 gat
//
LOCUS       DBBZXW010000051        12486 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.051, whole genome shotgun sequence.
ACCESSION   DBBZXW010000051 DBBZXW010000000
VERSION     DBBZXW010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.051"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            171..1094
                     /locus_tag="ACJJD2_001287"
     CDS             171..1094
                     /locus_tag="ACJJD2_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7579823.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(1159..2547)
                     /gene="fumC"
                     /locus_tag="ACJJD2_001288"
     CDS             complement(1159..2547)
                     /gene="fumC"
                     /locus_tag="ACJJD2_001288"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HGG7579824.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNDKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(2688..4667)
                     /gene="tkt"
                     /locus_tag="ACJJD2_001289"
     CDS             complement(2688..4667)
                     /gene="tkt"
                     /locus_tag="ACJJD2_001289"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HGG7579825.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DGYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQATVLPEGLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKEFGFTVDNVVDTVKSVL"
     gene            5194..6690
                     /gene="ccoG"
                     /locus_tag="ACJJD2_001290"
     CDS             5194..6690
                     /gene="ccoG"
                     /locus_tag="ACJJD2_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HGG7579826.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            6693..7241
                     /locus_tag="ACJJD2_001291"
     CDS             6693..7241
                     /locus_tag="ACJJD2_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HGG7579827.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(7583..8758)
                     /locus_tag="ACJJD2_001292"
     CDS             complement(7583..8758)
                     /locus_tag="ACJJD2_001292"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HGG7579828.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKYVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(9317..9391)
                     /locus_tag="ACJJD2_001293"
     tRNA            complement(9317..9391)
                     /locus_tag="ACJJD2_001293"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9356..9358),aa:Glu,seq:ttc)
     gene            complement(9409..9485)
                     /locus_tag="ACJJD2_001294"
     tRNA            complement(9409..9485)
                     /locus_tag="ACJJD2_001294"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9449..9451),aa:Arg,seq:acg)
     gene            9603..10988
                     /locus_tag="ACJJD2_001295"
     CDS             9603..10988
                     /locus_tag="ACJJD2_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HGG7579829.1"
                     /translation="MIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEVALV
                     KFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELFSVLKGCVLV
                     AHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSIIERLGIVVED
                     RHRAMADVSALCDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLREQLYGLPDS
                     MGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFPALGRLHAYK
                     IKAELVRRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTTALKNGVTDNPPTGLFA
                     NKKAARRALSSWAETYGLCPAAAGILSDGYTEDEPCPVYVSGRCDKACGRSDEQVLAF
                     AHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKDLPDAFKAKF
                     KTDRKNIKEIG"
     gene            complement(11199..11978)
                     /locus_tag="ACJJD2_001296"
     CDS             complement(11199..11978)
                     /locus_tag="ACJJD2_001296"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HGG7579830.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALAEHPLVGEYGHSFRFVPVTTRAANPSGLGGKRIPELLKNNSIEQALHTKFTPES
                     TRFMICGNPEIVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(12196..>12486)
                     /locus_tag="ACJJD2_001297"
     CDS             complement(12196..>12486)
                     /locus_tag="ACJJD2_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7579831.1"
                     /translation="DSAENRQHLEEHQLLDGIMRKACRNRPLSEVQTKRNRYLSKTRY
                     VVEQSFGTLHRKFRYARAAYFGLLKVSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT         2782 a         2900 c         3591 g         3213 t
ORIGIN      
        1 ttaaaattca ggcggtgttt tcaaatagcg cgaagcaata gccgagcttc agccggtttg
       61 tttgaaatca aagggttgga atcaaacgcc aaacgcttga accatcattg cccgatgcgg
      121 caaaccggca tcgtccggca atacggttgt ttaaaaatag gaaaatcagg atggaaaacc
      181 aaaggccgct cctaggcttc gcgttggcac ttttggcggc gatgacgtgg ggaacgctgc
      241 cgattgccgt gcggcaggta ttgaagtttg tcgatgcgcc gacgctggtg tgggtgcgtt
      301 ttaccgtggc ggcggcggta ttgtttgttt tgctggcact gggcgggcgg ctgccgaagc
      361 ggcgggattt ttcttggtgc tcattcaggc tgctgctgct cggcgtggcg ggcatttcgg
      421 caaactttgt gctgattgcc caagggctgc attatatttc gccgaccacg acgcaggttt
      481 tgtggcagat ttcgccgttt acgatgattg ttgtcggtgt gttggtgttt aaagaccgga
      541 tgactgccgc tcagaaaatc ggcttggttt tgctgcttgc cggtttgctt atgtttttta
      601 acgataaatt cggcgagttg tcgggtttgg gcgcgtatgc gaagggcgtg ttgctgtgtg
      661 cggcaggcag tatggcatgg gtgtgttatg ccgtggcgca aaagctgctg tcggcgcaat
      721 tcgggccgca acagattctg ctgttgattt atgcggcaag tgccgccgtg ttcctgccgt
      781 ttgccgaacc ggcacacatc ggaagtttgg acggtacgtt ggcgtgggtt tgttttgcgt
      841 attgctgctt gaatacgtta atcggttacg gctcgttcgg cgaggcgttg aaacattggg
      901 aggcttccaa agtcagcgcg gtaacaacct tgctccccgt gtttaccgta atattttctt
      961 tgctcgggca ttatgtgatg cctgatactt ttgccgcgcc ggatatgaac ggtttgggtt
     1021 atgttggcgc actggtcgtg gtcgggggtg cggttacggc ggcggtgggg gacaggctgt
     1081 tcaaacgccg ctagttcgca ggcaacggaa aatgccgtct gaacgaggtt tcagacggca
     1141 ttttatttga gggaaagatt agcgcggatg aaccatatcg gcaggaacga ccagttcgtc
     1201 aaattcttcg cccgtcagca agcccaactc aacggcggtt tcgcgcagcg atttgtcgtt
     1261 tttgtaggcg gttttggcga ctttggcggc gttttcgtaa ccgattttgc ggtttaacgc
     1321 ggtaacgagc atcagggaat ggtgcaggaa atagtcgatt ttttccggta cgggttcgat
     1381 gccgacggcg cagtgttcgt tgaagctgtt gcacgcgtcg cccaagaggc ggatggattg
     1441 caagaggttg taggcgataa cgggcatata gacgttcagc tcgaaattgc ccgacgcgcc
     1501 cgccataccg atggtaacgt cgttgccgaa cacttggcag cacaccatcg tcattgcttc
     1561 gcattgggtc gggttgactt tgcccggcat gatggacgaa cccggctcgt tttcggggat
     1621 tttgatttcg cccaaaccgc aacgcgggcc gcttgccagc cagcggatgt cgttggcgat
     1681 tttattcagg cttgccgcca gcgttttcaa tgcgcccgaa gcggcaacgg cggcatcgcg
     1741 tccgcccaag gcttcaaatt tgttcggcgc gctgacaaac ggcaagccag acagttcggc
     1801 gagtttagca gcagcttttt cggcgtattc gggatggctg ttcaaacccg tgccgaccgc
     1861 cgtaccgccc aaagcaagtt catacaagtc tttaagcgca tcgttcagac ggcctaaacc
     1921 gtgatcaagc tgggaaacgt agccggaaaa ttcctgtccc aaagtcagcg gcgtcgcgtc
     1981 ttgcaagtgg gtgcggccga ttttaacaat gggggcgaaa gcttgggctt ttttgtccaa
     2041 ggtatcgcgc agggctttta cggcggggat gaggtggcgg ttgatttcaa tcgcggcggc
     2101 aacgtggata gcggtcggga atgcgtcgtt ggtcgattgc gcgtggttca catggtcgtt
     2161 gggatggacg ggctgataag ccgccaaacc cgtaccggcg atttcgttgg cgcggtttgc
     2221 cagcacttcg ttcatgttca tattggactg cgtgccggag ccggtctgcc aaaccactaa
     2281 aggaaactgt ccgtcaagcc tgccgttcaa cacatcatcc gccgcctgcg taatcaaatc
     2341 cgcctgttcc ggcttaatcc tgccgaggga aacattggtc gcggcagcgg cttttttcac
     2401 caacgccaaa gcataaatca gcggctgcgg cagggtttcg ccgccgattt tgaaattgtt
     2461 gcggctgcgc tgggtctgcg cgccccaata ggcttcggac gggacttcga cattgcccat
     2521 ggtgtcgtgt tcggtgcgag tgttcatacg tttctccttt tgaaatgtga ataagagtga
     2581 ttcgcaaata ttataatgga gattggtgga atgaggaagc attaaggagg gagggtgtga
     2641 aaatgccgtc tgaaaagcgt tcagacggca tttgtttagg tgtgggttta cagcacggat
     2701 ttcactgtat cgaccacatt gtccacggta aagccgaatt ctttgaagag taagtcggca
     2761 ggggcggatt cgccgaagcg gttgatgccg acgactgcgc cgttcaaacc gacgtatttg
     2821 taccagccgt cggcgtgtcc ggcttctacg gcgatgcgcg gcagaccttc gggcaggacg
     2881 gtggcttgat aggcggcgtc ttggcggtcg aatacgttgg tggacggcat ggaaacgacg
     2941 cgtacggcga tgttttgcgc ggcgagggct ttttgcgctt ccaaagccag ctcgacttcg
     3001 gaaccggtgg caatgatgac ggcttgcgcg ttgccttggg cttcgctgat gatgtagccg
     3061 ccgcgtttga tgtcgttcag ttgttgttcg ctgcgcgctt ggaatttcag gttttgacgg
     3121 ctgaaaatca ggcaggacgg atgatcggcg gctttgacgg cttctgccca agccaccaga
     3181 gattcggcgg tgtcgcacgg acgccatacg tccatgttcg gaatcaggcg cagggtggcg
     3241 gtttgctcaa tcggctggtg ggtcgggccg tcttcgccca aaccgatgga atcgtgggtg
     3301 aacacaaata cagggttgat tttcatcagt gccgccatgc gcaaggcgtt gcgttcgtat
     3361 tcgctaaaca tcaggaaggt cgcgccaaag ggttttacgc cgccgtgcag ggcaagaccg
     3421 ttcataatcg cacccatacc gaactcgcgc acgccgtagt ggatgtagtt gccgcctttg
     3481 tcgcgggtaa cggagacgct gtttgaccag tcggtcaggt tggacggggt caggtcggcc
     3541 gaaccgccca ccaattcagg caactctttt gccaagattt cgatgctgtt ttggctggct
     3601 ttgcgggtag cgatggtttc ggctttggcg cacacttctt tcaatgccgt ctgaacgtac
     3661 ccgtcaaagt tttccggcag ctttttatcc atacggcgca caaattctgc ggcttcggca
     3721 ggatatttgg cttgatattg cgcgaacagt tcgttccagt cggcttccag tttcgcgcct
     3781 tgttctttgg cattccacgc atcgtaaatt tcttgcggga tttcaaaggc ggggtaagtc
     3841 cagcccaaat gtttgcgcgt ggcttcgatt tcgtccgcgc ccaaaggtgc gccgtgggtt
     3901 ttgtggctgc cttctttgtt ggcactgcct ttgccgatta aggttttgca gcagatgatg
     3961 gacggtttgc cggtttcggc acgtgcggct tcgatggcgg cttgaatggc ggcggtgtca
     4021 tgaccgttta cgttaggaac gacgtgccag ccgtagcttt caaagcgttg cgggatgttt
     4081 tcggtaaacc agccgtccac tttaccatca atggaaatat tgttatcgtc atacaaaaca
     4141 atcagtttgc ccaagcctaa agtgccggcg agtgagcagg cttcgtgcga tacgccttcc
     4201 atcaggcagc cgtcgcccat gaagacgtag gtgtaatgat cgacgatgtt caaaccgtct
     4261 ttattaaatt cggcggcaag gattttttct gccaatgcca tacccaccgc gttggcaatc
     4321 ccttgcccca acgggccggt cgtggtttcc acgccgtcgg tgtagccgta ttcgggatgg
     4381 ccgggggttt tgctgtgcag ttggcggaag tttttcaagt cttcaatgct taggttgtag
     4441 ccggtcaggt gcagcaggct gtacaacagc atagacgcgt ggccgttgga gaggacgaag
     4501 cggtcgcggt tgtagaattt ggggttggcg ggattgtgat tgaggaattt cgtccacaat
     4561 gtttccgcca tttccgccat acccataggc gcgccggggt ggccggaatt ggctttttga
     4621 acggcatcgg ccgagaggaa gcggattgcg tttgccagtt gagacatttt gtattttcct
     4681 tgctggtgtt tcggataagt ggataatcgg aaggcgttga ttatcgcccg attcgcttat
     4741 gctttcaaga aaagggcgga cgcgtgggaa ggcggcggca ggggacaggc ggggaaggat
     4801 tttcgatttg cgggcgaagc ctgccattat tccttttgaa ataaaatgtt atagattgtg
     4861 tgccggattg tcgatagcgt ttgtttatga gcttgcgccg tcggttctgc cgatatgggg
     4921 gtgtcggttt ttttagtctt ttttttaacc gtattcggat tttgttcggg cggtaaggta
     4981 aaatccaggc gttttgatgc ggatgggaaa tgtatccgcc ccatacatcc ggacggcgca
     5041 taaagttgta caatagcgga aatatatttt gggaaaaacg gattttctca aaacttgaaa
     5101 cacaacgcct taaaaaacaa gaaaaatgac gtctgaaaag caaacggcgg cggtaacggg
     5161 caaaccatca atcaaaaatc taaggaatgc agaatgacca cggaaaacca agccggcagt
     5221 ccggcatccg gaatcggcac gtccgaacaa acaaaagccg cgccgaaagc aaaaaaaaca
     5281 ttcgatccgc gagccagcgt gattcaaatc catcccgaag gcgaacgcat ccatccgaaa
     5341 aaggcggaag gacggttcgc caaactgcgt atcgccgccg tattggcgac gcagtttgtg
     5401 ttttacgtca ttccgtggtt caactggagc ggcaggcagg ccgtcgtttt caatatcccc
     5461 gaacggcatt tcttcatttt cggattgtcg ttgggggtgg gcgatttgat ttaccttgcc
     5521 ttgctgctga tgatttgcgc cttcgggctg ttttggtgga cgacgattgc cgggcgactg
     5581 tggtgcggct attcctgccc gcaaacggtt tacaccgaaa ttatgctgtg gatcgacaac
     5641 ctggtcgaag gcgatagaaa caaacgcctg aagctggaaa aatcgccgtg gaatttcact
     5701 aaaatccgca tcaaagccac caaatacctg ttgattttcc ttgtctgcgc gtggacgggc
     5761 atcacgtttg caggctggtt tgtccctatc cgccagttcg ttcccgattt attcactgga
     5821 gcagcaggcg gcggcgcgat gtttgccaca gcgttttacg gctttatgac cttcttcttc
     5881 gcacatatta tgcgcgaaaa agtatgcctg catatgtgtc cgtatgcacg tttccaaagc
     5941 gcgatgttcg acaaggacac gctgattgtt tcttatgacg cggaacgcgg cgaaccgcgc
     6001 ggagcccgca agaaaacggt caacaaggaa gaggcgggtt tgggcgactg catcaactgt
     6061 gcgatgtgcg tccaagtctg ccctgtcggc atcgacatcc gcaacggtct gcaataccaa
     6121 tgcatcggct gcgccgcctg tatcgacgcg tgcgatgaga ttatggacaa aatgggctat
     6181 ccgcgcggat taatccgtta tacgaccgaa agcgcgctgg aacacgaata ttctgaaaaa
     6241 gacattaaaa aacggctgct cagaccgcgc gtggcaggtt acggcgcggt gttggcgtta
     6301 gttatcattg ccttcctggc cggtttgtcc acgcgcaaaa tggtcgaggt cgatattttg
     6361 aaagaccgtg gcgtactggt gcgcgaaaac gccaaaggct ggctggaaaa cgcatacagc
     6421 ctgcgtatca tcaacaaaag tgaaaaagaa cagctcatta ccgcaagtgt caaaggcttt
     6481 gacgaaatcg ccctgaccgg gctgcccgaa ggcggtatca aggttgcccc gcgcgaaacg
     6541 gtaacccttc ccgtccaagt gtccaccatt ccggaatacg cggacaaagg cagccaccct
     6601 atcgaattta ccttccaata ccgcgaaagc ggcgcgcccg acggcaagcc ggtcgtcttg
     6661 gaagaagatg caacctttat cggagaataa ccgtgtctca aaacactcca atcaaacctt
     6721 ggtacaaaca cgtctggccg tggatcttga tggcggggcc gatttttgtc gtcatcgcca
     6781 gcgtcgctat gttttttgtc gcacagcagc acgcgacaga tttggttacg gacgattatt
     6841 ataaagacgg caaacatatc gacatccagc ttcatcggga tgaagaagcc gtcagacggc
     6901 atatcggggt gcaggttctc atttcccccg atatgaatgc ggcaaaagtg tttgtcggcg
     6961 gcgagtttga cggcaaacag cctttgaacc tgctgctgat gcacccgacc cgcaaggcgg
     7021 acgatcaaac cgtcgccctc aagcccgtcg gcagcgcgca gaacggcagg gcggaatatg
     7081 aggcggtgtt caaaaccctt tcgccgacca accactggta tgtgcgcgtg gaggacgcgg
     7141 caggcgtgtg gcgcgtcgag aacaaatgga ttaccagcca aggcaatgcg gtggatctga
     7201 ccccgatgga taaacttttc aataatgccg gaagcaaata aaaaagccgt gttttcattg
     7261 cattggtttg ccagatgcaa tgtcgggcag gcattgtttg attattcggc gtgatggtct
     7321 gatttatcgg acgaaaataa atgtatctca tcccgtttat tttttaacac tattccagaa
     7381 cgcagcctga aaaatgccgt ctgaagggct tcagacggca tttgtgttgt atgcccgaca
     7441 caatgcggaa ggcgttttgt ttacataaaa acgtttttat ttctctccgt tttttcgaca
     7501 ctattccgaa acgcagcctg aaaaatgccg tctgaaagcc cttcagacgg cattttgttt
     7561 gcaaatcaaa tcctacctga tgtcagcgtc cgagcgttgc aacaggttcg ctccccgtca
     7621 gcagatattg tatcgtctcg cggacggtgc ggatggcatt accgaagggc agcgggtctt
     7681 tacctctgaa gaacaggcct ttatctactt ctccacgaaa tgcggcagca agctggatat
     7741 caatacagaa ttgccctgct ttggaaagcc cgtcgcgcag gccgcagcta gtcaggcagt
     7801 ttaaaccttg ggtacagcgg cgcgggtcgg ctttggcgtt tgtctgaagt ttgctttcac
     7861 gcttgatgta gctgtctagg aatttggtgc ggacaccgcg cgccggcaaa ccggcaacag
     7921 acataaattc gactactttt tcagtttccg caccggcgag cgtttttttg aagttaaggt
     7981 gtgcatctcc ttcttcggta acggcaaaag ccgtaccgat ttgaacggcg gatgctcccc
     8041 agttctttag ggcggttttg actttttcaa aatttgccat gcctcccgca agaataagcg
     8101 ggattttttc gctttccagc cctaaacttt tgaaaacttc aaacgtttcc tcaatcacgc
     8161 gtttgaagtc gaacttggca tcgtttacgc cttcaacggt tgatgcaccc aaatgtccgg
     8221 ccgcgtgggc aggatgttcg actacaatcg catcgggcaa tatgcctttt ttcatccaac
     8281 gtttcaagac gatattaata ccgcgcgatt cggacagaat cggcagcagc gcgacatatt
     8341 tatgatagcc ctcggtcatt tccggcaggt ctaaaggcag accggcaccc attacaaccg
     8401 catccgcccc tgattcgcaa gcctggcgga catatgcggc gtggtctttg accgccttca
     8461 tcacgttgac cgcaatcagc ccttttccct ctgaagcact tttggctttt tggatttccc
     8521 tgtccaatgc ggtacagttc aaagacgtat atttctcttc actcggattg atttgggatt
     8581 cggcgagtag gtcttcgtga aggtggcgca aatccacact ggcaatcgtt ccgataccgt
     8641 tttcacgtgc caccgcgctg gataaacccg atgcggaaac accgaccccc ataccgcctt
     8701 gcacgatggg ggtaagggat tttccacgaa taaccaaagg gtcaaaaata ttttgcatca
     8761 gtttctccga gtatacgaat cagtcaggct catgaaaaat ggttctaact gttttagaac
     8821 tattgctcaa atttggtatt atactctaaa tatcgcggcg gtaaacaaga aagcagccgg
     8881 agcttcgggc atattctgtt acgcctgttt caatcgggag agaaaatatt atagtgaatt
     8941 aacaaaaatc aggacaaggc gacgaagccg cagacagtac aaatagtacg gaaaggcgag
     9001 gcaacgccgt actggtttaa agttaatcca ctataaattt gatgatggca taaaaaagcc
     9061 ctagtcagtt gctgtcaaag gggattgtta agaaaagtaa tgccacgttg atggggtgca
     9121 atatatcagg cgtttcaatc gggtaaaatg ttggacggac accgcatccg gttacgtgat
     9181 atcggtttgc acggcaaagg tttgaatatg attcgattac gtctgagagt ctgatgaagg
     9241 gggtaggtaa agatatggta atgaattgcc gaggcaataa aaatccccga gggattattt
     9301 cgggggattt ggaatttggc acgcccacgg ggaatcgaac cccggttacc gccgtgaaag
     9361 ggcgatgtcc taaccgctag acgatgggcg catattgtat tttcttactg gcgcacccgg
     9421 agcgattcga acgcccgacc ctctggttcg tagccagata ctctatccaa ctgagctacg
     9481 ggtgcactgc aagaaagatt tgaattttag ggtaatcatc ggattctgtc aattgttttg
     9541 ttggatgaaa tgccttaaaa gtgtaaaata tcggtttgtt gtttgaattt aaagagaata
     9601 aaatgattgt tgcttcccgc tggcccttgc tggaaaaggt atttttacgg tttggaatgc
     9661 ctgttgccgt ggttgatttg gaatcgacgg gcggcaatct gtatgaagac agggtaaccg
     9721 aagtggcttt ggtcaagttt gagcagggaa gggtggtgag gcatgagtgg ttggttaatc
     9781 ctcaaaaacc gattccgcag tttgttgcgg ggctgacggg gatttcagac ggcatggttg
     9841 ccgacgcacc tgtttttgca gagattgccg gcgagttgtt ttcggtattg aagggttgtg
     9901 tgctggttgc acataacagc cgtttcgact atacgttttt aaagcatgag tttcatcgtg
     9961 cgggtatcgg attttcatcg cctgctttgt gcagtgtgca actgtcccgg tgtctgtatc
    10021 cgcaatttta caagcacagc ctggacagta tcatcgaaag gttggggatt gttgtggaag
    10081 acaggcatcg tgcgatggcg gatgtatcgg cattgtgcga ttatttggaa tacagtctgt
    10141 cggaacacgg ggtcgaggca tggatcaggc agtgtttccg tttgatgaat ccgaaaccgc
    10201 tgcctgccgc gctgcccgaa cggttgaggg aacagttgta cggtttgcct gacagtatgg
    10261 gggtgctggc ttgtttcgac ggaggaggga aagtaaatta catcggtacg tttgaacggg
    10321 tatatagcga ggtttcggct ttattggatt ccggaaaagc ctcgtttgat tggtgcaata
    10381 cggaggcagt ccgttttttt cccgcattgg gcaggctgca tgcatataag attaaagcgg
    10441 aattggtcag gcgttatcat tcgggttgtt atgtgtctgc caaaaatctg ctgaaaacat
    10501 ttacgaccgt caggtttgaa aaaggttcag acggcatgtt gaatgcgaaa acaacggctt
    10561 tgaaaaacgg tgtgacggat aatccgccta ccggattatt tgccaataaa aaggcagcga
    10621 gacgggcttt gtcgtcgtgg gcggaaacat acggattgtg tcctgccgca gccggtatcc
    10681 tgtcggacgg ttatacagag gatgagcctt gtcccgtata tgtttcaggc cgatgcgata
    10741 aggcgtgcgg ccgttctgac gaacaggttt tggcgtttgc acacaagttg cctattttgg
    10801 attggggaaa aatgcatgag gtagaaatta ccgaaactga tcctttaacg ggggaaaaag
    10861 ttgttctgca tggaatgggc ggcgcattgg aaatgggtga cgggctttgg tatttcgata
    10921 aagatttacc ggatgcgttt aaggcgaagt ttaaaacgga caggaaaaat attaaggaaa
    10981 tcggttaaat cgataccggt tgatgaaagc cggtaagtat gtaaacagcc gttcgtattg
    11041 attgcctaat cggtttgggt tggaatgtgt tgccgtttgc aggtaatgtg tccgaagatg
    11101 ccgtctgaat tttttcagac ggcatttttg ccgacgcggt tttcgtgccg tgtcggtttg
    11161 ctcttccaac cgaaggcatc ggacaagcag ggtggttttt agaagccgtt ttccatcatg
    11221 atttgaccag gaatgcggtt gcggtgcatg gcgtaaccca tgtcaagcag cgtttggaag
    11281 gtgtctttga ctatttccgg attgccgcaa atcataaacc gtgtggattc gggggtaaac
    11341 ttggtatgca gcgcctgttc gatgctgttg ttttttaaga gttccggaat gcgttttccg
    11401 cctaagcccg aggggttggc ggcacgggtg gtaacaggga cgaaacggaa cgagtgtccg
    11461 tattcgccta ccaggggatg ttcggccaat gcggcgagcc ggtcgttgaa aatcaattct
    11521 tcgggaaaag atacggaatg tatcaggttg acggtatcga aacgctgccg gatttcgggt
    11581 tgttcgagaa tggaaaggaa gggggcgatg ccggagccgg tgcagagcat caccaaatcc
    11641 ttgccgtcgg ggaagcgttc gggcaggagg aagccggtgg catttttatc gagcaggatg
    11701 gtatcgccct gttgcatttt ggcgaaacgg gccgacatgg ggccgtcttg gatgagtacg
    11761 gcaaaatatt cgagcgtgtc ggcatattct gcggaaacga tggagtaggc acgccaaata
    11821 aagccttccc cttcgtagaa accgagtcgg gagaactgtc cggctttaaa acggtaggat
    11881 tcgggacggc tgatggcgaa agtgatgagt ttcggcgtgt ggtgtttgac ccacaaaatc
    11941 ttttcttcag tgaattttgc ttcgggcgag gctgccatgt tgttgtcctt gagtgtgttt
    12001 gtcgggatta tagccaattt gggtgttttt ttccgcattg acggtctgag acctttgcaa
    12061 aattcctttc cctcccgaca gccgaaaccc aaacacaggt tttcggctgt tttagcccca
    12121 aatacctcct aattttaccc aaatatcccc ttaatcctcc ccggataccc gataatcagg
    12181 catccggacc gccttttagg cggcagcggg cgcacttagc ctgttggcgg ctttcaacag
    12241 gttcaaacac atcgccttca ggtggctttg cgcactcact ttgagcagcc cgaaataggc
    12301 tgcccgcgca tagcggaatt tacggtgcag cgtaccgaag ctttgttcga ccacataacg
    12361 ggtcttcgac aaataccggt tgcgtttggt ttgcacttcc gacagcggcc ggttgcggca
    12421 ggctttgcgc ataatgccgt ctaacaactg atgttcttcc agatgttgcc ggttttccgc
    12481 actgtc
//
LOCUS       DBBZXW010000052        12368 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.052, whole genome shotgun sequence.
ACCESSION   DBBZXW010000052 DBBZXW010000000
VERSION     DBBZXW010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12368
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.052"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..334
                     /locus_tag="ACJJD2_001298"
     CDS             <1..334
                     /locus_tag="ACJJD2_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG7579832.1"
                     /translation="DASGLGEKIKDGKKTVLSCEEEQKICNTFTNKQAVEDFSVVIGY
                     DEIKAKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAELEKEIKDR
                     LAMLKFNS"
     gene            366..482
                     /locus_tag="ACJJD2_001299"
     CDS             366..482
                     /locus_tag="ACJJD2_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HGG7579833.1"
                     /translation="MPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYRK"
     gene            complement(642..1979)
                     /gene="ribBA"
                     /locus_tag="ACJJD2_001300"
     CDS             complement(642..1979)
                     /gene="ribBA"
                     /locus_tag="ACJJD2_001300"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HGG7579834.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGAALLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            2088..2222
                     /locus_tag="ACJJD2_001301"
     CDS             2088..2222
                     /locus_tag="ACJJD2_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579835.1"
                     /translation="MPSEAGFVASDGIAAILAGRGLFVPTSRALLIWGLPEAYSEKNF
                     "
     gene            complement(2201..2857)
                     /locus_tag="ACJJD2_001302"
     CDS             complement(2201..2857)
                     /locus_tag="ACJJD2_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 2"
                     /protein_id="HGG7579836.1"
                     /translation="MILHPSSLNYHVIPKGADFSDNDFVRHFETLVEGRYYIANAWTK
                     IVRREIIIKNNLFFPKGYIHEDFPYSLKLARFVKTFAFYDNPFYQYRVLGNSISHNVK
                     YKNFSDMLAHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNIILIY
                     RKYFSFKEKCRKIFGAKTIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKFFSE
                     "
     gene            complement(2854..3213)
                     /locus_tag="ACJJD2_001303"
     CDS             complement(2854..3213)
                     /locus_tag="ACJJD2_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7579837.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGGFSLIYNNLQTKRLI"
     gene            complement(3369..3962)
                     /gene="ribA"
                     /locus_tag="ACJJD2_001304"
     CDS             complement(3369..3962)
                     /gene="ribA"
                     /locus_tag="ACJJD2_001304"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HGG7579838.1"
                     /translation="MSELLNYVASCRLPTEWGVFTMHGFEEANGQEHVALTVGDFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(3955..4629)
                     /locus_tag="ACJJD2_001305"
     CDS             complement(3955..4629)
                     /locus_tag="ACJJD2_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579839.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRTAYLTAQTVMDMGTTSIERSV
                     LWLEHEDWRLADYLEQNSGNEEGLKRLFMALDSVFSRCKGVRAAAVYALMPSENAAFR
                     LVCLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            4783..4867
                     /locus_tag="ACJJD2_001306"
     tRNA            4783..4867
                     /locus_tag="ACJJD2_001306"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4817..4819,aa:Leu,seq:tag)
     gene            5387..6421
                     /gene="purM"
                     /locus_tag="ACJJD2_001307"
     CDS             5387..6421
                     /gene="purM"
                     /locus_tag="ACJJD2_001307"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HGG7579840.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDMVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
     gene            complement(6895..7551)
                     /locus_tag="ACJJD2_001308"
     CDS             complement(6895..7551)
                     /locus_tag="ACJJD2_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7579841.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLNMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
     gene            complement(7548..9320)
                     /locus_tag="ACJJD2_001309"
     CDS             complement(7548..9320)
                     /locus_tag="ACJJD2_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HGG7579842.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFSDGISLTGDDRTLLQTLIRQLGVSLASAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENISFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            9526..10140
                     /locus_tag="ACJJD2_001310"
     CDS             9526..10140
                     /locus_tag="ACJJD2_001310"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HGG7579843.1"
                     /translation="MKTSNFSKRTSAMKTFALILADGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPDDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQIDLQEG"
     gene            10303..10920
                     /locus_tag="ACJJD2_001311"
     CDS             10303..10920
                     /locus_tag="ACJJD2_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HGG7579844.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            10928..11791
                     /locus_tag="ACJJD2_001312"
     CDS             10928..11791
                     /locus_tag="ACJJD2_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7579845.1"
                     /translation="MELNEFFDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(11804..12238)
                     /locus_tag="ACJJD2_001313"
     CDS             complement(11804..12238)
                     /locus_tag="ACJJD2_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HGG7579846.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
BASE COUNT         3036 a         2926 c         3347 g         3059 t
ORIGIN      
        1 cgacgcatcg ggcttgggcg aaaaaattaa agacggcaaa aaaaccgtac tttcctgcga
       61 agaagaacaa aaaatctgca atactttcac gaacaaacag gcagtggaag atttcagtgt
      121 ggtaatcggc tacgatgaaa tcaaagcgaa gaatcacagc ttgtcggcgg ggcagtattt
      181 cgaggtaaag attgattatg tggatatttc cgccgacgaa tttgcgcaaa aaatggcggg
      241 attttcagcg gatttggata aacttttcgc cgaatctgcc gaattggaaa aagagattaa
      301 ggatagattg gcgatgttga aattcaattc ataaataccg atgaatgaaa ccggtcaaac
      361 ttaaaatgcc gtctgaaagc ctttcagacg gcattttgtt tggtttggaa aatacttatg
      421 ccgttctttc cctgaaagag agaatccaaa aaaccaaagc cacaggaatt tatcggaaat
      481 gacaaaaacc cgacgaaccg gattcccgcc tgcgcgggaa tgacgaatta gaagttaccc
      541 gaaatttgca aaaacaaaat ccaacccaac agaccgggtt ttcgtttgca cggaaataat
      601 gcaataaata aagcaaatat aaagtatttg aatttactat attatttttc cgcttcttca
      661 aagccgacga cttccaaacc gaagccggtc aggccggtga aagatgaggg ctgcccgagg
      721 acgcgcagtt ttttgacgtt gaggccggcg aggatttgcg caccgatgcc gtagcttttg
      781 ctgtcccatt tgtaggcttg gtttgcacct ttgggcaggg tgcggtcgag cagggcggcg
      841 ccgtcttcgg tgcggtgcag aaggatgact acgccgcttt cggcctgttg gatgcgctcg
      901 agtgctttgg gcagcgacca tgaatgacgc gggttagctt ggatgaagtc catgacgctg
      961 aagggttcgt ggacgcggac gagggtttcg gtgtcggcgg agggcgtgcc tttgacgagg
     1021 gcgaggtggg tttcgccgga gagtttgtcg acgtaaacgt gttgttggaa ctcgccccac
     1081 ggggtttgta caggcgcatt gcccatgtct tcaagcaggc tttcggtacg gctgcggtat
     1141 tcgatgaggt cggcaatcgt gccgattttg agcttgtgtt cttcggcgaa tttcatcagt
     1201 tcgggcatac gcgccatcgt gccgtcgtcg ttgatgattt cgcaaataac ggaggcagga
     1261 atcagcccgt tcatttgcgc caggtcgacg ccggcttcgg tgtgtccggc gcggacgagt
     1321 acgccgcctt tttgggcgcg aagcggaaag atatgaccgg gttggacgat gtcttcgggt
     1381 ttagcggtcg gggaaacggc ggtttgaata gtcagggcgc ggtcggcggc ggaaatgccg
     1441 gtggtaatgc cgtgtgcggc ttcgatggag acagtaaagt tggtgccgta ttgcgcgccg
     1501 tttttttggg tcatcatcgg cagcccgagt ttttcgacca tttcgccgtc catcggcagg
     1561 cagaccaagc cgcgcgcgtg tttgatcatg aagttgatgg cttcgggcgt gacgaattgc
     1621 gccgccatca gcaggtcgcc ttcgttttct cggtcttcgg catcggtgat gatgaccatt
     1681 ttgccggctt tgatgtcggc taggatttcg gggatggggg aaatatggga catggtgtgt
     1741 tttcctgtgt gttcgggcgg gcgggcggtg tgttcggtat cgagccagaa ggcgggcatt
     1801 tttgccgcct gttcgatttt acgggctttt ttctcgccga aggatttgtt tttcaaaagg
     1861 gcggagagtt cgcctgtgtt gagggcaacg gcttcggcaa aacgggtttg caaaccgccg
     1921 tagtgttctg ctatccattg ccgcaggttg cggcggcgca gaccggctgt gtcggtcatc
     1981 gtttcatcct ttgtagaaat cggatgtagc ggattgtaat cgcgtattta ccaaaaagca
     2041 aatctgtttt tttcgccaaa ccgaattatt tgctttttgg taaacagatg ccgtctgaag
     2101 ccggattcgt ggcttcagac ggcattgccg caatccttgc cggccggggg ctgtttgtcc
     2161 caacttcccg cgcacttctg atttggggtt tgccggaagc ttattccgaa aaaaatttct
     2221 gataaacggc cttgattgcc gggtacagca taggcggtac gagcaggcgc aatatcggca
     2281 atcctatgat gaatgcggtc ttcccgataa aaaccggacg gattgtcttc gcgccgaata
     2341 tctttctgca tttttcttta aatgaaaaat atttccggta gatgaggata atgtttttgg
     2401 aaaaataaag ccttaccaat atagacctca gatagccgat attgtcgaag acaaattttt
     2461 gcaaaccgcc gtagatgggg gaatttttgt tttcgactaa aaaatccaca ccccggtcga
     2521 gatgcgccag catatcgctg aaatttttgt atttgacgtt gtggctgata gagttgccga
     2581 gaacgcggta ttgataaaaa gggttatcgt aaaaggcaaa agtcttgaca aaacgcgcca
     2641 atttcaaact gtacgggaaa tcctcgtgaa tgtatccttt tgggaaaaac agattgtttt
     2701 tgatgattat ttcccgcctg acgatttttg tccacgcgtt ggcgatatag taccgcccct
     2761 ccaccaacgt ttcaaaatgg cggacaaaat cattatccga aaagtccgcc cctttgggga
     2821 tgacgtggta attgagggac gagggatgca ggatcaaatc aacctttttg tctgcaagtt
     2881 gttgtaaatc aaagagaatc ccccccccgc gttttttgaa cggttggtat cggcccaata
     2941 atcgtcgctg tccaaaaaga ttaggtaatc gccttttgcc gcccggatac cggcgttgcg
     3001 ggcatccgac agcccgccgt tttcttgatg aatcactttt atatgcggat atttgcctgc
     3061 atattcgtcg caaatcttcc cgcagccgtc cggcgaaccg tcatcgacca aaatcatttc
     3121 ataatcggca aaattttcgg caagcacgga atccacgcag cagcggaggt atttttccac
     3181 attgtaaata gggacgatga tggagaaaat cataaatatc aatccattat attaagatgt
     3241 ttgcgcgtat gcctcaaacc cgcgctcgca atgcgtttgc atccactata aaacttattg
     3301 ctttatcaag gtatggaaac ctgtttcccg aaaggcggcg caggatgccc gttccctgca
     3361 actttgcctt attccgacat cagatgtccc agcttgtctg ctttggtttg gaggtagcgt
     3421 ttgttttcaa ggttttcccc gacgtgcagg gggatgcgtt cgaccacgtt aatccccgca
     3481 tctttcaggg tttggatttt ttcggggttg ttggtcagca gtttgaccga gcggatgccc
     3541 agatattcgt agatagattg cgccaaacgg aaatcgcggg catcgacggg cagcccgagt
     3601 gccaaattgg cttcaaccgt atccatacct tggtcttgca gatgataggc gcggattttg
     3661 ttaatcagcc cgatgccgcg tccttcctga cgcagataga cgatgatgcc gcgcccctct
     3721 gtctgtacgg ccctcatggc cgcttcaagt tgaggtccgc agtcgcattt tctcgagaac
     3781 agcgcatcgc ccgtcaggca ttcggagtgg atgcgcgtca gaaccggatt gccgtctgaa
     3841 aaatcaccga cggtcagcgc gacgtgttcc tgcccatttg cctcttcaaa gccgtgcatc
     3901 gtaaatacgc cccattcggt cggcaggcgg caggaagcaa catagtttaa taattcagac
     3961 attttcatct ccttctgcgg cagtgatgcc caaaagctgc ttcaaaggtt cggacaaagc
     4021 caaggcaaga gccacccatt ccacctgtgc tgccgtaccc gcacactctg cgcattcaaa
     4081 ttccacatga accacgccca acacaccgcc actttccgtg cagaccggaa tggaaatttg
     4141 cgccgccgaa gcatgattgc gttctcccga aagctctccc aaatccaacc aacggcgtac
     4201 atccgaggca acattcatcc agccgctttg cgccgaacgg caagccagcg aaaccttgcc
     4261 tgccgcttca tccaaatccc acaggttttc caaaacctcg ccctgccggg acaggcaaac
     4321 cagccgaaag gcggcatttt cagacggcat cagggcataa acggctgcgg cgcgcacgcc
     4381 tttacagcgt gaaaacaccg aatccaaagc catgaaaagc cgtttcagac cttcctcatt
     4441 cccgctgttt tgctccaaat aatcggcaag cctccaatcc tcatgctcaa gccacaaaac
     4501 cgaacgctca atcgaagtcg tccccatatc cattaccgtc tgcgccgtca gatacgccgt
     4561 ccgaacctcg tcaagcggca gcttcaaacc ctgagtcagc agaaaatcct taatcaaagc
     4621 agcaggcata cccaaattcc gtcaataaaa acaaaaaacc gcccgattcc gatgtcaggc
     4681 ggacgaaaaa cagattttac cgccccaaac cccaagccat caacagcccc gccgaaaacc
     4741 ttgcacaaaa aaacaaaatc tgtataattg tccaattccc atgcggacgt ggcgaaattg
     4801 gtagacgcac cagatttagg ttctggcgcc gagaggtgtg agagttcgag tctctccgtc
     4861 cgcaccaata atgataaata aatcatatag ttaatgctta tcgggacaaa ttagtgccac
     4921 aaaacataag tcgtctgctt ttcagcgggc ggctttttta tctgcctata tgtttcaaca
     4981 cgcagaacgg tacataaagt gccgccattt gttctacccc gaatcagaag cgggtgcttc
     5041 cgcccgcaat cagattcacc gcccctaatg ccggggtttc aactggaaag aagaaaatat
     5101 tgattttgat gatggcatca aaaaacccct tccgcccgtc tgccaaaagg aatggttaag
     5161 aaaagcaatg cgtcttttga tggaacgcga tatataagga attgagggga agggcaggcg
     5221 ggtttctgcc cgttaatcct gcggacgatc ccgccaaacc cgacacgcgc gggcatatgg
     5281 cggattgttt acaatattgt ctaaaaatct gaacctgcaa acgtgaaata aggtagaata
     5341 cgccccgtta ttttaccgtc caatccccat ttaccaagga aaaacgatga gtacttcatt
     5401 gagttaccgc gatgcaggtg tcgatatcga cgcaggcgac caactggtcg aaaacatcaa
     5461 accgtttgcc aaacgcacca tgcgtccaga agtattgggg gatttgggcg gttttggcgc
     5521 attggtcgaa atcggcaaga aatataaaaa tcccgtattg gtcagcggta cggacggtgt
     5581 gggtaccaag ctcaagcttg cctttgattg ggataaacac gatatggtgg gcatcgacct
     5641 tgttgcaatg agtgtcaacg atattttggt tcaaggagca gaacctctgt ttttcttgga
     5701 ttatttcgcc tgcggcaaat tggatgttcc gcgcgcaacc gatgtcatca aaggcattgc
     5761 acaaggttgc gaagaatccg gctgcgccct gattggcggg gaaactgccg aaatgccggg
     5821 catgtatccc gtcggagaat acgatttggc gggttttgcc gtcggcgtag tggaaaaaga
     5881 gaatgtcatt accggccgca gtatcggcgc gggcgatgtg gtattgggtt tggcttccaa
     5941 cggcgcacat tcaaacggct attcccttat ccgtaaaatc atcgaacgcg acaatcccga
     6001 tttggatgcc gagtttgata atggcaaaac cttgcgggag gctgttattg cgccgacccg
     6061 tctgtatgtg aaaccgattc ttgccgcttt ggaaaaattt accattaaag gtatggcaca
     6121 cattaccggc ggcggcatta ccgaaaacgt gccgcgcgtg ttgcctgaaa acacggttgc
     6181 acaaatcgat gctaaatcgt gggaattgcc caagctcttc caatggcttc aaaaggcggg
     6241 caatgtggaa acccaagaaa tgtaccgaac ctttaactgc ggcatcggca tggtcgttat
     6301 tgttgctgcc gaagatgccg atgcggttca gggtctcttg ggtgaacaag gtgaaacagt
     6361 ttaccgttta ggtttgatcc gtgagcgtca gggagacgag catcaaaccc aggttgcctg
     6421 attgcttcta tagcgaaatg ccgtctcaaa catgggtttg gacggcattt ttatagagga
     6481 ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt acagatagta cggcaaggcg
     6541 aggcaacgcc gtactggttt ttgttaatcc actatatatt gattgatatg agggtgggtt
     6601 acacatgctt aaacgatata agccattgta tatttatggg attcggaatg gaacatttta
     6661 ccctgcatta gtatttccgc tttttattat gccgtctgaa aatatcatga tgatgcgttt
     6721 tcagacggca tagttgatat tgcagtatca gataggggca aacggaaaac actaaaccga
     6781 acaatattac tgctatgcca agcgtactta tgggggcata aacttacatg cttggtctgt
     6841 tatccgaatg accgtacggg gattaaaacc cctaatatgc cgtctgaacc cgccttattc
     6901 cggcacaggt tgggggacgt tgtgccggat ggcgtaaacg gcggcctgca cccggctgct
     6961 gaggttgagt ttgcggagca ggttttgaac gtggactttg acggtggatt cggcaagatc
     7021 gaggtggcgg gcgatgattt tgttgctgtg tcctgcggcg agatagccca agatttccag
     7081 ttcgcgaggg gtaagtgagg agagtgcctg tgtcccttgg gcaggttggg gggaaatcag
     7141 gcttttaacg agtttggcgg tcatctcggg cgagaataca ttatcgcctt cggcggcttt
     7201 gcgtatgctt tcgagcagaa agtcagcgtt gatgtttttc agcaggtaac cgcgcgcgcc
     7261 gatgcgaata cattcggtca agtcgtcgct gtcttcggaa acggtcagca taatcactgc
     7321 ctgctgcgga ttgatgctga tgatttggga gagtgcttcg cgtccgttca tgccgggcat
     7381 attcaaatcg agcaggacga catcgggttg cagccgacta atcattttga tgcccgagag
     7441 gccgtctgcg gcttcgccga tgacttcaaa accgtgttgg cgcgacaaaa gggctttaat
     7501 gccgctgcgg aagagggtat ggtcgtctat cagaataatt ttaatagtca tttcaagctt
     7561 tcttcagatg caaccgtcaa tgagacggtg gttccctgtt gagcttggga acggatttct
     7621 aaaacggcat ggatgcgttt ggcacgctcc tgcatgatgt gcagtccgac atggctgccc
     7681 gtgggttctc ctattttctc cgtgtcgaaa ccttgtccgt tgtcttggat ggtcatggta
     7741 aagcgtccgc cgtgttcgga aagggtgaat tttacatggg tggcgcgggc gtgtttgcgg
     7801 atgttggaca ggctttcctg caggataaaa atcatttgga gctgcgcttc ctgaggcggc
     7861 aggaacgaac cgttttccca ggcggtttcg accgttatcc cggtttgttg cgtaaagcgg
     7921 gcgaataggt cggcaacggc ttcgggaaat tctttattgc tgattttggt acggaagttg
     7981 agcagcagtt cgcggacatc ttcataacat tcctgcacgc ctgttttgat gaagctgatg
     8041 ttttctgcgg cttcctcccg tttgttttcg gcaaaggcgg tttccagcat ctgtacctgt
     8101 aggtttagga acgttaatgc ttgtgcgatg ctgtcatgta atccttgcgc aatcaggttg
     8161 cgttcctgca atactgcaag caggcgtttt tcttcttcct gcttcgcgct agcgagcgat
     8221 acgcccaatt gccgaatcag ggtttgaagc agcgtgcggt cgtctccggt gagggaaatg
     8281 ccgtctgaaa agctgagcaa cagcctgccc aatgtttcgt tctggtactc aatggggaag
     8341 atttcctcat ggtacttccc caaatccgaa gctgctgtgc cgcaatccgc atgatgaatg
     8401 gaaacataaa catcggatcc gccgtccaaa caaactctgc cggaatctgc tcctacggcg
     8461 ggcaggatac ggtttagaaa atgttctgca gcctgttgcg gtatgtagga ttggtgcagg
     8521 tcccgtgtag tttggtacag cagggtcagg ttttgatttt gtttttcgag actgcgtgtc
     8581 tgctcggcga cttgtccttc caaatcatca tataaaattt tcaacctgcc gcccatttga
     8641 ttgaaacaac gcccgacctg tttgaattcc ggcgtaccgc cttcgggaac cggaatatcg
     8701 aaacacctcc gtccgatgcg ttccgcacct tcccttaacg cctgcagcgg ccggataacc
     8761 caaatctggt gccaaaacag catcagtaca gacgacacca gcgtcatcaa cataattgcc
     8821 cattgaaaac gcctgagcca ccatgtgttt ttttcgttgg cattttccaa tgcctgcaaa
     8881 aacagttcga tgtttccggc aaagcggtag agatcgacct gagtcggtcg ccggtaggac
     8941 tggagcgggg ggaggatgtg tgcctgccaa tctataatca gcatggattg tatcaaatca
     9001 taagcaagag gggtgtccga aggaatcagc ggatggatgg catcactttg tgaaatacga
     9061 ttcaggcttt tttcaaattc gtcaacctga ttgtctattt gggagcgggg agatccttca
     9121 cccgccatgt atgccagacg gtatgcctgc attctcaagt tgcccgcctc ttcgatgacg
     9181 gaggccgcgt tttccagacg caaagagagc agcagtgtca aaacgacaga caatgccgcc
     9241 aacccgaccc acactccggt caggagtttc aggcgtaggg aaaggctgat gccgtctgaa
     9301 aaacgggctg gcagtatcat gctcggcgaa aaattgttct aaataatgca aacaatatca
     9361 ttctttggga ttagatacaa ctgctcagaa agaattggtt aaggaaaact taatccgcac
     9421 cgcttcagtg ttaaatcatg ttatgataaa attcagataa tatgaattta tttgccatct
     9481 gcttcagacg gcattttgag tcattgggaa cggcagactg caatcatgaa aacctcgaac
     9541 ttttccaaga gaacatccgc aatgaaaact tttgccctga tactggccga cggtcaggcg
     9601 agccgtatgg gaggcgagga caaggggctt gctcttttgg ggggtaaggc actgatagac
     9661 catgtcatcg acagggtcag gccgcaggtc agccatatcg ccatcagcac caaccggaat
     9721 ttggaagaat atgctcgaag aagtccgcat atttttcccg atgcgcggca gtggcagcat
     9781 ttcggcccgc tttcggcatt gtgtaccgca gccaacgatt tgcagttggc gactgctgac
     9841 tggcttttgg ttgtgccgtg cgatatgccg tatctgccgg acgatttggt ggcgaggttt
     9901 gaaaccgtgt cgaaacgcac accgttgtgc aatgcgtatt atgtggaaac gccgataacg
     9961 atgcactaca acattatgta tatccgcccg cagattctgc aaagcgcgat tccctatctg
    10021 ttttcgggta tgaaaacatt aagaagctgg ttgcagcagc aaagggcgcg gtcggtcaga
    10081 ttcgagtttg acgggcattt tgccgacttg aacacgcaaa tcgatttgca ggagggataa
    10141 gggcaagacc gccgaccggc gtggaaagga aaggtcaagc cataccgggc ggtttttgcc
    10201 cgaatcggag gcataatgct gtctgaaggc atttcagacg gcatttttcg cggggagatg
    10261 ctacaatttg caccattttt accgacacag ggaaacagga ttatgtttac aggcattgtt
    10321 caaggattgg gaaaactgac ggcaatccac cgcccgtcgg aggcatttca cacttatgtc
    10381 gtcgagcttc cgcaagaggc ggcggacaat ctgcaacgcg gcgcatcggt cgccaataac
    10441 ggctgctgcc tgacgattac cgaaatcgaa ggaaaccgcg tcagtttcga tttaatggcg
    10501 gaaactttgg caaaaaccaa tttggggctg ctgaaggaag gcgattgcgt caacatcgaa
    10561 cgggcggcgc gtttcggaga cgaaatcggc ggacacgtca tgagcggaca cattatggca
    10621 accgtgccta ttgtcgaaat cgaacgggac gggttcaacc gcacggtttg gttttcgctc
    10681 ccgcatgaac tcaaacccta tatcctgacc aaagggttcg tcggcttgga cggttgcagc
    10741 ctgaccatag gcaaagtcga agacggccgt ttcaatgtcc atctgattcc cgaaactttg
    10801 gaacggacgc tgttcggcag cagaaaggtc ggcgacagga tcaacatcga aatcgatccg
    10861 aatacgcagg caatcgtcga caccgtcgaa cggctgatgg cgcaaagata tgcaaagtga
    10921 ggtagagatg gaattgaacg aatttttcga taaagcctat gccgttttgc ggcgtttgga
    10981 tgccgtgctt ccgcccgaac ccgggcatac ggattggaac gcgcttgcct tccgctggca
    11041 gagtgcgggc aaaaaaggtt ttttggaaca cttgcccgat ccgcacacct ttcccttggt
    11101 aaggctggcg ggagtcggca ggcaaaccga attgctggtg cgtaataccg aacagttcat
    11161 tgtcggcaga cccgcgaaca atgtattgat gagcggcgcg cgcggaacag gcaaatcctc
    11221 gctggtcaaa gccctgctac acgaatatgc ggataaggga ttgcgcctga tcgaagtcga
    11281 taaaagcgat ttaatcggcc tgccttacct gttgacgctt ttgaaggaac gtccggaaaa
    11341 atttatcgta ttttgcgacg atttgtcgtt tgaaagcggc gatgaaacct ataaggcatt
    11401 gaaaaccgcg ttagacggcg gtctgtctca acgttgcgcc aacgttttgg tttacgcgac
    11461 ttccaacaga cggcacctga tgcccgaata ttttgacgag aatgccggta cgacggggat
    11521 gcggggggaa atccatcaga aagaagcggt ggaagaaaaa atatccctgt ccgaccgatt
    11581 cggattgtgg ctcagttttt atccgttcga tcaaaacgat tatctggcgg cggtgcaaaa
    11641 ttggctggaa gatttcggcg tgccgtatga tgaaaccgca cagatggcgg cattgcagtg
    11701 ggcgcagacg cggggcagcc gttcgggacg ttccgcgtgg cagtttgcct gcgactgggc
    11761 gggcaggctg ccgaaacaac gggcgttgtg agcgtttcgg ggattatttg aggcaggaag
    11821 aaagccacat ttgctgctgt tgcggtgtga ggatatggaa gaagcggtgt tggatttcca
    11881 attcgtccac cgcaaaatcc ataccggaca aatagcggct ttcgacataa tcgcgcgcct
    11941 cgttccgatt aaaaacatcc gaagaaatga tttcgacgac agaccggcgg cggctgtgtt
    12001 cggaatgcat aaccttcaaa cgcgccctgt cgcccgccat tttgaaggcg gtgcggattt
    12061 tacgcagctc attgtgctga ctttgggtca gcccgagtcg gcgtatgtcg cagttcggtt
    12121 gaaaatcgtt cggggggata taagccgtgg cggcgtggga aagctgacag gaaagcaaag
    12181 ccatacttaa aaaagaggcg gcaggtttgg caaaacggca gggagcaggc agtggcacgg
    12241 cttttcctct tgttggaaat tttaggaaat atactagatt gacgtgtgaa agatggtatt
    12301 atcgcggtta acttttgtta ataatgcgta cgtatgtccg gcaggcagac ataacggcgg
    12361 aatcggaa
//
LOCUS       DBBZXW010000053        12354 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.053, whole genome shotgun sequence.
ACCESSION   DBBZXW010000053 DBBZXW010000000
VERSION     DBBZXW010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12354
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.053"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(170..1099)
                     /locus_tag="ACJJD2_001314"
     CDS             complement(170..1099)
                     /locus_tag="ACJJD2_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7579847.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGAPLFERKSTPLRFTPVGERLLRLAHDLLPQVTDAERDLARIIEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1230..1979
                     /locus_tag="ACJJD2_001315"
     CDS             1230..1979
                     /locus_tag="ACJJD2_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HGG7579848.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            2102..2683
                     /gene="petA"
                     /locus_tag="ACJJD2_001316"
     CDS             2102..2683
                     /gene="petA"
                     /locus_tag="ACJJD2_001316"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HGG7579849.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2702..4051
                     /locus_tag="ACJJD2_001317"
     CDS             2702..4051
                     /locus_tag="ACJJD2_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HGG7579850.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            4066..4854
                     /locus_tag="ACJJD2_001318"
     CDS             4066..4854
                     /locus_tag="ACJJD2_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HGG7579851.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5193..6977
                     /gene="rmuC"
                     /locus_tag="ACJJD2_001319"
     CDS             5193..6977
                     /gene="rmuC"
                     /locus_tag="ACJJD2_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HGG7579852.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQEQKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAHLQEKEAEAERLRQSHIDLQEKAQGLAVENERLTTQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVRQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAAAVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTERANETTALSESLEYAAEDEAV"
     gene            complement(7184..7816)
                     /locus_tag="ACJJD2_001320"
     CDS             complement(7184..7816)
                     /locus_tag="ACJJD2_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HGG7579853.1"
                     /translation="MTLRYEILSVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNHWLEEGETLKVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7907..8731
                     /locus_tag="ACJJD2_001321"
     CDS             7907..8731
                     /locus_tag="ACJJD2_001321"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HGG7579854.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKDQEIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQTKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            8800..9363
                     /locus_tag="ACJJD2_001322"
     CDS             8800..9363
                     /locus_tag="ACJJD2_001322"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HGG7579855.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9445..9882
                     /locus_tag="ACJJD2_001323"
     CDS             9445..9882
                     /locus_tag="ACJJD2_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HGG7579856.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            9951..10220
                     /locus_tag="ACJJD2_001324"
     CDS             9951..10220
                     /locus_tag="ACJJD2_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HGG7579857.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            10220..11995
                     /gene="ptsP"
                     /locus_tag="ACJJD2_001325"
     CDS             10220..11995
                     /gene="ptsP"
                     /locus_tag="ACJJD2_001325"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HGG7579858.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLESDIAKVIRCEDE
                     EKSEKLIKQMNSVSVEEEADFKGRK"
     gene            12154..>12354
                     /locus_tag="ACJJD2_001326"
     CDS             12154..>12354
                     /locus_tag="ACJJD2_001326"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579859.1"
                     /translation="MSAQKLVGKNGFFRFYVLDSRFCGNDGRVVSVAPDKCRHLKSRH
                     SLKTENRNQKPKIRHSRAGGNLG"
BASE COUNT         3029 a         3094 c         3451 g         2780 t
ORIGIN      
        1 ttgggcaaaa atcaaaaaca gtatagtgga ttaacaaaaa tcaggacaag gcgacgaagc
       61 cgcagacagt acaaatagta cggcaaggcg aggcaacgct gtactggttt ttgttaatcc
      121 actatacatg aaaaaataga aaaactgccg ggtatggttg aataaggggt cagaccggtt
      181 ccaattcgct cagtccgggc aaatctgcaa aaccgcgttc gcgtatgatt tggcaaaaat
      241 tgttcagata gctcttgtcc gtatcttcgg tacggatggc ggcatacagt ttgctttgca
      301 atccgtcggc agtaatttgg cggtggacga catagccttt ttcaaggtag ggcatgactg
      361 tccaataggg aagggcggca atgccacgtc tgctggcaac cagttggata atggcgatgg
      421 tcagttcgct gtgtcggcgc ggcgggttga tgtttttcgg aatcaggatt tttttgggca
      481 aatccagcat ctcgtcggga acgggataag taatcagggt ttccccgata aagtcttccg
      541 ccgtccaaac gtttttggcg gcaagcggat ggtctggtgc gcaaatgccg accatttcgt
      601 aggcaaacag cggttggaaa gaaatatcgt tttgtttttc cgcttcggaa acaatggcaa
      661 ggtcggcacg gtgttgcagc agcagtccga cgggatccgc ttggaatccc gatacgatat
      721 ccaattcgac ttggggccac atcgggcgga attcgcccat ggcgggcatc agccagtcga
      781 aacaggtatg gcattcgacg gcaatccgca attctcctgc ctctccttct ataatgcgtg
      841 ccaaatcacg ttctgcatcg gtaacttgag gcaacaggtc gtgagcgagg cgtaacagcc
      901 tttctccaac cggggtaaag cgcaagggcg tggattttcg ttcgaacaac ggtgcgccgt
      961 agtggttttc aagcatacgg atttggtggg aaagtgcaga ttgggtaagg aaaacccgtt
     1021 tggcggcaag ggagacgctg ccggtttctt caagtgccag cagggtcttg aggtggcgca
     1081 gttcgatgat ggaatccatg aggtttcaga cggcatattg aaccggcgca tattaaaata
     1141 attcatatgc gggtgcaaat cggaaaaatg tgaattccag acattttgcg attagaatgc
     1201 ccgcttgttt aaagcgatta ggaaaaaaga tggtattgcg cagggatttt ctgacttggt
     1261 gtaatgaaac attgcagaca gcgttgttta aagattacgc ccctaacggt ttgcaggttg
     1321 aagggaggga atatatcggg aaaatcgtta cgtcggtaac ggcaagcagg gcagcgattg
     1381 attttgctgt ggagcagaag gcagatttgc ttttggtaca tcacggtatg ttctggaaaa
     1441 acgagttgcc gaccgttact ggttggaaaa aagaacggat tgccgcactg ttacggcacg
     1501 acatcaatat ggcaggctac catctgcccc tggatgcaca tcccacactg ggcaacaatg
     1561 cccaactcgc cgacagattg ggttttgcga cagaaaaacg gttcggcgaa caaaacctgc
     1621 tcaactcggg cagcctgaaa caagccaaga cactcggcgc attggcggcg catattgaaa
     1681 cagttttgca acgtaagcct gtcgtcatcg gcaaacccga acgcgaaatc cgacgggttg
     1741 catggtgcag cggcggggcg caggggtttt ttcagacggc aatagacgaa ggtgtcgatc
     1801 tgtatttgac gggggaaatc tctgaagctc aataccacct tgccaatgaa acgggtacgg
     1861 ctttcatttc ggcagggcat cacgcgacgg aacgttacgg cgtacgcgcg ctggcagaat
     1921 cggcggcaga ggttttcggg ttggaagtgt gccattttga cgaaaacaat ccggcttgag
     1981 tcttgagaaa tatcataaaa ctttacctta ttttaaataa tgctttgagt atcactgcaa
     2041 actgggtaaa attgcaacgt ttaatggctc ggtattccca aaatattagg acgactgaat
     2101 aatggataat caagaaatca acaacggccg ccgccgtttc ctgacactcg cgacctgcgg
     2161 cgcgggcgga gtggcagcat tgggtgtggc aacgccgttt gtggccagtt ttttcccttc
     2221 ggaaaaagcc aaggccgccg gtgctgccgt cgaggtggat gtcagtaaaa tcgaagcggg
     2281 tcagctgctg accgccgagt ggcaaggcaa accgatttgg gtgctcaacc gtacagatca
     2341 gcagcttaaa gacctgaaag gcctgaacgg cgaacttacc gatcccaatt ccgatgcgga
     2401 acagcagccg gagtatgcta aaaacgagac ccgttcgatt aagccgaaca tccttgtcgc
     2461 catcggtatc tgcacccatt tgggctgctc gcccaccttc cgtcccgaca ttgcccccgc
     2521 cgatttgggt gcagactgga aaggcggctt cttctgcccc tgccacggtt cgaaattcga
     2581 cttggccggc cgcgtatata aaggtgttcc tgccccgacc aacctggttg tcccgccata
     2641 taaatacttg agcgacacaa ctatcttggt gggcgaagac taagaataag gaacgataat
     2701 tatggcaaac caaaccaata gcaaagcaaa agcattgtta ggctggatgg acgctcgttt
     2761 ccccctgtct aaaatgtgga atgagcattt ggctcaatac tacgcaccga aaaactttaa
     2821 tttttggtac tacttcggct ctttggccct gcttgtcctc gtgattcaaa tcgtcagcgg
     2881 cattttcctg accatgaact acaaacccga cggcaacctg aacgcctacc atctgcctgc
     2941 tgcctttact gcagtcgagt acatcatgcg cgacgtgtcc ggcggttgga ttatccgcta
     3001 catgcattcc accggcgcat ctttcttctt cattgttgtt tatctgcaca tgttccgtgg
     3061 tttgatttac ggttcgtaca aaaaaccccg tgagttggtg tggattttcg gttctctgat
     3121 tttcttggca ttgatggcgg aagcctttat gggctacctg ctgccttggg gtcagatgtc
     3181 cttttggggg gcgcaggtaa ttattaacct gttctccgcc atccctgtta tcggtccgga
     3241 tttgtccact tggattcgcg gcgacttcaa cgtttccgac gttaccctga accgtttctt
     3301 tgccctgcac gttatcgcgg tacctctggt attgctcggc ttggttgtgg cgcacatcat
     3361 cgccctgcac gaagtgggtt ctaacaaccc tgacggcgtt gaaatcaaga aaaacaaaga
     3421 cgaaaacggt atcccgcgcg acggtatccc attccatcct tactataccg ttaaagacat
     3481 cttgggtgtg gttgtattcc tgattgtctt ctgtgccgta ttgttcttcg caccggaagg
     3541 cggcggctac ttcctcgaag cgccgaactt cgatgcggca aatgcgctga aaacaccccc
     3601 gcacattgcg ccggtatggt atttcacacc gttctacgcc attttgcgtg cgattccctc
     3661 gttcttggga acgcaggttt ggggtgtaat cggtatgggc gcggcggtcg tgttgattgc
     3721 cctgctgcct tggctggata ggggcgaggt gaaatccgtc cgttaccgcg gcccgatttt
     3781 caaaaccgca ttggtcttgt tcatcatttc ctttatcggt ttgggtattt tgggcgcgat
     3841 ggtggcaacc gatacgcgta ctttggtcgc gcgcatcctg tccttcgtct atttcgcatt
     3901 cttcctgggt atgccgttct ataccaagct ggataaaaac aaaccggttc ccgaacgcgt
     3961 aaccatgagc accgccaaac aaaaaatcat gttctttgtt tacgtcggca ttaccgccgt
     4021 gggtgcttac ctgtttgcaa ccaacatctg atgagggcag tcaaaatgaa acaagctatg
     4081 aaaaattggt ttgctgcctt gctgttggca gtacccatgg gtgcggcatt tgcttcgggc
     4141 ggtcatgcac actatgagaa agtcgatatc gatttgcgcg accaagtcag cctgcagcgc
     4201 ggcgcacaaa tctttaccaa ctattgcctg tcctgccact cggcaagcgg tatgcgtttc
     4261 aaccgtttga aagacatcgg tttgactgac gaagaaatca agaaaaacct gatgtttacc
     4321 accgataatg tcggcgatgt catgcattcg gcgatgaacc cgaaagatgc ggcaaaatgg
     4381 tttggtgctg ctccgcccga tttgacattg attgcgcgtt ccaaaggtgc agactacctt
     4441 tacgcttata tgcgcggctt ctataaagat ccgacccgtc cgagcggctg gaacaatact
     4501 gtattcgata aagtcggtat gccccacccg ttgtgggaac agcaaggcgt tcaagccgtt
     4561 gagttggatg ccaaaggtca gccggttatg gtaaaagacg aacacggcga gatgaagcct
     4621 aagctgtatt gggaatctac cggtttgcac agccgccgtc tgcctaacgg caaagtgatc
     4681 caaaaagagt acgacgcata tgtacgcgat ttggtcaatt accttgtgta catgggcgaa
     4741 cctgcacaac tgcaacgcaa acgtataggc tatgtcgtga tgattttcct atttgcggtt
     4801 atgctgcctt tggcgtattt cctgaaaaaa gaatattgga aagacgtaca ctaagcgttt
     4861 ggaacaaaag ggcaaatcct ttagggtttg cccttttttc attttgcctg ccgtttgaaa
     4921 agcctgaatc cgtatgccgt ctgaacatag ctgcaacatt tcagacggca tcattctaaa
     4981 aatgtcagac atcgggaact taatcagggt ttgtggcaga ttgatattga attaggaaaa
     5041 ggtctgaaac cgcaagcagc atggtaaggc gatgtcgaac aggtttaaag ccaatccgct
     5101 atattttttg gagctatgtc gaacaaacag gtagaatcgg aataagcggc ggttttgtcc
     5161 ggtgtgaaaa tgtttgaata ttaggatgat tgatggaact gatgactgtt ttgctgcctt
     5221 tggcggcgtt ggtgtcgggc gtgttgttta catggttgct gatgaagggc aggtttcagg
     5281 gcgagtttgc cgatttgaac gcgcaactgg cggaaaaggc ggcaagatgt gattttgtcg
     5341 aacaggcaca cgcagaaatt gcatcggaat tggccgtttt ggacgggaaa taccgacatt
     5401 tgcaggacga aaattatgct ttgggcaacc gtttttccgc agccgaaaag cagattgccc
     5461 atttgcagga aaaagaggcg gaatcggttc ggctgaagca gtcgtatatc gagttgcagg
     5521 aaaaggcgca gggtttggcg gttgaaaacg aacgtttggc aacccagctc ggacaggagc
     5581 agaaggcgtt tgccgatcaa tatgccttgg aacgccaaat ccgccaaaga atcgaaaccg
     5641 atttggaaga aagccgccaa actgtccgcg acgtgcaaaa cgacctttcc gatgtcggca
     5701 accgttttgc cgcagccgaa aaacagattg cccatttgca ggaaaaagag gcggaagcgg
     5761 agcgtttgag gcagtcgcat atcgatttgc aggaaaaggc acagggtttg gcggttgaaa
     5821 acgaacgttt gacaacgcaa atcgaacagg aacgccttgc ttctgaagag aaactgtcct
     5881 tactgggcga ggcgcgcaag agtttgagcg atcagtttca aaatcttgcc aacacgattt
     5941 tggaagaaaa aagccgccgt tttaccgagc agaaccgcga gcagcttcat caggttttga
     6001 acccgttaaa cgaacgcatc cacggtttcg gcgagttggt caggcaaacc tatgataaag
     6061 aatcgcgcga gcggctgact ttggaaaacg aattgaaacg gcttcaaggg ttgaacgcgc
     6121 agcttcacag cgaggcaaag gctttaacca acgcgctgac cggtacgcag aataaggttc
     6181 agggaaattg gggcgagatg attctggaaa cggttttgga aaattccggc cttcagaaag
     6241 ggcgcgaata tgtggtgcag gcggcggctg tccgcaaaga agaagacggc ggcacgcgcc
     6301 gccttcagcc cgacgttttg gttaacctgc ccgacaacaa gcagattgtg attgattcca
     6361 aggtttcgct gacggcttat gtgcgctata cgcaagcggc ggatgcggat acggcggcgc
     6421 gcgaactggc ggcacacgtt gccagcatac gcgcgcatat gaaaggcttg tcgctgaagg
     6481 attacaccga tttggaaggt gtgaacacat tggatttcgt ctttatgttt atccctgtcg
     6541 aaccggccta cctgctggcg ttgcagaatg acgcgggatt gttccaagag tgtttcgaca
     6601 aacggattat gctggtcggc ccgagtacct tgttggcaac cttgcggacg gtggcgaata
     6661 tttggcgcaa cgaacagcaa aatcaaaacg cgctggcgat tgcggacgaa ggcggcaagc
     6721 tgtatgacaa gtttgtcggt ttcgtacaga cgctcgaaag cgtcggcaaa ggcatcgatc
     6781 aggcgcaaaa cagctttcag acggcattca agcaacttgc cgaagggcgc gggaatctgg
     6841 tcggccgcgc cgagaaactg cgtctgttgg gtgtgaaggc aaacaagcag cttgcacgcg
     6901 atttgaccga acgtgccaat gaaacaacgg cgttgtcgga atctttggaa tatgcggcag
     6961 aagatgaagc agtctgactt gtgcggaaaa atattgtttc agcaggggcg ggaatgccga
     7021 aagcgcggcg taactgtacc ggttctgatt tggggtttgt ttgaagtact taccaaagcc
     7081 ttgtccggcg aggtacaccg gcaaggcggc ggttgtctga gccttttgcg tttcagacgg
     7141 catcagtgca gatgacgccg tctgaagacc gtagtgaagt cggttagaaa aacggattgt
     7201 gccgtttttc gtgtccgatg gaagtcatac gcccgtgtcc ggcgacaact tgcacggttt
     7261 cggggagggc gaataatttg ttgcggatat tattgattaa gtcggcgtgg ttgccgcgcg
     7321 gaaaatcggt tctgcctatg gtttcgtaaa acagcacgtc gcccgcaatc agcagctccg
     7381 cttcggcaca atagaaaacc acgtgtcccg gcgtgtgccc cggaatatgc agcacttgga
     7441 aggcgtagcg tccgactttg agcgtttcgc cttcttcgag ccaatggttc ggcgcaaagg
     7501 cgggcgagac ggggaatccg tattgcgcgg tggtttgcgg cagcgattgg agcaggaatt
     7561 catcgtccgg atgcggcccg aggacaggga ctttatgcgt tttcaacatt tcgaccacgc
     7621 cgcccgcgtg atcgagatgg ccgtgcgtca gccagattgc cgtgagcgta agtttgcggt
     7681 ttgccaacgc ttgcagcagg aacggcacgt cgccgccgac atcggtcagg acggcttcgc
     7741 cgctttcgtc gtcccaaatc agggtgcagt tttggcggaa gggggtaacg gagaggattt
     7801 cgtaacgtag ggtcatggcg tgttcctaaa cggtttttca gacggcatcg ggtttgccgt
     7861 ttgttttatg gcggtttgcc gcctgtttgg atattggggg aatcagatga ttaagaagac
     7921 aatcggcggc atcataccga tttttacggc ggttttcatc cctgcatcag caggcgcggc
     7981 ggatttgatg ctggcgcagg aatacaaaga ccaagagatt gcaggctggg caatgagcga
     8041 gaaactcgac ggcgtgcgcg cctattggga cggaaagcac ctgataagcc gtcagggcta
     8101 cgcgtttacg ccccccaaag gctttaccgc gcagtttccg ccttatcctt tggacggcga
     8161 attgtatagc ggacgcggtc agttcgagca gatttccgct accgtgcgtt ctgtttcttc
     8221 agactggcgc ggcatccgcc tgcacgtttt cgatgtaccc aaggcgcagg gcaatctcta
     8281 ccaacgtttg gcagtcgcaa cgcagtggct gaaaacgcat ccgaacgcgc cgattaccat
     8341 catcccgcaa accaaagtgc gcgaccggca gcacgcgatg gactttttaa aacaaatcga
     8401 agcgcagggc ggcgaaggcg tgatgctgcg tcagcccgaa tcccgttata gcggcggcag
     8461 gagcagccaa ttattgaagc tgaaaagcca atacgacgac gaatgcacgg taacacggca
     8521 ctatgagggc aaagggcgaa acgccggacg gctgggcgcg gtcggctgca aaaaccgaca
     8581 cggcgaattc cgcatcggca gcggtttcaa agacaaagac cgcgacaacc cgcccaaaat
     8641 cggcacactg attacctacc gctaccgtgg ttttacgcgg aaaggcacgc cgaaatttgc
     8701 cacatttgtg cgcgtgcgta ccgaccgctg agcaggacgg ttcagacggc agccgatact
     8761 ttggtttata attttccttt taccgaccga ttccgacata tgaccgattt agaaaccaaa
     8821 cgccttgaaa cacaggcgat gcttgaaaac gccgatcttt tgttcgacca aggccaatgc
     8881 cgtgccgcac tgcaaaaagt ggcggacgag attacgcgcg atttgggcgg caaatatccg
     8941 ctgctgctgc ccgtgatggg cggcgcggtg gtgtttacgg ggcagttgct gccgctgttg
     9001 cgttttccct tagattttga ttatgttcac gtttcccgtt acggcgacaa gctggagggc
     9061 ggcgcgttca actggaagcg tatgcccgat gcggaacaaa tccggggcag gcacgtcgtc
     9121 gtgctggacg atattttgga cgaagggcat acgatgtccg ccattcaagc caaacttttg
     9181 gaaatgggtg cggcaagctg ccgtgcggcg gtgttcgcca acaagctgat cgacaaaccc
     9241 aagcctatcc gagccgatta tgtcggactg gatgtgccga accgttatgt tttcggttac
     9301 ggcatggatg cggcgggctg ctggcgcaat ctgggcgaga tttacgcatt ggacggaaaa
     9361 taaggaagcg atgccgtctg aaggcctttc agacggcatc gcgcccatac gccggtagga
     9421 taatgaagaa caggacgcat caatatgata gggcttttaa tcatcacaca cgaaaccata
     9481 ggcgaagcct accgcaagct ggcacatcat tttttcccgg gcgggctgcc tgaaaacgtc
     9541 cgcatactcg gcgtgcagcc gacggaagac caagacgaca tcatcaacaa cgccattgcc
     9601 gcgcttcagg agtttcccga caacgacggc gtgctgatta tgaccgatat tttcggcgcg
     9661 accccctgca atgccgcccg ccgcctcgtg cgcgaaaaca aatcggcgat tttgaccggg
     9721 ctgaacgcgc cgatgatggt taaggccgtc caatattcgc cggcggcgga agaccttgcc
     9781 gcctttaccg aatgcgtcag ggaggcggcg gtaaaaggca ttttcgccat cacgtccgcg
     9841 cccgaagatt tggtgtgccg gcgcagcggc gatgccgtct gaagaagcgg cagggcagga
     9901 aaacatttta aacggcgtct gctgccgata tacataacac gggaatcgaa atgctcaaac
     9961 aatccatcga aatcatcaac aaactcggac tccacgcccg cgcgtccaac aagttcaccc
    10021 aaaccgcgtc ccaattcaaa agcgaagtct gggttacgaa aaacgacagc cgcgtcaacg
    10081 gcaaaagcat tatggggctg atgatgctcg ccgccgccaa gggtacggtc atcgaactgg
    10141 agacggacgg cgcggacgag gcggaagcga tgcgcgccct gaccgactta atcaacggct
    10201 acttcggcga gggcgaataa tgagtatcgt gctgcacggc gtggcggcgg gcaaaggcat
    10261 tgccgtcggt tgcgcccacc tgattgcgcg cggtacggag gaagtgccgc agtatgatgt
    10321 tgcggaggcg gacaccgatg ccgaagccga acgtttcgat gccgccgtca aagccacgcg
    10381 caaagagttg gaacagctcc gcagcgcaat tcccgaaaac gccccgaccg agttgggcgc
    10441 gttcatctcg ctgcacctga tgctcttgac cgatgttacc ttgtcgcgcg aacccgtcga
    10501 tattttaagg gaacaaaaaa tcaacgccga gtgggcattg aagcagcaga gcgacaaact
    10561 cgccgcccaa ttcgacaata tggacgatgc ctatttgcgc gaacgcaagc aggatatgct
    10621 gcaagtcgtc cgccgcatcc acaacaacct gatcgggcag ggcaacgagt tggaagttgc
    10681 cgacaacctg tttgacgaaa ccgttctgat tgcaaacgac ctttcgcccg ccgacacggt
    10741 tttgtttaaa gagcagcgca ttgccgcctt cgttaccgat gccggcggcc ccaccgggca
    10801 tacggcgatt ttgggcagga gcttggacat cccgtccgtc gtcgggctgc acaacgcgcg
    10861 caaactgatt accgaaggcg aaacggtcat tgtggacggt atcaacggcg tgttgattat
    10921 cgcgccggat gagtcggtgt tgaacgaata ccgccgccgt gcccgcgaat accgcagcca
    10981 caaacgcgat ttgaacaagc tcaaaaaaac cgccgccgcc accgccgacg gggtctgcat
    11041 cgagcttgtg ggcaatatag aatccgccga agacgtgaaa ccgctgcaca acctcggcgc
    11101 agacggcatc gggctgttcc gcagcgagtt tctttacctg aaccgcgata cgatgccgtc
    11161 tgaagacgag cagtacgaag tgtacagcgc gattgtcaaa aaaatgaaag gcaaaagcgt
    11221 aacgatacgg acagtcgatt tgggtgtgga caaaaacccg cgctggttcg ggaaaaacag
    11281 cacgcccaac ggcagcctca accccgcgct gggcatgacc ggcatccgcc tgtgccttgc
    11341 cgaaccggtc atgttccgca cccagatgcg cgccatcctc cgtgcggcgg tacacggccc
    11401 cgtgcggatg atgtggccga tgattacctc cgtatccgaa gtgcgccagt gcctcatcca
    11461 cctcgacacc gcgcaacgcc agcttgccga acgcggcgat gccttcggta aagtcggcat
    11521 cggctgtatg attgaaattc cgtctgccgc gctgaccgtc ggcagtattt tgaaactggt
    11581 cgatttcatc tccgtcggta ccaacgacct gattcaatac atcttgtccg tcgatcgcgg
    11641 cgacgacagc gtcagccacc tctaccagcc cggccatccc gccgtgctga aaatgctgca
    11701 acacgtcatc cgtaccgcca accgcatgga caaagacgta tccgtatgcg gcgagatggc
    11761 gggcgatacc gcgtttaccc gcgttttatt gggtatgggg ctgcgccgtt tttccatgaa
    11821 ccccaacaac atcctgcccg tcaaaaacat cattctgcac agcaatgtcg gacagctcga
    11881 aagcgatatt gcgaaagtca tccgctgcga agacgaagag aagtcggaaa agctgatcaa
    11941 acagatgaac agcgtgtctg tcgaggaaga agccgacttc aaggggcgga aataaatacg
    12001 gcaggtaaaa aatagaaata cttaacaatg cccgcaatct gaaattttgc cattcttgca
    12061 aaatagaaaa ccgaaacaga aacccaaaat cggtcattcc ctcaaaatca gaaacctaaa
    12121 atccgtcatt cccgcgcagg cgggaatcta ggtttgtcgg cacagaaact tgtcgggaaa
    12181 aacggtttct ttagatttta cgttctagat tcccgctttt gcgggaatga cggcagggtg
    12241 gtttctgttg ctcccgataa atgccgccat ctcaagtctc gtcattccct taaaacagaa
    12301 aaccgaaatc agaaacctaa aatccgtcat tcccgcgcag gcgggaatct aggt
//
LOCUS       DBBZXW010000054        12308 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.054, whole genome shotgun sequence.
ACCESSION   DBBZXW010000054 DBBZXW010000000
VERSION     DBBZXW010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12308
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.054"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..1307)
                     /gene="pilC"
                     /locus_tag="ACJJD2_001327"
     CDS             complement(<1..1307)
                     /gene="pilC"
                     /locus_tag="ACJJD2_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7579860.1"
                     /translation="MNKTLKRRVFRHTALYAAILMFSHTGGGGAQAQTRQYAIIMNEG
                     NQPEVQWNGSYSIKDKDRKREYTHHNHSRGGSSVSFNNSDELVSQQSGTAVFGTATYL
                     PPYGKVSGFDADGLNKRGNAAGWIRTTRIALAGYSYEGVVCRSGTGCPKLVYKTRFSF
                     DNPDLVKNAGRLDRHTDPSRENSPIYKLKDYPWLGVSFNLGAEGTTKDGKTINKLVSS
                     FDEKNSSNNNLVYTTEGRDISLGDWQREKTAMAYYLNAKLHLLDKKGIKDITNKTVQL
                     GVLRPSIDVRLQRNTGLAGLLNFWASWDIKDNGQIPVKLGLPEVKAGRCINKANPNPK
                     AQALSPALTAPALWFGAGQDGKAEMYSASVSTYPDSSSSRIFLQNLKRKNDPNKPGRY
                     SLADLSASDIQSKEPSFTSRQTIIRLDGGVHEIKLDRSNEATG"
     gene            complement(2564..3643)
                     /gene="apbC"
                     /locus_tag="ACJJD2_001328"
     CDS             complement(2564..3643)
                     /gene="apbC"
                     /locus_tag="ACJJD2_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HGG7579861.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIAAAVADSVQEILMPETGGAHIHLSIDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
     gene            3854..3929
                     /locus_tag="ACJJD2_001329"
     tRNA            3854..3929
                     /locus_tag="ACJJD2_001329"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3887..3889,aa:Lys,seq:ttt)
     gene            4008..4517
                     /locus_tag="ACJJD2_001330"
     CDS             4008..4517
                     /locus_tag="ACJJD2_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HGG7579862.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWVRKPEEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            4860..5300
                     /gene="nadR"
                     /locus_tag="ACJJD2_001331"
     CDS             4860..5300
                     /gene="nadR"
                     /locus_tag="ACJJD2_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HGG7579863.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            5415..5915
                     /gene="hpaC"
                     /locus_tag="ACJJD2_001332"
     CDS             5415..5915
                     /gene="hpaC"
                     /locus_tag="ACJJD2_001332"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HGG7579864.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVTP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            5931..6626
                     /gene="murU"
                     /locus_tag="ACJJD2_001333"
     CDS             5931..6626
                     /gene="murU"
                     /locus_tag="ACJJD2_001333"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HGG7579865.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEEALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHHPDGDFLLLPDGSVQSEVS
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(6871..7302)
                     /locus_tag="ACJJD2_001334"
     CDS             complement(6871..7302)
                     /locus_tag="ACJJD2_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HGG7579866.1"
                     /translation="MSSNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVI
                     LAALLLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            7477..9153
                     /locus_tag="ACJJD2_001335"
     CDS             7477..9153
                     /locus_tag="ACJJD2_001335"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HGG7579867.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            9267..10358
                     /gene="ychF"
                     /locus_tag="ACJJD2_001336"
     CDS             9267..10358
                     /gene="ychF"
                     /locus_tag="ACJJD2_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HGG7579868.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LERLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYEDFIALGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            10396..10725
                     /locus_tag="ACJJD2_001337"
     CDS             10396..10725
                     /locus_tag="ACJJD2_001337"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579869.1"
                     /translation="MPSEAGFGGFRRFHTAGMRLHQNKIPSAFPICPPRFLQNKPPAP
                     LLQKAVRHSEYPEPRYKMTFQTAFAPPRFEYSGLTLNQDKATKPQTVQIVRQGEATPY
                     WFKFNPL"
     gene            10733..12080
                     /locus_tag="ACJJD2_001338"
                     /pseudo
     CDS             10733..12080
                     /locus_tag="ACJJD2_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
     gene            12145..>12308
                     /locus_tag="ACJJD2_001339"
     CDS             12145..>12308
                     /locus_tag="ACJJD2_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7579870.1"
                     /translation="MSTFFQQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPA"
BASE COUNT         2706 a         3240 c         3416 g         2946 t
ORIGIN      
        1 aaaccggtgg cctcattgct tctatccagt ttgatctcat gtacaccgcc atccaatcgg
       61 atgattgttt gccgacttgt gaaactcggc tctttacttt gaatatccga cgcactcaag
      121 tctgcgaggg aatagcggcc gggtttgttg gggtcgtttt ttcttttcag attttgaagg
      181 aagatgcggc tgctcgaact gtcggggtag gtggaaaccg aagcggaata catctccgcc
      241 ttaccatctt gcccagctcc gaaccacagc gcgggggcgg tcaaggcggg ggaaagggct
      301 tgggctttgg gattggggtt cgctttgttg atgcagcggc ctgctttgac ttccggcagg
      361 ccgagcttga ccggaatctg cccgttatct ttaatgtccc aactagccca aaaatttagc
      421 aagccggcaa gccccgtatt tctttgcagc cgcacatcga tgctcggcct caagacaccc
      481 aactgcactg ttttgttggt gatatcttta atcccttttt tgtccagcag gtgcagtttg
      541 gcgttcagat aataggccat ggcggtcttt tcgcgctgcc agtcgcccaa ggaaatatcg
      601 cggccttccg tggtatagac gaggttgtta ttactactat tcttttcatc aaaagaagat
      661 accaatttgt tgattgtctt accatctttg gtggtaccct cggcacccaa attgaaagat
      721 acgcccaacc atggataatc cttcaatttg taaatgggcg aattttcgcg gcttgggtct
      781 gtgtgcctat ccagcctgcc cgcatttttt accaagtcgg gattatcgaa ggaaaatcgg
      841 gttttataga caagtttggg acagcctgtg ccgcttctgc atacgacacc ttcgtagctg
      901 tagcctgcca gcgcgatgcg ggtggtacga atccaaccgg cggcattgcc gcgcttgttc
      961 agcccgtcgg catcaaaacc ggaaaccttg ccgtagggcg gcaggtaggt ggctgtgcca
     1021 aaaacggcag taccgctttg ttgagaaaca agctcatcgc tattgttgaa tgagacagag
     1081 cttcctcctc gtgagtgatt atgatgagta tattcgcgct tcctgtcttt gtcctttatt
     1141 gaatatgacc cattccactg tacctcgggc tggtttccct cgttcatgat aatagcgtat
     1201 tgacgggttt gcgcctgcgc cccccccccg ccggtatggg aaaacatcaa gatggcggca
     1261 taaagcgcgg tatggcggaa aacccgcctt tttaaagttt tattcatcgt atttcctttt
     1321 cggtcaaacc ccccgccctt cgggcatccg tccttcgggg cggcaggatc aggctttgtc
     1381 cgggaggggt gcaagccctt ccgaatcagg gcggcgcctt atgtgccgcc ctgtgtgttg
     1441 gaacatattt tatcccttaa atcttgcttc gcgggatacc gtcggcggca ggcgcgccgc
     1501 aaacggcggg attcggcaaa ccgcccgatt ccgcgcccgc cgaattgctg gttggaaaac
     1561 ccctttggcc cggctgccaa agggggatgt tcggaaaagt aacacgcccc tttggccgga
     1621 tgcaatgtat agggttaccg cattattcta cccttgcgcg ctgatcatgg taaagcggtt
     1681 ttcggcaatc cgcaaccgcc tccttggccc gccattgccg cgaaagcggg aatccggaac
     1741 gtaaaatctc aaaaaaaccg ttttatccgg caagtttgcc cgccggcagg cccgccattg
     1801 ccgcctgcgc ggcaatggcg ggccggggag gcggcatttt ccaagttgcg gcaatctttc
     1861 ccaacaactc aaccgcccca atacaagcct ttcggcttgt tgccctctct ctagctctct
     1921 cccacaggga gagaggacgg gtcggctgtt ggggttgagg tttgctgcaa ggaaaacagg
     1981 ttgtgcaggc tgctttttat ttttcagacg acctgaaaca acagctgcaa atctaagttg
     2041 cctttcaaat cgcctgcaac cgaaaaatct gccgaaaccc actccctccc ccgtggggga
     2101 gggccgggga ggcggcattt tccaagttgc ggcaaccttt cccaacaact caaccgcccc
     2161 aatacaagcc tttcggcttg ttgccctctc tccagccctc tcccacgggg agagaggacg
     2221 gggaggctgt tggggttaag ggttttgtaa actaatcagg ttgtgcaggc tgctttttgc
     2281 ttttcagacg acctgcatca acggttgtaa atccaatctg tttttcaaac cgcctgcaac
     2341 cgcaaaacct gccgcaatcc gctccctccc ctgtggggga gggccgggga gagggcattc
     2401 tccaagttgc ggcaatcttt cccaacagct taaccgcccc aatacaagcc ttgcggcttg
     2461 ttgccctctc tccagccctc tcccacgggg agagaggact atgaagcccg ccggcaggcg
     2521 cggggcttgg gacggcattg ctgttgcggt ttcggacgcg gctttattcg acgacgattt
     2581 tagggaaccg gctgctgaag tctttgcctt tgtcggcaat gcccagggcg atttggaatg
     2641 cggcatcggt gtagattcgg gcgatggcgg ggtgttcgtc gaacagttgc gccggtgtgc
     2701 cgccgtccat ggcttcgcgc acgggcaggc ttaagggaag ctgtccgagc agggggacgt
     2761 tgaggcgtgc cgccaaatct ttgccgccgt ccgtgccgaa cagtgcttcg ctgtgtccgc
     2821 agttggagca gatgtggacg gacatatttt ccaatacacc taaaatggga atgttgactt
     2881 ttcggaacat atccacggct ttgcgcgcgt ctatcagggc gatgtcctgc ggcgtggtta
     2941 cgatgaccga tccggttacg gggatgcgtt gggacagcgt gagttggatg tcgcccgtgc
     3001 cggggggcag gtcgataaac aggtagtcca cttcgtccca ctcgctttga aacatcagtt
     3061 gctgcaaggc ttggctgacc atcggcccgc gccagacgac ggcttggtcg gtatcgacga
     3121 gaaagccgat agacatgacc tgtatgccgt ctgaagattc gacgggaatg agtttttggt
     3181 ttttctgatc gggtttgcgg tcgtccacac ccaacatggt cggttggctc gggccgtaaa
     3241 ggtcggcatc gagcacgccg acgcgcgcgc ccatccgcgc cattgcggcg gcaaggttgg
     3301 cggtggttgt tgatttgccc acgccgcctt tgccggaggc gacggcaatg atgtttttca
     3361 cacctttgat ggtggtaacg ccaggttgga ctttatgtgt gccgatttcg gtgtctatgg
     3421 acagatggat gtgcgcgccg cctgtttcgg gcatcaggat ttcttgtacg gaatcggcga
     3481 cggcggcggc gatgtgcgcg acagggaagc cgaaatgcag ggcgatatgg atgccgtctg
     3541 aacgctgttc gaccgaacgg acggcctttt cgccgccgag cgtgcgtgcc gtattcggaa
     3601 cggcgacggt gtcgaggagg gtgcggatgt tttgtatgtt cataatgtgt gtttctgtgt
     3661 gcagtttggg aaacgggcgg aaagtgtaca ttgatttcgg gcggtttgcc tttccttgtg
     3721 cgaactttta cacggtatgc ggcggattgt gaaaatccgt tgtcaaaata tcccgtgcaa
     3781 acagtggtct gcaattaagc ctgtaaaatt tgcttgacga ggcaggatgg tgctgtataa
     3841 tgcacggctt atcgggtcgt tagctcagtc ggtagagcag cggactttta atccgttggt
     3901 cgagcgttcg aatcgctcac gacccaccag ataaccggaa gccaagtttt gagacttggc
     3961 tttttgtttg cctgccggtt gcgcgggcgt accgtttgag agagcgtatg aaaaagaaac
     4021 tgctttcggg catcaaattt gccgttcaga cggcattggt gtttttattg gtgtcgctgt
     4081 ttttggattg ggtacgcaag cccgaagagc cggccggtgc ggcagggcgg cctttgaccc
     4141 tgctgtcggg gcagcggctg actttgggac agtttagccg ggataaggcg gttttggtgt
     4201 atttttgggg gagctggtgc ggcgtgtgcc gttatcagtc gccgataatc gatgatttgg
     4261 cggcggacgg cgtgccggtc gtcggcgtgg cggtacgttc cggcagcgcg tccgaagtgg
     4321 cggcgtatat ggcaaagcgg ggcttgggct ttccgactgt caacgatgag gacgggggtt
     4381 tggcaaggtc ttggcggatt gtcgcaacgc cagccgtcgt tttggtcaaa aatgggaaaa
     4441 tggttcacta tacgacggga atcagcagtt attggggctt gcgcgcacga atttttcagg
     4501 cggatgtttt cggttaactt ttgtttttgt taaactttac gctatgtaga gaatcaaacg
     4561 gcatatacct tgctcgtctg atgcggcggc ttttgttttt tctggaagaa agttctttcg
     4621 acagtaaatg taatactttg ttgagattgt agggaaaata gactaagata taactattaa
     4681 aatattttta gataggatta tcggaattaa agtcttttat acccagtcgt ccgatgcggt
     4741 ttatagcgta ttgttgctat atgttcgttt tgttatataa cggttgcatc aaaatttacg
     4801 cccacaggtt ttcccgacgg tttgaaagtt tgattttcga taacttggag acttgaacaa
     4861 tgcctaccca atcaaaacat gcgtctatca atatcagtct gatacaggca agggaagccc
     4921 tgatgaccca attcaggcct attctgaatc aggcgaatat taccgatcag caatggcgga
     4981 ttatccgtct tttggcggaa aacggcacgc tggactttca agatttggcg aatcaggcgt
     5041 gtattctgcg ccccagcctg accggtatcc tgacccgcct tgaaaaagcg ggtttggtcg
     5101 tccgcctgaa accttccaac gaccaacgcc gcgtttttct gaagctgact gccgagggcg
     5161 agaagctgta tgaggaaatc ggcgaagaag tggacgagcg ttacgacgct atcgaggaag
     5221 tgctgggccg cgagaaaatg ctgctgctta aagacctgtt ggcagaactt gccaaaatcg
     5281 aggatgcgtt gaactcgtaa tacgccgtaa cgcgcggaaa tgtccgaccg acggcttttt
     5341 gaatcagaac tgctgcacat ggggggtgcc ttgtgtgcag cattcttata taggggacag
     5401 tttaaagggg aaaaatggcg gatttgcaga aaacttttca aacttcgttc cgtgatgcga
     5461 tggcatcttg tgcggcaggc gttcatgtca tcacgacaga cggtgcggca gggcgttacg
     5521 gcattacaat gacggcggtt acaccggtaa cggacgagcc tccgaccgtg atgctgtgca
     5581 tcaaccggag tgcgcgaatc attccgatcc tgtcggaaaa cggcagcctg tgcatcaata
     5641 cgttggcaga cgaacatcag gatgttgccg aacattttgc cggattgacc ggcctgtcgc
     5701 ccgaagagcg gtttgcctac catatttggc atcgcggcaa aacgggacaa cttgaaatag
     5761 aaggcgcgtt ggcgcacctg cacgggcata ttgtcggcaa acatgaaatc ggcacgcatt
     5821 ttgtgtttta cgtcaggctc gacgaaatta aaaactgcgg gtgcaaacgt cccgcgctgc
     5881 tgtatttcag acggcagttt agatttttag actgatattc ggacagatat atgaaagcga
     5941 tgatactggc ggcaggacgc ggcgagcgta tgcgcccttt gaccgatacc actccgaagc
     6001 cgctgctcga tgtggcgggt aagcctctaa tcggttggca cctatgccgt ctgaagcagg
     6061 cagggtttac cgaaatcgtt atcaaccacg cttggctggg tcggcagata gaagaggctt
     6121 tgggcgacgg ctcggcttat ggcgtgaaca tcgcctattc gcccgaaccc gcaggcggtt
     6181 tggaaacggc aggcggcatc gcgcaggcat tgccgctgtt gggtgggcag ccgtttttgg
     6241 tggtcaacgg cgacgtgctg accgacatcg attttaccgc cgcgtttcag gcggcatcgt
     6301 ccctgccgga acatatttcc gcccatctgt ggctggtgga aaatccgccg caccatcctg
     6361 acggcgattt tttgctgttg ccggacggaa gcgtacagtc ggaagtatcc ggcggcaacg
     6421 gattgacatt cagcggcgtg ggtatttacc gtcctgaaat gtttgacgga atcgaagcgg
     6481 gcagtgtggc gaaactcgcg cccgtattgc ggggcgaaat gcggcaaaac cgcgtgagcg
     6541 gacagaagca tacgggcttg tggctggatg tcggcacggt atgccgtctg aaagaggctc
     6601 aagcccttgc aggggcttgg aagtgaaata aaacggtggc ttgccgagtc ggctgccgaa
     6661 cggttccgac cggatgtccg gcatattttc gtggaggcgt gaaaataggg cgttcggggc
     6721 tttccgtcca acaaatgcca tctgaagccg accctgtcgg atgcggcggt ttgccgtcgg
     6781 cgcggtgtcg gattttattg ggtaactttg ttcagaccgc cgcccgtcag attgtcaaaa
     6841 cccggtttca ggcggtatgg cggattcggt ttaacgtttc aacgccagca ccaacacgcc
     6901 cgccgttacc agccccaagc ctatccattc ctgcgtgttc gggcgttcgt ccaagaaaac
     6961 caccgccatc agcgcgacca agaccaggct gaatttgtcg acgggggcga cttgcgaggc
     7021 gttacccagt tgcagggctt taaaataggc gagccaagat gcgccggtag caagaccgga
     7081 taggataagg aatgtccagt tgcgccccgt aaagccgttc acaccctgcc atttgccggt
     7141 gtaggtcaaa aacaataaca aagcggcgag gatgaccaag gtgcggatga aggtagcgaa
     7201 atctgaatct ataccctgta aacccatttt ggcgaagatg gcggtcaatg aggcgaagcc
     7261 tgccgatgcc aatgcccaaa acagccatgc gttgctgctc atgttttctc cttggattgt
     7321 gaacaatatg aacggtattt ttgttgcagc gtcaaaaatt tcactgcggg tttggtgcgg
     7381 ataacgttat aatatgcctg atattatttt caatccacct gtttgtcgcc tgatgctttc
     7441 agacggcatg tccctcctca tttctaaagg aaaatcatga gcttcaaaac cgatgccgaa
     7501 atcgcccaat cctccaccat gcgcccgatt ggcgaaattg ccgccaagct gggtctgaat
     7561 gccgacaaca ttgagcctta cggtcattac aaggcgaaaa tcaatcctgc cgaagcgttc
     7621 aaactgccgc aaaaacaggg caggctgatt ttggttaccg ccattaatcc gactccggcg
     7681 ggcgaaggca aaaccaccgt aaccatcggt ttggcggacg cgttgcgcca catcggcaaa
     7741 gatgccgtga ttgccctgcg cgaaccttct ctggggccgg tgttcggcgt gaaaggcggc
     7801 gcggcaggcg gcggctatgc ccaagttttg ccgatggaag acatcaacct gcacttcacc
     7861 ggagattttc acgccatcgg tgcggcaaat aatctgcttg ccgcgatgct cgacaaccat
     7921 atctatcagg gcaacgagtt ggacatcgac cccaaacgcg tgctgtggcg gcgcgtggtc
     7981 gatatgaacg accgccagtt gcgcaacatc atcgacggca tgggtaaacc cgttgacggt
     8041 gtgatgcgcc ccgacggttt tgatatcacc gttgcctccg aagtgatggc ggtattctgc
     8101 cttgccaaag acatcagcga tttgaaagag cgtttgggca acatcctcgt cgcctacgcc
     8161 aaagacggca gccccgttta cgccaaagat ttgaaggcac acggcgcgat ggcggtcctg
     8221 ctcaaagatg cgattaagcc caatttggtg caaaccatcg aaggcacgcc cgccttcgta
     8281 cacggcggcc cgttcgccaa catcgcccac ggctgcaact ccgtaaccgc aacccgtctg
     8341 gcgaaacacc ttgccgatta cgccgtaacc gaagcaggct tcggcgcgga tttgggcgcg
     8401 gaaaaattct gcgacatcaa atgccgcctt gccggtttga aacctgatgc ggcggtcgtc
     8461 gtggcgactg tccgcgcttt gaaatacaac ggcggcgtgg aacgtgccaa cctcggtgaa
     8521 gaaaacctcg aagccttggc aaaaggtttg cccaacctgc tgaaacacat ttccaacctg
     8581 aaaaacgtat tcggactgcc cgtcgtcgtt gcgctcaacc gcttcgtgtc cgactccgat
     8641 gccgagttgg cgatgattga aaaagcctgt gccgaacacg gcgttgaagt ttccttgacc
     8701 gaagtgtggg gcaaaggcgg cgtgggcggt gcagacttgg cgcgcaaagt cgtcaacgcc
     8761 atcgaaaacc aaccgaacaa cttcaatttt tcctacgatg ttgagctgag tattaaagac
     8821 aaaatccgtg cgattgccca aaaagtgtac ggcgcggaag atgttgattt cagcgcggaa
     8881 gcgtctgccg aaatcgcttc actggaaaaa ctgggcttgg acaaaatgcc gatctgcatg
     8941 gcgaaaaccc aatactcttt gagtgacaac gccaaactgt tgggctgccc cgaaggcttc
     9001 cgcattaccg tgcgcggtat cactgtttcc gcaggcgcag gtttcatcgt cgccctgtgc
     9061 ggcaacatga tgaaaatgcc cggcctgccc aaagttccgg ctgccgagaa aatcgatgtg
     9121 gacgaacacg gcgtgattca cggcttgttc tgagcggttt ttgaaaccgg atgccgtctg
     9181 aagccgtttc agacggcatt ttttcggaac gcgggcggcg gtatgctata atccgccgtt
     9241 aaatttctct attttcagga aaaaacatga gtttgaaatg cggcatcgtc ggtttgccca
     9301 acgtcggcaa atccaccctc tttaacgcgc tgacccaatc gggtatcgaa gcggcaaact
     9361 atcctttctg taccatcgaa cccaacgtcg gcatcgtcga agtgcccgac ccgcgtatgg
     9421 ctgaattggc aaaaatcgtc aatccgcaaa aaatgcagcc tgccatcgtc gaatttgtcg
     9481 atatcgccgg tttggttgca ggcgcgagca aaggcgaagg tctgggcaac cagttccttg
     9541 ccaacatccg cgagactgac gcgattgtta acgtcgtacg ctgctttgac gacgacaaca
     9601 tcgtccacgt tgcaggccgc gtcgatccga ttgccgacat cgaaaccatc ggtacagagt
     9661 tggcgcttgc cgacttggca agtgtggaaa aagccatcgt ccgcgaagaa aaacgcgccc
     9721 gttcaggcga caaagacgcg caaaagctgg tcgatttgtg caaaaaactg ctgccgcatc
     9781 tagacgaagg caaacccgtg cgttccttcg gtttggacgc ggaagaacgc gcgatgctca
     9841 aaccgctgtt cctgctgacc gccaaaccgg cgatgtatgt gggcaacgtc gccgaagacg
     9901 gttttgaaaa caatccgcac ctcgaacgcc tgaaagaatt ggcggcaaaa gaaaacgccc
     9961 ccgtcgtcgc cgtttgcgcc gcaatggaaa gcgaaatcgc cgaattggaa gacgacgaaa
    10021 aagccgagtt cctcgccgaa atgggcttgg aagaaccggg cctgaaccgc ctgatccgcg
    10081 cgggctacga cctcttaggc ctgcaaacct acttcaccgc cggcgtgaaa gaagtccgcg
    10141 cttggaccat ccacaaaggc gacaccgccc cgcaagccgc cggcgtgatt cacaccgact
    10201 ttgaacgtgg cttcatccgc gcccaagtta tctcctacga agacttcatc gctttaggcg
    10261 gcgaagccaa agccaaagaa gccggcaaaa tgcgtgtgga aggcaaagaa tacgtcgtgc
    10321 aggatgggga tgtgatgcac tttttgttta acgtgtaacc caaatgcggc aggttttcag
    10381 acggctttgc cagaaatgcc gtctgaagcc ggttttggtg gttttcggcg tttccatacc
    10441 gccggaatgc ggctgcatca aaataaaatc ccgtccgcat ttccgatttg ccctccccga
    10501 ttcctgcaaa acaaaccgcc tgccccgctg ttgcaaaaag ccgtccggca ttccgaatat
    10561 cccgagcccc gatacaaaat gacctttcag acggcatttg cgccgccgcg tttcgagtat
    10621 agtggattaa ctttaaatca ggacaaggcg acgaaaccgc agacagtaca gatagtacgg
    10681 caaggcgagg caacgccgta ctggtttaaa tttaatccac tataaaaaca ttatgagcca
    10741 agccttaccc taccgcccgg acatcgacac attgcgcgcc gccgccgttt tgtccgtcat
    10801 cgtgttccat atcgaaaaaa attggctgcc gggcggattt ctcggtgtcg atatattctt
    10861 tgtgatttca ggctttttga tgacggagat cctccttcgc gaaatgtcgg ggggggggga
    10921 ggttttccct gaaggcattt tatatccgcc gcatcaagcg gattctgccc gcatttttcg
    10981 ccgtattggc ggcaacgctg gcaggcggct tctttttatt caccaaagat gatttctttc
    11041 ttttgtggaa atccgcgctg accgccttgg gtttcgcctc taacctgtat tttgcaaggg
    11101 ggaaggatta tttcgatccc gcgcaggaag aaaagcccct gctgcacatc tggtctttgt
    11161 cggtcgaaga acaattttac tttgtctttc cgatactgct gctgcttgtc gcccgcaaaa
    11221 gcctgcgcgt acagttcggc ttccttgccg cactgtgtgc cttaagcctt gccgcctcct
    11281 ttataccttc cgcgctcgat aaatattacc tgccccacct gcgcgcctgc gaattactga
    11341 taggatcgct gaccgccgtg tggatgcggt accggcaaca gcggaatctc gccgtcggga
    11401 aacggtatgc cgccgtcggc gcattgtttt ccgcgtgcat actgtccgcc tgcctgtttg
    11461 cctattcgga acaaaccgcc tatttcccag gccccgccgc tttgattccc tgtctggctg
    11521 ttgccgcgct gatttatttc aaccattacg aacacccgct taaaaaattt ttccaatgga
    11581 aaatcaccgt tgccgccggt ttgatttcct attcgcttta tctgtggcat tggccgatat
    11641 tggcctttat gcgctatatc ggcccggaca acctgccgcc ttattcgccg gcggcagcga
    11701 tcgtcctgac tctagcgttt tccctgattt cttatcactg catcgaaaag ccgtttaaaa
    11761 aatggaaagg ttcgttcgca caatccgttt tatggattta tgccttgcct atgctcattt
    11821 tgggggcggg ctcgtttttc gcgatgaggc tgccgtttat ggcgcaatac gaccgcttgg
    11881 ggctgacgcg ttccaacacc tcctgccaca acaataccgg caaacaatgc ctatgggggg
    11941 atacggaaaa acagccggaa ctgctggttt tgggcgattc ccacgccgac cattacaaaa
    12001 cattcttcga tgccgtgggc aaaaaagaaa aatggtccgc cacaatggtt tccgccgacg
    12061 cttgcgccta tgtggaaggc tgagaccttt gcaaaatccc ccaaaatccc ctaaattccc
    12121 accaagacat ttaggggatt ttccatgagc accttcttcc agcaaaccgc ccaagccatg
    12181 attgctaaac acatcaaccg cttcccgcta ttgaagttgg accaggtgat tgattggcag
    12241 ccgatcgaac agtatctgaa tcgtcaaaga acccgttacc ttagagacca ccgcggccgt
    12301 cccgccta
//
LOCUS       DBBZXW010000055        12274 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.055, whole genome shotgun sequence.
ACCESSION   DBBZXW010000055 DBBZXW010000000
VERSION     DBBZXW010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.055"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..303
                     /locus_tag="ACJJD2_001340"
     CDS             <1..303
                     /locus_tag="ACJJD2_001340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579871.1"
                     /translation="SFFEFQSFPINCLSIECLDSRLRGNDGGAVAVFSGKYPQAKILL
                     FSQKQKTKNRNLKFVIPAQAGIQCVELQLFRINFETLIPSFPRKWESSFLSFSHSR"
     gene            complement(396..1208)
                     /gene="murI"
                     /locus_tag="ACJJD2_001341"
     CDS             complement(396..1208)
                     /gene="murI"
                     /locus_tag="ACJJD2_001341"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HGG7579872.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDDNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            1395..1856
                     /gene="tsaE"
                     /locus_tag="ACJJD2_001342"
     CDS             1395..1856
                     /gene="tsaE"
                     /locus_tag="ACJJD2_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HGG7579873.1"
                     /translation="MSDFSPISRFLADEAATLDLGEAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFTTPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGDGRKCLLTAHTERGRESLPL"
     gene            1853..3103
                     /locus_tag="ACJJD2_001343"
     CDS             1853..3103
                     /locus_tag="ACJJD2_001343"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7579874.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRVPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPDTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYLNTSVLKRG"
     gene            complement(3161..4303)
                     /locus_tag="ACJJD2_001344"
     CDS             complement(3161..4303)
                     /locus_tag="ACJJD2_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HGG7579875.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERNIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVEGSNR"
     gene            complement(4352..4774)
                     /locus_tag="ACJJD2_001345"
     CDS             complement(4352..4774)
                     /locus_tag="ACJJD2_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579876.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(4767..5576)
                     /locus_tag="ACJJD2_001346"
     CDS             complement(4767..5576)
                     /locus_tag="ACJJD2_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HGG7579877.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEYAGSVWMMVQTREQWRQAQEKGADVVVWRVGNAAQ
                     AAAVDEVLKHGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(5658..6035)
                     /gene="acpS"
                     /locus_tag="ACJJD2_001347"
     CDS             complement(5658..6035)
                     /gene="acpS"
                     /locus_tag="ACJJD2_001347"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HGG7579878.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(6235..7002)
                     /locus_tag="ACJJD2_001348"
     CDS             complement(6235..7002)
                     /locus_tag="ACJJD2_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7579879.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFIMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(7012..7551)
                     /locus_tag="ACJJD2_001349"
                     /pseudo
     CDS             complement(7012..7551)
                     /locus_tag="ACJJD2_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
     gene            complement(7723..7944)
                     /locus_tag="ACJJD2_001350"
                     /pseudo
     CDS             complement(7723..7944)
                     /locus_tag="ACJJD2_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="taurine catabolism dioxygenase TauD"
     gene            complement(7943..8050)
                     /locus_tag="ACJJD2_001351"
                     /pseudo
     CDS             complement(7943..8050)
                     /locus_tag="ACJJD2_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8096..8824)
                     /gene="pdxJ"
                     /locus_tag="ACJJD2_001352"
     CDS             complement(8096..8824)
                     /gene="pdxJ"
                     /locus_tag="ACJJD2_001352"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HGG7579880.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAGFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(8848..9639)
                     /gene="recO"
                     /locus_tag="ACJJD2_001353"
     CDS             complement(8848..9639)
                     /gene="recO"
                     /locus_tag="ACJJD2_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HGG7579881.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVSFVPVSASWYGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMPELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCRDTDALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(9673..10800)
                     /gene="pheA"
                     /locus_tag="ACJJD2_001354"
     CDS             complement(9673..10800)
                     /gene="pheA"
                     /locus_tag="ACJJD2_001354"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HGG7579882.1"
                     /translation="MLECTANHRSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(10839..12071)
                     /locus_tag="ACJJD2_001355"
     CDS             complement(10839..12071)
                     /locus_tag="ACJJD2_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HGG7579883.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
BASE COUNT         2877 a         3402 c         3135 g         2860 t
ORIGIN      
        1 agtttttttg agtttcagtc atttccgata aattgcctta gcattgaatg tctagattcc
       61 cgcctgcgcg ggaatgacgg cggagcggtt gctgtttttt ccggtaaata cccacaagct
      121 aaaatcctgt tattttcaca aaaacagaaa accaaaaaca gaaacctgaa attcgtcatt
      181 cccgcgcagg cgggaatcca gtgcgttgag cttcagctat ttagaataaa ttttgaaact
      241 ctaatcccgt cattcccacg aaagtgggaa tccagttttt tgagtttcag tcattcccga
      301 taaattgcct tagcattgaa tgtctagatt cccgcctgcg cgggaatgac gggattttag
      361 gtttctgtaa tctcgggcag ctttccgtca tcgttttaac ccaaagacac catttcaatc
      421 tgctccatcg tcctgcccag aaaacgctcg ccgatggttc tgaatttcaa aggaatatca
      481 ctgacataaa aacgatagtc gggattattg tcgtcggtat tgagtaatcc ctcctgcgca
      541 aggacgcgtg cggtttcttc agccgtcgta atcgcggaat cgaccaacgc gacattgtgc
      601 gcctccctgc cgattaaggg cttgagcaag ggaaagtgcg tgcagcccaa caccagcgta
      661 tcgatgccgt ctgcaagcaa tggtttgagg tattcgcata cggtcaggcg ggtaacttcg
      721 tgttccaacc agccctcttc caccaaaggg acaagcagcg gcgcggcctg cgtgcggacg
      781 agcgtatcgg ggttgttcct gtggatggcg cgcgcatagg cgttgctgtt gactgtcgta
      841 ttggtggcga taatgccgat tttattgttg cgcgtcgttg ccagcgcggc tttcgcgccg
      901 gcggaaatca cgtccaaaac cggcatattg cccgtctttt ggcggatttt ctgccccgcc
      961 accgccgcaa tcgtattgca cgcgataacc atcgccttaa catcgtgttc caataaaaaa
     1021 tcgacaatct gcatcgagaa attttcgatg gtcgccttag atttcgtccc gtaaggcacg
     1081 cgcgccgtgt cgccgaaata aatgatgttt tccatcggca gccgttccat cagcgcacgc
     1141 acattggtca aaccgccgat tcccgagtca aaaacgccga tgggtcgctg cctgccgata
     1201 ttttccatcc tttttccaat tcgtcctaaa catacaatcc gcgtattgta cacgcgccgc
     1261 tttttcttga cagccgttgc cgtctgaaag caggatgcgg atttggctgt tataatgtac
     1321 ggcaatgccg ccgggcgcac ggttttccga ccgcctgccc ctccgatccg ccacataaaa
     1381 gttgtaaagc ccctatgtct gatttttccc ccatttcccg attccttgcc gatgaagccg
     1441 ccacactcga tttgggtgaa gcatggtctt cccgtttaaa cgcaccgctg gtcatttacc
     1501 tcgaagggga tttgggtgcg gggaaaacca cgctgacacg cggcatcctg cgcggattgg
     1561 gtcatcaggg cgcagtcaaa agcccgactt acgccatcgt cgaatcttat ccgctggaac
     1621 gcttcacctt gcaccatttc gacctctacc gtttcaccac acccgaagaa tgggaagatg
     1681 ccggattgga cgaactgttt gccgcaaaca gcgtctgcct aatcgaatgg ccgcaacagg
     1741 gcggggaatt tacgccgcct gccgacatca ccgcaacatt gacacacgac ggcgacggca
     1801 gaaaatgcct gctgaccgcc cataccgaac gaggacgcga aagcctgccg ctatgaccaa
     1861 actgacacga agacaaatca tccgccgcac cgccggcaca ctgttcgccc taagccccat
     1921 cgcatccgcc gttgccaaaa cggtacgcgt accacaattc accgccgcac ggatatggcc
     1981 gtcccacacc tacacccgcc tgacgctgga aagcaccgcc gcgctcaaat accagcactt
     2041 cgcgctcgac aatccgggca ggctggtcgt cgatatacaa aacgcgaaca tcaataccgt
     2101 attgcacgga ctttcccaaa aagttatggc ggacgacccc tttatccgca gcatacgcgc
     2161 cggtcagaac acgcccgaca ccgtccgcct cgtcatcgat ttgaaacagc cttcctacgc
     2221 gcaagttttt tccctcccac ccgtcggcgg ctttaaaaac cgcctcgtcg tcgatctcta
     2281 tccgcaaggg atggatcccg acgatccgat gatggcgctg cttaacggca gcctgaacaa
     2341 aacccgtcgc ggctcccctg aagccgacct cgctcaaaac actcccgcac aaaccgaacg
     2401 cggcaaaaac gggcgcagac ccgtcattat gatcgacccc ggacacggcg gcgaagaccc
     2461 cggcgccgtc agcccgggcg gtttgcagga aaaacacgtc gtcctctcca tcgcccgcga
     2521 aaccaaaaaa caattggaag ccttgggtta caacgtcttt atgacgcgca acgaagacgt
     2581 gttcatccca ttgggcgtgc gtgtcgccaa agggcgcgca cggcgggcgg acgtattcgt
     2641 ctccatccac gccgacgctt tcaccagccc ctccgcgcgc ggaacggggg tttatatgct
     2701 gaacaccaaa ggcgcgacca gctctgccgc caaattcttg gaacaaaccc aaaataatgc
     2761 cgacgcggtc ggcggcgtac cgaccagcgg caaccgcaat gtcgataccg ccctgctcga
     2821 catgacccaa accgccacgc tgcgcgacag ccgcaaactc ggcaaactgg tgcttgaaga
     2881 attgggcagg ctcaaccatc tgcacaaagg cagggtggac gaagccaatt tcgccgtttt
     2941 gcgcgcaccc gatatgccgt ctatcctggt cgaaaccgcc ttcctgtcca atcctgccga
     3001 agagaagctg ctgggcagcg aatccttccg ccggcagtgc gcccaatcca tcgcctcggg
     3061 tgtccaacgc tacctcaata catccgtatt gaagcggggt tgattccgaa aaataaatgc
     3121 cgtctgaaca tttttcagac ggcatttttg tacactttcc tcaacggttc gatccttcca
     3181 ccatatcaat caggaacagg cggcaatcga ggttgccgtt ataaagcgga attttgcgtt
     3241 ttggcgacag gcgcatgaat ttgggcattt cccgatctcc ggtaaacatt gccgccaacc
     3301 agcctgcgta atatttcttc aaccacgtcc ccaactgcgg ataaagcgcc tgcaaggcgc
     3361 ggacttcctc aaggcgcacg ccgtagggcg gattggacac cataatgccg cccacgccgt
     3421 tcggacggac ggattgcgcg tcggcaacgc tgaaggaaac gatgtcgtcc accccggcac
     3481 tgcgtgcgtt ggccaatgcc gtctgaatga tgcggcggtc gctgtcgctg cccgaaatcg
     3541 gtgcaaaagc cggtttaacc tgcgcttcgg cacggcggcg caaatccgac cacagcgttt
     3601 tatcgaaatt ttgcagtttt tcaaaaccga aacggcgcat catacccggc gcgcggcggg
     3661 cggcaatcca agcggcttcg atagcaatcg tgccgctgcc gcaaaacggg tcttgaaacg
     3721 gctgcgtgcc gtcgtagcct gccgagagca gcaatccggc ggcaaggttt tcgcgcagcg
     3781 gggcttcgcc ggtatcgaga cggtagccgc gtttgaacag ggcttcgccc gaagtgtcga
     3841 tgaagatttc gacattgcgt tcgtccaaaa aggcgtggat gcgaacatcg ggcgcggctt
     3901 tgtccacgct cggacgtgcg tcgtaaatgt cgcggaaagc gtcgcagacg gcatctttga
     3961 cggtcagtcc gacaaattgg atgctcttaa cgttggcacg ctttgcctcg actttgactt
     4021 tgaacgtctg ctgtaaagta aaccaattaa accagttgat atttttggcg agtttgtaga
     4081 tgttgcgctc attgcggtat gtccctttgg tcaggcgcag caggatacgg ctggcagtac
     4141 gcgaatgcag gttggcggcg taaacctgtt ccaatccgcc ccggcaggaa acgccgccgt
     4201 caaacacttg tacatcggta cagccgaggc tttcgagttc ttgagataaa acggtctcca
     4261 agccgcgcgg gcaggtggcg aaaagtgtat ataaagtatt cataacgtgt cctttccgga
     4321 cggatgttcc ggcaatggcg gattgaaagg tttattcggc ggtaaatgcc gtctgaaatg
     4381 tccgactgcc gattgtaatg tctgccgtaa aatcgcgcct gccttcgaca cagatgggca
     4441 ggcggatgcg tactgcctgc caagtccccg acggttgccg ctcgaacata tagcggttga
     4501 aacccatatc catatttttc atactgaagc tgatgctgac ctgttccgtg ccggcgggcg
     4561 cgtgttcgat ataaatatca aacggttttt tggttgaaac ggcggcggcg cggacgcggc
     4621 ttccgtccgg cagcgtgcaa ccctcggtca aatcgcattg cgccgccaca gcttgcggct
     4681 gctgcgcctg ccaccattgc aacaaaacga gcttgacggc ggcaaaggca atcagcagca
     4741 gtgcggcaag cagtaattta cggtttttat tcatgattct tccctattgt ttcatccctt
     4801 accaccacgt gcgcccccaa tccgagccat agttttccat aacgtgcaac cgtctgtccg
     4861 tttgctgcaa gtacgagcgg cacggatacg ccgtgcttca acacttcgtc taccgctgcg
     4921 gcttgtgcgg cattaccgac tcgccagacg accacatccg cgcccttttc ctgcgcctgc
     4981 cgccattgtt cgcgggtctg caccatcatc cacacgctgc cggcgtattc gggtctgtcc
     5041 tgccattgcg ccgcctccat caaaacgttc gcaccgcttc cctctgccga acccaaaggc
     5101 aggacgcggt acgcgcccat actgttttct ccgtgcaaac ccgttttcag gctgccgtac
     5161 aaacggcgcg ggacggacag cgaacgcaaa agcgcgccgt tggcgggcag catgggggca
     5221 acggtaaaat cacccgcctt ctgccaagac cattcctgcc cttcgcggga ttgcggttcg
     5281 cccgtccatt ggtcggggtt gacccatagg aatttcaggc agacgcgggc gtgttcgtag
     5341 gaatggattt tggtcaacca aggcgtggcg gcgaggatgc ggatgccgag ttcttcttca
     5401 aactcgcgtt gcagggcttg gaagtcggtt tcgcccgctt cgaccttgcc gccggcaaat
     5461 tcccaatatc cggcataggg tttgccttcg gggcgcgagc tgagcaggta gttgccgtct
     5521 gaatcgagca ggatgccggc aacgacgcgg ataagggggc gggtgtcttg aatcatggcg
     5581 ggtacgcggt tggtcggtcg gagtgcaaat gagggatggg caatgccgtc aacgggtttt
     5641 ccgcatttca gacggcatta tttttcggca acgacaaacg ccaatacggt gtcttcttcg
     5701 tcgctcatgc tgaggctgac gcggctgatg ccttgttcct ccagccattt ggacagggcg
     5761 gggccgtaga aaaattcggg cttgcccaat gcgtcatgcc cgatgccgat gttgcggaag
     5821 gaaaccgcgc cgcgtatgcc cgtgccgacg gctttggcga aggcttcttt ggcggcaaag
     5881 cgtttggcga ggtagttgac gggtttgccc gcttgcggaa attcaagcag ctcttccgga
     5941 gtgaggatgc gcccggcaaa cgcctgtccg aattttttgt ttaagcggat gatgcgcttg
     6001 agggaaacaa tgtctgtgcc gatgccgtaa atcatatttg cgctccttcg cccttggttg
     6061 cgggtagtga tgaatgtgat gatgaatgcc gtcaatttct tggggcgtta aaatggcgtg
     6121 aatatccact tttggggttt tgtcggtaac aattttcact gtaacctttt gcatttgaaa
     6181 ttctaaaaca tcgtgccaat tatttaataa ggagttaagg catttaataa tgaattaaag
     6241 tttgattaaa cccgaatgcc cgattttcag agccaatacc aataaaacaa taaaaattaa
     6301 cattttaaaa aaatttgggc taatcttagt ccttaaccga attccaacat acaatccaat
     6361 aacagacaat acggacagta aaaatattaa accgtattca ctcttattta ataaccaata
     6421 ctggtctctt agcatatata tttgaacaat tttcgccaaa agatagcata gattgcttga
     6481 ttttacgata cgatttttat tttctgtttc gctaagcaaa aatattaaca atatgggaga
     6541 catggcattg gttgaaccgc cgatgatgcc tgccaaaaac ccaaaaagaa ccatattctt
     6601 attattggca actacttgaa tattttttgc ttttgcacat acatttaaaa taccattgac
     6661 agaataatac aatgtaatga ttgccatcag taaaagcagc caagacactg gaagtatcaa
     6721 aagcaacttc acccccaaaa tgctgccaac gacgctgccg atagcaagca atttataggt
     6781 ttttaaataa taaacaatct cttgccaaaa accctttttg ttattgctgc atagaaccaa
     6841 caagctcatt aacaggcttg gtaatgccac caaggcaaca accttagaca atggcatgat
     6901 aaaagccaat gcggttgtac cgagcatcgg aaatcccatg cctgtaattc cgtgcagtat
     6961 tgcggcagca acaaaaacga tagattgcat tatttcttgc ataaccgtcc tttatacagt
     7021 aattcttgct ctaatataat gcctgttttt atccgtataa tcagttctgg catgcaagcc
     7081 attgacattg tcaataataa tcaaaccatc atcttgtgca gaaaattctt gaatatcact
     7141 cgcatttttt ataacattta caagataatc aagtgcaagt accatttcct ttgatacttt
     7201 atttctattt tcttcaatac ctttatagat acaatcactt ctaaatctaa tcatttgagt
     7261 attgaccgat aagatattac cccatctcac accttgtttt ttatcaaatg atgctggtgt
     7321 tttaaatgga tataaattgc ccgttaatgt ttttaagtgt tttttaccgg tttctgtttt
     7381 agataactga ttgacaatat ctgatgaact taaaaatagg gaattacctc catcattggc
     7441 tgattttact acatacataa ccaaataact ttccgggttt tcactaaaag atgaatcact
     7501 atgaagtgga cattctccaa catcttccga gaaagttata tcattattta tagtggatta
     7561 acaaaaacca gtacggcgtt gcctcgcctt agctcaaaga gaacgattct ctaaggtgct
     7621 gaagcaccaa gtgaatcggt tccgtactat ctgtactgtc tgcagcttcg tcgccttgtc
     7681 ctgatttttg ttaatccact atattacata atcatcgcct caatatttaa tatcccaaaa
     7741 tatagattta aaaccatcgc ctttgtggtt tgtcagcatt cctaattgag atagaaagtc
     7801 aaataatttc ttgtttctcc ggctgccatc aagatggttt agattaagac cgcgaacaat
     7861 acaataacca atacgctgta ctgtattgtg aatttcttct atcaaactat tattgtttgc
     7921 agataaaata tacttttgat tcatatagtg aattaaattt aaaccagtac ggcgttggct
     7981 tgccttgccg tactatttgt actgtctgcg gcttcgccgc cttgtcctga tttaaattta
     8041 atccactata acatatccct gtcgtgaaat gctgtctgaa agggtttgcc tgcccttacg
     8101 gcagcagcct tgccctgaac atcgcctcct tcatctggcg cacggcttcg ggcagtccga
     8161 ggaagagggc ttgggcaatc agcgaatgcc cgatgttcag ttcgcggatg gcgaggattt
     8221 gggcgatggg ggtaacgttg tgtatggtca gtccgtgtcc ggcgttgacg accaagccca
     8281 aatcgccggc aaaatgcgcg ccgttttgca gacgctcgaa ttgcttgagt tgttcggcgt
     8341 ggctgcgcgc gtcggcatac gcgccggtgt gcagctcgac aacgggcgcg ccgacatcat
     8401 aggcggcttg gatttgcctg tcgtcggcat cgataaagag agagactcgg atgcctgcgt
     8461 cggtcaggat tttggtgaac ccggcgattt tttcctgttg cgccaatacg tccaagccgc
     8521 cttcggtcgt gatttcctga cgtttttcag gcacgatgca cacgtcttcc ggcatcactt
     8581 taagcgcgtt ttcgagcatt tcttccgtca acgccatttc aaggttcagg cgcgtgcgga
     8641 tggcgttttt gacggcaaac acatccgcgt ctttgatgtg gcggcggtct tcgcgcaggt
     8701 gcatggtaat caaatccgca ccgtgcgttt cggcaaccag tgccgcctcc acggggctgg
     8761 gataagtcgt gccgcgcgca ttgcggacgg tagcgatgtg gtcgatgttg acacctaaaa
     8821 gcataatctt tccttttatt tctgccttca gacggcattt gaagccgtgc cgtccgaagt
     8881 cgggacggtt tcccgggcgg tttctttgcg gtcaaactgc cgtatctgtt ccaacacctg
     8941 ccgcgatttc agcccctcgg gcaacaggtg gcggataaaa agccgtgtga ttttcaatgc
     9001 ctgttgcagg ctttcggcgg tgcggaaact gccttcgcgc aaatcgatca ggctttgccc
     9061 ttcgacaatt gcgccggcct cgtgcgaaag cgcgtccgtg tcccggcata cgggcatgac
     9121 cgcctcttcg ggcatcagcc ggtaggtttt atccgccaaa atatcgccgc ccgtgccgtc
     9181 ggcgtgcaaa tcgggggcaa cgcccaaggc attgagcagc ttccactcga agcggcgcaa
     9241 atcggcaatg tggttggctt cacgacacac cgcctccatc acttttgcca acgcgtcgta
     9301 cagttcgggc atcgggtctt cgcgcgcggt cagtttcaac accagttcgt tcacatacag
     9361 accgctgaac aacgccctgc cctgcggctg ccgccatccg ccgacccatt cggcacggtg
     9421 cagggttttg agttcctgac tgccgtacca cgacgcactg acgggcacga aggaaaccag
     9481 cacgccgcgc aattcgctct gccgcttgcg cgcgcttctt gccaaaagtg ccacacgccc
     9541 gtaacggcgg ctgaacgctt cgacccgcag gctgctttcg cgccatggcg aggaagccaa
     9601 caggaagaca ggttcgtggt tgactcggtg ttcggacatc atgcctgaaa tgccgtctga
     9661 acgctgctgc cgctacaaaa cggcggtcgg gtacgaaccg atgactttga cgaacgaagc
     9721 gcgttcgccc aagcgttcca atgccgtctg aatctgcgcg tcccggcggt gtccttcgat
     9781 gtcgatgaag aacaggtatt cccacaaaac ggatttactc ggacggctct caaacttggt
     9841 catggaaata cccgactcag tcagcggttg cagcagcgag gcaaccgcgc ctgcccggtt
     9901 gggcgcggaa acggccagcg aagtcttgtc gctgccgctt gcaccggttt cgtgatgtcc
     9961 catcaccaag aagcgcgtgg tgttgttcgg ttcgtcttcg atgcactcgg caaccatatc
    10021 gagtccgtag atttccgccg ccgtgcgtcc ggcgatggcg gcaaccgtac cgtcgtccga
    10081 ttcggcaacc agccttgcgg cttcggcatt gctggacacg gcaatccgtt cggcgttggg
    10141 caggtgtctg cccaaccagt cgttgcactg cgccaacgcc tgcgcgtggg aaaagacttt
    10201 ggcaatgcct tcggtgctgc cgttgttttt acgcaaaagg ttgtggtgga tgcgcaaaac
    10261 gacttcgccg cacgcctgca acgcggtaac ggcaagcaaa tccaacgtgc gcccgaccga
    10321 gccttcggtc gagttttcca cgggcgcgac cagataatcc gcctgacggg tttcaacctg
    10381 cttgaagcag ttgtctatgg tcggacacgc catggtgtgc gcggcgtgtc cgaaatgctt
    10441 gatcgccgcc tgctgggtaa acgtgccctg cggccccaga taggcgatgg tcagcgggcg
    10501 ttcgacggcg aggcactcgc tcatcacttc ccgaaacagg cgtgctaccg attcgtcggg
    10561 cagcgggcct ttgttcaaat cctgaatgcg gcgcaacacg gcgacttcgc gttcgggacg
    10621 gtacactgcg cccgtgcctt tcagctcgcc gatggcgtgg gcgtgttgcg cacgttcgtt
    10681 gagcaggcgc aggatttcgg catcgatggt gtcgatggcg ttgcggtggg gaaggaggag
    10741 ttcgtcgata gtttgggaca taatttcgcc tgaacggtgg tttgccgtgc attctaacat
    10801 caaatgccgt ctgaaacggt ttcagacggc atttgatgtt aaaggtattc gctctgttcg
    10861 ttttctttcc acgcacgatg tgagcagagc cacagaagcg caatgccgca agaggtggac
    10921 gcggtcatcg ttgccgccat cacggttgcc gaaccgtcgt gcaagaaggt cgccgccata
    10981 cccacccccg cgccgattaa agattggaat acacccaata cggcgtttgc gctgccgccc
    11041 tcttctttga aataagacat aaagcatgcc tgcgtgttcg caccgaccaa gccctgcgta
    11101 ccgacggaaa acatcacgca cgcgaccagc agccaaaacg ggggcaaccc gaaaaacagc
    11161 acggcggcga gttgggacag gttggcggca aactggacga caatccccca cagcaggatg
    11221 ctttgcggat gcacgccggt tttgagccgc cacgcggtaa cgcggttgaa aaacatcatc
    11281 gtgatgatgt tgagtgcaaa cgcccaagcg tattgatgag gcgtaacacg gtagagctgc
    11341 tggtacacga aggaagattc ggtcagaaag gcgaacatcg aaccgaagct gaatgcctga
    11401 aaaaacagat aacccatcgc ggcacgggtt ttcaatacgc gtttgaaccg cccagccacc
    11461 agcccgaaca catcccgtcc gattttgccg ccgacggcag gcttgggcag gaaatactgt
    11521 accaaaccga gcagcaccag cgaatacgcc gccagaaaaa caaaaatcgc ctgccagcca
    11581 cccaagccct gcaacaatgc gccgaccatg ggtgcgacca gcggcacaac catcaaaatg
    11641 atgccgataa gggcaaacat ctgggcggct ttgcgtccgg aataataatc gcgcaccatt
    11701 gcgccgacga tgaccacagt catgcccgca ccgaatgcct gcacgacgcg caggttgagg
    11761 agctgttcgg cactcgaagc aaatacgatg gcggcaacgg caaggcagta gacggccagt
    11821 ccggtcagcg cgacgggttt gcgccctttg atgtcggaca ccgaaccgcc gaccacctgt
    11881 ccgaacgccg tgccgaacat aaacaaactc aggctctgtt cgatgcggtg gacatccgcg
    11941 ttcagcgact gcgccatttc gggaatcgcg ggcaggtagg catcgatgga aaacggcatc
    12001 agcgtaacca gcatcgccat caaaaccgcc atcagttttt cgctcatttc aggataatgg
    12061 gcagaaggca taaattctcg tccgattcgc aaacaaaccg cccggcggcg gaaaacacaa
    12121 tacgcggaaa cggaaaattt taacacaccg gcacaaacag gcggcaacaa aagccccggc
    12181 aaaaccggac gaaccggaac gatatagtgg attaacaaaa accagtacag cgttgccttg
    12241 ccttagctca aagagaacga ttctctaagg tgct
//
LOCUS       DBBZXW010000056        12173 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.056, whole genome shotgun sequence.
ACCESSION   DBBZXW010000056 DBBZXW010000000
VERSION     DBBZXW010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12173
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.056"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            241..978
                     /locus_tag="ACJJD2_001356"
     CDS             241..978
                     /locus_tag="ACJJD2_001356"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HGG7579884.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGCELIRED"
     gene            981..1667
                     /locus_tag="ACJJD2_001357"
     CDS             981..1667
                     /locus_tag="ACJJD2_001357"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HGG7579885.1"
                     /translation="MAGLTFEQTVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIVRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            1826..2689
                     /locus_tag="ACJJD2_001358"
     CDS             1826..2689
                     /locus_tag="ACJJD2_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG7579886.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEHIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2751..3320)
                     /locus_tag="ACJJD2_001359"
     CDS             complement(2751..3320)
                     /locus_tag="ACJJD2_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HGG7579887.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3478..4338
                     /locus_tag="ACJJD2_001360"
     CDS             3478..4338
                     /locus_tag="ACJJD2_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HGG7579888.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            4474..4812
                     /locus_tag="ACJJD2_001361"
     CDS             4474..4812
                     /locus_tag="ACJJD2_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579889.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRSNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5180..5533
                     /locus_tag="ACJJD2_001362"
     CDS             5180..5533
                     /locus_tag="ACJJD2_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HGG7579890.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAVWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5523..6389
                     /gene="atpB"
                     /locus_tag="ACJJD2_001363"
     CDS             5523..6389
                     /gene="atpB"
                     /locus_tag="ACJJD2_001363"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HGG7579891.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6446..6682
                     /gene="atpE"
                     /locus_tag="ACJJD2_001364"
     CDS             6446..6682
                     /gene="atpE"
                     /locus_tag="ACJJD2_001364"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HGG7579892.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6753..7223
                     /locus_tag="ACJJD2_001365"
     CDS             6753..7223
                     /locus_tag="ACJJD2_001365"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HGG7579893.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7228..7761
                     /locus_tag="ACJJD2_001366"
     CDS             7228..7761
                     /locus_tag="ACJJD2_001366"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HGG7579894.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAIIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7772..9319
                     /gene="atpA"
                     /locus_tag="ACJJD2_001367"
     CDS             7772..9319
                     /gene="atpA"
                     /locus_tag="ACJJD2_001367"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HGG7579895.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9344..10219
                     /gene="atpG"
                     /locus_tag="ACJJD2_001368"
     CDS             9344..10219
                     /gene="atpG"
                     /locus_tag="ACJJD2_001368"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HGG7579896.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10257..11654
                     /gene="atpD"
                     /locus_tag="ACJJD2_001369"
     CDS             10257..11654
                     /gene="atpD"
                     /locus_tag="ACJJD2_001369"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HGG7579897.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRAIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11665..12087
                     /locus_tag="ACJJD2_001370"
     CDS             11665..12087
                     /locus_tag="ACJJD2_001370"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HGG7579898.1"
                     /translation="MSIMEVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         2990 a         3118 c         3141 g         2924 t
ORIGIN      
        1 aattatttgc cgttttggtg cgaaccgctg cctttgcccg tttcagacgg cattgtccga
       61 aatggttgcc tgcttcctgc cttattgaca aaaaaatgct ttcccgataa tatcctacga
      121 aaattaacct gccgatttga cacagcttgc gggcataaca gctaaagcgt tccgacaatt
      181 ccagctttat cttccgcgcc cgttgtgtcc gacatcgggc tttgttgtat gggaaagaca
      241 atgattattt tggacaaggt ttccaagcat taccaaacgc gcgacaagac ccgttttgcc
      301 gccgtcgagc cgaccagcct cgaaatccgc gacggcgaaa tcttcgggct gatgggctat
      361 tccggcgcgg gcaaatccac cctgttgcgg ctgattaacc tgttggaacg ccccgacacg
      421 ggcaaggtca acgtctgcgg acaagagctg accgcgctcg atgccgccgc attgcgtcag
      481 gctcggcaga atatcggcat ggtgtttcag cagttcaacc tgttgaacaa ccgcaccgtc
      541 gccggcaacg tcgccttccc attggaaatc gccggatggc cgtctgaaaa aatcaaagcg
      601 cgcgttgccg aatgtctcga aatcgtcgga ctgaccgaac gcgccggcca ctatcccgcc
      661 cagctttcag gcgggcagaa acagcgtgtc ggcatcgccc gcgcactcgc gcccaaaccc
      721 caagtcatcc tcgccgacga acccacttcc gccctcgacc ccgccaccac gcgcagcgtc
      781 ttggaatgtt tggaagacat caacaaacga ttcaacgtaa ccatcgtcat cgtaacccac
      841 gaaatgagcg ttatcagacg actgtgcgac cgcgccgccc tgttggataa aggcaaagtc
      901 gtcgaaatcg tcgaagtacg cggcaaccaa atccacgccc gatccgacat cgggtgcgaa
      961 ctgattcggg aggactgaat atggcaggct taacatttga acaaaccgtt tccaacatca
     1021 tcggtatgaa aggcgaaatc gtccgcgcat tgggcgaaac cttcgtaatg gtcggtttgt
     1081 ccaccacatt cgccgtcgtt ttcggcacgt tgctgggcgt gttgctcttc gtaacttcca
     1141 gccgccaact gcattacaac aagccggtga acttcctgct cgacaacctc gtcaacctca
     1201 tgcgcgcctt ccccttcgtc attttgatga ttgcgatgat acccgccaca cgcgccatcg
     1261 tcggcagcac catcggcccg gttgccgcct cgctggtgtt gagcgtgtcg ggattgtttt
     1321 attttgcccg actggtggaa caaaacctgc gcgaagtccc caaaggcgta attgaagccg
     1381 ccgccgcgat gggtgcgccg ccggttgcca tcgtccgcaa agtcctctta aacgaagcgc
     1441 gcgcgggcat ggtttccagc attaccgtgc ttgccatcgg gcttttgtca tacagcgcgg
     1501 cggcagggat gataggcggc ggcggcttgg gcgacctcgc catccgctac ggctactacc
     1561 gctaccaaac cgaagtcatc gtcttcatcg tcgccctcct cgtgctgctg gtcatcctga
     1621 ttcaaagcac cggcaacgca ttggcgcgga aattggataa acgttaaacc cgaatgccgt
     1681 ctgaacgcca aaacccccac cgctatccga aaaatgctat aaaatccccc tgttcgcggc
     1741 aaatgccgtc tgaacgccga atctggacgg caggactccc tgcccgtcat ttttgtttga
     1801 aactgccaca acatcaggag aaaatatgaa aaccttcttc aaaacccttt ccgccgccgc
     1861 actcgcgctc atcctcgccg cctgcggcgg tcaaaaagac agcgcgcccg ccgcatccgc
     1921 ttctgccgcc gccgacaacg gcgcggagaa aaaagaaatc gtcttcggca cgaccgtcgg
     1981 cgacttcggc gatatggtca aagaacacat ccaacccgag ctggagaaaa aaggctacac
     2041 cgtcaaactg gtcgagttta ccgactatgt gcgcccgaat ctggcattgg ctgagggcga
     2101 gttggacatc aacgtcttcc aacacaaacc ctatcttgac gacttcaaaa aagaacacaa
     2161 tctggacatc accgaagtct tccaagtgcc gaccgcgcct ttgggactgt acccgggcaa
     2221 gctgaaatcg ctggaagaag tcaaagacgg cagcaccgta tccgcgccca acgacccgtc
     2281 caacttcgcc cgcgtcttgg tgatgctcga cgaactgggt tggatcaaac tcaaagacgg
     2341 catcaatccg ctgaccgcat ccaaagcgga cattgccgaa aacctgaaaa acatcaaaat
     2401 cgtcgagctt gaagccgcgc aactgccgcg tagccgcgcc gacgtggatt ttgccgtcgt
     2461 caacggcaac tacgccataa gcagcggcat gaagctgacc gaagccctgt tccaagaacc
     2521 gagctttgcc tatgtcaact ggtctgccgt caaaaccgcc gacaaagaca gccaatggct
     2581 taaagacgta accgaggcct ataactccga cgcgttcaaa gcctacgcgc acaaacgctt
     2641 cgagggctac aaatcccctg ccgcatggaa tgaaggcgca gccaaataag gcagtcgtat
     2701 aaaatgatgc cgtctgaacc gtatccgtgt tcagacggca tttttgtcct ttaatccgcc
     2761 attccctgcc attccgccga atccggcgta tcgattccga acagcgacaa agcgtgtgca
     2821 acactgtgcg ccactatgtc gtccgccgtc tgcggtttgc ggtacatcgc aggaacaggg
     2881 ggaaacacca cgccgcccat ttccgttacc cgcttcatat tgtccaaatg ggcaaggttc
     2941 agcggcgttt cgcgcaccat cagcaccagc cgccgccttt ccttcaaaac cacatccgcc
     3001 gcacgcgtca agaggttgtc gccgaagccg tgcgcgaccg aggcaagcgt ccgcatcgaa
     3061 cagggggcga ccagcatccc gtccgtttta aacgtaccgc tggcaatgca cgccccgata
     3121 ttgccgatcg gatgcacgaa gtccgccaag gcatatacct catctctcgc ataagccgtt
     3181 tccgaagcgc gcgccatctc cgcacctttc gataccacaa ggtgcgtttc gatatcttgc
     3241 gcgcgtaaaa gttccaaagc cttcacgccg tattggaaac cgctcgcccc actgatgccg
     3301 attatcaaac gccgtaccat catccgcctt tcccataaaa ccgcctgcaa cggcaaaccg
     3361 gctattatag tgaaaaaaca gaaatccgat aaatacggat acaaattgtc ggcaacaccc
     3421 aatatccgat aaaatatccg atttaacatc ctatctgaat aggcacggga gggcggtatg
     3481 gcaaaagtaa aaggcggatt ggggcgcggt ttggattcgc tgctcgccaa cggcgcagac
     3541 aacagcagcg gcgaccgatt gaccacggtt gcggttaaag atatccggcc cggccgctat
     3601 caggcgcgtg ttcaaatcga tgacgaagcc ttgcaggagc tggcggattc gattaaggcg
     3661 caaggcgtga tacagcccgt catcgtgcgc gaacacggac tgtcccgata cgaactgatt
     3721 gcgggcgaac gccgttggcg cgccgcacag attgccggcc tgaccgaaat ccccgccgtt
     3781 atcaaaacca tcagcgacga aaccgcattg gcaatgggtt tgatcgaaaa cctccagcgc
     3841 gaaaacctca accccatcga agaagcacaa ggcttgaaac gccttgccga cgagttcgga
     3901 ctgacccacg aaaccatcgc ccaggccgtc ggtaaaagcc gaagcgcgat ttccaacagc
     3961 ctgcgccttt taagcctgcc cgaacccgtg caggaaatgc tttaccaacg ccgcctcgaa
     4021 atgggacacg cccgcgcatt gctgaccctg cccgtcgtcg aacagctcga gttggcgcaa
     4081 aaggccgtca aaaacggctg gtcggtgcgc gaagtcgagc gccgcagcca agccgccctt
     4141 caaaacaaac gtcccgagcc caaaaagact gccgccgccg acatcggccg cctgaatgat
     4201 ttgctgactg aaaaactggg tgtcaacgcc gaaatcaaaa ccgccaacca taaaaaaggc
     4261 agaatcatcc tgcatttcga cacgcccgaa accttcgacc atatcttgaa gcagttgggc
     4321 atagattacc gaccttaatt ttgcgggata taccgtctga aatatagaga atagctttcc
     4381 agattttaag tgggaaatat aattctattg acattttttc tgcttcacgt aagaatcgtt
     4441 ttcctgtttt catttttaat tttcgaggaa attatgaaca cacgcatcat cgtttcggct
     4501 gcgttcgttg cgttggcatt agcaggttgc ggctcaatca ataatgtaac cgtttccgac
     4561 cagaaacttc aggaacgtgc cgcgtttgcc ttgggcgtca gcccaaatgc cgtaaaaatc
     4621 agcaaccgca gcaatgaagg catacgcatc aactttaccg caactgtggg taagcgcgtg
     4681 agccaatgct atgttaccag tgtaatcagc acaatcggcg ttaccacttc cgatgcaatt
     4741 tgtttgggag gcggaacgca caaaggcaaa agtcaatgca atgctttgct taaagcggca
     4801 ggccgttgct aatcctttat tcggaaaagg tcgtctgaaa atattttcag acgatctttt
     4861 atttattgag caaattcccc aaactgccga caatccgacc gataaactgc tacaatttcg
     4921 cgttgatttt ttattatttc cacgtaaagc aaacaaatca cgtaagaaca ttaaaagtgt
     4981 aaagaaattg cggacaaact ccttaatatc ctgtaattat atgtaatgtg tgttagaatg
     5041 acacctgtcg ccgttattca ggcggcgagc gcggcggatt gggatacgtt gtttcacaaa
     5101 gattaactgt cgcttgacgt aataaggctt ctaaattata ttagccgcgc cccaaatccg
     5161 aggcggaaac attcccttta tgaagcagat tatcatccta caatccgccg tattgtccat
     5221 atgcgccgca gttgcctttg ctgtatgggg ttttgccgga ttcctttcgg cggtcggtgg
     5281 cggtttgtcc tacctgcttc ccacgtttgt tgcagtttta cttttaaaac ttttcagggg
     5341 aaaccctttc ctgcaaagca ggatgttcgt cttcggagag attttaaaag tagtgctgtc
     5401 gctgttgtcc atgctcgccg tatttgctgt atggcatcaa tcgttggtgt tcgccccgtt
     5461 tctgatgggg ctgctcggtg tcagccattt ggttttttta gtattgttga gagtgaaaga
     5521 ttatggcagg tgaaaccatt accgctgccg actacatcaa gcaccacttg cagagcttga
     5581 ccagtttgtc ggatgttact cagggtcagg gactgaaaaa cattgctgat ttttcgttta
     5641 ttaaccttga tgccgtcttt tttgccgtcc tgttgggcgt aatcggcagc ttcctgttgt
     5701 ggcgcggtgc gaaaaaagca acggcaggcg ttcccggacg tttccaggct gccgtggaaa
     5761 tcttgtttga gtttgtggac gatatgtgta agagcatcat tcacaacgaa aagtctagaa
     5821 aagccgtcgc gccgttgggt ctgacgctgt ttgtctggat ttttctgatg aacgcgatgg
     5881 atatgctgcc ggtcgatttg ctgccgatgg tatggcaggg cattaccggc aaccatcacg
     5941 ccctgctgcg cgtcgtaccg actgccgatt tgaacaccac tttggcactc gctgtcggcg
     6001 tgttgctgat ttgtatctat tacaacatca aaatcaaagg attgggtggc tggtttcacg
     6061 agttgttcag cgcgccgttc ggtgcaaaac tcgcacctgc gaactttctg ttgaatttgg
     6121 tcgagtttct ttctaaaacc gtatcccacg gtatgcggtt gttcggcaat atgtatgcag
     6181 gcgagttggt attcttgttg atagccttgc ttggcggtgc ttgggcggct tccggcagcg
     6241 tcgaagtcat ggatccgatt ctgtttgtat tccacattat tgccggtttg gcatgggcga
     6301 ttttccatat tttggtgatt accctgcagg cgtttatttt catggcgttg gcgttcgtct
     6361 atatcggaca ggcacatgat gcgcactgat tttcctaagt agtttgtttt tgtagtttaa
     6421 cctttgtttc tttaaggagt ttaaaatggg tttgattgct atcgcatgtg gtttgatcgt
     6481 tgcattgggt gcattgggtg cctctatcgg tatcgcaatg gtcggttcta aatatttgga
     6541 gtcttctgcc cgtcagcccg aactgatcgg tccgctgcaa accaaactgt tcctgattgc
     6601 cggtttgatt gatgccgcat tcttgattgg tgtcgccatt gcactgctgt tcgccttcgt
     6661 taacccgttt gcaggtgcat aatcaggacg gattcgtccg ttccgtacag gcgcagcctg
     6721 tttgattaac cccagtacga aggttaagta acgtgaatat caatgcaaca ttattcgctc
     6781 aaatcatcgt ctttttcggt ttggtatggt ttaccatgaa attcgtgtgg ccgccgattg
     6841 caaaagcttt ggatgagcgt gccgcaaaag tcgccgaagg cttggctgcc gccgagcgtg
     6901 gtaaaagcga ttttgagcag gctgaaaaaa aggttgcaga actcttggca gaagggcgta
     6961 atcaggtttc cgaaatggtt gccaacgccg aaaaacgtgc cgccaaaatt gtcgaagaag
     7021 ccaaagaaca ggcttcttcc gaggcggcgc gcattgcagc tcaggcaaag gccgatgtgg
     7081 agcaggaatt gttccgcgca cgcgaatccc tgcgcgagca ggttgccgtg ttggctgtca
     7141 aaggtgccga atctattttg cgcagcgaag tcgatgcttc caaacacgca aaactgctcg
     7201 ataccctgaa acaggagctg taatcttatg gcagagttcg caacgattgc cagaccttat
     7261 gcaaaggcat tgttcggtct ggctcaggaa aaaaaccaaa ttgagtcttg gttgggcgga
     7321 ctggaaaaac ttgcggcggt tgttcaggaa gggaaggtgg cttcattgat tgaccgtcct
     7381 gaaacgaatg cttcagaaaa agcagatatc ctcatcgatt tggtcggttt gaaagacaag
     7441 gagttgaaaa actttgttat cgtcttggcc gggcagaaac gtttgtcgat attgccggaa
     7501 gtatatgctc aatatcaaga cttgacctta tcattcaacc atatcaaatc tgccatcatt
     7561 tacagtgcct atccgttgac cgacaaacag gtcggcgagt tggcgcaaat gctgaataag
     7621 cgtttcgaca gcgagctgaa aatctctgtc gaaatcgaac cggagctgat tggcggcata
     7681 aaagttgaag tgggtgatca ggttttggat ttgtctgtac aaggcaaatt gagtgccttg
     7741 tacacgacta tgacgaatta ggagagtttt catgcagctt aatcctgctg aaattagcga
     7801 tttgattaaa gccaagatcg aaaatctgtc tgtaaatgcc gaagtgcgta cccgtggtac
     7861 ggtgatttcg gtaactgacg gtatcgttcg catccatggt ttgtcagatg caatgcaagg
     7921 tgagatgctc gaattcccgg gtaacacttt cggcttggcg atgaacctgg agcgcgactc
     7981 cgtcggcgcc gtagtgttgg gcgagtacga acatattaaa gaaggcgaca cggttacctg
     8041 taccggtcgt atcttggaag tgccggtcgg acgcgaactg gtcggacgcg tcgttgatgc
     8101 attgggtcgg cctatcgacg gcaaaggccc gattaataca actttgaccg cccctatcga
     8161 aaaaatcgca ccgggcgtga ttgcgcgcaa atcggttgac cagccgatgc aaaccggtct
     8221 gaaggcgatt gactctatgg ttcctgtcgg tcgcggtcag cgtgagttga tcattggtga
     8281 ccgtcaaacc ggtaaaactg ccgtagcact ggatgccatc gtcaaccaaa aaggtacggg
     8341 tgttatctgt atctatgtcg ctatcggtca aaaagcatct tctattgcca acgtggtccg
     8401 caaattggaa gagcatggcg cgatggaaca cacgattgtg gttgctgcaa ctgcttctga
     8461 agccgctgca ctgcaataca tcgcacctta ctccggttgt acgatgggtg aattcttccg
     8521 cgaccgcggc gaagatgcct tgattgttta tgacgatttg tccaaacagg ctgtggctta
     8581 ccgtcaaatt tccctgcttt tgcgccgtcc gcccggccgc gaagcctatc ccggcgatgt
     8641 gttctacctg cactcccgtc tgttggaacg tgcggcacgt gtcaatgaac acgaagtgga
     8701 gaaattgacc aacggcgaag taaaaggcaa aaccggttct ctgactgctt tgccgattat
     8761 cgaaacccaa gcgggcgacg tatctgcttt cgttccgact aacgtcattt cgattaccga
     8821 cggtcagatt ttcttggaaa ccgacctctt caacgccggt atccgtcctg caatcaatgc
     8881 cggtatttcc gtatcccgcg taggcggtgc tgcacaaacc aaagtgatta aaaagctggg
     8941 tggcggtatc cgtttggcgt tggcgcaata tcgtgaattg gcggcgttct cgcaatttgc
     9001 atccgatttg gatgaagcta cgcgcaaaca attggagcat ggcgaagtcg taaccgaact
     9061 gatgaaacag aaacagttca gtacgttgaa tacggctgaa atggctttga ccctttgggc
     9121 aatcaacaac ggttcgtatt ctgatgttcc ggttgccaaa gctctggctt ttgaatctga
     9181 atttttgagc tttgtccgta cccaacatcc ggaagttttg gaagccgtca atgcttcagg
     9241 tgcaatgtcc gacgagagcg agaaaacgct tgaagcagcc atgaaatcct tcaaatcttc
     9301 ttacgcctat caggcataag gcttgaagtg aaaggagtct gaaatggcag taggaaaaga
     9361 gattctcacc aaaatccgca gtgttcagaa tacccaaaag atcactaaag cgatgcagat
     9421 ggtgtcaacc tctaaaatgc ggaagactca ggaacggatg cgtttggcgc gtccgtatgc
     9481 cgaaaaagtg cgtatggtga tgagccatct tgcgcaaacc aataccgatc atggtattcc
     9541 gttactggaa tctcatcggg aaatcagacg tgtcggtttt attttgatta cgtctgataa
     9601 gggtttgtgt ggcggtttga acgccaacgt gctgaaaaag tttttggcac aagttcaaga
     9661 gtatcggaat caaggtattg aagaggaaat cgtatgcctt ggcagtaaag gtctgatggc
     9721 gtgtcagagc attggtctga atgtggttgc cagtgccgta aatttgggcg ataccccaaa
     9781 aatggaaatg ctgctcggac ctttgacaga actcttccaa cggtatgaga aacatgaaat
     9841 tgacagaatc catctggtgt attcgggttt tgtcaatacc atgcgtcaag aaccgagaat
     9901 ggaagtattg ctgcctatcg gtgagaacgt gattggcgat tcagctccca aatcaccgtt
     9961 cagctgggaa taccgctacg aaccgactgc acttgcagtg ttggaatatc tggttcgccg
    10021 ctatttagag tctgtggttt atcaggcgtt gagcgacaat atggcatccg aacaggcagc
    10081 ccgcatggtt gccatgaaag ctgcaacaga caatgcaggc aatgccatca aagagttgcg
    10141 tttggtatat aacaaatcgc gtcaagctgc gattaccacg gaattgtcag aaattgtagc
    10201 aggtgcggcg gctgtctgat gccgtctgaa tcctgtacgg aaattaggat acgataatga
    10261 gccaaggcaa aatcgtacaa attatcggtg cggttgttga cgtggaattt ccacgcgaca
    10321 tgattccgcg cgtttacgac gctttgaaat tagacgaaaa cggtctgact ttggaagtcc
    10381 aacagctttt gggcgacggc gtagtccgtg ccattgcgat gggcagctcg gacggtttga
    10441 aacgcggcat gactgtgagc aataccggtg cgcccattac tgtgccggta ggtaaaggta
    10501 cgttgggacg cattgtcgat gtattgggaa cgcctgttga cgaagcaggt ccgatcgata
    10561 ccgacaagag ccgtgccatc caccaagctg cccctaagtt tgacgaactg tcttccacaa
    10621 ccgaattgct cgaaacgggc attaaagtga ttgacttgct gtgtccgttt gccaaaggcg
    10681 gtaaagtagg tctgttcggc ggtgccggtg tgggtaaaac cgtgaacatg atggaattga
    10741 tcaacaacat cgccaaagcg cacagcggct tgtccgtgtt cgcaggcgtg ggtgagcgta
    10801 cccgcgaagg taacgacttc taccacgaga tgaaagattc caacgtattg gataaagtgg
    10861 caatggttta cggtcagatg aacgaacctc cgggcaaccg tttgcgcgtc gcattgaccg
    10921 gtttgaccat ggcggaatac ttccgtgacg aaaaagacga aaacggcaaa ggccgcgacg
    10981 tattgttctt cgtggacaac atctaccgtt acaccctggc tggtaccgaa gtatccgcat
    11041 tgttgggtcg tatgccgtct gcagtgggct accaaccgac attggcagaa gaaatgggtc
    11101 gtttgcagga gcgtattacc tctacccaaa ccggttctat tacttccatc caagccgtat
    11161 atgtacctgc ggacgacttg accgacccgt ctccggcaac aacgttcgcc cacttggacg
    11221 caaccgtcgt attgagccgc gatattgcct ctttgggtat ttacccggca gtcgatccgc
    11281 ttgattctac ttcgcgccaa ctggatccga tggtattggg tcaagagcac tacgacgtag
    11341 cgcgcggcgt acagtccacc ctgcagaaat acaaagaatt gcgcgacatc atcgccatct
    11401 tgggtatgga cgaattgtct gacgaagaca aactgaccgt aatgcgtgcg cgtaaaatcc
    11461 aacgcttcct gtcccaaccg ttccacgttg ccgaagtgtt tacaggttct ccgggcaaat
    11521 atgtcgccct gcgcgatacc attgccggct tcaaagccat cttgaacggc gaatacgacc
    11581 atctgcccga gcaggcattc tatatggtcg gcagcatcga agaagcggtt gagaaagcga
    11641 aaaccttaaa ctgaggaggt cggcatgagc atcatggaag ttgaggtggt aagtagcgag
    11701 cagaaaatct attcaggcga ggcaacattt atcgttgttc cgactgtaca gggcgaactc
    11761 ggtatttatc cgcgacacga gccgattatg agtttggtgc ggccgggggc tttgcgtttg
    11821 accgttccgg gcgaggataa agaggttttg gttgctgttt ccggcggtgt tttggaagta
    11881 cagcctgata aagtaactgt cttggcggat gttgccgtcc gcagtgcgga gatggatcag
    11941 gcacgtgcgg aagaggcgaa aaaagccgca gaagcgggca tttcccaagc taaagacgat
    12001 aaggctttgg cggaggcgca taaagcattg gctgctgcga ttgcacagct caaaactttg
    12061 gactatatcc gttcgcacaa gaaataaact tgtttggttt ggaaaagcac gaccgtttgg
    12121 tcgtgctttt tatttttcca agttttgaaa atatagtgga ttaacaaaaa tca
//
LOCUS       DBBZXW010000057        12076 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.057, whole genome shotgun sequence.
ACCESSION   DBBZXW010000057 DBBZXW010000000
VERSION     DBBZXW010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12076
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.057"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(332..1108)
                     /gene="lpxA"
                     /locus_tag="ACJJD2_001371"
     CDS             complement(332..1108)
                     /gene="lpxA"
                     /locus_tag="ACJJD2_001371"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HGG7579899.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVIGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCH
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFAQSARGIIR"
     gene            complement(1195..1644)
                     /gene="fabZ"
                     /locus_tag="ACJJD2_001372"
     CDS             complement(1195..1644)
                     /gene="fabZ"
                     /locus_tag="ACJJD2_001372"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HGG7579900.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(1678..2724)
                     /gene="lpxD"
                     /locus_tag="ACJJD2_001373"
     CDS             complement(1678..2724)
                     /gene="lpxD"
                     /locus_tag="ACJJD2_001373"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HGG7579901.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANVYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGNDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            complement(2757..3257)
                     /locus_tag="ACJJD2_001374"
     CDS             complement(2757..3257)
                     /locus_tag="ACJJD2_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HGG7579902.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(3323..5716)
                     /gene="bamA"
                     /locus_tag="ACJJD2_001375"
     CDS             complement(3323..5716)
                     /gene="bamA"
                     /locus_tag="ACJJD2_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HGG7579903.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMFGGEVGIAGGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(5773..7113)
                     /gene="rseP"
                     /locus_tag="ACJJD2_001376"
     CDS             complement(5773..7113)
                     /gene="rseP"
                     /locus_tag="ACJJD2_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HGG7579904.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPITSWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(7148..8383)
                     /gene="ispC"
                     /locus_tag="ACJJD2_001377"
     CDS             complement(7148..8383)
                     /gene="ispC"
                     /locus_tag="ACJJD2_001377"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HGG7579905.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAVQCRTFRPEYAVVADAEHAARLEALLKGDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAIFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(8388..9185)
                     /locus_tag="ACJJD2_001378"
     CDS             complement(8388..9185)
                     /locus_tag="ACJJD2_001378"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HGG7579906.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMSGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVIGLVWVADVCAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(9188..9934)
                     /locus_tag="ACJJD2_001379"
     CDS             complement(9188..9934)
                     /locus_tag="ACJJD2_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HGG7579907.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(9990..10547)
                     /gene="frr"
                     /locus_tag="ACJJD2_001380"
     CDS             complement(9990..10547)
                     /gene="frr"
                     /locus_tag="ACJJD2_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HGG7579908.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDACTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(10728..11855)
                     /locus_tag="ACJJD2_001381"
     CDS             complement(10728..11855)
                     /locus_tag="ACJJD2_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HGG7579909.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(11931..12006)
                     /locus_tag="ACJJD2_001382"
     tRNA            complement(11931..12006)
                     /locus_tag="ACJJD2_001382"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11971..11973),aa:Thr,seq:cgt)
BASE COUNT         2276 a         3083 c         3760 g         2957 t
ORIGIN      
        1 tttaaaacac cacttttgta gtgtccagta atttcagcac agaatattca ataagacaat
       61 atgttctttt gaaaaatact tttggttttt tcgccgaaag caggtcggtt caagctgcgg
      121 aaattgtttg caattcttta aaagcagcgg cggaggtcac aatgaaatgt ccgaatgggg
      181 atgtggtcgg cggcagaaat catcaatgct gccgactgcc atacttctga aatctacaaa
      241 atgatgcatc gatcaaacaa tataccgctt taaaaaaacc gatgccgtct gaaacgcttt
      301 cggggtttca gacggcatca aaagggtacg gtcagcggat gatgccgcgc gccgattgtg
      361 cgaaaaagtc tcggaatacg gcaagctcgg cttgggtttc ggcgcggcgg aggatgtctg
      421 ccttggcctc ttcaaacgga atgccgcgat ggtagagggt tttgtacacg tctttgacgg
      481 cggaaatctg ttctgcggta aaaccgttgc ggcgcatgcc ttcgctgttg agccccgccg
      541 gttcggcgcg gtagcccgat gccataaagt agggcggtac gtctttgtgt acgcctgcgg
      601 cgaaggcggt catggcgtag tcgccgatgt ggcagaattg gaaaaccagc gtgtagccgc
      661 ccaaaacgac gtagtcgccg atggtaacgt gtccggcaag cgaggcgttg ttggcgaaga
      721 tggtgtggtt gccgatgacg cagtcgtgcg cgaggtggca gtacgccata atccagttgt
      781 cgtcgccgat acgggtttcg ccgatgccgg ttaccgtgcc taaattaaag gtggtgaatt
      841 cgcggatggt gttgccgttg ccgataatca gcttggtcgg ctcgtcgcgg tattttttgt
      901 cctgcgggat ttcgccgagg ctggcaaatt ggaaaatgcg gttgttttcg ccgatgctgg
      961 tgtggccgtt gatgacggcg tgcggaccga tttcggtatt cgcgccgatt tggacgttgg
     1021 ggccgataac ggtgtacgcg ccgactttga cgccggagtc gagttcggct ttggggtcga
     1081 tgacggcggt cgggtggatg agggtcatgt ttttcctttc ctgtcgtgtt gccgcgaaga
     1141 tgcgcgacgg caacaggttg tctgaaaact ttcagacgac ctttttctga acactcaaac
     1201 tacgcgtttg gcacacatga tgatggcttc gacggcaact tgcccgtcca ctttggcgac
     1261 ggcgttgaat ttgccgatgc cgcgccgact ggtcagcagc tcgacttcaa agacgagttg
     1321 gtcgccgggg atgacttggc gtttgaaacg ggcttcgtct atgccggcga agaagaagaa
     1381 ttcgttttct ttgcgcccgc cttcgctcaa aatcgccaac gtgccgcacg cctgcgccat
     1441 cgcttcgatg atgagtacgc cgggcatcac gggcaggtcg ggaaaatggc cttggaactg
     1501 gggttcgttt atggtgacgt ttttaatcgc ggtcagggtt ttcatcggct cgaaggcggt
     1561 gatgcggtcg agctggagaa acggatagcg gtgggggatg agtttttgga tgtctttggc
     1621 ttcgatgggg agttgtacgt ccatgtctgt cgtattcctt gaataaagtc ggtttggtta
     1681 tttgctgtct tgaccggcat ctgaaagctg ctgctccagt gttttgagcc gtttgttcat
     1741 ttcgcttaag cggtggatgt aaacagcgtt gcgcgcccat tctttatggg tggacatcgg
     1801 gaagatgccg gcgaggtgtt tgccgctttc ggtaatgctg tgggtgacgg acgtgccgcc
     1861 gccgatggtg gttttgtcgg cgatttcgat gtgtccgacc gtaccgacgc cgccgccgat
     1921 gatgcagtag ctgcctatgg ttacgctgcc tgagatgccg gttttggcgg cgatgacggt
     1981 gtgcgaaccg attttgcagt tgtgtccgat ttggacttgg ttgtcgattt tggtgccgtt
     2041 gccgacggtg gtgtcgctca tcgcgccgcg gtcgatgttg gtgttcgagc cgatttctac
     2101 gtcgttgccc agcgttaccg cgccggtttg cgggatttta aaccatgaat cgccggcaaa
     2161 agcgagtccg aaaccgtccg cgccgatgac cgcgccgctg tggatttcga cgcgtctgcc
     2221 cagtgtgcag ccgtaataaa cgacggcgtt gggatgcagg acgacttcgt cgcccagttt
     2281 gcaatcgtgt tggacgacgg cgtttgccaa gatgcggcag ccttcgccga gcacggtgtt
     2341 tgcgccgatg tagacgttcg cgccgatttc gcagctggcg ggaacggtcg cgcccggttc
     2401 gacgacggcg gtcggatgga tgccgccgcg cgctttgacg acgggtgaaa acaggcgggc
     2461 gactttggcg aaatagagat aggggtcgtc ggcgacaatc aggttgcgcc cttcaaatcc
     2521 gtctgccgct ttggcggaaa cgatgaccgc gcccgcgctg ctgtcgtgga cttcggcttt
     2581 gtatttcgga ttggcaagga agctgatgtg ttccgcctgc gcgtctgcga gcgggcgcac
     2641 ggcggtaacg gaaatgtcct cgccgcgcca ttcgccgccg agccgcgcgg tgatttggga
     2701 cagggtgtag gtggccggaa tcatggtttt cctgttcggt atgccgtctg aaagggtcag
     2761 cgggcgttca tttctttaat gacgctgtcg gtaacgtcgt attgggtgtt gacgtaaatc
     2821 acgttctgca aaatgacatc gtaaccttcc tgtttggcga ttttgacgat gacgcggttg
     2881 gcgttttgct ggagggaggc aaactcttcg ttgcggcgga ggttgtagtc ttcttcaaac
     2941 tgcgcctgtt ttttgcggaa cgctgcgacc agcccgcgcc atttttcttc ggcttgcgcc
     3001 ttttttgcgt ttctgagttt gccttcggca agctgccttt ccaaatccag accttcgcgt
     3061 tgcagttttt gcaattcgtc ctgacgggcg gaaaattcgc tgtccagcgt tttttgaatc
     3121 ttgcgcgcct gcttggattc gaggtagatg cgctcggtgt tgataaagcc gattttttgg
     3181 aaggtgtcgg cgtgcgcgcc tgcggtgcag cacaaaccga tcagagccgc ggcaaacgcg
     3241 cgggtcaaac gggtcatggt aaaactcctt cgaatgttgc cgcgaaatgc cgtctgaagg
     3301 gcttcagacg gcatttgcgg gattagaacg tcgtgccgag ttggaattgg aagcgttgga
     3361 tttcgtcttc cggttttttc ttcagcgggt aggcgtagct gaatttcatc gggcctaaag
     3421 gcgagagcca ggtaaccgcg ccgccggcgg aatagcgcaa ttcgttggta aaggtggatt
     3481 tatgggtatt gccggcgccg taaatgtttt gaaccctgcc gccggtcgcg gaactgctgt
     3541 tgtcgtcgta ggttttgccg tcccacacgc tgcctgcgtc ggcaaacagg ctcaggcgga
     3601 cggtgcgcgc gtctttcgcg ccgggcatcg ggaagagcag ctcggcggag acgttggctt
     3661 ttttgttgcc gccgtagctg attttttcgc cgtattcgtc atacactttc ggaccgagcg
     3721 tgccgctttc gtatccgcgc accgaaccca ggccgccgcc gtagaagttt tcaaagaagg
     3781 ggatttcttt ggttttgccg tagccgcccg caatgccgac ttcgccgccg aacatcagcg
     3841 tgaaggtttt gcttaagggg aagaaccagg tttggttgtg ggtggcggag tagtattgca
     3901 gtttgctgcc gggcagggcg atttcagcgt tcacgcccgt caggtagccg cgcgtcggcc
     3961 ataacgcgct gtcggttttg ttgcgccccc agccgacggt acctttgtac agccagcctt
     4021 tgaagctgcc gtctgtgccg tcggttttgc cgtatttctt gataaagtcg gcatagtgtt
     4081 tgggcgcttt gttgtaggtg ttgacggtca ggtgttctgc caccaaaccg aaattcacgc
     4141 ggtcgtattc ggtaacaggc acgctcatgc ggatgcctgc gcctgccgtg gtggttttat
     4201 attgtttgat gctggtcgat gctttgcgcg ggtcgaaggc ttttccgtaa acatcgtagc
     4261 ctaggctgac cccgtctgcc gtgaagtacg ggtcggtaaa cgacagcgag ccgttgagcg
     4321 tggttttgct tcgtgaggcg cgcagggcgg ccgacttgcc cgtaccgaac aggttgtctt
     4381 gggaaacgcc tgcggacatg accaggccgg tatcctgtac ccagcccgcg ctcaagtcga
     4441 gcgagccggt ggaacgttcg gtcaggctca tgttcaaatc gactttgtcg ggtgtgccgg
     4501 caagcgggac ggcatcaaac tgtacgttgt cgaagtagcc caaaagctcg acgcgctctt
     4561 tggagcgttg cagcttggag gtgtcgtaag gcgcggattc catttggcgc aattcgcggc
     4621 gcacgacttc gtcgcgggtt ttgttgttgc cggtgatgtg gatttcgttg acgtagattt
     4681 tccggcccgg ttcgatgtgc aggacgaaat cgacggtttt ggtttcggcg tttggcagcg
     4741 gctgtacgct gatttcgctg tatgcgtagc ctgccgagcc catgcggttc tgaatctcac
     4801 ccaaaacggc ggtcatctgc tggcgttcgt accatttgcc gggcttcatg gtcagcagtt
     4861 tttccagttc ggctttgggg acttcgttgg tgtcgccttc gatggagact ttgccccaac
     4921 ggaaacgtcc gccttcgtgg acggtgattt tgatggtctg cttggttttg tcttcgttgg
     4981 tttggatgtc ggtatcgagg atgcggaaat cgaagtagcc gttgttctgg tagaagtcgg
     5041 ttactttttc catgtcttgg gcaaatttct gctcgttgaa ttggttgctt cgtgtcagcc
     5101 atgtccaaat gccgccttcg gtcagcgaca tctgccgcat cagtttgcgg tcggaataga
     5161 cttggttgcc ttcaaattcg atgtcggtga ttttggcgga tttgccctcg tcaatcgtga
     5221 tgtcgatgtc gacgcggttg cgggcgagtt tggttacttt gggcgtgatt tggatattga
     5281 gtttgccgcg cccgaggtat tcttctttca ggccggcgac tgcctgattg agtgtcgcct
     5341 gattaaagta ttgcgactgc gccagcccga acgattcgag gtttttctta atggcgtcgt
     5401 tttgcagcat ttttgcgccg gtgatgttga gcgagccgat ggtggggcgt tcgataacgg
     5461 tcagcaggag ctgcccgtcc gcagtttcga cgcgtacgtc gtcaaagaaa ccggtggcgt
     5521 acaggctttt gatgatggca ctgccgtgtg tgtcgttgta ggtgtcgccg actttgacgg
     5581 gcaggtagtt gaatacggta ctcggctcgg tacgctgcaa gccttcgacg cggatgtctt
     5641 ggatggtgaa gtcggcaagt gccaaaggcg atatgcccaa gaccatcagt gcggaagcaa
     5701 tctgtttcag tttcattgtc agttccttgt ggtgcggaat gcggtttcag acggcattcc
     5761 gaaacgtaaa atctaaccga gcagccgggt aacgtcgttg aagaaggcga ccgccatcat
     5821 cagcatcatg agggcaagcc cgaagcgcaa accgatgttt tggacgcgtt cgcccaaagg
     5881 tttgccgcgt atccattcgg cagtataaaa cacgaggtgg ccgccgtcca aaacggggac
     5941 gggcagtagg ttcagcacgc cgaggctgat gctgaccagt gccaaaaatt ccaaataact
     6001 ttgcaagccg agttcggcgg actgtccggc aatgtcggca atggtcagcg gcccggaaat
     6061 atggctgacg gaggcgttgc cgctgattag tttgccgaaa aatttgaggg ttgtccacga
     6121 gtgggaaacg gttttttccc agcccatgcc gaatgcgcgg acaacagacg gacggtagct
     6181 gcggcggatt tgcgcgtccc acgccctgtc cggctgcgga cggaggccga cgcgcccgat
     6241 cagggtgtgg tcgggctgtt cgacagtatc ggggcggatg tcggcggtat gggtttgtcc
     6301 ggcgcgttcg tagttcaggg tgattttttt gccggggctt tggcgggtca ggtttgccca
     6361 ttcttgccat gaggtaatgg gtttgccgtc ggcggcagtc agcctgtcgc ccggtttcag
     6421 gcctgctttt tcggcggggc tgcctttttc cacgccaccg gcaacggttg tgattttaaa
     6481 gggcatcagt ccgatgtagc cttggttttt tgcgatttta ccggcttccg gcgtgcctgc
     6541 ggcatcgatg gtgcggacgg tttgcgcgcc tgatgccgtc tgaacgccga cggcgacttt
     6601 gccggcttcg aggttgagga cgatttcggt ttgcgcgctg ccccaatctg caacgggtgt
     6661 gccgttgacg gattgtattt tgtcgccgct ttggaagccg gcgcgggcgg caatggtgtc
     6721 gggttcgact gtgccgacat aggggcgcag ttcggttacg ccgaaggaaa agctcagtcc
     6781 gtacagcaaa accgccagtg cgagattggt cagcgggccg gcggcgacga tggcgatgcg
     6841 tttggcgggg tgttgtttgt caaaagcgta gggtaaatcg gcttctgata cttcgccttc
     6901 gcgcgtatcg accattttga cgtaaccgcc caacggaatc ggggcgaggc accattcggt
     6961 gtcgccgcgc tttcgggtga aaaacggttt gccgaagccg acggaaaagc gtacgacttt
     7021 gacgccgcac aatctggcaa cgatgtagtg tccgaactcg tgcaggctga ccaaaatcag
     7081 gatggcgaag ataaaagcta gaagggtgtg caaatggttt tcctttgata acggtgttca
     7141 gacggcatca gcgcagtgtg ccgataaatg cccgcgcttg tgcgcgtgtc cgggcatctt
     7201 gcgccaagag cccccctatg tcgcctatgc cgtctgaaaa gtcttgtgaa agacaatggg
     7261 cgacggtttt ggcaatgtcg gtaaacttaa tctgtccgtc caaaaaggcg gcgacggcgg
     7321 cttcgttggc ggcgttcaat acgcagggcg cggctccgcc tgcgttcatg gcttcatagg
     7381 cgagcttcag gcaggggaag cggtcaaagt cgggcttttg gaaggtcagc gcggacaatg
     7441 cgtcgaaatc caggtcgccg acacccgaat cgatgcgctc gggcaaaccc aaacaataag
     7501 caatgggcgt acgcatatcg ggattgccca gttgcgccaa cacggagccg tcgcggtagc
     7561 gcaccatgct gtgtatcacg gattgcggat ggatgacgac ttcgagcttg tcaggcggac
     7621 agttgaacag ccaatgcgct tcaatcagct ccaaaccttt gttcatcatg gtggcggaat
     7681 cgacggagat tttgcgcccc atgctccaat tggggtgttt gaccgcttgg gcgggcgtaa
     7741 tgctgtcgaa cgtgtttaaa tcggcggtca gaaacgggcc gccggaagcg gtcaggataa
     7801 tcgaagcgat gccgtgttcg ttcagacggc cggcgtaatc gcgcggcaaa acttggaaaa
     7861 tggcgttgtg ttcgctgtcg acgggcagca ctgccgcgcc gtttgcacgg gcggtttcca
     7921 taaacaacgc gccggaaacc accagcgtct ctttgttcgc cagataaatg gttttgcctt
     7981 tttgcgccgc tgcgagcgcg gaaggcagcc ccaccgcccc gacgatggcg cacatgacac
     8041 cgctgacttc gtcggcagag gcaacgtcaa ccaatgcctg cgcgccgtgt aaaacctgcg
     8101 tcgccgtgcc gtcgcctttc aacaaagctt caagccgggc ggcgtgttcg gcatcggcaa
     8161 cgacggcata ttcggggcgg aacgtccggc attgcaccgc cagtttctcg acctgcttat
     8221 gccctgccag cgcgaatacg cggaattttt cggggtggcg ggagacaacg tccagcgtgc
     8281 tttcgcctat gctgccggta ctgcctaata tggtcaggac ttgtggtgtc ataatgggga
     8341 taactttata ccggatgccg tctgaagcgt tttcagacgg catagaatca atttaaaacc
     8401 gacatcatcg ccgcatagac gctgataacg gcaatcaggc tgtcggtacg gtcgaacacg
     8461 ccgccgtgtc cgggcagcag gttgctgctg tctttgatgc ctgccgcgcg cttgagccag
     8521 ctttccaaaa ggtcgccgca tacgctgaca acggtcaaca ccaaaccgat taacacggta
     8581 tcgaaccagc ctgtatcgaa tgccagccag ccggcacttc gtacggcggt catgtacacg
     8641 gccacgcaaa ccgcgccgcc gattgcgcct tcccagcttt tgccagggct gattgccggt
     8701 gcgattttgt gtttaccgaa cgccttgccg ctgaaatacg cgcaaacgtc ggcaacccag
     8761 accagaccta tcacggcgag cagcggcagg gcatcatcgg gatgcgggcg cagggatacg
     8821 agcgcgaacc aaaacggcat gaccagaagc caaccgacgg cataaacctg ccaaccgccg
     8881 ttgagcctcc atttgaatct caaccataaa ggcatgatgg cgagccaaaa tgccaaaaca
     8941 acataccaaa ccaaattagg cagcatccag ccgcccgcat aggcaaccac gccgaaaacc
     9001 aaggttgcgg cgaggtaatg gttggtttta attttgcaca aaccgctcat acgggcatat
     9061 tcccacaagg caatcagggc aatcagtccg caaaatgcag cccacaacca ttgcggcgcg
     9121 taaaacagca tgcccagcat cagcggcagc agccacatag cagttatcac ccgttgtttc
     9181 agcatattca gttcctttgc tgttcgatag gcagttgctc ggaggtgcgt ccgaaccgcc
     9241 gttcgcgttt ttggaacgaa gcgacggcat cgtccaaagc cttgccgtca aaatcgggcc
     9301 acaaaatatc ggtgaaatac agttctgcat atgccatctg ccagagcagg aaattgctga
     9361 tgcgcgtttc gccgccggtg cggatgaaca aatccggttc cggtgcatcg cccagcatca
     9421 agtgtttcgc cagcgtgtct tccgtaatct cggatacgcc ttcggcaatc agtttgtttg
     9481 ccgcctgcaa aatatcccaa cgtccgccgt aatcggcggc aatgctcagg gtcaggccgg
     9541 tattgtttgc cgtcaaggct tccgcctctt cgatgccttg cagaatctgc cgattaaagc
     9601 gttcgcggct gcccagtatt tttaggcgca tattgttttc gtgcagacgg cgtacctgtt
     9661 tttgcaaagc ctgtaaaaac agccccatca ggaacgaaac ttcgtcttcg gggcggcgcc
     9721 agttttcggt tgaaaaggca aacacggtca gatattgcac acccagtttg gcgcaatgct
     9781 tcaccatatt ttccaatgcg tccaaaccgc gtttgtgtcc cattatgcgc gggaggaaac
     9841 gttttttcgc ccaacggccg ttgccgtcca taatcacggc gatatgcttg ggaatggcgg
     9901 tgtgttccaa aacggcctgc gtgctgcttt tcatgtctgc ctttcgcggt tcggcattca
     9961 aatgccgtct gaacgccgaa ccgtgcaggt taaattgcca tcaaatcttc ttctttggca
    10021 gtcaggagtt tgtcggcttc ggtaatgtat ttgtcggtca gtttttgaac cgcttcttcg
    10081 ccgcgacgtg cctcgtcttc ggaaatttct ttgtctttga ggagtttttt gatgtggtcg
    10141 ttggcatcgc ggcgcacgtt gcggatagag acgcggcctt cttccgcttc gccgcgtacg
    10201 actttaatca ggtctttgcg gcgttcctcg gtcagcatgg gcatcggcac gcggatcagg
    10261 tcgccgacag ctgccgggtt cagccccaag tttgaatcgc ggatggcttt ctcgactttg
    10321 gccgccatat tgccctcaaa cggtttcacg ccgatggtgc acgcgtccag aagcgttacg
    10381 ttggcaactt ggctgacggg gaccatgctg ccccagtatt cgacttccac ttggtcgagc
    10441 aggccggtat gcgcgcggcc ggtacgcact ttcgccagat tttctttcag tacttcgacc
    10501 gaacgctgca ttttgccttc ggctgttttt tgaatatcgt tgatcatatt gttctttcgg
    10561 tgggataagg tgggcgggca gccgtctgaa acgcgcttca aacctttcag acggcatgaa
    10621 aactgttaac tgcgaatagt accgttattc gggcatgacg acaaggcagg aggattggag
    10681 atgccgtctg aagcggcagg cgtttcagac ggcatcgtgt ccgaccgtca gccgtgttcc
    10741 cgtgtttcaa gcaggctttg gcgcaggtgt tggcgttcgt gggcatccag ccatttgcgg
    10801 cgggtgcgtt gcagcaggat gacgagggcg gaaatttcct gacgcatatt ggtgctgagc
    10861 cagaggaagc cctgccattg gtagtggagg tgttcggcga gggcttccag ttcggggttg
    10921 atggcggtgt cgatgcggat gcggcgggcg tgtctgccgt tgataagggc gacggtttgt
    10981 tgcaggtcgg tttggagcag tgtgaagtgg cggtcgagca gccggatttc gctgccgttg
    11041 agtttgggag attgcagctt ggcggcagtg gtcaggagca gctcggtggt gttgacaatt
    11101 ttacggtggg cgtgctgcat ggcttccatc atggcggggc tgatgcggct ttcgcccgat
    11161 gtggcggcga ggtggctgcg gcttttgacc atgcgtgcgt tgatttggcg cattttaacc
    11221 atattctgct ccaaacgttc gcgcgtcata cgcctgccgt tgctgatttc ggcaatcatt
    11281 ttgctgcagt cggtcaggtt gtcggcaagc atgaaacgcc acatcagtgt ggatttcagc
    11341 ggcagcagtt tggcggcggc aatggcgatg gccgcgccga tgaggacgtt catggcgcgc
    11401 atcaggccgc tgtcgaacca ttcgctgccg ttgtcgccga tgagcatgca catcgtcagc
    11461 cccgccagca tagggacgta gccgtttttg ccgaccgccg cccagccggc cagtgcgctt
    11521 gccgtgccga cggtgaggta gaagaggagg ttgccgtgga aataatgctg gttcagccat
    11581 aaaacgccca aacccgcgcc cagcccgatg accgtgccga gcatacgttc caccgccttg
    11641 gagtaaatcg ccccttgaaa ctggagcatg ccgaggacga cgaagacggt catccctatc
    11701 cactcgccgt gttggaggtg gagcagccgg gcggaggcgg tggcgaacag gacggccccg
    11761 ccgagccgga cggcgtggat gaggcggcgg tagcggtagc gttcgtagga gttgagccag
    11821 cggctgacga ggcggttgcg ttgcgaggtg ttcatatcgg ttgtgccgtc tgaagcggaa
    11881 atgtgaaaaa gcacaggctt cccgaggaag ggagggtctg tgcttggtat tggtgccgga
    11941 gaagggaatc gaacccccga ccttcgcgtt acgaatgcgc tgctctaccg actgagctac
    12001 accggcgttt tttcgtcatg atatatatga acggttgttt gtgcaacttt tcgggcgggc
    12061 ggcaaggcag tgcgcg
//
LOCUS       DBBZXW010000058        11652 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.058, whole genome shotgun sequence.
ACCESSION   DBBZXW010000058 DBBZXW010000000
VERSION     DBBZXW010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.058"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(106..198)
                     /locus_tag="ACJJD2_001383"
     tRNA            complement(106..198)
                     /locus_tag="ACJJD2_001383"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(162..164),aa:Ser,seq:gct)
     gene            complement(355..555)
                     /locus_tag="ACJJD2_001384"
                     /pseudo
     CDS             complement(355..555)
                     /locus_tag="ACJJD2_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            complement(657..974)
                     /locus_tag="ACJJD2_001385"
                     /pseudo
     CDS             complement(657..974)
                     /locus_tag="ACJJD2_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            complement(997..1758)
                     /gene="kdsB"
                     /locus_tag="ACJJD2_001386"
     CDS             complement(997..1758)
                     /gene="kdsB"
                     /locus_tag="ACJJD2_001386"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HGG7579910.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMRVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            complement(1755..1937)
                     /locus_tag="ACJJD2_001387"
     CDS             complement(1755..1937)
                     /locus_tag="ACJJD2_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HGG7579911.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARPLGEEELEA"
     gene            complement(2006..2587)
                     /locus_tag="ACJJD2_001388"
     CDS             complement(2006..2587)
                     /locus_tag="ACJJD2_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HGG7579912.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            complement(2793..3827)
                     /gene="lpxK"
                     /locus_tag="ACJJD2_001389"
     CDS             complement(2793..3827)
                     /gene="lpxK"
                     /locus_tag="ACJJD2_001389"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HGG7579913.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIAAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAASRAEDAGDEPLLLFSKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGNLREPLSRLDSVDTVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            complement(3958..4137)
                     /locus_tag="ACJJD2_001390"
     CDS             complement(3958..4137)
                     /locus_tag="ACJJD2_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579914.1"
                     /translation="MKEMETVRYHIGDMPETSKQTAPVMTTGQWVLTMIVFMIPLVNF
                     CLGVRQRQPEPRQFL"
     gene            complement(4220..5500)
                     /locus_tag="ACJJD2_001391"
     CDS             complement(4220..5500)
                     /locus_tag="ACJJD2_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HGG7579915.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATSKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLVDAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRSCVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADFEAYAAKLGEWKL"
     gene            complement(5722..6342)
                     /gene="tmk"
                     /locus_tag="ACJJD2_001392"
     CDS             complement(5722..6342)
                     /gene="tmk"
                     /locus_tag="ACJJD2_001392"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HGG7579916.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(6402..7397)
                     /gene="mltG"
                     /locus_tag="ACJJD2_001393"
     CDS             complement(6402..7397)
                     /gene="mltG"
                     /locus_tag="ACJJD2_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HGG7579917.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLYTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            7481..8053
                     /gene="ampD"
                     /locus_tag="ACJJD2_001394"
     CDS             7481..8053
                     /gene="ampD"
                     /locus_tag="ACJJD2_001394"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HGG7579918.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            8247..9533
                     /locus_tag="ACJJD2_001395"
     CDS             8247..9533
                     /locus_tag="ACJJD2_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HGG7579919.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVCDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            9681..>11652
                     /gene="ligA"
                     /locus_tag="ACJJD2_001396"
     CDS             9681..>11652
                     /gene="ligA"
                     /locus_tag="ACJJD2_001396"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HGG7579920.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETTDKTVAESDQTPSEG
                     SSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQA"
BASE COUNT         2720 a         3359 c         2902 g         2671 t
ORIGIN      
        1 aattcagaat caagacaggg caataccata ctggttttgc accaacccgc tataaaattg
       61 cataaaaaaa atagacgctg taaaacacag cgtctatttt ttatctggcg gagtaagagg
      121 gattcgaacc ctcgatgcag gttgacccca catgcttcct tagcagggaa gtgccttcag
      181 cctctcagcc attactccta aggaagctgt aactataatc aacttttccg ataccgtcaa
      241 ggaaaaatgg aaagcaaata ttaatctttt gaaataaaat aagatttacc ctgattatac
      301 ccaatcaggc acttcttttc ttcctgaatg gaaatattcc tgactgccac atcctcaagc
      361 aaaatgcttt tgtgcatcct gtttgatttc ctgaaaccac gcgtcttcag gaaaacgtgc
      421 aagcgcggca tccaatgttg acagtaggtt ttgcgacagg gctttggtca ggtattcctc
      481 ctcgttggct tctgccgctt tgtcgggctg ttgtgccaaa ccgtcggcac gggctttgtg
      541 tccgtgtgcc aaatatagtg gattaacaaa aatcaggaca aggcgacgaa gccgcagaca
      601 gtacagatag tacgacaagg cgaggcaacg ccgtactggt ttaaatttaa tccactataa
      661 ttgagcgcgg taattttttg cgcccaaagc tgcggtatgt cgggattgtc ttcaatcatg
      721 acggaaagga tggatacggc ggtcgccagc ctgccgccgt tcattctaag gtcgagggaa
      781 cggttgggcg gcagggtgct gagtgtttct gccattctga accaaaattc gccactggct
      841 tcgtcgggtg cgttcaattt gagcatttca tagtgaacct cctgatcgtc gttttgcacg
      901 agaccccata cttcagcaag gattttctgt tcttcccggc tcaagtgttg ccatttttca
      961 atatgttgct gcatatcttt tccctttgaa tctattttat atagtctgaa atacagcgcg
     1021 aatcctgtcc aaatcctcct gcgtatctac gccggcggca ggagcttctt tggcggtttc
     1081 gacggcaatc gggtagccgt gccacaggac acgcagttgc tccagcgatt caatggtttc
     1141 cagcggcgaa actctcattt cggtgtagcg ttgcaggaag ccgacgcggt aggcgtagat
     1201 gccgatatgg cgcaggacgg cggtttcaaa cggcatttcg cgttttcctg cacgcatcgc
     1261 atcgcgcgga tagggaatcg gggcgcggct gaagtagatg gcgttgcggt ttttgtcgag
     1321 gacaactttg acggcattgg gattcatcaa ttcgtcgaaa tcgtgcaatt cgtgggcggc
     1381 ggtcgccatt tggacgttgt tttcgacgag tacttcggcg gtgcggtcga tgagttcagg
     1441 tgcaatcagc ggctcgtcgc cctgtacgtt gacaaccacc agatgcggcg gcagcttcag
     1501 cgcggcagag gcttcggcaa ggcgcgtcgt gccgctttcg tgccggtttg aagtcatgac
     1561 gacttcgacg ccgtgcgcct gacaggccgt ctgaatatcg ggatggtcgg tggcaacgac
     1621 gacgcgcaca gctttacttt ttgccgcctg ttcggcaacg cgcacgacca tcggtttgcc
     1681 gtggatgtcc gccaaggctt ttccgggcag gcgcgacgaa tccagccgcg ccggaatcaa
     1741 tacgacgaat tcggtcatgc ttcgagttcc tcttcgccca acggacgcgc ttcgttttcc
     1801 agcatatagg gaatgccgtc tttaatcgga taggcaagct tcgcctgacg gctccacaat
     1861 tcctgtttgt cctgatgata ttccagcctg cctttggtaa cggggcagac gaggatgtct
     1921 aagaattttt tttccatagg gttgctttcg ggtttgatgg ttcaatcaat cggatgccct
     1981 cttcaatatt tcagacggct atcatttatt tctgatgcct tttcccaacc tgtccggctt
     2041 gtttacagcc cgcatcggga tttttaccgc cgcagatgat gcgccgcaac tcttccgtaa
     2101 acgcgggcag atgatgtcgc gcgattttcc ctgacaatgc agtccaagat actgctattt
     2161 cactcatcga tttcttgatt aagcgcggat ttttggcaac gacggactga ccgacaggcg
     2221 aaccgtaaaa ggcaatcatg ccgtcaattt cttcttgcgt gtatatctca cgggcattct
     2281 tcaataaagt attacggaca gcctgtttca cttcgggcgt aatcaaatct ttcaaaacat
     2341 tctcacgata acggttaaag gcttctgccg cctgatcttt tttcgcttcc ggcatttcgg
     2401 caagggcttt gtccgcatac ggtttaaatc cggcattaaa gccctcaatc atattttttt
     2461 ctatatcccg gtcaaaattc tgcgtatcca gccaacgcgc caacgacgcg tcgctgggcg
     2521 gggcggcaaa agcgttggtg cacaatgcca gcgtggcgaa gggcaataac aaggttttca
     2581 gtttaatatt caatccttta acgaatgatt aatgcagata aaaaatacga ccgattttct
     2641 cattcctgtc caagtggaaa tccggagatt tgggatttct gaagcctcct aggcattcct
     2701 gaaaattcga gacttagatt cccgcctgcg cgggaatgac ggcgcgaggc gttcttattc
     2761 aaatccgtaa tcactccgcc caaaccgtgc tttcagacgg ccttcggtac atcttccaac
     2821 cgctccaaca caaacgccgc caaatcaggt tcgattatcg cacaaacggg caacacccaa
     2881 acattatcgg tgcaaatgcc gtctgaaaat ttgaccgcat ctttctccgt aataatgacc
     2941 gcgtccgcat cgggcaaatc tgccgccgaa atgtcggcgt ggtcgggcag cgcgacggtt
     3001 cgcttcacgg taatgcccat attccgcaac gaatcgaaaa aacgcgccgg cttggcaata
     3061 cctgccacgg cgacgacggt ttgatttttc agacggcctg tgtccagtat ttcggacgga
     3121 ttgttcaaac ggtaaattcg tcccgcttcg atacggctgt gaaacatatt ttcagacggc
     3181 ctaaacagcg catccgcctt gccgccgctg acgacgaccg tatccaccga atccagccgc
     3241 gacaaaggtt cgcgcaaatt gccgttgggc agcaaatcca aatccgtgcg ccccgtatcc
     3301 gccgccggaa acaccgcgat ttccacatct cgccgcaggg cgtaatgctg caaaccgtcg
     3361 tccgccacaa tcagtccgat gtcgggatgc gccgccagca acgccctgcc tgcctctgca
     3421 cggctgctgc ccaccgccgt cggcgcaccg gttttgctga acagcagcaa aggctcgtcg
     3481 cccgcatctt ccgcacggct cgcggcattc aatacatgaa ccgccttgct cttgcgcccg
     3541 tagcctcggc tgatgatgcc gaccttgaca cctttttcct gcaaacccga caccagcgcg
     3601 gcggcaatcg gcgttttccc cgtcccgccc gcgtggatgt tgccgaccac gaccacaggc
     3661 acgggcagct tttcgctttg ccgttttccc gataaaaaat ccgtccgccg ttttgccgca
     3721 attttggcaa acagcccgga gagcggctta agcagaaaag acaaaaccgg ataaggtttt
     3781 tgccaatgcc gttcgataac ggtatgaaat ttgaaacaat tcggcatatt cgatacaaat
     3841 cctcgaagca aaatcagccc ggggcattaa tcatgcgtac ccgatacaga cccacctata
     3901 aacaacgcga agaccaaacc gataagcgaa ccaatcaggt aaataagcaa ctgcgcttta
     3961 cagaaattgg cgcggttcgg gttgcctctg ccgaacaccc aaacaaaaat tgaccaaagg
     4021 aatcatgaaa acaatcatcg tcaacaccca ctgccctgtc gtcatgacag gggcggtttg
     4081 ttttgaagtc tcgggcatat cgccgatatg ataacggaca gtctccatct ctttcatttt
     4141 ccagtatctt tcatttatca atctgacagc aaaatgccgc ctgaaaacag ttcagacggc
     4201 attttaaacc gcaaacggct tacagcttcc attcgcccag cttggcggcg taggcttcaa
     4261 agtcggcaat cggacgggtt gccacgccgc tttccatcgc tgctttggcg gcagccgtag
     4321 caacgcgcgg cagcaggcgg gaatcgaacg gagtcggaat caggtattcc gcgccgaatt
     4381 caaatttctt accgtaagcg gcaaccactt cttcggttac ttcttccatc gccaaatccg
     4441 ccaaagcata cacgcaggag cgtttcattt cttcgttgat ggtcgtcgcg ccgacatcca
     4501 acgcgccacg gaagatgaat gggaagcaca atacgttgtt cacttggttc gggaagtcgg
     4561 aacggccggt accgataacc acgtccggac gggtttcttt tgccagcggc ggcaggattt
     4621 ccggattcgg gttggccatg gcgaacacga tgggtttttc gttcatcgtg ttcaacattt
     4681 cgggggtcag caggttcgcg ccggagaggc ccaagaagat gtctttacct ttgacggcat
     4741 cgacaagtac gcgctggcca ttgtcttcaa cggcgtagaa ttttttggat tcgtccatgc
     4801 gatctttgtc ttcgcgggtt tggtaaatca cgcctttgga gtcgcaaacg gtcacgtttt
     4861 cgcgtttcaa gcccaaatcc agcaattggt tcaagcaggc aatcgcggcc gcacctgcgc
     4921 cggaacacac caaagtcgct tcttcgattt tacggccggt aaaacgcagg gcgttcaata
     4981 cggcagcggc ggtaatgatg gccgtgccgt gctggtcgtc gtggaatacg gggattttgc
     5041 agcgtttgcg taattcgcgt tcgatgtaga aacactcggg tgctttgatg tcttcgaggt
     5101 tgatgccgcc gaaggtcggc tctaaagcgg cgatgatgtc cacgagtttt tgcgggtctt
     5161 tttcatcgat ttcgatgtcg aacacgtcca caccggcgaa ttttttgaac aatacgcctt
     5221 taccttccat cacgggtttg cccgccagcg cgccgatgtc gcccaagccc aaaacggccg
     5281 taccgttgga aatgacggcg accaagttgc ctttggcggt gtatttgtag gcattttgcg
     5341 gatcggcatg gatttccata caaggagcgg ctacgcccgg agagtacgcc aacgccaggt
     5401 ctttagacgt ggccagagat ttggtcgggg taacggagat tttgcccgga acgggtaatt
     5461 cgtggaactt gagggcggct tctttcaatg agttttccat gtgtcaatcc tgttgcgaga
     5521 aaaagatttg aatcggactg tccgaaacgc tttcgggtca tcatgttacg ggcggttcgt
     5581 taatattgcc gacgcatcct gccttgtaac cgagcgtaat tctatcatgc cgaaagtttg
     5641 gcgcataccg ccattttcac ctgcggcact gccgtttgat tttcggcgcg ggtggatgcg
     5701 cttgtttcaa tatttgccgc attaacagcc gaaatgtccg tccaacactt tttctatgtt
     5761 gtttctgact tcatccaagc tgcggttact gtcgataatg gcgtaccgtt cgggacaggc
     5821 ggcggcacgg ttcagataaa cgctgcgcac acgcatgaag aaatctgcct gttcctgctc
     5881 gaaccggtct ttctcgcgcg actgtccgat acgcgccatc gacacttcca gcggcacatc
     5941 caacagcagg gtcaaatcgg ggcgcaaacc gccctgcacc caatgttcca aaatttcaat
     6001 gtcttcagac ggcatccccc gcccgccgcc ctgataggcg aaggttgcgt cggtaaaacg
     6061 gtcggacacg acatggatgc cgtctgaaag tgcaggcaat atcacgtctt caatatgctg
     6121 cattctggcg gcgaacatca tcagtgtttc cgcacgcaaa ccggctttgg tttcagggtt
     6181 gagcaggatt tcgcgcaagg cctcaccgac cggcgttccg cccggttcgc gcgtgaacag
     6241 cacgggcagc cccctccgtt caaaccatgc cttgatgacg gcaaggttgg tggatttgcc
     6301 ggcaccgtct atgccgtcca aagtgatgaa ttgcggtttc atgcttgcag ttccggtaag
     6361 ggtatgccgt ccgaaaacac aaacttttca gacggcatgg tttatttttt caaaatatat
     6421 ttgcgaacgg cggcgttgtg ttcggtcaaa tcatggctga actggctcaa gcccgtaccg
     6481 tccattttgg acacgaaata caggtatttt tcaccggacg gatgggcggc ggcatcgagt
     6541 gccgccttgc cgggcagcgc gatcggggtt ggcggcagac cgccgcgcgt gtaggtgttg
     6601 tacggcgtgt cgcggcgcag gtcggcttta cggattttgc ccttgtatgc cgcacccatg
     6661 ccgtaaatca cggacgggtc ggtttgcagg cgcataccga ttttcaggcg gttgacgaag
     6721 acggaagcga catggtcgcg gtcggcttca tgccctgttt ccttttcgat caggctcgcc
     6781 ataatcagca tttcataagg gtttttataa ggcagcccgt cctgcctgct ttcccatgcc
     6841 tcattcagtc ggcgttgcat cgccttgtag gcgatttggt aaatccgtaa atcgctgccg
     6901 cccgcatcga tttcgtagct gtcggggaaa aactgccctt caggattgcc gctgaaggca
     6961 tcaggggcaa cttccgccat cagtttttca ttgctccagc ctttggtgtc gtgttcgatg
     7021 tcgggcgttg cgtcgatgac tttcctcata tgcgaaaaac gcgaaccttc gataatctgc
     7081 acggtaacgg aatccggcct gccgccgcgc attttctgca agatatccca agcagacact
     7141 tccgaaggca gtctgtacgt ccccgtatac agcctgttgt gcacacccaa aacgtaggcc
     7201 gccgccgtca aaacatgcct gctgaacacg atgcggtctt cggcaagttt cctgccgacc
     7261 gacgaaatac cctggttttt ggcaatttta atcctgtatg ccctgccgtt gtctttaggg
     7321 acgaaaagca gcgcggcgaa aacggctgcc gatacggtca aaaaaacggc agaccatttc
     7381 aacaattttc tcaacatggt aggattccca gcattcggaa tacgtcttaa aattcgggcg
     7441 acagtataac ccaaattgcc cgccggacag gaagaacatc atggacaatc acgccgaagc
     7501 acactggcaa aacggctggc ttcaaagcat acgccatacc ccgtcgccca atttcagccc
     7561 gagggaaacg ggggaaacgg tttccctgat cgtgttgcac aacatttcgc tgccgccgtt
     7621 cgaatatggt acggatgcgg tggaaaagct gtttgccaac cggctcgacc ccgacggaca
     7681 tccgttcttc agcctgatac acactttgcg cgtatccagc cattttttaa tcaaacgcga
     7741 cggcgaaacg gtacagttcg tttcctgcga caatatggca taccatgccg gcgtatcctc
     7801 gtttcgcgga cgggaaaaat gcaacgcatt ttccatcggc atcgaactgg aaggctgcga
     7861 tttcgaaccc tttaccgaag cgcaataccg ttcgctcgaa gccttgttgg acgcaatctg
     7921 ccgccgctac cccatcacgg cggtaacggg gcaccaagac atcgcgcccg gccgcaaaac
     7981 cgaccccggt cattttttcg actggcggcg gatacggggg aaagggtttc ccgtggacag
     8041 aaatgccgtc tgaaaaccac agattttaga tggcatttcg gaaaatttcc gcttatttcg
     8101 acacactgct gtcagaccct gcaattttcg ttataattca aacgttataa ccggccgttc
     8161 cgtcagactg ccggaaacgc aagcccgatt taaccgcagt acccgcactt tgcgcatcct
     8221 gcatcccgaa atttaaagtg attgccatga tttacatcgt actgttcctc gccgccgtcc
     8281 tcgccgttgt cgcctacaat atgtatcagg aaaaccaata ccgcaaaaaa gtgtgcgacc
     8341 agttcggaca ctccgacaaa gatgccctgc tcaacagcaa aaccagccat gtccgcgacg
     8401 gcaaaccgtc cggcgggtca gtcatgatgc cgaaacccca accggcggtc aaaaaaacgg
     8461 caaaacccca agaccccgcc atgcgcaacc tgcaagaaca ggatgccgtc tacatcgcca
     8521 agcagaaaca ggcaaaagcc tccccgttca aaaccgaaat cgaaaccgcc ttggaagaaa
     8581 gcggcattat cggcaactcc gcccacaccg tttccgaacc ccaaaccgga cattccgcac
     8641 cgaaacctgc cgacgcgccg gcaaaacctg cacccgttcc gcaaacacct gcaaaaccgc
     8701 tgattacgct caaagaactg tcaaaagtcg aattaccctg gtttgacgtg cgcttcgact
     8761 tcatctccta tatcgcgctg accgaagcca aagaactgca cgcactgccg cgcctttcca
     8821 accgctgccg ctaccagatt gtcggctgca ccatggacga ccatttccag attgccgaac
     8881 ccatcccggg catccgctat caggcattta tcgtgggtat tcaggcagtc agccgcaacg
     8941 gacttgcctc gcaggaagaa ctctccgcat tcaaccgcca ggtggacgca ttcgcacaaa
     9001 gcatgggcgg tcagacgctg cacaccgacc ttgccgcctt tatcgaagtg gcttccgcac
     9061 tggacgcatt ctgcgcgcgc gtcgaccaga ccatcgccat ccatttggtt tccccgacca
     9121 gcatcagcgg cgtagaactg cgttccgccg taacgggcgt gggtttcgtc ctggaagacg
     9181 acggcgcgtt ccactatacc gacacgtcgg gctcgaccat gttctccatc tgctcgctca
     9241 acaacgagcc gtttaccaat gcccttttgg acaaccaatc ctataaaggc ttcagtatgc
     9301 tgctcgatat tccgcactct ccggcaggcg aaaaaacctt cgacgatttg tttatggatt
     9361 tggcggtacg cctgtccggc cagttgaacc tgaatctggt caacgacaaa atggaagaag
     9421 tttcaaccca atggctcaaa gacgtacgca cttatgtatt ggctcgtcag tccgagatgc
     9481 tcaaagtcgg tatcgaaccg ggcggcaaaa ccgcattgcg cctgttctcc taaaatcgaa
     9541 tgcaatcaaa gcggatatgt cgttacggca tatccgcttt ttttcgggta aaattcagct
     9601 gttttcaacc tatcattttt cagacgacct ttgcccgttt catcccgtat cagacaaagg
     9661 tcgtctgaaa accttctctc atgaatccaa actcaaaaca taacactaac tttaccaatc
     9721 ttcttaaacc gtctgatagt gatataaaac aatttgccgc acaacacatc cgccacctca
     9781 ccgacctgct caaccgctat gcctacgaat actacaccct cgacgcgccc agcgtacccg
     9841 atgccgaata cgacaaatta ttccgcgagc tcgaagcgtt ggaattaaac catcccgagc
     9901 tcaaactgcc cgacagtccg acccagcgcg tcggcggcga gcctttagcg ggatttgccg
     9961 aagtgcgcca cgaagtgccg atgctgtcgc tgaccaacgc tttttccccg caagatgaaa
    10021 acggcgtgtt cgaccatgcc gaaatgtacg ctttcgacca acgcgtgcgc gacggtttgg
    10081 acggcggcaa acccgaatac gttatcgaac ccaaattcga cggcctcgcc atcagcctgc
    10141 tctaccgcga cggcgtattg gtacaggcgg caacgcgcgg cgacggcaca acgggcgaag
    10201 acgttaccca aaacatcaaa accgtcgcca acatccccct gcggctgcac ggcgaaaata
    10261 cgcccgaact catcgaagta cgcggcgaag tactgatgca aaaagccgat tttgccgccc
    10321 tcaataaaag acaagccgaa aacgggcaaa aaccctttgc caatccgcgc aacgccgctg
    10381 ccggcagcct gcgccaactc gattcgcgca tcactgcgca acgcaaactg cactttttcc
    10441 cctactccgt cgcccgccag caaggcggtt tcgtcgcgga agaacacatc caagaactcg
    10501 cctatttcca agcactcggc ttcagtctgc caaatggcaa tttcggctgt ttcaaaaata
    10561 tcgacgaagt attggcgttt tacgaacaaa tgcagcaaaa acgccccgaa ctgccctacg
    10621 aaatcgacgg tatggtggtc aaagtcaaca gcttggcgca acagcgcgaa ctcggcttca
    10681 tctcacgcgc gccacgctgg gcgattgccc acaaattccc tgccgaagaa gccctgacca
    10741 ttgtcgaagc gattgacgtg caaatcggca ggacgggcgc ggtaacgccg gttgcccgat
    10801 tacaacccgt attcgtcggc ggcgtaaccg ttaccaacgc caccctgcac aatcaggacg
    10861 aagtttcccg aaaagacgtg cgcgtcggcg ataccgtcgt cgtgcgccgc gctggagacg
    10921 tgattcccga agtcgtgcgt gtgatttttg aacgccgccc gatgcaggaa accgccgttg
    10981 ctgtttcaga cggcatcggg catcggcagg acgatttgtt tgccgaaaca ccgtccgcta
    11041 atcaaaccca atccgttccg ctccacaagc cctaccgcct gccgacccat tgccccatct
    11101 gccgcagcga aatcgaacgc gaagaaggcg aagccgtcgc ccgatgcagc ggcggtatgc
    11161 tttgtcaggc acaacgcgcg caaggcttaa tccacttcgc ctcgcgcaaa gccatggaca
    11221 tcgacggctt gggtgaaaaa caaatcgaac agcttgtcgc ccaagacctc gtccgccact
    11281 tcgccgacct ctaccgcctc gatattccga ccctgcaaaa aatgaaagaa acgacggaca
    11341 aaaccgttgc cgaatcggat caaacgccgt ctgaaggcag ttcggtcggc gcgtcgggca
    11401 aacataaaaa acaaccggtc aagtgggcgg aaaacatcct cgggggcata gaatccggca
    11461 aaacgcccga actcgcgcgc ttcctgttcg cgctcggcat ccgccacgtc ggcgaacgca
    11521 ccgccaaaac gctggcgcag gcattcggca cattggaacg cgtccgccgc gcccccgaac
    11581 ccgtcctcgc ctgcctgccc gacatcggta cggtagtggc gcattccatt gcccacttct
    11641 tcgcccaagc cg
//
LOCUS       DBBZXW010000059        10979 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.059, whole genome shotgun sequence.
ACCESSION   DBBZXW010000059 DBBZXW010000000
VERSION     DBBZXW010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10979
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.059"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            142..1539
                     /gene="aspA"
                     /locus_tag="ACJJD2_001397"
     CDS             142..1539
                     /gene="aspA"
                     /locus_tag="ACJJD2_001397"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HGG7579921.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1611..2486)
                     /locus_tag="ACJJD2_001398"
     CDS             complement(1611..2486)
                     /locus_tag="ACJJD2_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HGG7579922.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDIGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVEAAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(2488..3222)
                     /locus_tag="ACJJD2_001399"
     CDS             complement(2488..3222)
                     /locus_tag="ACJJD2_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HGG7579923.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPKAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYM
                     PIVGVILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATN
                     VWYFYRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3245..3724)
                     /gene="ybaK"
                     /locus_tag="ACJJD2_001400"
     CDS             complement(3245..3724)
                     /gene="ybaK"
                     /locus_tag="ACJJD2_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HGG7579924.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPVQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3799..4161
                     /locus_tag="ACJJD2_001401"
     CDS             3799..4161
                     /locus_tag="ACJJD2_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG7579925.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKKDAATA"
     gene            4196..5059
                     /locus_tag="ACJJD2_001402"
     CDS             4196..5059
                     /locus_tag="ACJJD2_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HGG7579926.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     EASAEPLAAQEPNLAFAAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELAAPNGGIFKA
                     VHLFFKTENAE"
     gene            5153..6112
                     /gene="ttcA"
                     /locus_tag="ACJJD2_001403"
     CDS             5153..6112
                     /gene="ttcA"
                     /locus_tag="ACJJD2_001403"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HGG7579927.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIMVCLSG
                     GKDSYALLDILRQLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(6206..9145)
                     /locus_tag="ACJJD2_001404"
     CDS             complement(6206..9145)
                     /locus_tag="ACJJD2_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HGG7579928.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRAADENPELLFAA
                     KQYADNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTRQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFAKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFV
                     IVDEPHKFPTRESAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSGGKEAKFELNEKDKKQTFKLAKGEDLAKIHPAVSDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIHAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLGLLNKLFSDGIIDDNENFTE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYRELLEKLAQTAKIRMQTLHQAFYRVRNELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYQLVGSKIHPTKFTDKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTQSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9158..>10979)
                     /locus_tag="ACJJD2_001405"
     CDS             complement(9158..>10979)
                     /locus_tag="ACJJD2_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HGG7579929.1"
                     /translation="NSTQLEQLKKLFPACFDADGNFLIDRLQAEIAPQTDIGREFYEM
                     NWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIRGDNLEVLKHLKNAYTNS
                     VKMIYIDPPYNTGSDGFVYQDDRKFTPAELACLANIDEDEAARILDFTDKGSNSHSAW
                     LTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVFGEGNFIKDLIVNTSEGG
                     GNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKKIVINDELYWIQEDAVREQFGKY
                     GNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSYGKTIIGKLRKVSDDFSKFHSIL
                     NIGNISKNLTKDGIRELEELFETGKGYSPFETPKPLDLLKRLVLSATFKGNQTDLILD
                     FFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARKAGYPTIFDITKARIE
                     KAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDLPLNDELSEEQLQTLL
                     TTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMNAGFTSADLLAFIRKLDDDADFN
                     PNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNVIIRV"
BASE COUNT         2647 a         2935 c         2581 g         2816 t
ORIGIN      
        1 cccgaaaaca acgtttcccg ttttcagacg gcatacgata tggacaattt catccggccg
       61 gtatagtgtt catcctgcgg cggcatcttt ccgatggcgc attttttcaa tattaattat
      121 ccgacttaca aaggtaaaaa catgactgtc cgtatcgaac acgatttatt gggcgaccgc
      181 gagattcccg ccgaagtgta ttggggcatc cacaccctgc gcgccattga aaactttaaa
      241 atctccacac aaaaaatttc tgacgtgccg cagtttgtcc gcagtatggt gatggtgaaa
      301 aaggcgacgg cacaggcaaa cggtgagttg ggcgcggtca agcccgaaat cgccgccgcc
      361 attgaaaaag cctgcgacga agttctgctg aacaaccgct gcctcgacca attcccgtcc
      421 gacgtgtatc agggcggtgc gggtacttcg gtcaatatga acaccaacga agtcatcgcc
      481 aacctcgcat tggaagtctt gggatacgaa aaaggccgct acgacatcgt caatccgatg
      541 gatcacgtca atgccagcca atcgaccaac gatgcctatc ccacgggctt ccgccttgcc
      601 gtgtattaca gcatcggcga attgctcgac aaactgactg tcctgaaaaa cgcctttgcc
      661 gccaaagccg aagaatttaa agacgttttg aaaatgggcc gcacccagct tcaagatgcc
      721 gtgccgatga ctgccggcca agaattccaa tctttccaag tgttgttgga agaagaaatc
      781 ctcaacctcg accgcacccg ccaactgctg ttggaagtca atttgggcgc aacggcaatc
      841 ggcacgggcg tgaacacgcc caaaggctac gccgaactgg tggtcaaaaa actctccgaa
      901 gtcagcggct tgccttgcaa actgaccgaa aacctgattg aggcgacctc cgactgcggc
      961 gcatatgtga tggtacacgg cgcattgaag cgcacggcgg tcaaactctc caaaatctgc
     1021 aacgacttgc gcctgctctc ttccggcccg cgtgccggct tgaaagaaat caacctgccc
     1081 gaattgcagg ccggttcttc cataatgccc gccaaagtca atcccgtgat tcccgaagtg
     1141 gtcaaccaag tctgcttcaa agtcatcggc aacgacacga cgattacctt cgccgccgaa
     1201 gccgggcaac tgcaattaaa cgtgatggag ccggtcatcg cccaatgtat gtttgaaacc
     1261 atttccctct tgggcaatgc cgcagtcaac ctgtccgaca aatgcgtcaa aggcattacg
     1321 gtcaaccgcg aaatctgcga acgttacgtt ttcaactcca tcggtttggt gacttatctg
     1381 aatccgtata tcggacacca caacggcgat ttggtcggca aaatctgcgc ccaaaccggc
     1441 aaaggcgtgc gcgaggttgt cttggaacgc gggctgttga gcgaagaaga actcaaccgc
     1501 atcctctctc ccgagaacct gatgaacccc catctgtaac gttgcagaca aatgccgtct
     1561 gaagcaggga tgctgcttca gacggcattt tgttatatca atcagccgga ttatatgccg
     1621 aacagtacct tgacttcccc ccaataaaac aggcaggcga tagaacacag tgccaacacg
     1681 attcccgccg tattgattgt gttgattttt tccttaaaga acaatgcgcc cgaaagcgta
     1741 cccaaaacaa tcacgccgat attcataccg gcaaaaacca aggtcggatt atccttcatc
     1801 atttggtgcg cggtgatgta ggttacgata ttcataaaat tcaaaccgcc caagaatatg
     1861 ccgccgacca cactctcaac acgccatctg accgatttgg caaacaggca ggcaaacatc
     1921 agcacacccg ccagcacaaa tgcaaccagc aggttgcccg caaatgccgt tccgcttttg
     1981 gcaagctgtt tgaacaggat atcgataatg ccgtaacctg cccacacgcc cagcagcaat
     2041 gccgcctgcc gccacgcgct tcctgatttt ttgccaccgc tgtgtttcca aagcaggcag
     2101 aacagtgcgg caaatgcgag gcacagcccg attagtttgc cttcgctgag tttttcgcca
     2161 aacagcgtca aggcggcaac aatcggcaaa aacagcgaca aacgctgcgc cgcgtcggat
     2221 ttgacgatac cggcggcttc cacagatttg cccattatca cgaatacgga cggcagcagc
     2281 acgcccaaag cggcaaacag cggccacgtc ggcaaaaatg cgccgatatt gccgatatcc
     2341 ggcttcaata ccagcagggt cagtatgacc gcgaccacat aattgacggc gaccgcctgc
     2401 gcgatgtcga tttttttctt ccttgccatt ttcagcaaaa tggaaaccga cacgctgaac
     2461 acgatgctga ttaacaggta agccatacta tatccatttc tcgggtgcaa ccgccctgcc
     2521 gccgttgaag cggataaagc cggcgatgat gcggtagaaa taccagacgt tcgttgcaat
     2581 aataatcagc acgccgatac ccaaaagggc agtcagcgca cccaaaatat aaagccaaaa
     2641 tgtgcgccaa aaggttttaa tcaggtattc ggtatgtgcg gcatagacaa tgctgtccaa
     2701 actgttccgt ttcatatagg cgagaatcac gccgactatg ggcatatagg cgaaaatcac
     2761 gccgactatg ggcatgaaca gcatgattgc acccaaaccg aacaggatgt aggcggcgag
     2821 gacatagttg cgcccgcttc cgccgccgga cggttcgtaa gtatggcacg aacgtgatgc
     2881 ctgccgttca aacgcctgtc tgaacgcctg tctgaacgcc tgttcgcggc gcatctgttc
     2941 gcggtaaaac tgctccctgc gcgcctgttc gcggcggaat gcctcttcct gccgcccgcg
     3001 ttcctcatgc cgtctgaagg acgcgtcgta ttgcatccgt ttcgacaggt cggaaagcgt
     3061 atcgtaagcc cgttggattt ctttgaactt ttcttccgcc ttcggattgc ccggattgcg
     3121 gtcgggatga tatttcatcg ccagcttgcg gtaggcgcgt ttgatttcgt ccgctcccgc
     3181 ctgcggcgac acgcccaata cggcatacaa atctttgtcc atattgttcc tttatacttt
     3241 cccgtcaaac cgccgcctgt attgttttcg ggttcaaaat atttaaatct ccgggacgga
     3301 tgccgataat gaacccgcgt tttccgccgt tgatatagat ggtttccaaa tccatcaccg
     3361 actgttcgac gtaaatatcc aactttgtcc ggatgccgaa cggcgttgtg ccgccgacca
     3421 gatagcccgt ccacttgttt gcctgtacgg gcgtggcggg ttcgatgtgt ttcgcaccca
     3481 aatgccgcgc cagattgcgg gttgaaatct gcttgtcgcc gtgcatcaag acaatcagcc
     3541 ccttaccgtt ttcatcttgc aaaacaatgg ttttaatgac caagtgttcg tctttgccga
     3601 atagtcgggc aaactgcgcc gtgccgccgt gttcctcata ggcataggta aaaggttcaa
     3661 attcgatgcc gttttcacgc aaaacgcgca cggcaggtgt tatcggataa gtgtgtttac
     3721 tcatttttcg tcatgcaaaa catggaaatc ggtcaagcgc aatgttacca tatatcccct
     3781 ttatcgaagg aaaccgatat ggatatccga tatttcggca caacgccccg ctattccgaa
     3841 gccgtcggcg caaacggctt gattttcctc tccggcatgg ttcccgaaaa cggtgaaacg
     3901 gctgccgaac agactgccga cgtgcttgcc caaatcgacc gctggctggc ggaatgcggc
     3961 tcggacaaag cgcacgtttt ggatgcggtc atctatctgc gcgatatggg cgactatgcg
     4021 gaaatgaacg gcgtgtggga cgcttgggtt gccgccggca gaacgcccgc ccgcgcctgc
     4081 gtggaagcgc ggctcgcccg tccggagtgg cgcgtcgaaa tcaaaataac cgccgtgaag
     4141 aaagatgcgg caaccgcata aacagatttc ctttatattt cagagtacgc aaatgatgaa
     4201 aaccttactg ccctttttcg gcgtggtacg cgtcagcggc gaagaccgcc aaaccttcct
     4261 gcacggacag ctttccaacg acatcaataa tcttcagacc gggcaggcgt gttatgcgac
     4321 ttacaacacg cccaaaggcc gtgtcatcgc caatatgatt gtcgtcaacc gaggcggcga
     4381 tttgctgctg attatggcgc aagacttgct tgaagcaacg gtcaaacgtt tgcggatgtt
     4441 tgtgttgcgt gccaaagccg tttttgaaat ccttgaagat tacgccgtcg gcgcggaatt
     4501 ggaagcatcc gccgaaccgc ttgccgcgca agaacccaac cttgcctttg ccgcacaaca
     4561 agattcagac ggcatctgct ctatcgctct gcctcatggc ggcatccttc gcatcgcccc
     4621 caaaaacacc ttgccgcctt atgatgccgc cgccgaaaac gcgtggcggc tgcacgaaat
     4681 ccgtagcggt tatccgtgga tatgcgcggc taccaaagaa actgccgttg cccaaatgct
     4741 caaccagcac atcatcggcg gcgtacactt caaaaaaggc tgctatcccg gtcaggaaat
     4801 cattgcccgt gcccagtatc gggggcaggt caaacgcggc ttggcggtat tgtcgggaaa
     4861 ttcggccgtc gaagcaggaa ccctgctgac ggcggacggc gaagaggccg gcatcgtact
     4921 cgacagcgtt caagattcgg aaaactttac cgcccttgcc gtgattaaat tctccgccgc
     4981 acaaaaagaa ctcgccgccc caaacggcgg tatcttcaaa gcggttcatc tcttctttaa
     5041 aaccgaaaat gcagaataat ccctctgatg ccgtctgaag cccttcagac ggcattgccg
     5101 ccccgtcaat cggttacaat gccgcctttc taattttcaa acccaaaccg ccatgtccaa
     5161 aaaaaccaaa caagaactcg aaaacaacaa actcagcaaa cgcctgcgcc acgccgtcgg
     5221 cgacgcgatt aacgatttca atatgatcga gccggacgac aaaatcatgg tctgcctctc
     5281 cggcggcaaa gacagctatg ccctgttaga catcctgcgc cagctccaag ccagcgcgcc
     5341 gattgatttc caactggttg ccgtcaatct cgaccaaaag cagccgggct tccccgaaga
     5401 agtattgccg acctatctcg aaagcatagg cgtgccgtac aaaatcgttg aagaagacac
     5461 ctactccacc gtcaaacgcg tattggacga aggcaaaacg acttgttcgc tgtgcagccg
     5521 cctgcgccgc ggcatcctct accgcactgc aaaagaattg ggctgcacca aaatcgcctt
     5581 gggacaccac cgcgacgaca tcctcgccac cttgttttta aatatgtttt acggcggcaa
     5641 actcaaagcc atgccgccca agctggtgag cgacaacggc gaacacatcg tcatccgtcc
     5701 gctggcgtat gtaaaagaaa aagacttaat caaatacgcc gaattaaaac aattccccat
     5761 catcccgtgc aacctctgcg gctcgcaacc caacctgcaa cgccaagtca tcggcgatat
     5821 gctgcgcgat tgggacaaac gcttccccgg ccgcatcgaa tcgatgttct ccgccctgca
     5881 aaacgtcgtc ccttcccacc ttgccgatac cgaactcttc gactttgtcg gattggaacg
     5941 cggtcaaacc ctgaaacacg gcggcgattt ggcgtttgac agcgaaaaaa tgcccgaacg
     6001 tttttcagac ggcagcgaag aagacgaaag cgaaatcaaa atcgagccgc aaaaagccga
     6061 acgcaaagtc atcaacattc tggcgaacaa gccgaaaacc tgcggcgcgt aaacctccac
     6121 cgtcaaaaat gccgtctgaa gcccgtttgg cgtttcagac ggcattttaa aatcccgaag
     6181 cagacggctt ccaaacattt gtttctcagt gtccgttttc agaatgcccg cctgcgggca
     6241 tattttgccc gatcagttcg gctatcctct cgccgtcaaa ctgcgttttg aacaccacct
     6301 tgatttcttt ggaaatctcg gcaaacagct tttcggcatg tttgattttc cgctcttcgc
     6361 tttttcgcaa atcttccgcc ccgtcagtcc ctttggcttc aatcacaaag ttcagaatct
     6421 cgccgctttg ggttttcacg atataggcaa aatcgggcga atacgtgccg ccgccggcaa
     6481 cggggatttt gatggagttt ctcggtattt tagtgaatac ggttacgcct tcaatttggt
     6541 tgttggcgac attttcatgt tctatatccg aatcgtagaa aatctcgtcg aagagatagc
     6601 cggcggcagg ccggtgctcc gtatcttcaa atcttcccaa atctgctttt ttcaccgcgc
     6661 gcggtttgcc gtctttatcg gtaaatttgg tcggatggat tttgctgccg acaagctggt
     6721 aatccagttc gaatttatgg aaggaatgat gaagcaaaaa ccggttgaag ccgtttttga
     6781 tttgggcgat ggtctgcata ttcaaaaaat cgccaatgtt cagttcgttg cggacgcggt
     6841 aaaacgcctg atgcaaagtc tgcatgcgga tttttgccgt ttgtgccagt ttttccagaa
     6901 gctcacggta agtcattgtg ttgaaacgga taaaatcttc atcttcaaag ctgtctatgc
     6961 ggcgggaaag cataagcccg ttgttgatat aagcttcgtt taccgccgtg cgtatgcctg
     7021 cctgcgggaa tttggcggcg ttttcacgca aataggcagt aaataaatcg acaaattcgg
     7081 cttcatcttt gattttgtac tgcaaaacgg ctttatggtg aatcagctcc cacaaggctt
     7141 tgagttcttc atatttgcct tcgcgcatga tgatggtgtc tttgccttcg tctttggcgt
     7201 tgctgacttt gcctttgtcc aaacctttgg ggaaggcttc gggataggcg gcttttaatt
     7261 tgtcatagcc gtcttcggta aagttttcat tgtcgtcaat gatgccgtct gaaaacagtt
     7321 tgtttaacaa tcccagaggt ttgatatcgg ggtatttttg caatattttt tgtttcagct
     7381 cttcggtaaa cttttttgag atttcttcct gaaaagaatt atcgttgatt tcgccgacaa
     7441 gctgcttcac aaagtctttt tcgctgctat cgacaaaata attcagtttg tacggcacat
     7501 cgcgcacccg cgccatcagc tcgtttaccg gcaggcgcag gccgcgtccg acttcttgca
     7561 gcttggaagt cgtgctgccg ctggaacgca gtttgcaaat ctggaaaacg ttgggattgt
     7621 cccagccttc gcgcagcgtc catttggaaa aaataaagcg gcgcgggttg tccaaagaca
     7681 acagtttttc cttatcgtgc aggatttcat tgatttcctg ctcgattcta tcgtcgctgt
     7741 ctgtattgtc tttggaaaaa taaccgccgt ggcaggcgga tacatcgtcc aacgtctttt
     7801 gcaggtaatc gcggtaaaac gggtcgcttt ccgttttcag gcggcgtgcc gcttccgcgt
     7861 gaatccagct ttcaaattta tctttcaggc tgcctgaaag ctcgttgccg ctgcggtagc
     7921 ccgcaatatc atcaataaaa aacagcgtca gcggcttgat tttgggctgt ggcgcgcgtt
     7981 ctgccaaaag tgcgcgttcc agcttgaaat gttcggcaac cgccctctgc atcatcgcat
     8041 cctgcaccgt ttgcgaatag gaataagggt tgatgacggc gcccgttttc aactccaagc
     8101 cgttgcttaa caccaccacg gttttattca ttttgtcgat tttcaaatct gaaacagcag
     8161 gatggatttt cgccaaatct tcgccttttg ccagtttgaa cgtctgcttt ttgtcctttt
     8221 cgtttaattc aaatttcgct tctttgccgc ccgacgacac cagttttacc gccgcatcca
     8281 tgccgccctg catttcttcc tgaaacacgc gcacgccttt gaccagcccg tcgttaaacg
     8341 cgtctactgc cgtcaaacgg taaagcaagt tgtaatattc atcgttaaat gtcgcaccgt
     8401 agcgcaaaat atattgcggt tttaagcgtt tgatattgcc ccatgttttc gcgctctccc
     8461 gggtcgggaa tttatgcggt tcgtccacaa tcacaaacgg gcgcacggcg gccaatgcat
     8521 caacgggatt gtcaaacaaa tctttcaatg ccttgtcgcc cgtatcgttc atggacgacg
     8581 aattaaccat gcccgcgtta atcagcagca catggatttc ctttttgttt tccgctttgg
     8641 caaattgctc aatcgttatg ggcgcattgg actttttgcc cttattcttt ttcgcgcttt
     8701 ccaccacata ggttttcagg cgcacgcctt cataatcgcc gccgaaatcc tgttcaaaat
     8761 gctctgccaa agccttgctt tgcaaaaact gccgcgttcc cgccttaatg gacaaagtcg
     8821 gcacgaccac gataaatttg aacacgccca gccaacggtg cagctcgaac atggtttgtg
     8881 tgtaggtata ggttttgccc gtgcccgttt ccatggaaat atcaaggata ttttggtcgt
     8941 ccgaacggtc ggggaatcgg ccgtctatgc cgttttggct ttgcactttc aggatattgt
     9001 ctgcgtattg ttttgcagca aacaaaagtt cgggattttc gtctgccgcc cgatatttgg
     9061 gcgttgcccc gtcaaacacg cccaaaaccg ccgaaaccgc ccgcatttgg tgcggctggt
     9121 ttttctcgta attaaaacca ctcataaact ttctccgtca aaccctgata atcacgttta
     9181 actcaatttc ttttttattg gcataaccgc gaaccgcctg gtcaagttcg tgctgcatgg
     9241 cgcttgccat attgctgccg aatacaatca cgcggttggg attgaaatcc gcatcgtcgt
     9301 ccagcttgcg gataaacgcc aacaaatcgg cggaagtaaa accggcattc atcagataca
     9361 gccgtttttc gcacagatac gccgtgtaag cccctaaccg cacaggctca accggcgtgg
     9421 tcagtgccgc cccgtcatac agcgtccagg tggtcagaag cgtttgcagc tgttcttcgc
     9481 ttaattcatc gttaagcggc aaatccggtt gttcgggcga aaaatccttg tccggatgct
     9541 gcctgaaatt gtctgccgtt tgaaagattt tgaagcccga atcgcccgtg taatcgggat
     9601 gttcgacgcg gattttggcg gcggcttttt ctatgcgggc tttggtgatg tcgaagatgg
     9661 tcgggtagcc tgctttacgg gcttcggatt tttcagcggt tttttcggga agctgtacac
     9721 agatatagcg gcggttaccg ttttgtcctt cggcgttaag ctgcatcacg gcgtgggcgg
     9781 ttgtgccgct gcctgcgaag aagtctagga ttaggtcagt ttgatttccc ttgaaagttg
     9841 cagaaagaac taatcttttc aataaatcta atggttttgg tgtttcaaaa ggagaataac
     9901 cttttccagt ttcaaacaac tcttctaatt cacgaatacc atctttagta agatttttac
     9961 ttatatttcc aatatttaag atgctatgaa atttggaaaa atcatcggat acttttctaa
    10021 gttttccaat aattgttttc ccataagact tcggaattaa gatatattca ttattttcaa
    10081 tatctttatc aattttgttt ttaaactcaa ttccttttat ttcaataata tcttcgtaat
    10141 gcaagttccc atatttgcca aactgttcgc gaacggcatc ttcctgtatc caatataatt
    10201 catcattgat tacaattttt ttgccgcgta tatcttttgg tctttttaga ttgtcaaaat
    10261 gagtaatatc tttcgcataa actaaaacag tttcatgccc atttacaaca tattttgcat
    10321 taccaccacc ttctgatgta ttaacaatta aatctttaat aaaattccct tccccaaaca
    10381 cttcatcaca caacaacttc aactgcgccg cttcgttatc gtcaatcgag ataaaaatca
    10441 cgccgtcgtc ctttaacagt tcgcgggcga tatacaggcg cggatacata aaggtcaacc
    10501 atgcactgtg cgagtttgag cctttgtcgg tgaaatctaa aatccgcgcg gcttcgtctt
    10561 cgtcaatatt ggctaagcag gcaagttcgg ctggtgtgaa tttgcggtcg tcctgataga
    10621 caaagccgtc tgatccggtg ttgtagggcg ggtcgatgta aatcatcttc acgctgtttg
    10681 tgtaggcgtt ttttaagtgt ttcaacactt ctagattgtc gccacgaatc agtaggtttt
    10741 ggctgcctgc attttcgggt ttggcgttgt gcgtcttgtc ttcacttatc agggtttcgg
    10801 gcggcaggtt gcgaagcagg cgagcatatg atttgcccag ccagttcatt tcgtaaaatt
    10861 cgcgtccgat gtcggtctgt ggcgcaattt cggcttgtaa tctgtcgata aggaaatttc
    10921 cgtctgcgtc aaaacaggcg ggaaacagtt ttttgagctg ttcgagttgg gtagagttg
//
LOCUS       DBBZXW010000060        10392 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.060, whole genome shotgun sequence.
ACCESSION   DBBZXW010000060 DBBZXW010000000
VERSION     DBBZXW010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10392
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.060"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            46..285
                     /locus_tag="ACJJD2_001406"
     CDS             46..285
                     /locus_tag="ACJJD2_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579930.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
     gene            499..1800
                     /gene="bioA"
                     /locus_tag="ACJJD2_001407"
     CDS             499..1800
                     /gene="bioA"
                     /locus_tag="ACJJD2_001407"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HGG7579931.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLVDGMSSWWCAIHGYNHPVLNQAVETQIKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYRQVRGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPTSRFDDEWDEADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1797..2444
                     /gene="bioD"
                     /locus_tag="ACJJD2_001408"
     CDS             1797..2444
                     /gene="bioD"
                     /locus_tag="ACJJD2_001408"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HGG7579932.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADKQGLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QQLAAQYEIVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLIFNHIHDSSDECVAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2459..2935
                     /locus_tag="ACJJD2_001409"
     CDS             2459..2935
                     /locus_tag="ACJJD2_001409"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HGG7579933.1"
                     /translation="MEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVFGEGCGRYFAARRSRFSHHGEEMLLTEYFLPELKRFIG"
     gene            2965..3855
                     /gene="ubiA"
                     /locus_tag="ACJJD2_001410"
     CDS             2965..3855
                     /gene="ubiA"
                     /locus_tag="ACJJD2_001410"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HGG7579934.1"
                     /translation="MNPKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            4040..4489
                     /gene="ptsN"
                     /locus_tag="ACJJD2_001411"
     CDS             4040..4489
                     /gene="ptsN"
                     /locus_tag="ACJJD2_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HGG7579935.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            4493..5455
                     /gene="hprK"
                     /locus_tag="ACJJD2_001412"
     CDS             4493..5455
                     /gene="hprK"
                     /locus_tag="ACJJD2_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HGG7579936.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            5436..6290
                     /gene="rapZ"
                     /locus_tag="ACJJD2_001413"
     CDS             5436..6290
                     /gene="rapZ"
                     /locus_tag="ACJJD2_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HGG7579937.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIAYLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLPSR"
     gene            6372..7313
                     /gene="ylqF"
                     /locus_tag="ACJJD2_001414"
     CDS             6372..7313
                     /gene="ylqF"
                     /locus_tag="ACJJD2_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HGG7579938.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGSVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPADE"
     gene            complement(7404..7524)
                     /locus_tag="ACJJD2_001415"
                     /pseudo
     CDS             complement(7404..7524)
                     /locus_tag="ACJJD2_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7588..8190
                     /locus_tag="ACJJD2_001416"
     CDS             7588..8190
                     /locus_tag="ACJJD2_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HGG7579939.1"
                     /translation="MTEKLPPDALIEAALLTQAEPLNEKTMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            8374..10047
                     /gene="recN"
                     /locus_tag="ACJJD2_001417"
     CDS             8374..10047
                     /gene="recN"
                     /locus_tag="ACJJD2_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HGG7579940.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKSVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSREQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRSLGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDKIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            10157..10233
                     /locus_tag="ACJJD2_001418"
     tRNA            10157..10233
                     /locus_tag="ACJJD2_001418"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10191..10193,aa:Arg,seq:acg)
     gene            10251..10325
                     /locus_tag="ACJJD2_001419"
     tRNA            10251..10325
                     /locus_tag="ACJJD2_001419"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10284..10286,aa:Glu,seq:ttc)
BASE COUNT         2518 a         2594 c         2834 g         2446 t
ORIGIN      
        1 ggctgtaacc ttcaatcgga atttgttgcc tgcgggatat gcggtatgaa tgtttgggat
       61 atatggggca ggatggtgga aatctatcat aagtataaga agccgtgcct ggttttggcg
      121 gtggattttg tgatgggtat ggtattcata gagccgaatg aggagccgtg catcggcaga
      181 tgctatgcgc ctatgtcgga gtcccctgat tttgccaacg ctgttgcgat ggctgttgct
      241 atgatctgta tcgtatggat tgccgttttg tctatgactg attgaagcgt tgggcggagg
      301 ctgcgtgaaa cggtattggg cgttgggccg tctgattcca atcgggcttg aggaatgcga
      361 aacggtgtgc gcttatgttg cggaacgatt tgtttcgcgg ttttgcgccc gaaacggatg
      421 gagaggtgtg ggaaacggtc tgtcggagta gaatacgcgt ttgcgtttga atgcagcaat
      481 aagaaaagag agaaacttat gccgtctgaa catcaacaca catcatcatt acttgatttc
      541 gaccgtaccc atctgctcca tccctatact tccatgaccg atccgcttcc cgtttatcct
      601 gtcaaacgtg cagaaggggt gtttatcgaa ttggcggacg gcacgcggct ggttgacggg
      661 atgtcgtcct ggtggtgtgc gatacacggt tacaatcatc ctgttttgaa tcaggcggtt
      721 gagacgcaga ttaaacaaat gtcgcatgtg atgttcggcg gtttgacgca tgagcctgcg
      781 gtggagctgg gtaaattgtt ggttgggatt ttgccgcagg ggttggaccg tattttttat
      841 gcggattcag gttcggtttc ggtggaagtt gcgttgaaaa tggcggtgca ataccggcag
      901 gtgcgggggt tgacggcgaa gcagaatatt gcgacggtgc ggcgcgggta tcacggcgat
      961 acttggaacg cgatgtccgt ctgcgatccg gaaacgggga tgcaccatat tttcggcagc
     1021 gcgttgccgc agcgttattt tgtcgataac ccgacaagcc gtttcgacga tgaatgggac
     1081 gaggcggatt tgcagcctgt ccgcgccttg tttgaagtgc atcatgcgga tattgccgcc
     1141 tttattttag agccggtcgt gcagggcgcg ggcggcatgt atttttatca tccgcagtat
     1201 cttcgcggat tgcgcgattt gtgcgacgag tttgatatcg ttttgatttt tgatgaaatc
     1261 gccaccggat tcgggcgcac gggcaagatg tttgcctgcg aacacgcgga ggtcgtgccg
     1321 gatattatgt gcatcggcaa gggtttgagc ggcggctata tgacgctggc ggcagcaatc
     1381 acttcgcaaa aagttaccga aacgatttcg cgcggcgaag cgggcgtgtt tatgcacggc
     1441 ccgacgttta tggcaaaccc gctggcgtgt gccgttgcct gcgcttcggt caaactgctt
     1501 ttgtctcaag actggcaggc aaatatccgc cgcattgaaa gcatcttaaa aggccgtctg
     1561 aaagccgcgt gggacattcg cggcgtgaaa gacgtacgcg ttttgggtgc catcggcgtg
     1621 atcgagctgg ataaaggcgt ggatatggcg cgttttcaag cagattgcgt ggcgcagggc
     1681 atttgggtgc gcccgttcgg caggctggta tatctgatgc cgccgtatat tatttcagac
     1741 ggcgttttga ccaaacttgc cgacaaaacc gtgcaaatct tgaaggaaca cagcaaatga
     1801 aaggcgttta cttcgtcagc ggcatagaca cggacatcgg caaaactgtc gccaccggta
     1861 tgttggcaaa acaattgttg cagcagggca aaagcgtgat cacgcaaaag cccgtgcaaa
     1921 ccggttgcca agacatcgcc gaagacatcg ccgttcaccg caaaatcatg ggcatcccga
     1981 tgcaggaagc ggacaaacaa gggctgacca tgcctgaaat cttcagttat ccagcttcgc
     2041 ctcatctcgc tgcccgtctt gacggcaggg ctttggactt ggacaaaatc cgcaccgcca
     2101 cgcagcaact ggcggcgcaa tacgaaatcg tcttggtcga aggcgcgggc ggattgatgg
     2161 ttccgctgac ggaaaacctg ttaaccattg attatatccg tcagcaaggc tatcccgtca
     2221 tcctcgttac cagcggacgg cttggcagta tcaaccacac tttactcagt ttcgccgcgc
     2281 tcaaacaata cggcatccgc ctgcacagcc tgattttcaa ccatattcac gacagttccg
     2341 acgaatgtgt cgcccaagac agcctgagct acttgaaatg ccgtctgaaa gccgattttt
     2401 ccgaagcgga atggatggag ttggcaaaaa cagacgcggt ataaagattg ggaaaaatat
     2461 ggaacaccta tttgggaaat ggctgcccga cttgcccacc cccatttcag acggcatcag
     2521 cctgccgatg gtgcggctgc tgcacacccg gtcgctgacc gccgcattgc gcgccttgcc
     2581 gcatacattt tcggtggaac tgctgaaact gggcgaattg gagacggaat gcggagggag
     2641 gctggtgcgc gaagttttgt tgaagctgga cggtatccct gttgtcgcgg caaggagcga
     2701 gtgccggata ggttcggcgt tttggcaaaa cattttggac tgcggcacgc gtcctttggg
     2761 cgaacgtctg tttcaagccg atttggaagg ggcgcgttcg gcgtttgagt ttgccgtttt
     2821 cggcgaagga tgcggacggt actttgccgc tcggcgttcg cggttttccc atcacggcga
     2881 ggaaatgctg ctgaccgagt attttctgcc cgaactgaaa cgctttatcg gataaaatac
     2941 cgttttttca agctgcgcgg caatatgaat cctaaatccc ctttattttt acgcctgtcc
     3001 gatcgtttgg acgtttatat cagactgatg cgggcggaca agcccattgg gacgctgctt
     3061 ttgctgtggc cgacctactg ggcgttgtgg ctggcttcag acggtattcc cgatttggcg
     3121 gtattggcgg cgtttacaat cggcacgttt ttaatgcgca gtgccggctg cgtcatcaac
     3181 gattttgccg accgcgattt tgacggggct gtcgagcgca ctaaaaaccg tccgttcgca
     3241 cagggcaggg tcaagaaaaa agaagcgctg ctgctgacgg catttttgtg cctgcttgcc
     3301 gcattgtgcc tgattccgct gaatcatctg acatggctga tgagcctgcc cgcgctgttt
     3361 cttgcgctga cttacccgtt taccaaacgc ttttttccga ttccccaact ctatctcggg
     3421 cttgcctttt ccttcggtat cccgatggcg tttgccgccg ttgccggaaa cgtgccgcct
     3481 caagcgtgga tactctttgc cgccaatgtg ttatggactc tggcgtatga cacggtttat
     3541 gcaatggcgg acaaagaaga cgatttgaaa atcggcatca aaacctccgc cgtcacgttc
     3601 gggcgttacg acatcgccgc tgttatgctg tgtcatggcg gctttaccct gctgatggca
     3661 gtattggggg cggttatcgg tgcggcatgg gcatattgga cggcaatccc catcgtcctg
     3721 ctgctgcaat accgccaata tgccgccatc aaaagccgcg tccggcaaat ctgttttgaa
     3781 acgtttttgg caaacaacag aattggttgg gtgtggttta ccgccatttt tgcccatacg
     3841 tttttcgcga aataaggcag ggcaatgccg tctgaagagc cgtaaactgc tttggacggc
     3901 atttctatct gtgccgaaaa gcgttaaaat atgtttttaa aacgctgtgt tatgtcagcc
     3961 cgtaccgtat gcgggattga gatttgcccc ggcagtcggt acaatctttc tgttttgcga
     4021 tgtctgaaaa gagaagctta tgagccttat cggcgaaatt ttgcctttgt cccatattgt
     4081 tttggatatg gaggtgggca gtaaaaaaag gctgtttgag gaagcaggcc tgcttttgga
     4141 acgcgaatcc tcattgtccc atgctgatgt tttcgaatgt ctttttgccc gtgaaaaact
     4201 cggttcgacc ggtttggggc agggcgttgc catcccgcac ggccgtcatg ccggcgtgaa
     4261 gcaggcgacg ggcgcgttca tccgcacgcg cgaacccgtc ggatttgacg caccggacgg
     4321 caaaccggtt tccctggttt ttatcttgct ggttcctgag aatgcaacgg gcgagcattt
     4381 ggaggtattg tccaaactgg ccggcaagtt ttcccaaaaa agcatccgcg aatcgctgat
     4441 gacggtttct tctgcggaag aagcccgcgc catcctgacc gaagaataaa atatgcccag
     4501 tatctctgtc cgccgactgt ttgacgacaa ccaatacaag ttgcaacttg cctgggccgc
     4561 cggcaattcg ggtgcggaca accgtatcgg cgtagaggcg gacaagcccg tcctcgcttt
     4621 ggtcggacac ctgaatttca tccaccccaa ccaaatccaa gtggtcggtt tggcggagtc
     4681 ggaatatctg aaccgtctcg aatcggggga aacgggttat cagttcggcg acctgttcga
     4741 catttctatg tctttggtta ttgtggcaaa cggcttgccg gtttccccgg gactgcgcga
     4801 ctactgccat aaaaacgata ttccactgct gacttccaaa ctcgaaagcc cctatctgat
     4861 ggacgtgttg cggatttacc tgcaacgcac cctggcggca tcgtccgtca aacacggcgt
     4921 atttctcgat gtgtttgaaa tcggcgtgct gattaccgga cattcgggtt tgggtaagag
     4981 cgaattggcg ttggagctga tttcgcgcgg ccacagcctg attgccgacg atgcggtcga
     5041 gctgttccgc atcggcccgg aaacgctgga agggcggtgt tcgcctatgc tgcgcgattt
     5101 tttggaagtg cgcggcttgg ggatactcaa tatccgccat attttcggcg aaacttccat
     5161 ccgccccaaa aaaatcctgc aactcattat caatttggtc gaggcagacg acgagtatat
     5221 gaagcagctc gaccggttga gtatccgcac cgaaaccgaa tccatcctca acgtcaacgt
     5281 ccgttcggta acgctgcctg tcgcggtcgg acgcaacctt gccgtattgg ttgaagcggc
     5341 ggtacgcaat tacattttgc agttgcgcgg taaggacagt acgcgcgaat ttttggaacg
     5401 ccatcagacg caacttaaag aaaacgaaca gaatcatgaa aatcgtcctg attagcgggt
     5461 tgtccggttc gggcaaatcc gtcgcactgc gccaaatgga agattcgggt tatttctgcg
     5521 tggacaattt gcctttggaa atgttgcccg cgctggtgtc gtatcatatc gagcgtgcgg
     5581 acgaaaccga attggcggtc agcgtcgatg tgcgttccgg cattgacatc ggacaggcgc
     5641 gggaacagat tgcctatctg cgcggactgg ggcacagggt tgaagttttg tttgtcgagg
     5701 cggaagaaag cgtgttggtc cgccggtttt ccgagaccag gcgaggacat cctctgagca
     5761 atcaggatat gaccctgttg gaaagcttaa agaaagaacg ggaatggctg tttccgctta
     5821 aggaaatcgc ctactgtatc gacacttcca agatgaatgc ccaacagctc cgccatgcag
     5881 tccggcagtg gctgaaggtc gaacgtaccg ggctgctggt aattttggag tccttcgggt
     5941 tcaaatacgg tgtgccgaac aacgcggatt ttatgttcga tatgcgcagt ctgcccaacc
     6001 cgtattacga tcccgagttg aggccttaca ccggtatgga caagcccgtt tgggattatt
     6061 tggacggaca gccgcttgtg caggaaatgg ttgacgacat cgaaaggttt gttacgcatt
     6121 ggttaccgcg tttggaggat gaaagcagga gctacgttac cgtcgccatc ggttgcacgg
     6181 gaggacagca ccgttcggtc tatattgtcg aaaaactcgc ccgaaggttg aaagggcgtt
     6241 atgaattgct gatacggcac agacaggcgc aaaacctgcc gagccgttaa tcccattaaa
     6301 caattatgcc gtctgaaacc ccgcttttct gtttcagacg gcatttcaaa tattgagaag
     6361 aaaggaaaga tatggcaatc caatggtttc ccggtcatat gaacaaggcg aaaaaagcca
     6421 tcgccgagcg tgcaaaaagc gttgatatgg tgattgaaat gctggacgcg cgtatgcccg
     6481 cctccagcga aaaccccctg cttgcccagc tttccaaagg caaacccaaa cttaaaatcc
     6541 taaacaaaca agatcttgcc gaccccgaac gcacaaaggt ctggcttgac cactacaaca
     6601 gccgccccga cacgcgcgcc attgccctcg attcctccga aaccggcgca cacggcaaaa
     6661 tcacccaagc ctgccgcgcg atgattcccc accggcaagg catagacaaa cccttgcgcg
     6721 tcttgatttg cggcattccc aacgtcggca aatccaccct catcaacggc atgataggca
     6781 aaaaatccgc caaaaccggc aacgaacccg gcatcaccaa agccgaacaa cgccttttcc
     6841 ttgccgacga cttctggctg tacgacaccc ccggaatgct gtggccgaaa atcattgtcg
     6901 aagaaagcgg ctacaacctc gccgccggcg gttcagtcgg acgcaacgca ttggacgaag
     6961 aagaagtcgc cctcgaactt ttagactacc tccgccgcca ctacctccct atgttgcaag
     7021 aacgctacca agccgacaaa gaccccagca gccactggga cgaaaacgtt tggctcgaat
     7081 ggatagccaa aaaacgcggc gcagtcctca gcggcggacg gatcaactac caaaaagccg
     7141 ccgaaaacat ccttaccgac ttccgtgaag gcaaaatcgg cagaatcacc ctcgaaacgc
     7201 cgaaccaatg ggaaacttgg ctcaaaaaag cccgtcagaa agaagccgaa ctcaaagcca
     7261 tacgcgaagc cagaaaagca gagcgtaaag ggcagaagcc tgcggacgag tagggcggta
     7321 tagtggaatg ccaaaagagg tttcactatc ttcaaacagg tcgtctgaaa cctcagaata
     7381 aatttttcag acgacctgtt tgtaaaattt aaaaccaaca tatatagtgg attaacttta
     7441 aaccagtacg gcgttgcctt gccgtactat ctgtactgtc tgcggcttcg tcgccttgtc
     7501 ctgatttaaa gttaatccac tataaaactg aaagaaccct tatccaaggc tgtctgaaaa
     7561 atatttaaac tattaaatcc ggatgttatg actgaaaaac tccctcctga tgcgctgatt
     7621 gaagccgcgc ttttgactca agccgaacct ttaaacgaaa agaccatgcg cgaattgtgt
     7681 gtgccgccgt tgtcgcaaga caaactgatt gatgtgttgg cgcagttgaa aacgcgttgg
     7741 caggataggg cgttgcaact ggtgcatacg caagagggct ggcgttttca gattgttcag
     7801 acggcattcg agcggctggg cagcctgcaa gaacagcgtg cgccgcgcta ctcccgcgcc
     7861 gtgatggaaa cactggcgat tatcgcctac cagcagcccg taacgcgcgg cgacatcgag
     7921 ggcatacgcg gcgtggcggt gtcgcagaac gtgatgcaga ccttgcagga tcgggggtgg
     7981 attgaagtca tcggacatcg ggacacattg ggaaaacccg cattgtgggc aacaacggca
     8041 acgtttctca gcgatttgcg cttggacggt ctggaagaac ttccgccgct gaccgaactg
     8101 ggcgaactgg ttttacccga tttaatggaa atgccgccta cggatgaaga agagccggaa
     8161 gccgtaccgt ccgataccct gcccaactga aattccaaat gccgtctgaa acgcacattg
     8221 cttcagacgg cattgcaaca aataagcaga taaaaacaag tactaagcaa aattaaggaa
     8281 aacttatttt taatttaaaa aaatcttagt tataattcgt atatctaaag ttgatattgc
     8341 ttttgtcggt agaattgcta aggaatcctc acaatgcttc taacactttc tttgcgtgat
     8401 tttgtcattg ttgaaaatct gaatctggat tttcaaagcg gctttaccgt attgaccgga
     8461 gaaaccggcg cgggcaagtc cattactttg gatgcgattg gtctgctgtt gggcgacaaa
     8521 gccgattaca gccaagtccg cagcggtgca aaagaagcgc agttgtcggc attgttcgat
     8581 atttcccatt tgcctgtttt aaaagcagaa ttgtatgaac aggggctttt aaacgacgga
     8641 gaagaagaac tcagtatccg ccgcattatc gatgccaaag gcaaaagccg cagctttatc
     8701 aacaatcagg ccgctacctt ggcgcaactc aaatccgtcg gtagccagct tatcgacatc
     8761 cacgggcaaa acgcccatca ttcgcttaat caggaagccg cccagcgcga attgttggac
     8821 gcatttgcgg gtagcaggga gcaggcggaa accgtcaggc agctttatca aaattgggcc
     8881 aatgcgaaaa aagccctcca agaggcgcag gaacacgccg atgccgtcat tatcgagcgg
     8941 gagcgtctgg aatggcagtt taacgaactg aatcagttgg acattaaaca aggcgaatgg
     9001 gaagccctca gccaaagcca cgacagcctt gcccattctg ccgagctgtt gcaggctgcc
     9061 gaagaagtcg gaagcaagat tgacggcgac aacggcatcc aacgccatat ctatcaatgt
     9121 caaaaactat tggccaatct gcaaaacatc gagccgcgct ttgccgagag cctgaatatg
     9181 ttggcaagca tcgaagccga attgggcgaa atcagtgcca atatgcgcga tgtggcaggt
     9241 cgcagcgaca tcaatcccaa tgaattggcg gcacaggaac agcgcatggg cgaactgatg
     9301 gggatggcgc ggaaataccg gatcgagcct gaagagttgc ctgccaagtt ggcagaaatc
     9361 gaagaacgcc tgcaaagcct gcaagctgcc gccgatttgg acgcgctcga gcataatgtt
     9421 gcccacaatt ttgccgaata tcaggaagct gcccacatcc tttctgccat gcgccatcag
     9481 gcggcagagc gtttgagcgg cgaaacgacc gagcatatgc aacaccttgc catgaaaggt
     9541 gcacgtttcg acatcgtcct gttgccctcg tcgccgacgg cacatggttt ggagcaggtt
     9601 caatttcaag ttgccgccaa caaaggcaat ccgccccgtc cgctgaataa agttgcctcc
     9661 ggcggcgaat tggcgcgtat cagccttgcc ttacaggttg ttgccagcca atatacccaa
     9721 gttcccaccc tgatttttga tgaggtcgat accggtattg gagggggagt ggctgaaatg
     9781 gtcggcaagg cattacgttc gttgggcaga aaacatcagg tgcttgccgt tacccatctt
     9841 ccgcaagtcg catcctgcgg cgaaaaccac tggcgggtgc gcaagcacag cgagggagag
     9901 caaaccgtca gcgaaatcag tatattggat aaaatccaac gggtcgaaga ggttgcccgt
     9961 atgttgggcg gagaagtcat taccgatacg acgcggcaac atgcggcaga attgctgcaa
    10021 cttgcgtcga aaaatagttt attttaaaat caatcagtta aaaaataact aaaaataaaa
    10081 gtctaaaaca atagacagaa ctcagataaa tccgtattat cacgctttct taatcacttg
    10141 aacaagtgat tgtgctgcac ccgtagctca gttggataga gtatctggct acgaaccaga
    10201 gggtcgggcg ttcgaatcgc tccgggtgcg ccagtaagaa aatacaatat gcgcccatcg
    10261 tctagcggtt aggacatcgc cctttcacgg cggtaaccgg ggttcgattc cccgtgggcg
    10321 tgccaattca aaatgcctcc gattatatcg gaggcatttc tcatttctca tttctcattt
    10381 ctcatttctc at
//
LOCUS       DBBZXW010000061        10354 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.061, whole genome shotgun sequence.
ACCESSION   DBBZXW010000061 DBBZXW010000000
VERSION     DBBZXW010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10354
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.061"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..144
                     /locus_tag="ACJJD2_001420"
     CDS             <1..144
                     /locus_tag="ACJJD2_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HGG7579941.1"
                     /translation="NVGIGSGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRH
                     IRT"
     gene            273..1709
                     /locus_tag="ACJJD2_001421"
     CDS             273..1709
                     /locus_tag="ACJJD2_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HGG7579942.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGQGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLGGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RALNIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLSFVVFNTASPD
                     DAGAVFNALFANANGWNAPQQANMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1720..2703
                     /gene="patB"
                     /locus_tag="ACJJD2_001422"
     CDS             1720..2703
                     /gene="patB"
                     /locus_tag="ACJJD2_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HGG7579943.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYTFSDGIKAFLSGETPSTAQGGGSADMPSEAAASEAVPQTGKT
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2700..3893
                     /locus_tag="ACJJD2_001423"
     CDS             2700..3893
                     /locus_tag="ACJJD2_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HGG7579944.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKIRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(3953..4129)
                     /locus_tag="ACJJD2_001424"
     CDS             complement(3953..4129)
                     /locus_tag="ACJJD2_001424"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579945.1"
                     /translation="MPSENGRRQFIIFAFRRHIKRRLCAVCRRFACVLPMPEANAGCI
                     WQTVRGVAMPSEAI"
     gene            4180..5733
                     /locus_tag="ACJJD2_001425"
     CDS             4180..5733
                     /locus_tag="ACJJD2_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HGG7579946.1"
                     /translation="MNRTYANFYEMLTTACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASVGLSKELAGLKAQTPIEKIIWTGKSRPVGETAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQTLLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(5824..7851)
                     /locus_tag="ACJJD2_001426"
     CDS             complement(5824..7851)
                     /locus_tag="ACJJD2_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HGG7579947.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEVIFTEFGWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            8140..10146
                     /locus_tag="ACJJD2_001427"
     CDS             8140..10146
                     /locus_tag="ACJJD2_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HGG7579948.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRLPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLTIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            10288..>10354
                     /locus_tag="ACJJD2_001428"
     CDS             10288..>10354
                     /locus_tag="ACJJD2_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7579949.1"
                     /translation="MLPSKYEDNALQIKEKSTERTA"
BASE COUNT         2493 a         3225 c         2500 g         2136 t
ORIGIN      
        1 aacgtcggta tcggcagcgg cgcactgttg ggacattggg taacgcaata tgtcggtatt
       61 tcccgtatcg gcatcgccgg tatgcttgcg gcggcggccg ggctgtggct gtgcctgaac
      121 ttgaaccgcc atatccgaac ctgacccgct atgccgtcta aagcctctcc cgcccttcag
      181 acggcatttt gattgaagaa atatccgccc ctgcttaaaa taacgggctt tgccgtgttt
      241 taacgcctat tttcttattc caaggatggt ttatgccgct gctgtctgtc gagttcgcac
      301 tgttctttct cgccttcctg ccgatttact ggggcttggc gaaatacccg tccgtccaaa
      361 acctgctgct tttggctgcc ggtatgggct ggctctacca tatcggcccc gtatttgcgg
      421 caatcgtcgt cctttattcc tcctgcgtgt accttttggg cgaactgctc cgttccgatc
      481 gcgaaaatac gcgccgcttt tggctggggt gcggcattgc cgtctcgctg accgtcttgg
      541 gctttttcaa atatttcgac tttttccgcc cgctgattgc acaatatgcc ggacaaggcg
      601 gcgcaatcga catcctgatg ccgctggggc tttcgtatta caccttccag tcgctcgcct
      661 atctggttta ctgcttccgc gccccgcacg ccgcgcgttt cgagtggcac gagctgctgc
      721 tgcacctgag ttttttcccc accgttacct ccggcccgat tatccgcgcc gccgcattca
      781 aaagcgcaga cggcgagcag gcgggcgcat tggcgcaaat ccgtacccgc caaccgcgct
      841 cacccgtccg ccccgcactc gccgtttccc tgattctgct gggtattgcc aaaaaatggt
      901 ggctggcggg gatgctggcg gaaaactggg tgtcgcccgt atttgaaaat cccgcccaat
      961 tcgacggctg gggcgtattg ggcggcgtgt acggctatac cttccaactc tttttagact
     1021 tttccggata ttccgatttg gttatcggca tggcgatgct gctgggtttc cggctgccca
     1081 aaaacttctc cgcaccgctt cgtgctttaa acatccgcgc attttgggac aaatggcaca
     1141 tcagcctttc cacctggata cgcgactaca tctacatccc cttgggcggc agcaaaaaag
     1201 gctttttacg gacacagctc aacctgatgg cggcaatggt actctcaggc atctggcacg
     1261 gctacggctg gaacttcctc atttggggcg cgctgcacgg cacggcactg gtgctgctca
     1321 acacgggcga tcgctatttc ggacgcaacg cgctatgccg tctgaaatac cttgcgccgc
     1381 tctcgtggtt tgttaccttc catttcgtct gccttagctt tgttgtcttc aataccgcaa
     1441 gccccgacga tgcaggcgca gttttcaatg ccctctttgc caatgccaac ggctggaatg
     1501 cgccgcaaca ggcaaacatg ctgctgcttg cctcgtttgc atccgtgatg ctgctctacc
     1561 cttacctgca acgcgctttc gacggcgcgg tcaaaggttt ggaaaaaatc ccgatgtggc
     1621 tgtggtttat ccccgtttcc gccgtcctgc tgctgattat cgtattggcc ccctcgggga
     1681 ttcccggctt tatttatgcc aatttttaag ggtttggaca tgaaaaactt tctttccctt
     1741 ttcgcctcca tactgatgtc tgccctgatt gccgtgtggt tcagccaaaa ccccatcaac
     1801 gcctactggc agcagaccta ccaccgcaac agtccgctcg aaccgcttgc cgcctacgga
     1861 tggtggcgga gcggtgcggc gttgcaagaa aacgcctaca ccttttcaga cggcatcaaa
     1921 gccttcctgt ccggcgaaac gccgtcgacg gctcaaggcg gcggttcggc agatatgccg
     1981 tctgaagccg ccgcatcaga agccgtccct caaaccggta aaacagaatg gaaacaagac
     2041 accgaagccg ccgccgtccg cagcggcgac aaagtctttt ttgccggcga ctcgctgatg
     2101 cagggcgttg cacccttcgt gcaaaaaagc ctgaaacagc aatacggcat cgaatccgtc
     2161 aacctcagca aacaaagcac ggggctgtcc tacccctcat tcttcgactg gccgaaaacg
     2221 attgaagaaa ccctgaaaaa acatcccgaa atcagcgtgc tcgccgtctt cctcggcccg
     2281 aacgacccgt gggatttccc cgtcggcaaa cgatacctca aattcgcttc cgacgaatgg
     2341 gcgcaagaat acctgaaacg cgtcgaccgc atccttgaag ccgcacacac gcaccgcgtc
     2401 caagtcgtct ggctcggcat cccctatatg aaaaaagcca agctcgacgg gcagatgcgc
     2461 tacctcgaca aactgctttc ggaacacctg gaaggcaaaa tcatcctgat tcccaccgcg
     2521 cacaccctga gcggcgggga agaccgctac accgactccg tcaacgtcaa cggcaaaccc
     2581 gtccgctacc gcagcaagga cggcatacac tttaccgccg aaggacaaaa actgctggcg
     2641 gcaaaaataa tggaaaaaat cgtttttgaa ccaagtacgc aaccatcaag tacacagcca
     2701 tgaaccccaa acacctcatc gcattttccg ccctgttcgc cgccacgcag gcagaagccc
     2761 tgcccgtcgc ctccgtcagc ctcgacaccg ttaccgtttc cccgtccgcc ccctacaccg
     2821 atacaaacgg gctcttgacc gactacggca acgccgccgc ctcgccttgg atgaaaaaaa
     2881 tccgatccgt cgcacaaggc agcggcgaga ccttccgcat cctgcaaatc ggcgactcgc
     2941 ataccgccgg cgacttcttt accgacagcc tgcgcaaacg cctgcaaaaa acttggggcg
     3001 acggcggcat aggctgggtt taccccgcca acgtcaaagg gcagcgcatg gcggcagtcc
     3061 ggcacaacgg caactggcaa agcctcacca gcaggaacaa tagcggagac ttcccgctcg
     3121 gcggcatcct cgcccacacc ggcagcggcg gcagcatgac cctgaccgca tcggacggca
     3181 agaccggcaa acagcgcatt tccctgtttg ccaaacccct gctcgccgaa caaaccctga
     3241 ccgtcaacgg caacaccgtc tccgccaacg gcggcggctg gcaggtactg gatacccgcg
     3301 cggcactgcc cttgaccata cagaccgaaa tgccgtggga catcggcttc atcaacatcg
     3361 aaaatcccgc cggcggcatt accgtttccg ccatgggcat caacggcgca caattgaccc
     3421 attggtcgaa atggcgtgcc gaccgtatga acgaccttgc ccaaaccggc gccgatttgg
     3481 ttatcctttc ctacggcacc aacgaagcct tcggcgacaa catcgacatt gccgacaccg
     3541 aacaaaaatg gctggatacc gtccgccaaa tccgcgacag cctgcctgcc gccggcatcc
     3601 tcatcatcgg cgcacccgaa tccctgaaaa acacgctcgg cgtatgcggc acacgccccg
     3661 tccgcctgac cgaagtccaa cagatgcagc ggcgcgtcgc ccgacagggg cagacgatgt
     3721 tctggtcttg gcaaaacgcc atgggcggca tatgcagcat gaaaaactgg ctcaaccaag
     3781 gatgggccgc caaagacggc gtacacttct ccgccaaagg ctaccggcgc gcggcggaaa
     3841 tgctcgccga cagcctcgaa gaactcgtcc gcgccgccgc aatcaggcaa taatcggaca
     3901 gggggcggac ggtatttccg caacaggggg atgccgtctg aaacgcatac cttcatattg
     3961 cttcagacgg catagccacc ccgcgcacgg tttgccagat gcaaccggca ttcgcctcag
     4021 gcatcggaag gacgcaggcg aacctccggc atacggcgca aaggcggcgt ttgatatgcc
     4081 gtctgaaggc aaagatgata aactgccgcc ttccgttttc agacggcata ttgttttcaa
     4141 atgagggcgt tcgccgtccg caaccataaa ggaagtttca tgaaccggac ttatgccaat
     4201 ttctacgaaa tgctgaccac cgcctgccgc aaaaacggca acggcacggc agtgttcgac
     4261 ggcaaggaaa aaaccgccta ccgcgcgctc aagcaggagg ccgaagccgt cgcggcgtat
     4321 ctgcaaaata tcggcgtgaa gttcggcgac acggtcgcgc tggcggtttc caattccaca
     4381 gaatttatta ccgcctattt cgccatctcc gccatcggcg cggtcgccgt accgatgaac
     4441 acatttttga aaaacagcga atacgcgtat atcctgaacg actgcaaggc gcgcttcctg
     4501 ttcgcctcgg tcggcctgtc aaaagaattg gcgggcttga aggcgcaaac gcccatcgaa
     4561 aaaatcattt ggacgggcaa aagccggccg gtcggcgaaa cggcggaagg cgatgccttt
     4621 tttgaagacg tgcgccgctt ccccgaaaaa cccgacttgg gccgacaacc ccggataaat
     4681 gatttggcac acatcatcta cacctccggc acgacggggc atcccaaagg cgcgctaatc
     4741 agttacgcca acctgttcgc caacctgaac ggcatcgaac gcatctttaa aatttccaaa
     4801 cgcgaccgct ttatcgtttt cctgccgatg ttccacagct tcacgctgac ggctatggtg
     4861 ctgctgccga tttatatggc gtgttcgatt attttggtca aatccgtttt cccgttttcc
     4921 aatgttttga aacagaccct gctcaaacgc gcgaccgtgt ttttgggcat acccgcgatt
     4981 tacaccgcga tgagcaaggc gaaaatccct tggtatttca gatggttcaa ccgcattcgc
     5041 ctgtttatca gcggcggcgc gcctttggcg gaacaaacca tcctcgattt caaagccaag
     5101 ttcccccgcg ccaaattgct ggaaggctac ggactgagcg aagcctctcc cgtcgtcgcc
     5161 gtcaatacgc ccgagaggca aaaagcccgc agcgtcggca tccccctgcc cggtttggaa
     5221 gccaaagccg tcgatgaaga attggtcgaa gtgccgcgcg gcgaagtggg cgaactgatt
     5281 gtcaggggcg gttcggtgat gcggggctac ctcaatatgc ctgccgccac cgatgaaacc
     5341 atcgtcaacg gctggttgaa aacgggcgat ttcgttacca tagacgaaga cggcttcatc
     5401 tttatcgtcg accgcaaaaa agatttgatt atttccaaag gtcaaaatgt ctatccgcgc
     5461 gagatcgaag aagaaatcta caaactcgat gccgtcgaag ccgccgccgt catcggcgtg
     5521 aaagaccgtt atgccgacga ggaaatcgtc gccttcgtcc aattgaagga aggtatggat
     5581 ttgggcgaga acgaaatccg ccgccacctg cgtaccgtgc tggcaaattt caaaatcccc
     5641 aaacaaatcc actttaaaga cgggctgccg cgcaacgcta cgggcaaggt attgaaacgg
     5701 gtgttgaagg agcagtttga cggaaacaaa tgaacgccgt gccgtccgaa gccccgtccg
     5761 gcaaaaaaaa tgcggtgaat ctgcttcacc gcattttttt ggcaaacgcc ggagcgagga
     5821 tatttactct gccaattcca cctgctcgtg cgccatcagt tcctgaccga catcatccaa
     5881 caacatcaaa taacgttcgt agtttttcaa aatgtcggca atcagctcgt ccttgttcat
     5941 atactgcaca tcgtacccga cgcgcccgtc gaaaaaataa gcgtagggtt tgtaagttgt
     6001 ctgatgccgg atatgcggca gcttgccgtc gttaatcaac tggtcggata catcctgccc
     6061 gacagactta atcccgtaca taaaatcgcg catcgtctct ttccgaatga cgaactcgat
     6121 tgcgggctcg tcctgatgaa acatcttatc gacccggacg ctcaagccgt attcttccga
     6181 aagctcccgt tgcaactcgt gcatagcggg cgatgcggta tgtttgagga attttaaaat
     6241 atcctgctcc tgcgtctggc tcattatctg caccagccgt tctttccact tgccgcccgt
     6301 ccaaaataca ctggtagggt taacccgggt ctcaaaatat ttcttatccg cactcaagcc
     6361 tttccacagg ctgaaacaca ttatcagcat cagcagggca aacggcaggg aaacaatcag
     6421 ggtcatagac tgcaggttgc cgagtccgcc cgagcgcatc agcaaaacgg caacggcaga
     6481 catcagcacg ccccacataa ccgcctgcca ccgtggcgcg ctcaagcctt tgtcccgaga
     6541 ggtaatattg ttcaggacat aaatcccgga atcggcagaa gttacaaaaa acagagaaat
     6601 gaccagcagg ctgacgatgc tcgtcaattc gggcaggggg aggtaattaa agaatttaaa
     6661 aagcagcgtt tccggagagg aggtcatctt ttcgagcatt ccccccgcaa ccccgtcatt
     6721 cagccaaatc gccgtattgc cgaagacggt aaaccacaaa acgccgaaca ggccggggat
     6781 gagcaaaacc ccgaagacaa actcgcggat ggtgcgcccc tttgaaatgc gcgcgataaa
     6841 caaacccaca aacggcgccc aagaacacca ccacgcccaa taaagcaccg tccaagattc
     6901 aaaccacggc ttgtgttccc gttcgtacgc ataagtttta aaactgaggc gcaccagatt
     6961 tccgaggtag ttccctatgt tgtcgccgaa tgccgacaac aggtaaacag tgggacccgc
     7021 cgccaaaaca aaaaacagca gcaaaaacgc aaggctcagg ttcaactcgc tcaacacctt
     7081 cacgcccttc cccacgccgg atattgccga aacgacggcg agggacatga cggcggcgat
     7141 aatcaaaacc tgcacgctga agctgttttc ggcaatccag cccatttcct gcaatccggc
     7201 gcccagttgc gaagccccga accccaatgt ggtgatgatg ccgaaaaaag tagcaagcaa
     7261 cgccataata tcaatggcat cgccgaacct tccggaaatt ttttctttca acaggggata
     7321 aaaacaagaa cgcagggcaa gcggcagctt gtagcggaaa ccgaaataag ccaaagccaa
     7381 tgcaatcgta ccgtacaccg accaagcgtg aacgccccaa tggaacaccg tgtgcagcaa
     7441 tgcctgctgc tgcctgtgtt ccggcgtgcc ggccgtaatg tccgaaaaat aatgcatcaa
     7501 cggctctgcc acgccgaaaa acatcagacc cacgcccatc ccggccgcaa acagcatcgc
     7561 cagccacgac aggaagccga attccggcac atcttcatcc cgtccgagcc tgatgtttcc
     7621 caaactgctg accgagagta tcagcaggaa acccagaaaa atggaaaacg ttaaaacata
     7681 aaaccagccg aactcggtaa aaatgacttc ttttgcccga tcgagccaca tctgcacctg
     7741 atccggcacg gttaaaacca ataccaccaa aacacacaca aaaaacaaag tcgtcaaaat
     7801 aaccatcgga ttaaatgacg ttcggcgttc tataaattca gacagggaca aaccttctca
     7861 ctcctttgtt aaaaacagac aaacccggtc atcgggcaaa gcggtcaaaa cctgccgaca
     7921 aaataccggc ttccggatga cgaaatgcac aaaccggccg aaattgttat aatcgaaaaa
     7981 attaaaaatc aatacggatt attctatcag attgatttat cgatatttat tatatcatta
     8041 atatagtttg atttcaaacc ggcggaaaat gcgccgcctt ccgcaggcgc gccctccccg
     8101 ccatcggggc gtttaacgcc ggattgccga tgcggtacaa tggctgatat gaagaaaatt
     8161 acccctcaaa acctgcgccc cctgctttcg gaaagcttgg gacataccga ttttgtcaac
     8221 gtcctcaacg cactgattaa atttttgcgc cgtggcggca aaaaatgtgc gggggagcgt
     8281 ttcgacctga ttatcgacac attcaaacaa gacagggaat tgctgtcccg cttcagccgg
     8341 tgtttttaca tctggctcgc gcaaatacac atttatccgg cactcatcaa actcggcatc
     8401 ttctcgcgcc acagctttgc ccgagaaatg ggcatacgca tctacgaacg cttcagcccg
     8461 tcatataaag attttgccaa cttgggcgaa gtcttccttt atcttttcca ttccgaaaac
     8521 gacgacaaat ggctgcaaac gctcaatatc cgccaatggc tggttttata cgaactcatc
     8581 cggagccacg ccgagccgtc caaattgcag acggcgggca tccgccttgc cgatgcgcgt
     8641 ttgcgcgcca tcgaaatgct gtctgtctgg acggcatccg aagccatcga acccgacctc
     8701 atccgcatcg ccccgcgcct gctggaagcc gattcttcct tcgtcgccct ccaacgcgaa
     8761 accgccaaac tggtcgaaca ctaccgcaac ggcaccacgc cttacgacac cgcccacctc
     8821 gaagtgatgt tcgaccaatg tttcagccag attgactatt tgcgccgcaa agggacgggc
     8881 gccggctccg gttcgtcggt caaagtcgcc cacctgctcg aacggctccg gcagaccgta
     8941 gaccgtctaa agctgctcac cgacatccaa accggtgccg gcaacagcaa ccgcctgacc
     9001 atcgcgctga tgaactccct catctacgcg gcggtcgaac aatacagcac ccgccacctg
     9061 cgccgcagca gcatccgtat gctcgcccgc agcattaccg aaaacaaaag ccaccacggc
     9121 gaacactaca tcacccgcaa ccgcaaagaa tatttcaaaa tgttctactc ggcggcaggc
     9181 ggcggcatca tcatcgccct gatggcgctg ctcaaaatcc gcatcggcac actcggcctc
     9241 agccccttcc tgacttcctt gtcggctggg ttcaactacg gcatcggctt tatgatcatc
     9301 catatgctgc actgcaccgt cgccaccaag cagcccgcga tgactgccgc cagctttgcc
     9361 gaacaggtcg atctcaacga aggcggcaaa gcggtggaca acaaactcgc caagctcctc
     9421 atcgacgtat gccgctccca aagtgtcgcc gtcttcggca acgtttccat cgccatcctt
     9481 ttggcgtgcg ccatatcgtt cggctatgcc catctgtacc ggctgcccat actcgatgcc
     9541 cacaccgccg cctaccagtt caaatccata gacatcatcg cttacccgac gctgtggtat
     9601 gccgccattg caggtctgtg gctgttctgc tccggcatca tcgcaggttt tttcgacaac
     9661 cgcgccgact acctcaacct gcgccaacgc ctgcccttca accccttgct gcgtaaaatc
     9721 atgcgccccg ggccccgccg cgtcctcgcc gcctacatcc acaaacacta cggctcgttg
     9781 gtaggcaact tcatcttcgg gatgctcttg ggtatgaccg gctatttcgg acacctcctc
     9841 gggctgccgc tggacatccg ccacgtcgcc ttttcctccg ccaacctcgg ctatgccgcc
     9901 gtcagcggca acgtcggttt gggcacgttc gtactcggca ttttcagcgt cctcaccatc
     9961 ggcctggtca acctctgcgt cagtttcagc ctcgccctct tcgtcgccct gcgctcgcgc
    10021 ggcacgaaaa tcggcagcat ccgcaatctg attaagagtt tttggaatca gattaaaagc
    10081 aatccctgca tacttttcct cccgcccgcc aaagaacagg gacatcctcc ttcggacaag
    10141 ccttgaccgg caatgccgtc tgaagcgggc ttctccccga ataccgccct gatgcggaaa
    10201 atccccataa aaggatgcaa aaatgccgtc tgaaccgaaa cgtggttcag acggcatttt
    10261 aaaaggggct gtactagatt agcagatatg ttaccctcga aatatgaaga taacgcactg
    10321 caaattaaag aaaaaagtac agaaagaact gctc
//
LOCUS       DBBZXW010000062        10351 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.062, whole genome shotgun sequence.
ACCESSION   DBBZXW010000062 DBBZXW010000000
VERSION     DBBZXW010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.062"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(192..614)
                     /locus_tag="ACJJD2_001429"
                     /pseudo
     CDS             complement(192..614)
                     /locus_tag="ACJJD2_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(957..1343)
                     /locus_tag="ACJJD2_001430"
                     /pseudo
     CDS             complement(957..1343)
                     /locus_tag="ACJJD2_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(1410..1715)
                     /locus_tag="ACJJD2_001431"
                     /pseudo
     CDS             complement(1410..1715)
                     /locus_tag="ACJJD2_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(1779..2165)
                     /locus_tag="ACJJD2_001432"
                     /pseudo
     CDS             complement(1779..2165)
                     /locus_tag="ACJJD2_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251873.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(2206..2580)
                     /locus_tag="ACJJD2_001433"
                     /pseudo
     CDS             complement(2206..2580)
                     /locus_tag="ACJJD2_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349130.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(2813..3160)
                     /locus_tag="ACJJD2_001434"
                     /pseudo
     CDS             complement(2813..3160)
                     /locus_tag="ACJJD2_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247143.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(3374..3583)
                     /locus_tag="ACJJD2_001435"
                     /pseudo
     CDS             complement(3374..3583)
                     /locus_tag="ACJJD2_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573675.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(3612..3941)
                     /locus_tag="ACJJD2_001436"
     CDS             complement(3612..3941)
                     /locus_tag="ACJJD2_001436"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7579950.1"
                     /translation="MGGLIIEDLQEGFGKEAVKGKEITVHYTGWLEDGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKESGKRKLTIPSEMAYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            complement(4019..4237)
                     /locus_tag="ACJJD2_001437"
     CDS             complement(4019..4237)
                     /locus_tag="ACJJD2_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HGG7579951.1"
                     /translation="MLKTLTFAALHFSTAFSITYVLTGSIGISGAVALVEPLINTVVF
                     YFHEKAWNLYEKNKTVQQTQPFQLHRCS"
     gene            4359..5312
                     /locus_tag="ACJJD2_001438"
     CDS             4359..5312
                     /locus_tag="ACJJD2_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HGG7579952.1"
                     /translation="MNQKKVVVLDADTLPGRTFHFDFPHELAVYGTTDAAETAGRVRD
                     AHIIITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAEAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIQDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHAPAVREGYVAFENAVRTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTNEPPKNGNPLLKARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(5386..7443)
                     /gene="metG"
                     /locus_tag="ACJJD2_001439"
     CDS             complement(5386..7443)
                     /gene="metG"
                     /locus_tag="ACJJD2_001439"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HGG7579953.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGKLKDVSDSALLAKLTAQSEAIAECYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTATN
                     AARFLNLDAITWTNTRVTLGKHAINKYKHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EESKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATAEGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(7559..9397)
                     /gene="glmS"
                     /locus_tag="ACJJD2_001440"
     CDS             complement(7559..9397)
                     /gene="glmS"
                     /locus_tag="ACJJD2_001440"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HGG7579954.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGIAGSIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKSGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATKGVHVI
                     RAPRHVGKLSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            9503..9628
                     /locus_tag="ACJJD2_001441"
     CDS             9503..9628
                     /locus_tag="ACJJD2_001441"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579955.1"
                     /translation="MPSEGLGLLKKGRDFPVYPRWAFRRHCLPPVYSFYKSILTS"
     gene            9679..10200
                     /locus_tag="ACJJD2_001442"
     CDS             9679..10200
                     /locus_tag="ACJJD2_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579956.1"
                     /translation="MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVVTGKEESMLLSEKDGELSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYRDARNALPSNQTYQQHLAAIEQLKRRFEAEFDELEK
                     EIKCNGRSPALLL"
BASE COUNT         2094 a         2397 c         3081 g         2779 t
ORIGIN      
        1 atggattcgt cattcccgcg caggcgggaa tccagcctcg tcggtacgga aacttatcgg
       61 gaaaacggtt tctttagatt ttacgttctg gattcccact ttcgtgggaa tgacgggatt
      121 taagtttcaa aatttattct aaataactga aactcaacga actagattcc cgcttttgcg
      181 ggaatgacgg tttaggtatt tttatagaaa gccgtaggtg gtgtttctat gcaaacggca
      241 gatgctgcgt cgcggcaggt tgacggcagg tgcttggtgt cgatcttctt ggtggtggcg
      301 gtgtcggctt tgacggcgtc ggcgctggcg gtggcgtcgc gcgtaaccgg ctgtccgcag
      361 aaccatttta ccgaaccggc ttgacgcttg gcccacaggg agagtttttt gcctttgatt
      421 tcgttgttta cgttgcttga agccatttgg gcggtaacga cgccgttttt gacttcaacg
      481 cttttaacat atttgccttt gatgtcggcg gaggttgcca cgccggcaga actgttgttg
      541 gcgggccatt cgccgtgatt caggtaatac tcggtaacgg ctgatttttg accttcagcc
      601 aaaaggatcg cttcgtcatt cccgcgcagg cgggaatcca ggtctgtcgg tacggaaact
      661 tatcgggaaa gcggtttctt gagattttac gttctggatt cccactttcg tgggaatgac
      721 gggattaaag tttcaaaatt tattctaaat aactgaaact caacgaacta gattcccgct
      781 tttgcgggaa tgacgaattt taggtttctg tttttggttt tctgtctttg tgggaatgat
      841 gaaattttaa gttttaggaa tttatcggaa aaaacagaaa ccgctccgcc gtcattcccg
      901 cgcaggcggg aatccagccc cgtcggtgca gaaacttatc gggtaaaaag gtttctctag
      961 tttggtgtcg attttcttgt cggtgctgtt gacggcaggt gcttggtgtc gatttcgttg
     1021 ttgccggtgg ctttgttgac gtcgtcgttg gtggtggtgg tgtcgttgcg ctgaaccggc
     1081 tgtccgcaga accattttac cgaaccgttt tgacgcttgg cccacaggga gagttttttg
     1141 cctttgattt cgttgtttac gccgcttgaa agcattgtgg cggtaacgac gccgtttttg
     1201 acttcaacct ccttaacata tttgccttta atgtcggtgg aggttgccac gccggcagaa
     1261 ttgttgtcgc cgggccatat gccgtgattc aggtaatact cggtgacggc tgatttttga
     1321 ccttcgacca aaaggatagc ttcgtcattc ccgcgcaggc gggaatccag ccttgtcggt
     1381 gcggaaactt atcgggtaaa aaggtttctc tagtttggtg tcgattttct tgtcggtgct
     1441 gttgacggca ggtgcttggt gtcgattttt tcgttgccgc tgtcggcggt gacgtcggcg
     1501 tcggcgtcgg tggctttgtc ggcgcgcgta accggctgtc cgcagaacca ttttaccgaa
     1561 ccggcttgac gcttggccca cagggagagt tttctgcctt ggatttcttt gtttacgttg
     1621 cttgaagcca tttcggcggt aacgacgccg tttttgactt caactttctc aacatatttg
     1681 cctttgatgt cggaggcgga tgccacgccg gcggcatcat taaatcccgt cattcccacg
     1741 aaagtgggaa tctaggactc aggaccggag aaaccttttt acccgataag tttctgcgcc
     1801 gacagaccta gattcccgct ttcgcgggaa tgacgggatg taggttcgtg ggaatgattg
     1861 gtgtcgatct tcttgttggc ggcggcggta acggcgtcgg cgtcggcttt ggcgcgctga
     1921 accggctgtc cgcagaacca ttttaccgaa ccggcttgac gcttggccca cagggagagt
     1981 tttttgcctt ggatttcttt gtttacgccg gttgaaagca ttgtggcggt aatgacgcct
     2041 tttgcgactt caactttctc aacatatttg cctttgattt cagaggaggt tgccacgccg
     2101 gcagaactgt tgtcgccggg ccatatgccg tgattcaggt aatactctgt gacggctgat
     2161 tttttggaag tgtttgaagt cggcgcgtgg tgtttctatg caaacggcag atgaagcgtc
     2221 gcagcaggtt gacggcaggt gcttggtgtt gatgttgtcg gcggtcttgc cgttggcggc
     2281 ggcgacgtcg tcgctgtcgg cggcggtgcg cgtaaccggc tgtccgcaga accattttac
     2341 cgaaccgtct tgacgcttgg cccacaggga gagttttttg ccttggattt ctttgtttac
     2401 gccgcttgat ttcatttcgg cggtaacgac gccgtttttg acttcaacgc ttttaacata
     2461 tttgcctttg atgtcggtgg cggaggatgc cacgccggca gaagtattgt tttttggcca
     2521 tatgccgtga ttcaggtaat actcggtgac ggctgatttt tgaccttcag ccaaaagaat
     2581 gacgaatttt aggtttctta ttttggtttt ctgtctttga gggaatgatg aaattttgag
     2641 ttttaggaat ttatcgggag caacagaaac cgctccgccg tcattcccgc gcaggcggga
     2701 atctaggtct gtcggtacgg aaacttatcg ggaaagcggt ttctttagat tttgcgttct
     2761 ggattcccac tttcgtggga atgacgggat gtaggttcgt gggaatgacg gtttaggtat
     2821 ttttatagaa agccgtaggt ggtgtttcta tgcaaacggc agatgctgcg tcgcggcagg
     2881 ttgacggcag gtgcttggtg ttgattttgt cggtgtcggg tgtggcggcg gtgacggcgt
     2941 cggcggtggc tttggcgttg cgctcaaccg gctgtccgca gaaccatttt accgaaccgt
     3001 tttgacgctt ggcccacagg gagagttttc tgccttggat ttctttgttt acgccgcttg
     3061 aagccatttg ggcggtaacg acgccgtttg cgactgtaac gctttgaaca tatttgcctt
     3121 tgatgtcgga ggcggtggat gccacgccgg cggcatcatt aaatcccgtc attcccacga
     3181 aagtgggaat ctaggactca ggactggaga aaccgtttta cccgataagt ttctgcgccg
     3241 acaaacctag attcccgctt ttgcgggaat gacgaagttt ttctgccatt tgccgtgatt
     3301 cgggcaatac tcggtaacgg ctgatttttt ggaagtgttt gaagtcggcg cgtggtgttt
     3361 ctatgcaacc ggtagatgaa tcatcgcggc aggttgacgg caggtgcttg gtgttgattt
     3421 tgtcgtcggt gccgttggcg gtggcggctt tgacgtcgtc ggtggctttg tcggtgcgcg
     3481 caaccggcag tccgcagaac cattttaccg aaccgtcttg acgcttggcc cacagggaga
     3541 gttttttgtc tttgatttcg ttgtttacgc cgcttgaagc cattatgtca gacggtattg
     3601 cccgggcagc tttattcgta cactttcagc agctcgactt caaatatcaa agtggcgtgc
     3661 gggggaatca cgccgccggc accgtgtgcg ccgtaagcca tttcagaagg gatggtcagc
     3721 ttgcgtttgc cgctttcctt cattccgccg aagccttcgt cccagccttt gatgacttgt
     3781 ccgacgccga gcgtgatggt cagcggctgg cggcggtcga ggctggagtc gaatttggta
     3841 ccgtcttcca gccaacctgt gtaatgcacg gtaatctctt tgcctttaac tgcttctttt
     3901 ccgaagcctt cttgcaagtc ttcaataatc aggccgccca tatttgtcct ttcattgctt
     3961 gttggtcaaa acggcaaggg taacataccg tccgtcgaag tcaaatgccg ctcaaacgtc
     4021 agctgcatcg gtgcagctga aacggctgtg tttgttggac tgttttattt ttttcgtaaa
     4081 ggttccatgc tttttcatgg aaatagaaaa cgacggtgtt gattaggggc tcgaccagcg
     4141 cgaccgcccc ggatatgcct atactgcccg tcagtacata ggttatactg aaggcggtgc
     4201 tgaaatgcag tgcggcaaaa gtcagggttt taagcatcat cctctcccga attggacatt
     4261 gacggaggga tgataaagat tatcataagg ctgtgcggtt taaatttgct atttgctgtt
     4321 agtgtaaata aatcattttc taaataggga taaaaattat gaatcagaag aaagtagtcg
     4381 tattggatgc ggatacttta cccggtcgga cttttcactt cgatttccca cacgagcttg
     4441 cggtttacgg tacgacagat gctgcggaaa cggcagggcg ggtgcgcgac gcgcatatta
     4501 tcatcaccaa taaggtgatg atttccgccg acattattgc ggctaatcct cagcttgagc
     4561 tgattgccgt cagtgcgacc ggtgtgaaca atgtcgatat tggggcggcg gaggcggcgg
     4621 gcgttgcggt atgcaatgtc cgcgcctacg gaaacgaatc ggttgcggaa catgccttta
     4681 tgctgatgat tgccctgatg cggaatttgc ctgcctatca gcgtgatgtt gcggcaggat
     4741 tatgggaaaa atcgccgttt ttctgccatt acggcgcgcc gattcaggat ttgaacggca
     4801 aaacgctggc ggttttcgga cgcggcaata tcggacggac gctggcagga tacgcgcagg
     4861 cgttcgggat gggggtggtg tttgccgaac acaaacacgc gcccgctgtg cgcgaaggct
     4921 atgttgcctt tgaaaatgcg gtacggactg ccgatgtgtt gtcgctgcac tgtccgctga
     4981 acgcacaaac tgaaaatatg ataggcgaaa atgagttgcg gcagatgaag cccggtgcgg
     5041 ttttgattaa ttgcgggcgc ggcgggctgg tggatgaaaa cgcgctgctt gccgcactca
     5101 aatacgggca gatcggcggg gcgggcgtgg atgttttgac gaatgagccg cctaaaaacg
     5161 gcaatcctct gttgaaggca cgacttccca atctgattgt tacgccgcat accgcgtggg
     5221 caagccgcga ggctttggac aggctgtttg atatattgtt ggcgaacatt cacgcctttg
     5281 tgaaaggcga ggcgcaaaac cgggtggttt gagcttgtcg ggatgacgaa aaaatgccgt
     5341 ctgaacgcct caagggttca gacggcattg ttttgacatt tctgcttaac cgactttgtc
     5401 gcccggttgt gcgcctgcat ccacatccaa gagcttcagt ttgccctctg ccgtggcggc
     5461 actcaaaatc ataccttcgg atacgccgaa ttttgccatt ttgcgcgggg cgaagttggc
     5521 gacggcgatg accattcttc cgtttaactc ggcagggttg ggataagacg cggcgatacc
     5581 ggagaagatg atgcgttttt caaaaccgaa atcgaggtcg aatttcaaaa gtttggtgct
     5641 gccctcgacg gcttcgcagt tcaagacttt ggcgacgcgc atatcaattt tcataaagtc
     5701 gtcgaagctg gcctgttcgg cgactttttc gtatttgctc tcttcggcgg caggtgcggc
     5761 tgcggcggcg atgctttgtt tgttggcttc gattaaatcg tccacttgtt tttgctccac
     5821 tcgttgcatt aaatgtttgt atttgttgat ggcgtgtttg cccaaggtta cccttgtgtt
     5881 cgtccaagta atcgcgtcca gattgaggaa acgcgcggca ttggtggcgg tttgcggcaa
     5941 tacgggggcg aggtaggcgg tcagcatcgt aaaggcgttg atgagttcgc tgcatacttc
     6001 gtgcaggcgt tcgtcttggc cttcttgttt ggcgagttcc caaggtttgt tggcatcaac
     6061 gtattcatta acaatgtctg ccaatgccat gatgtcgcgc agggcgcggg cgtattcgcg
     6121 gttttcgtag cattcggcaa tggcttcgct ttgcgcagtc agttttgcca gcaatgcgct
     6181 gtcggaaacg tctttgagtt ttccttcaaa gcgtttggcg atgaaacctg acgcgcgggc
     6241 ggcgatgttg acgtatttgc cgacgaggtc gctgttgacg cgcgagataa agtcttgcag
     6301 gttcaaatcg atgtcttcga ttttgctgtt gagtttggcg gcgatgtagt agcgcatcca
     6361 ctcggggttt aggccttgtt ccagatagga tttggcggta ataaacgtgc cgcgcgattt
     6421 ggacattttt tgtccgtcca cggtcaaaaa gccgtgtgcg tacacgccgg tcggggcgcg
     6481 gtggccggag aaatgcagca tggcgggcca gaacagggcg tggaaataga ggatgtcttt
     6541 gccgatgaag tggtacatct cggtttggct gccggctttg aagtattcgt cgaaatcgat
     6601 gccgatgcgg tcgcacaggt ttttaaacga tgccatgtag ccgacgggcg cgtccagcca
     6661 gacgtagaag tatttgcccg gcgcgtcggg gatttcaaaa ccgaaatacg gcgcgtcgcg
     6721 ggaaatgtcc cagtcggaca gggtggtttc ttcgccttcg cccagccatt ctttcatttt
     6781 gttgagggct tctggttgca gatggggttt gccgtcgtgc gggttgttgc cggaagtcca
     6841 tgctttgagg aagtcggcgc attcgcccag tttgaagaag aagtgttcgg attcgcgcaa
     6901 ttcgggtttc gcgccggaaa cggcggaata cgggttaatc agttcggtcg gggaataggt
     6961 cgtgccgcag acttcgcagt tgtcgccgta ttggtcttgg gcgtggcatt tcgggcattc
     7021 gcctttaacg aagcggtcgg gcaggaacat ttgtttttcg gggtcgaaaa gctgctcgat
     7081 gacgcggctc tcaatcttgc cgttggcttt cagcgcgcgg taaatatctt gggaaaactg
     7141 tttgttttca ggggaatggg tgctgtaata attgtcgtag ccgatgttga aaccggtaaa
     7201 gtcggcgagg tgttcttcgc gcactttggc aatcatgtct tcgggcgcga tgccttgttt
     7261 ttgcgcggca agcatcacgg gcgtgccgtg ggtgtcgtcg gcgcagcagt agtagcattc
     7321 gttgccgcgc agtttttgga agcgcaccca aacgtcggtt tggatgtgtt cgaccatgtg
     7381 gccgaggtgg atgctgccgt tggcataggg cagggcggag gtaactaaga ttttgcgtgt
     7441 catattgtgc tttgcaaaca atgggtaaag gcggattata ccgcaaatca aacggggaaa
     7501 tgccgtctga agcctgaaaa atcgggcttc agacggcatt tttgcaaaac ggcgggagtt
     7561 attcgacggt tacggatttc gccaggttgc gcggcttgtc cacatcggta ccgcgtgcga
     7621 gggcggtgtg gtaggcgagg agctgcacgg ggatagtatg cacgacgggg gacagtttgc
     7681 cgacgtggcg cggtgcgcgg ataacgtgca cacctttggt ggcattaaaa ttactgtcga
     7741 ggtcggcaaa gacgaaaagt tcgccgccgc gcgcgccgac ttcctgcata ttggctttga
     7801 ctttgtccaa caggctgtcg ttgggtgcga tgacgacgac gggcatgttt tcgtccacca
     7861 aggcaagcgg cccgtgcttc agttcgccgg caggataggc ttcggcgtgg atgtaggtga
     7921 tttccttcag ttttaacgcg ccttcgaggg caatcgggta atggatgccg cgccccaaaa
     7981 acagcgcgct ggttttcttg gcaaactgtt gcgcccaggc ggcaatttgc ggttcgaggt
     8041 ttaaagcgtg ctgcacgctg ccgggaagct ggcggagttc ttcggtgtaa cgtgcttcgt
     8101 cttcttcgga aaccaaaccg cgcactttcg ccagcgttac cgccaaaccg aacagcgcaa
     8161 ccagctgcgt ggtaaatgct ttggttgagg cgacgccgat ttccgcaccg gcacgggtat
     8221 aaagcacgag gctgctttcg cgcggcaggg cggattccat cacgttgcag atggagaggc
     8281 tgtggcggtg tcccaaggat tttgcgtatt tcaacgcctc catcgtgtcc agcgtttcgc
     8341 cggattggga aatggtaatg accagttggt ccggatcggc aatcacgctg cggtatcggt
     8401 attcgctggc gatttcgaca tcggccggga ttttggcgat ggattccaac caatatttgg
     8461 cggtcagcgc ggcgtaatag gacgtgccgc aggcaaggat tttgacgctg cggatgcttt
     8521 caaacacgct tttggcgttt ttgccgaagt tttcggggat gaagccgccg tcgaggaaaa
     8581 cctccgccgt gtctgcaatc gcgcgcggct gctcatggat ttccttttgc ataaagtggc
     8641 tgtacggtcc cagttccaaa gaggcgagcg agagttcgga taccttgact ttgcgttcgg
     8701 caggcaggcc gcttttatcg gtcagccgtt tgatgccgtc tgaagccagc agcgcgatgt
     8761 cgccgtcttc gaggtacgcc acgcggcgcg taaaggcgat gacggcggat acgtccgaag
     8821 cgataaaggt ttcatcgtcg cccaaagcga ccaaaagcgg gcagcccata cgcgccacaa
     8881 ctaattcatc aggcttgtct tgggcaataa ccgcgatggc gtatgcgccg tggaaacgtt
     8941 tgaccgcttc ctgtaccgct tcaaacagcc tgccgccgtt ttgcgcgtat tcgtgattga
     9001 tgctgtgtgc gatgacttcg gtatccgttt gcgattcaaa ccggtatccc aaaccttcca
     9061 agcgtttgcg ttcgctttca aagttttcga tgatgccgtt gtggacgacg gctatcatcc
     9121 caccggaaat atgcggatgg gcattcggct cggtaacgcc gccgtgtgtc gcccaacgcg
     9181 tatgtccgat gccgatgctg cccgctattc ctttttcacg ggcagcgtcc tccataagct
     9241 gcacgcgtcc gacgcggcgc acgcgtttga ttttgccgtc ggtgttgacg gcaatacctg
     9301 atgagtcata accccggtat tcgaggcgtt tgaggccgtc ggtcagaaaa tcgacgacgt
     9361 tgtgatgggc gcggatggcg ccgacgatac cgcacataac tgttccttag tatcaggttg
     9421 aaaaaaaaca ggtgcggacg gctcccgtgc cgcaccttcc gcttcggatt ataaaccgcc
     9481 tcccgcgccg aaaaacagca aaatgccgtc tgaaggcttg ggcttgctca aaaaagggag
     9541 ggatttccct gtttatccga gatgggcgtt cagacggcat tgcctgccgc cggtttatag
     9601 tttttacaaa tcaatattga caagctgaaa aaaaaaaaca atatactcgc tcggtcttaa
     9661 tgttaaagga gtatggaaat gaaacaaatg cttttagccg tcggcgtggc ggcggtgttg
     9721 gcgggctgcg gcaaggatgc cggcggttac gagggttatt ggcgcgaaaa atcggacaaa
     9781 aaagagggta tgattgccgt caaaaaagaa aaaggcaatt acttccttaa taaaatcaac
     9841 gtggttacag gtaaggaaga atctatgctt ttgtctgaaa aagacggcga gctttcgata
     9901 aacacgggga taggggaaat cccgatcaaa ctttccgacg acgggaaaga gctgtatgtc
     9961 gaacgcaggc agtatgtcaa aaccgatgcg gcgatgaagg acaaaatcat cgcccatcag
    10021 aaaaagtgcg gacaaacagc acaggcatac cgcgacgcgc gaaatgcgtt gccgtcaaac
    10081 cagacgtatc agcagcatct ggcggcgatc gagcaattga aacggcggtt tgaagccgag
    10141 tttgacgaat tggaaaaaga aatcaaatgc aacggcagaa gcccggcatt gttgctttag
    10201 taggggacaa ccgggaggat gccgccgtcc gaatcggatg tgcggtttct gtaccggtac
    10261 gggcgggcag gaatgtccgc cttttttgtt cggatgcgtt tgaatacccg tttgattccg
    10321 accgtttgca aggggtattt ccgttcgggc g
//
LOCUS       DBBZXW010000063        10327 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.063, whole genome shotgun sequence.
ACCESSION   DBBZXW010000063 DBBZXW010000000
VERSION     DBBZXW010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10327
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.063"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(99..1190)
                     /locus_tag="ACJJD2_001443"
                     /pseudo
     CDS             complement(99..1190)
                     /locus_tag="ACJJD2_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
     gene            complement(1320..1868)
                     /locus_tag="ACJJD2_001444"
     CDS             complement(1320..1868)
                     /locus_tag="ACJJD2_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HGG7579957.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            complement(2023..2394)
                     /locus_tag="ACJJD2_001445"
     CDS             complement(2023..2394)
                     /locus_tag="ACJJD2_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HGG7579958.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVQAANPQAALAQYFGRGGR"
     gene            complement(2450..2557)
                     /locus_tag="ACJJD2_001446"
                     /pseudo
     CDS             complement(2450..2557)
                     /locus_tag="ACJJD2_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(2689..4380)
                     /gene="dld"
                     /locus_tag="ACJJD2_001447"
     CDS             complement(2689..4380)
                     /gene="dld"
                     /locus_tag="ACJJD2_001447"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HGG7579959.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            complement(4547..4643)
                     /gene="ffs"
                     /locus_tag="ACJJD2_001448"
     ncRNA           complement(4547..4643)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACJJD2_001448"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            4904..8737
                     /locus_tag="ACJJD2_001449"
     CDS             4904..8737
                     /locus_tag="ACJJD2_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HGG7579960.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRHQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEFVELAGLDGRHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAIFD
                     VHTLDSDGLNVVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITSVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHESVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAISPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWDWLLANLDTPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIEGLGKIHAKTV
                     RGRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLNGVISGEHGI
                     GITKLEFLSDEEMQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVQGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            8813..9814
                     /locus_tag="ACJJD2_001450"
     CDS             8813..9814
                     /locus_tag="ACJJD2_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HGG7579961.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(9876..10058)
                     /locus_tag="ACJJD2_001451"
     CDS             complement(9876..10058)
                     /locus_tag="ACJJD2_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579962.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
BASE COUNT         2345 a         2808 c         2810 g         2364 t
ORIGIN      
        1 gggtttctgt tttttccgat ggattcctgt tgcgttgggg gctggattcc cgctttcgcg
       61 ggaatgacgc ggtgggggtt tcggtttttt ccgcctgttt attttgcggc ttcgattgcc
      121 gctatttctt tgcgtaggtg tttgattgcg ggggttacga tggcgacaaa catcgcttcg
      181 cggacgcgcc tttgggcggg actgcgcatc aggtagcctt ttgcgccgga atgcagtgcg
      241 gcggattggg cggcggcaag tgccagtacg gcggcggctt cgcgcagctt gagggtagca
      301 aggttgtcgg gcgtgccgct ccaagccaag ccggcgagcc gttcggtttc tgcccacgcg
      361 ccgtccaacc ttgctttgag gctgtcgtag ccgtcgtcga gatagctgtt gacttctgca
      421 ttgacgatgt tggcgaggcg gatgatgccg aggctgccgt ctatcacgcc cgcgccgatg
      481 ccgatttgca ggaggataaa gcctgctttg atgctttgga tgtagtcggc aaactgttcg
      541 ggcgcggcga tgatgtcttc gtcggggata aatacgtctt tgaagttcag gctgaaggtg
      601 cgcgtgcctt cgagggcgca aaattcgggg cagttttgca ggcttacgcc ttcccattgt
      661 ccgccggtga taaacataac gtaaccgtcg ccgatttggg cggtattcgc ctagatgtgg
      721 tcttcgccga tgttggacac ccacggcagc gcgccgttga ctgtgtagcc gccctccact
      781 cgctcagctt ggaggttgtg tttttcgatg ccggcaaggt gtttgacggt attggacatg
      841 cccgtacccg ccaatacttt gccttgcagg atgtcggcga ggtatttgtc tttgacggct
      901 tggttgggcg tttggtgcag ataccacgcg caagccgcct gacaccacgc gctgaaggag
      961 gttgcgccgc attctttgcc gatttcgcgc aagacggcga tttgcgttgc caaacccaag
     1021 ccgttgccgc cttcggcttc tgtaccgact gcgccgaatc cgccgattgc gccgagttcg
     1081 cgcataaatg cttcggggta gtatcctttg cggtcgatgt cgtccactat gggtttgagc
     1141 ttggttttga cgagttcggc aacgttggca atcagggttt gggcgttcat ctttgttcct
     1201 taaggtttgc gggggaatcg ggcgcacgcc tgatgcgcgg ctgcttccct gccgtttggc
     1261 ggcttgtttt tgtttgaggg gggttgaaaa accgcccgat attcgggcgg tttgccgtat
     1321 caggcgtaag cctgcaattc ggggttgatt tcggtttgtc cgaggttgtt gacgtagttg
     1381 cacaaagttg ccaaggctac gcccatcacg acttcgactg cctgctgctg gttgtagccc
     1441 gcatcaaaaa atgctttgag ttcctcgtcg gataccgcgc ctttttttgc cattacggct
     1501 tgggtaaagg cggcgagcgc gccgagttta gcatcgtcaa attcgcctgc cgccaaagcg
     1561 cgcgcggctt tgacggattg ttcggaaagg agttttttca gggttgcgag tttggtgtgc
     1621 cctgccacgc agaagccgca ttggttggtg cgggcggcaa taatctggat tacttcgact
     1681 tcgccggcgg tcaggctgtt ggcggcgttg agcttgccga cttcttggta aaacgccaag
     1741 gcttcggggg cgtttgataa tacgccgata aggttgggga taaagccgtt gttttgaagt
     1801 accgcctcga cgcgcgcttt ggcggcttcg ggggcggttt cgagggtgtg tacggttaaa
     1861 cgtgccattt tctttccttg ttcgcaaata ttgggtacgg gcgcatggta tgcatttcgg
     1921 aacggaatag gaaagactga ttggttatgt gctgcaaacg aaaggttata agaaatgccg
     1981 tctgaacatt tttcagacgg catgatggaa aagaaaacgc gcttatcggc ccccgcgccc
     2041 gaaatattgc gccaatgcgg cttgggggtt ggcagcttgg actgtttcgg gcaattcggt
     2101 atagccgcgc gataaaaggt ggcgtgcata aaggctgttg ccctttgcgc cgaaccagac
     2161 ggaaaccgcc aagcccaata cgttaaacgc cgagtctgtg gcgggcgtgt cgccgtaaac
     2221 cagttgggca aacacagcca gcacgaatat cgcgcccgtc agccccagcc ccaaacccca
     2281 cattcttttg aaacacgccc acagcgtgcc gaacaagagc cccggccatg accagccttg
     2341 tttgacggct tggggcggca gggcgggatg ggtgtagatt ttgtatggtt tcatcgtgtt
     2401 tccttttcgg ttgaaaccct gccctttggg aaggtaggat cagactttat agtggattaa
     2461 atttaaacca gtacggcgtt acctcgcctt gccgtactat ctgtactgtc tgcggcttcg
     2521 ttgccttgtc ctgatttaaa tttaatccac tatatttggg aggggcgcgc ccgtgtgtcg
     2581 gcatacggtt tgaaagcgat tacccgacgg ggaacttcaa acccgacaat gccgtctgaa
     2641 cggcgttttg ccttcagacg gcattgcctg ccttcaaagc ggacacgctt attccgccca
     2701 gtttttcttt ttgctggttt tgcctacgcc cgggttgaag ctgttggtcg ggtcaagttt
     2761 gcggtaaaac tgtttgagcg cgggtttggc ttcatacaaa tgaccgacgt tgtgttcggc
     2821 gggatattgc gcgccgcgtt ggtctaaaag atgcagcatt tcgtgttcca acgccatgca
     2881 gtcgttgcct tttttgatga tgtaatcctg atggaaaacg tggcacatga aatgtccgta
     2941 gtagagtttg tggatgattt tattgtcgat ttcgggcggc agtttttcaa accagtcgcg
     3001 gtcgtcgcgg cgcagggcga tgtcaagcgc gaccaagtct tccacttcgt catcatgcac
     3061 ggcgcggtag cggatggcgg cggaggcgac ggcgaaacgg tgcagcatcg cggcttgggt
     3121 ttcttcggcg ttgcactcga aaaacgcgcc gctgtggtgt gcaaaatatt cttttaagaa
     3181 cgcgcgcgcc tcatccacgc ctttcccgcc cattttcaga atcaaatggt gttcgtattt
     3241 gtcgcggtaa tcgcgcatgg atttgggcag gtggtcgggc aggtatttgc tgacgaactg
     3301 catggccttg tcggaaaaat gtttgggcag gaagctggct tttttgccga acctgtccac
     3361 gcgcgccttc aagtcaaata atttcggcag ttggtgcgta ccgaattttt tgatgacgta
     3421 aaacgtgtct ttgccgtaca cgtcggcaat atcgaaagcg tggcggtgga tgtattcgcc
     3481 ggaaacaggc aggctttcaa attcgcccaa ggcggcgcgg cggatgtcgg tcagctcgtt
     3541 gatgtcgttc gtgccgatgt agaacacggc ggtttgtttt tcttgcggga aggtgtccaa
     3601 acggacggca aaaaccatca gtttgcccgc gcagcccgag gcttcgtaat ggcgggcggg
     3661 gtcggcattg aaacgcgcgg cggtcggttc gtccacttgg cggacgtgtt cgcaataggc
     3721 gtggtcgtgt cctttgcccg cgtcttgttt gatgtctttg ttttgataat gatgaccttg
     3781 caggttggtc aggatttctt cgggcgtgtc gcccaagtct atgcccaagt ggttgaccag
     3841 ttccaacctg ccttcttcgt tgatttgggc gaacagtgcc atttcggtgt aggccgggcc
     3901 gcgctgtacc aatgcgccgc cggagttgtt gcacacgccg cccaagacgg acgcaccgat
     3961 gcaggaagag ccgataaccg aatgcggttc gcgtcccaag ggtttcagca gcaattcaag
     4021 ctggttcagg gtcgagccgg gcaggcagac gacttgttcg ttgttgttga tggtttggat
     4081 gatgttcatc cgcatggtgt tcacaatcac gatgtcgcgg tcgtaatcgt tgccgtcggg
     4141 ggtcgaaccg ccggtcagtc cggtattcgc cgcctgcgta atcacaatca cgtctgcttc
     4201 gacgcacgcc tgcagaattt tccacatttc cagaatgctt ccggggcgaa ccaccgccaa
     4261 cgccttaccc tcgccgaagc ggtaaccttg gcggtattgt tcggttttcg cggggtcggt
     4321 aatgatgtat ttttcgccta cggtttgggt cagtcttgac agtaattgtg atgcgctcat
     4381 ggcagtttcc ttaaaattgt cggcaggtgc attgcacatt ggaattgttt tcacattgta
     4441 gttatacgtt atggcaaagt aaagaaaatg ccgtctgaac ggctttcaga cggcaacggt
     4501 gcgatacggg aacgccggaa catcaaagct ccggcgtttc aaatagggcg gcgggccaaa
     4561 cccccggcac tggcgcaccg gagtgggctg ctggcttccg cccctgaccc ggtgttccga
     4621 tttgccatgc ggggagaccc gcctcagaga aacggcatta taacgggttt tctgaaaaac
     4681 tcaaccgttt tgatacggtc atacgccgga aacaccacct aaaatttata tttgataata
     4741 ttgtcaacaa tttctcaaag cgttattttg tttctataag ggtatttcct gtttcggcat
     4801 tgaaaaatat caaaaattga actacattat cgccttttca aactcgcctg aaaccgaatt
     4861 ttcagacggc attcaaataa aaactgccaa gcacggacac accatgacca cgactactgc
     4921 ccctcagcgt attcgagaaa ttccctataa ctatacttct tataccgacc gcgaaatcgt
     4981 catccgcctg ctgggcgacg aagcgtggca gattctgcaa gacttgcgcg gacagcgtaa
     5041 aaccggacgt tcggcacgga tgctgtttga agtgttgggc gatatttggg tagttgtgcg
     5101 caatccatat ctggtcgatg acttgttgga gcacccgaaa cgccgcgccg cgctggtgcg
     5161 ggaaatgcgc caccgtttga acgaaatccg caaacgccgc gacgataatc ggcaagtgga
     5221 tgtattggtt gcggcagcgg aaaaggcagt cgagcgtttt gatagcagtt ttgatgaaac
     5281 cagccaaaaa cgccatcaaa ttttggaacg cttaagcaaa attaccaagc cgcacaatat
     5341 tatgttcgac gggctggcgc gggtaacgca tgttaccgat gcaaccgact ggcgcgtcga
     5401 atatccgttt gtcgtcgtca atcccgacac ggaggcggaa gtcgcgcctt tggtgcgcgc
     5461 cttaattgag ttggacttgg ttattatccc gcgcggcggc ggtacgggtt ataccggcgg
     5521 cgcgattcct ttggacgcaa tgagcgcggt catcaatacg gaaaagctgg acaaacatcg
     5581 cggcgtggaa tttgtcgaac tggcgggctt ggatggcaga catccgatta tccggtgcgg
     5641 cgcgggcgtg gttacgcggc gagtggaaga aaccgcgcat caggcaggtt tggtgttcgc
     5701 cgtcgatccg acttctgccg acgcgtcctg cgtgggcggt aatgtagcga tgaacgcggg
     5761 cggtaaaaaa gccgtgctgt gggggacggc gttggacaac ctcgcctact ggcaaatggt
     5821 caaccctcaa ggcgaatggc tgcgtatcga acgcgtgcgc cacaatttcg gcaaaatcca
     5881 cgacgaagaa accgcaatat ttgacgttca cacactggat tcagacggcc tcaatgtcgt
     5941 caaaaccgaa cgcttggaaa ttcccggtca caaattccgc aaagtcggtt tgggcaaaga
     6001 cgttaccgac aaattcttga gcggcctgcc cggcgtgcag aaagaaggca cggacggcat
     6061 catcaccagc gttgccttcg tgttgcataa aatgccgaaa tacacgcgca ccgtgtgtat
     6121 ggagtttttc ggcacggttg ccaccgccac gccatctatt gtcgaaatcc gcgacttttt
     6181 gcttgcccat gaaagcgtac ggctggcagg tttggaacat ttggactggc gttatgtccg
     6241 cgccgtcggc tacgccacca aagcggcggg caagggacgg ccgaaaatgg ttttgctggc
     6301 ggacgtggtt tcagacgacg aagccgccgt agaggcagcc gccgaacaca tctgcgaact
     6361 tgcccgcgcc cgcgacggcg aaggctttat cgccatatct cccgaagccc gcaaaacctt
     6421 ctggctcgac cgcagccgca ccgccgccat cgccaaacac accaacgcct ttaaaatcaa
     6481 cgaagacgtg gtcatcccac tcgaaaggct cggcgagtat tcagacggca tcgaacgcat
     6541 caacattgag ctttccattc aaaacaaact caaactctgt gccgccttgg agcaatatct
     6601 gtccggcaaa ctccccatcg acaaaatggg aaccgacctg ccgaccgccg aactgttggg
     6661 cgaacgcggc aaacacgccc tggcccacgt ttccgccgtc aaagcgcgtt gggactggtt
     6721 gctcgccaat ctcgacacgc cgcttgccga ctacaaggcc cgctacggcg cagccgtcca
     6781 cgccgcgccc gaagccaaag acaatgaaag ctgctttacc gcattccgcg atttccgcct
     6841 gcgcgtgtct gtcaaagcag acgtaatgaa gccgctttct gaaatcttca gcggcaaaac
     6901 cgacaccaaa atcatcgaag gcttgggcaa aatccacgcc aaaaccgtgc gcggcagagt
     6961 ctttgtcgcc ctgcatatgc acgccggcga cggcaatgtc cacaccaata tccccgtcaa
     7021 ttcagacgat gccgaaatgc ttcagacggc ataccgttct gtggaacgca ttatgaaaat
     7081 cgcccgttcg cttaacggcg tgatttcggg cgaacacggc atcggcatca ccaagctcga
     7141 atttttaagc gatgaagaaa tgcagccgtt ttggaactac aaaaaccaag tcgatcccaa
     7201 acacaccttc aaccgccaca aactgatgaa aggatcggac ttacgcaacg cctacacgcc
     7261 gtcgttcgag cttttgggtg cggaatcgct gattatggaa aaatcagatc tcggcacgat
     7321 tgccgattcc gtcaaagact gcctgcgctg cggcaaatgc aaacccgtct gctctactca
     7381 cgttccgcgt gccaacctgc tgtacagtcc gcgcaacaaa atcctcggcg tgggcttgct
     7441 gaccgaagcc ttcttatacg aagaacaaac ccgccgcggc gtttccgtca aacactttga
     7501 agaactcatg gacatcggcg accactgcac cgtgtgccac cgctgcgtca aaccctgccc
     7561 cgtcaacatc gacttcggcg acgtaaccgt agccgtccgc aactaccttg ccgattccgg
     7621 ccacaaacga tttgcgcctg ccgcagctat gggtatggcg tttttgaacg ccaccggccc
     7681 gaaaaccatc aaagcccttc gcgccgccat gatacagacc ggcttcccag cgcaaaactt
     7741 tgcctacaaa atcggcaagc ttcttccgat cggcacgaaa aagcaaaaag ccgaacccaa
     7801 ggcaaccgtc ggcaaagccc caattaaaga acaggttatc catttcatca accgtccttt
     7861 gccgaaaagc gtacccgcca aaacaccgcg ctccttattg ggcatcgaag acggcaaaag
     7921 catccccatc atccgcaacc ccgccgcgcc cgaagatgcc gaagccgtgt tctacttccc
     7981 gggttgcggt tcggaacgcc tgttcagcca aatcggactt gccgttcaag ccatgctctg
     8041 gcacgtcggc gtacaaaccg tcctgccgcc cggctatatg tgttgcggct atccgcaaga
     8101 cgcgggcggc aacaaggcta aagccgaaga aatgagcacc aacaaccgcg tggctttcca
     8161 ccgtatggca aacaccctca actacctcga cattaagacc gtcgttgtca gttgcggcac
     8221 ttgttacgac cagctcgaaa aataccgctt tgaagaaatc ttccccggct gccgcatcat
     8281 cgacatccac gaatacctgc tcgaaaaagg cgtgaaactc gacggcgtgc aaggtcagca
     8341 atacctctac cacgacccct gccacacccc catcaaaacc atgaacgcca cccaaatggc
     8401 cagcagcctg atggggcaga aagtcgtctt aagcgaccgc tgctgcggcg agtccggtat
     8461 gttcgccgtc aaacgacccg atatcgccac ccaagtcaaa ttccgcaaac aagaggaaat
     8521 cgagaaaaac ctcaaagagc tgccgcaggg tgaacccgtc aaaatgctta cttcctgccc
     8581 agcctgcctg caaggcttga gccgctacac cgacgacaac aatatgcctg ccgactacat
     8641 cgtcatcgaa atggcgaaac acatcctcgg cgaaaactgg ctagacgagt ttgtgaaaaa
     8701 agccaacaac ggcggcgtgg aaaaagtatt gctgtaacaa cggacacgga aatgccgtct
     8761 gaacgccgaa gtcttcagac ggcattgttt aaacccaata cctacccaaa tcatgattga
     8821 cggacaaaca accgaaccca aacaaaaaac ccgaatcatc cttgccccta tgcagggtct
     8881 ggtcgatgac gtgatgcgcg acctgctgac gcgtattggc ggctacgacg aatgcgtcag
     8941 cgaatttgta cgcattaccc ataccgtgca ttcccgatcc atatggttaa aatatgtccc
     9001 cgaaatcgcc aacggaaaca aaacgttttc cggcacgccc tgcaccgtcc aacttttggg
     9061 cagcgatgcg gacaatatgg cggcgaatgc gctggaagcc gtccgcttcg gtgcgaacaa
     9121 aatcgatttg aacttcggct gccccgcgcc caccgtcaac aaacacaaag gcggcgcaat
     9181 ccttttaaaa gagccggaac tgatattcca catcgtcaaa acgctgcgcg gacgtttgcc
     9241 cgcacatatt ccgctcaccg caaaaatgcg gctcggttac gaagacaaaa gccgggcttt
     9301 ggaatgcgcc tgtgcgattg ccgaaggggg cgcatgcgga ctgaccgtac acgcgcgtac
     9361 caaagccgag ggttacgaac cgccggcgca ttgggaatgg ataaggaaaa tccgagacag
     9421 cgtcaatatt cccgttaccg ccaacggcga cgttttcagc ctgcaagact atatcggcat
     9481 caaaacaatc agcggctgca acagcgtgat gctcggtcgc ggcgcggtca tccgccccga
     9541 tttggcgcgg caaatcaagc aatacgagaa cggcgggccg gtcaaagaca cggattttgc
     9601 cgaagtttcc aaatggatac ggcagttttt cgagctgtgc ctgacaaaag aggcaaacaa
     9661 taaatacccg atcgcccgtc ttaagcaatg gttgggcatg atgaaaaaaa cgttcgaccc
     9721 ggcgcaaacg ctgtttgacc gcgtccgaac ggttaaggat gcggatgaag tccgccgaat
     9781 cctgaacgca tttgagcatg agataaatgt ttgactgtct cccatgcttc aaagcaaatg
     9841 ccgtctgaaa atctttcaga cggcatttca tatctttatt gctgcttttc ttccgtatcc
     9901 ggcgtatttt tgtttttcag cttcgcaccc aagcccaaac gtttttcata atccgattgc
     9961 ggggtatcgt cttcctgcat accgaatgcg ccgacattga cccacagcga cagcagcgcg
    10021 acgacaaagg agcaaaagcc gattacatac caaaacattg cccctcccga tttgttaaaa
    10081 tcatatcaaa tacagtgccg aatttatcac aaacgcacgg gcaaatatag tgaattaaat
    10141 ttaaataagg acaaggcggc gagccgaaga cagtacaaat agagaccttt gcaaaattcc
    10201 ccaaaatccc ctaaattccc accaagccat ttaggggatt ttccatgagc accttcttcc
    10261 ggcaaaccgc acaagccatg attgccaaac acatcgaccg tttcccgcta ttgaagttgg
    10321 accaggt
//
LOCUS       DBBZXW010000064        10307 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.064, whole genome shotgun sequence.
ACCESSION   DBBZXW010000064 DBBZXW010000000
VERSION     DBBZXW010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10307
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.064"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(337..1383)
                     /gene="adhP"
                     /locus_tag="ACJJD2_001452"
     CDS             complement(337..1383)
                     /gene="adhP"
                     /locus_tag="ACJJD2_001452"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HGG7579963.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATYCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1666..2055)
                     /locus_tag="ACJJD2_001453"
     CDS             complement(1666..2055)
                     /locus_tag="ACJJD2_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HGG7579964.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVR
                     TTLLHNAQTMERYYRQKGTFKTYDKNKLKQNEYFDITLSEVSPDHFTLQADPNPTTND
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            2281..3459
                     /locus_tag="ACJJD2_001454"
     CDS             2281..3459
                     /locus_tag="ACJJD2_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HGG7579965.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITEAVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNSDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3525..5459
                     /locus_tag="ACJJD2_001455"
     CDS             3525..5459
                     /locus_tag="ACJJD2_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HGG7579966.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5777..6559)
                     /locus_tag="ACJJD2_001456"
     CDS             complement(5777..6559)
                     /locus_tag="ACJJD2_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HGG7579967.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAAKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6698..8887
                     /locus_tag="ACJJD2_001457"
     CDS             6698..8887
                     /locus_tag="ACJJD2_001457"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HGG7579968.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPQGMRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSIQTTFLDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     VKLIENWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQSGCPVVLGSATPSLESWHKVQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRVRQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADALEFLNAAKETLAPLLPASVSQFGAAPMLMVRLA
                     ERERAQIFLESPSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8934..9936)
                     /locus_tag="ACJJD2_001458"
                     /pseudo
     CDS             complement(8934..9936)
                     /locus_tag="ACJJD2_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
     gene            complement(9984..>10307)
                     /locus_tag="ACJJD2_001459"
     CDS             complement(9984..>10307)
                     /locus_tag="ACJJD2_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7579969.1"
                     /translation="ELGRLSHKRIASLAGIAPHPRESEETKFKSRCFGGRSAVRKALY
                     MATVVATRFKPLIRDFYQRLPSEGKPYKVAVTAYMRKLLTISNARMRDYFAENDTAEN
                     GIRTA"
BASE COUNT         2395 a         2667 c         2975 g         2270 t
ORIGIN      
        1 ggctgaatct tgccgttttt aatgaagtgt tgcgatacgg gttgtcagac ggtatagtga
       61 attaaattta aatcggtaca gcgttggctc gccttagctc aaagagaacg attctctaag
      121 gtgctgaagc accgagtgaa tcggttccgt actatttgta ctgtctgcgg ctcgccgcct
      181 tgtcctgatt tttgttaatc cactataatg acgtgttgcg ataagggttt tcagacggta
      241 tttcaaacag aacagattaa aatcaaatcc aaatccataa aaaatgccgt ctgaacagcg
      301 ttcagacggc atttcgatgt gtatcgccac gtcaaatcag tggtggtggc cgcagccgca
      361 ttcttttttc atatcgatta ccatacgacc ggtgattttg ccttcgcgca tttcttggaa
      421 aatggcgggt gcttcatcca aagcacgcag ttggactttc ggcacaacca aaccttccgc
      481 gccgaattgg aaggcttctt ccaaatcttt gcgcgtgccg accaaagagc cgaccacttc
      541 gatgccgtcc aaaaccaaac gcgggatgga caaatccatc gattccggcg gcagtccgat
      601 ggcaaccaca cgtccgcccg cgcggacgca attcacggca gagttgaatg cggcagcaga
      661 tacggcggtt acgaccgcag cgtgtgcgcc gcctgttttt tcctgaatca ctttggcagc
      721 gtcctctttg gcggcgttga caaccaaatc cgcgccggtt tctttggcaa acgccagttt
      781 gtcgtcgttg atgtcgatgg cgacaacgtg cgcgccgaat acttttttcg cgtattggac
      841 ccccaagttg cccaaaccgc ccgcgccgta gatggcaatc cactgtcccg gacgaacact
      901 ggaaacttta atggctttat aagtggtcac gccggcacaa gtaatgctcg aagcttgcgc
      961 aggatccaaa ccttcaggga ctttgaccgc gtaatcggca ctcacgatgc agtaggtcgc
     1021 cataccgccg tcggcagtat aacctgcgtt caatacagag cggcacaagg tttcgcggcc
     1081 ggtattgcag tattcgcaag aaccgcagct ttggaacagc caggcgatgc tgacgcggtc
     1141 gccgactttc agatttttca caccgtcggc aacttcttta accaaaccga tgccctcgtg
     1201 tcccagcacg cggcccggtt tttcgccgta gtcgcctgcc gcaacgtgca ggtcggtgtg
     1261 gcacacgccg caatattcga cttcgaccaa cgcctcgccg tattccaacg ggcgaacctc
     1321 gcgttcgact atttccacat cgcccgctac atttttattc acaacaactg cctgcatttt
     1381 catgattgcg ctccttagtt acggcaaaaa aacctgtaaa cggaatgttg tccgatataa
     1441 gggtaagcat acgcttccgc atctcacagg tcaagtggta tgttgttgaa aaatatagat
     1501 tatatgttat attataacat ctcggaaagg cacggcatcg gggcggttgc cggatgaggg
     1561 gcggcaggtt tcaagtttga aaaaccggac ggcaaacccg taaagatacc gtctgaagct
     1621 gtgtccggac ggcatcttta cgggtttgcg ggcttcggcg gaggattagt cgaagccggg
     1681 gcaggattgg tttgtaccgg aagcggcaat ggtaccgccg tcgttgagcg taacgacgca
     1741 ggtttcgccg tcgttggtgg tgggattggg gtcggcctga agggtaaagt ggtcggggct
     1801 gacttcgctt aaagtgatat cgaaatattc gttttgtttc agtttgtttt tgtcgtaggt
     1861 tttaaacgtc cctttttggc ggtagtaacg ttccatggtc tgcgcgttgt gcagcagggt
     1921 cgtcctgact tccgacaggc ggacgcgccg gatgtaggtt ttataggaag ggtaggtgat
     1981 gagcgtcagg atgccgagga tggcgacggc aatcatcagc tcgagcagcg taaagccttt
     2041 ttgaacgttt ttcatagcaa tgtgtttcca tttgtttgtc ggtcgacggc attataacgc
     2101 cgtatcggaa atggcggaat atgtaaacgg attgaaattt tcgggaaagc agattgtata
     2161 agccatttaa aacaaatggt tatttttatt gtcggcagtt tgccgccttg gatggggcag
     2221 ggacttgcgg tagaatccgc ttccgattta tgggattgac gcatacagag aattgaaaac
     2281 atggcaaaaa tgatgaaatg ggcggctgtt gcggcggtcg cggcggcagc ggtttggggc
     2341 ggatggtctt atctgaagcc cgagccgcag gctgcttata ttacggaagc ggtcaggcgc
     2401 ggcgacatca gccggacggt ttctgcaaca ggggagattt cgccgtccaa cctggtatcg
     2461 gtcggcgcgc aggcatcggg gcagattaag aaactttatg tcaaactcgg gcaacaggtt
     2521 aaaaagggcg atttgattgc ggaaatcaat tcgacctcgc agaccaatac gctcaatacg
     2581 gaaaaatcca agttggaaac gtatcaggcg aagctggtgt cggcacagat tgcattgggc
     2641 agcgcggaga agaaatataa gcgtcaggcg gcgttatgga aggaaaacgc gacttccaaa
     2701 gaggatttgg aaagcgcgca ggatgcgttt gccgccgcca aagccaatgt tgccgagctg
     2761 aaggctctaa tcagacagag caaaatttcc atcaataccg ccgagtcgga attgggctac
     2821 acgcgcatta ccgcaacgat ggacggcacg gtggtagcga ttctcgtgga agaggggcag
     2881 actgtgaacg cggcgcagtc tacgccgacg attgtccaat tggcgaatct ggatatgatg
     2941 ttgaacaaaa tgcagattgc cgagggcgat attaccaagg tgaaggcggg gcaggatatt
     3001 tcgtttacga ttttgtccga accggatacg ccgattaagg cgaagctcga cagcgtcgac
     3061 cccgggctga ccacgatgtc gtcgggcggc tacaacagca gtacggatac ggcttccaat
     3121 gcggtctact attatgcccg ttcgtttgtg ccgaattcgg acggcaaact cgccacgggg
     3181 atgacgacgc agaatacggt tgaaatcgac ggcgtgaaaa atgtgctgat tattccgtcg
     3241 ctgaccgtga aaaatcgcgg cggcaaggcg tttgtgcgcg tgttgggtgc ggatggcaag
     3301 gcggcggaac gcgaaatccg gaccggtatg agagacagta tgaataccga agtaaaaagc
     3361 gggttgaaag agggggataa agtggtcatc tccgaaataa ccgccgccga gcagcaggaa
     3421 agcggcgaac gcgccctagg cggcccgccg cgccgataaa cgaatatgcc gtctgaacac
     3481 ggaaacggtt tcagacggca tttgttattg atttacggaa tattatgagc ttgatcgaat
     3541 gtaaaaacat caaccgctat ttcggcagcg gcgagaaccg cgtccatatt ttgaaagaca
     3601 tcagcctgtc gatagagaag ggcgattttg tcgccatcat cgggcagtcc ggttcgggca
     3661 agtccacgct gatgaacata ctcggctgtt tggataccgc cggttccggt tcgtaccgaa
     3721 tcgacggcat cgaaactgcc aaaatgcagc ctgacgagct ggcggcattg cgccgcgaac
     3781 gcttcggttt catcttccaa cgctacaacc tcttaagctc gctgaccgca agggacaacg
     3841 tcgcgctgcc agccgtgtat atgggcgcgg gcggcaaaga gcgttccgcg cgtgcggaga
     3901 agttgttgca ggatttgggt ttggcaagca aagagggcaa caagcccggc gaactctcgg
     3961 gcggacagca gcagcgcgtc tccatcgccc gcgccctgat gaacggcgga gaaatcatct
     4021 tcgccgacga gccgaccggc gcgctcgata ccgccagcgg caaaaacgtg atggaaatca
     4081 tccataagct gcacgaagcc gggcataccg tcattatggt cacgcacgac cccggcatcg
     4141 ccgccaatgc caaccgcgtc atcgaaatcc gggacggcga aatcatttcc gacacctcga
     4201 aaaatccaga aatccccgca agcaatgtcg ggaggattca ggaaaaagcc tcgtggtcgt
     4261 tttattacga ccagtttgtc gaagccttca gaatgtcggt gcaagcagta ttggcgcaca
     4321 aaatgcgttc gcttctgacg atgctcggca tcatcatcgg tatcgcttcg gttgtctccg
     4381 tcgtcgcatt gggcaatggt tcgcagaaaa aaatccttga agacatcagt tcgataggga
     4441 cgaacaccat cagcatcttc ccggggcgcg gcttcggcga caggcgcagc ggcaggatta
     4501 aaaccctgac catagacgac gcaaaaatca tcgccaaaca aagctacgtt gcttccgcca
     4561 cgcccatgac ttcgagcggc ggcacgctga cctaccgcaa taccgacctg accgcttctt
     4621 tgtacggcgt gggcgaacaa tatttcgacg tgcgcggact gaagctggaa acggggcggc
     4681 tgtttgacga aaacgatgtg aaagaagacg cgcaggtcgt cgtcatcgac caaaatgtca
     4741 aagacaaact ctttgcggac tcggatccgt tgggtaaaac cattttgttc aggaaacgcc
     4801 ccttgaccgt catcggcgtg atgaaaaaag acgaaaacgc tttcggcaat tccgacgtgc
     4861 tgatgctttg gtcgccctat acgacggtga tgcaccaaat cacaggcgag agccacacca
     4921 actccatcac cgtcaaaatc aaagacaatg ccaataccca ggttgccgaa aaagggctga
     4981 ccgatctgct caaagcgcgg cacggcacgg aagatttctt catgaacaac agcgacagca
     5041 tcaggcagat agtcgaaagc accaccggta cgatgaagct gctgatttcc tccatcgccc
     5101 tgatttcatt ggtagtcggc ggcatcggcg tgatgaacat catgctggtg tccgttaccg
     5161 agcgcaccaa agaaatcggc atacggatgg caatcggcgc gcggcgcggc aatattttgc
     5221 agcagttttt gattgaggcg gtgttaatct gcgtcatcgg cggtttggtc ggcgtgggtt
     5281 tgtccgccgc cgtcagcctc gtgttcaatc attttgtaac cgacttcccg atggacattt
     5341 ccgccatgtc cgtcatcggc gcggtcgcct gttcgaccgg aatcggcatc gcgttcggct
     5401 ttatgcctgc caacaaggcg gccaaactca atccgataga cgcattggcg caggattgag
     5461 gttggacaaa gatgccgcct gaagctgcag aaccggtcat tttggagcag aaacttattg
     5521 gacaaaaacg gtttcttaga ttctacgttc caaattccca cttgcgtggg aatgacggcg
     5581 gtgtgtttcg tattgttcaa tttattattt tcaatcattc aatgggttag gatgtgtttg
     5641 ttggcttgct gtactggttt aaatttaatc cactataaat ttaatccact ataactttca
     5701 gtgcggattg gttttcaggc ggcatttccc gcaaaaaagg cttggaattt tccaagcctt
     5761 ttgttttgcg gatggattat tgatttttgc ggatgatttc ctccagttgg ggcatcgggc
     5821 tgtagccgct ttggctgcgc ccgttgggga agacgagggt cggcgtgccg ttgaagccga
     5881 attgttcgcc caaggaagtg gtttccgcga cgggattgtc gcagatgctg ccgccgaccg
     5941 ggaatttgcc tttacgcatc caatccgtcc acgctttggc gcggtcgggc tgacaccata
     6001 agatttgcgc cttgcgcgcg gcatcggggt gcaggccggc aatgggcatc ataaagctgt
     6061 aaaccgtcac gtcggtcatt ttttcaaact cgtgttccaa gcgtttgcag aacggacaat
     6121 cggggtcgga gaagacggcg actttcagct tgccgttgcc gcgcacttct ttgatggctt
     6181 tgtccaaagg cagggaggcg aagtcgattt tgttcaaatc ggcggcgcgt tcttcggtca
     6241 ggtttttgcg cgtgtcgatg ttgatgagtt cgccgacgaa catatagccg ccttcggcat
     6301 cggtgtagat aatctgtctg ccgctgacga cgacttcgta aatgcctttg accggtgttt
     6361 cgctaacgct caacactttc aaatcttggg cggaataggt tttttccaaa cgcgctttca
     6421 aagaggcggc aacggatttg ccggcggact cggctttggc ggcgggttcg gcgttggcat
     6481 tggaaacggg cgtttgcccg caagccagca gcgggaggac ggtaaagggg gtcaagattt
     6541 tgattaactt ggttttcata taaagatgat tgcgcgtgtt ggaaaagcgg aattgtatca
     6601 aatctctgtt gcgcctgcat tgcgcctagg ctcaatttat cgtctgaaaa tagcttccgc
     6661 ctgttaaaat acgcaaaaaa atgatttgcc tgcctgtatg atctaccacc gtatcgccgt
     6721 aaacgtgccg ctttcagacg gtcttttaac ttattcccat tccgagccgc tgccgcaggg
     6781 aatgcgggtg cttgtgcctt ttcgcaataa aaccgtggtc gggatggtgt gggaaacgga
     6841 tattgcgccg gatatggata cggcgcggat tttgagtatt cagacgacct ttttagacga
     6901 gccgccgttg cctgaaagct ggcgtgattt gctctcgttt acgtcgcgtt attaccacta
     6961 tccgacgggg caggcggtgt ttgccgcgct gccgcagggt ttgaaggaaa cgcgcgcggt
     7021 ggaaatgccg cagccgccgt tgttttacgc gctgaacgaa gcgggcaggg cgcaaacgcc
     7081 gccgccggcg cggttcaaca aaaaagcggc tttgtgggac gcgctgctgt cgggcgaaat
     7141 gacgatggca gcgttgaagc aggtaaacgc gcaggcggtg aaattaatcg aaaattgggc
     7201 ggaacagggt tggattgaaa cgacggaagc ggcgaagccc gttttaaggt cgtgtaatgg
     7261 gcaggcttcg cactctgaat ttgtattaaa tgctgaccag cagaaggctt ccgatgccat
     7321 tcagacggca ttgggacgct tccagccgtt tctgctgtac ggcatcaccg gcagcggcaa
     7381 gaccgaggtg tattttgatg cgatggcgaa agtgttggct caggggcggc aggtgttgtt
     7441 tctgttgccc gaaatcaacc tcacgccgca gcttttgaag cgggtagaaa accgttttgc
     7501 cgacgtgccg accgccgtgt tgcacagcca gatggcggca ggcaggcgca cgcaagatta
     7561 tttgcgcgcg atgttggggc aggcgaaatt agtcatcggc acgcggctgg cggtgttcac
     7621 gccgatggat gatgtcgggc tgattgtggt cgatgaggaa cacgacggct cgttcaaaca
     7681 agacaacgaa ttacgctacc acgcccgcga tttggcggtg tggcgggcga agcagagcgg
     7741 ctgccccgtc gtgctgggta gcgccacgcc cagcttggag agctggcaca aggtgcaaag
     7801 cggcgcgtac cgcctgctgc aactgaccga gcgcgcccat accgctgcgc aactgccgca
     7861 agtggacatc ctcaacgtag gccgtctgaa actagacaat ggcttctcgc cgcaagcctt
     7921 gcagcttttg aaacagaatt ttgaagcggg cggtatgtcg ctggtgtacc tcaaccgtcg
     7981 cggcttcgcg cccgcgctgt tttgcggcga ctgcggccat accttcggct gcccgaactg
     8041 ctccgccaaa atggtgctgc accaacgcgt ccgccaactg cgctgccacc actgcgacca
     8101 ccgcgaaccc ataccgttca aatgccccga ctgcggaaat caagacctga ccgccgtcgg
     8161 acacggcacg cagcgcgtcg aagaaaccct gcgcgccttc ctgcccaagg cagccgtcgt
     8221 ccgcgtggac agggacagca ccgcgcacaa aaacgactgg gcggatttgt accgccgcat
     8281 cgccgacaac gaaatcgaca ttctggtcgg cacgcagatg ctcgccaaag gccatgactt
     8341 tgcgcggctc aacctcgtta tcgtattgaa cgccgacggc agcctttaca gcgcggattt
     8401 ccgcgcgccg gaaagactgt tcgccgagct gatgcaggtg tccggcaggg cggggcgcgc
     8461 cgacaaaccc ggcaaggtgt tgatacagac ccaactgccc gaacatcccg tcttcgccgc
     8521 cgtcaaagcg caggattatg ccgtgtttgc cgaaaacgaa ttgaacgaac ggcaaatgtt
     8581 cgccatgccg cccttcggtt ttcagaccgc cgtccgcgcg gacgcgccgc gtgttgccga
     8641 tgcgctggaa tttctcaatg ccgccaaaga aaccctcgcc ccgctgttgc ccgcaagcgt
     8701 ttcccagttt ggcgccgccc ccatgctgat ggtgcgcctc gccgaacgcg aacgcgcgca
     8761 aatcttcctc gaatccccgt cccgacagga tttgcaccgt gccgtgagtt tgtgggtgca
     8821 ggtgttgcag caaaaccgcg acggcaaaat tagatggtcg gtggatgtcg atccgcagga
     8881 ggcttgatta tcggcaatac gatgccgtct gaaaaccgtt tcagacggca tttttattcc
     8941 ggatcgtctg taaacgcgtt cgcccgaaag atcggtacga atgtcagcag gtaaagcacg
     9001 aacacggcgg cggcgaaaag gatggggacg gcgatgcggc agagtttcgg gtagtcgagc
     9061 ttggtaaagc cgctgtgcca cagtccggca gtcagccaca ccatcatcac gccgcccatc
     9121 atgccgccga gggtaatcag gtgcaggggc gcggaggcag gcaggttttg caatttcgcc
     9181 gcgcctgtcc acaaatagcc tgcggcggca aaaagttgga gcaggtaata agtgcggacg
     9241 tagtgtttgc gtaagagttc gtgatggtgc agttcgcgca gcttggcgag caagatgaag
     9301 ccgacggcga gcgcggtaaa accggcggtt tgcgcgggca gccaaagttc ggcggcggcg
     9361 tgcagcagca ggaaggtgat ggcgatgttt ttatagacaa cgttggggat gaatacaggg
     9421 tctttcagac ggcatttttt gagggcttcc gcgcccagaa ggacactgac gcggacggat
     9481 acgaacatga ccgccgccat attcaaatgc acttgcgcgc gcaacaggtt caaatcgccg
     9541 gttgcagcgt atgccgtctg aaaaacagtg aacgcggcaa gcagcattaa gagggcgaag
     9601 ttgtcggtgt ttcggtctag ccaaatcagc cgggcgcaga acagcagcaa caccagccaa
     9661 taggcggcga cgaaaaacga ggcagtttgc ggcgaaaagg gcagtatagc ggatgcggcg
     9721 agcaataatg ccgccatcaa agtcgcgaca ggtttcaggt tacccgaaaa aacccgtcca
     9781 gtccaacaaa gccgcagtca ggaaaccacc atatgctgca ggcagcatga gttctaagaa
     9841 gatttggcgg tgcaggacga cggcaccggg gctgatgaaa aacaccaacg cgccgagtat
     9901 ggcaagcact gtcgcgccga cgaaaaacgg gcgcatagca actgtatttt tcaccccgtc
     9961 gggcaaaaat accaaaactc aaatcaagcc gtccggatac cgttttcggc ggtatcgttt
    10021 tcggcaaaat aatcacgcat ccgggcattc gatatcgtca gcagtttgcg catatatgcc
    10081 gtaacggcaa ccttatacgg cttaccctcg gacggcaggc gttggtagaa atcccgaata
    10141 agcggtttaa aacgtgtcgc taccacggta gccatataca gcgccttacg taccgcagac
    10201 cttccgccga agcagcggct tttgaatttg gtttcctcgc tctccctcgg gtgcggggca
    10261 atgccggcca aactcgctat ccgtttgtgc gacagccgcc ccaactc
//
LOCUS       DBBZXW010000065        10301 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.065, whole genome shotgun sequence.
ACCESSION   DBBZXW010000065 DBBZXW010000000
VERSION     DBBZXW010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10301
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.065"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            142..588
                     /gene="yciA"
                     /locus_tag="ACJJD2_001460"
     CDS             142..588
                     /gene="yciA"
                     /locus_tag="ACJJD2_001460"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HGG7579970.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVDVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
     gene            complement(639..1460)
                     /locus_tag="ACJJD2_001461"
     CDS             complement(639..1460)
                     /locus_tag="ACJJD2_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7579971.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDERAAGVYEGVEFIRPEDIAETALW
                     LYQRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1730..2188
                     /locus_tag="ACJJD2_001462"
     CDS             1730..2188
                     /locus_tag="ACJJD2_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7579972.1"
                     /translation="MNIQTRLAATALALFLSACGNGGAPAQPKGEISENRTAAFKSMM
                     PEFTRMGKMVKDEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2352..3467)
                     /gene="lst"
                     /locus_tag="ACJJD2_001463"
     CDS             complement(2352..3467)
                     /gene="lst"
                     /locus_tag="ACJJD2_001463"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HGG7579973.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            3902..6127
                     /locus_tag="ACJJD2_001464"
     CDS             3902..6127
                     /locus_tag="ACJJD2_001464"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HGG7579974.1"
                     /translation="MTQKSTIIYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWAKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVVDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKTGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAKSLAENEAKIVEELSAVQGKAVDIGGYYAANPEKAAQAMRPSATFNQALST
                     L"
     gene            6270..6578
                     /locus_tag="ACJJD2_001465"
     CDS             6270..6578
                     /locus_tag="ACJJD2_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579975.1"
                     /translation="MKTVPTILISILLATALPASAHGIHKSKPLTMDELPPICQQYFK
                     RAETCYNKAGNKANFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRISNSNAV
                     "
     gene            6568..6720
                     /locus_tag="ACJJD2_001466"
     CDS             6568..6720
                     /locus_tag="ACJJD2_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579976.1"
                     /translation="MPSETMISDGILTSKRTSLIKPAFPASLTRTGLNEVTALTIMAS
                     SHSQKL"
     gene            7199..7330
                     /locus_tag="ACJJD2_001467"
     CDS             7199..7330
                     /locus_tag="ACJJD2_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579977.1"
                     /translation="MQNQNTRPVKIELKGEAGKRVLLAAARRIAKTHQKAVKALADK"
     gene            7327..7695
                     /locus_tag="ACJJD2_001468"
     CDS             7327..7695
                     /locus_tag="ACJJD2_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HGG7579978.1"
                     /translation="MIDGELVALIHQTVLADEAGLKGRADMARLDGALSRIANWRQYE
                     NLEDIYEIAALYAQAIAKAHAFPDGNKRTALLTMLTYLDLQGISIAADQGLDDLIVSL
                     AAGETDFKQLAETLRRLDKE"
     gene            7711..7881
                     /locus_tag="ACJJD2_001469"
     CDS             7711..7881
                     /locus_tag="ACJJD2_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579979.1"
                     /translation="MPSEIQTAFLLKGFSSTALHKGGFFMPSESPSDGIGLHGRSSPA
                     FKQERMSRMPDF"
     gene            8133..8624
                     /locus_tag="ACJJD2_001470"
     CDS             8133..8624
                     /locus_tag="ACJJD2_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HGG7579980.1"
                     /translation="MFWQLTVVSVTAVIALGTIFINKKTSKQKATLDVILNDYQDAQF
                     VEADNHISPYIRGTAVDDNNARIDLYEIYQNKGGQWEKERGHLLTVINRHEFYACEIN
                     SGVLDEDLFKRLHCTNFIKLWNAVSPLVMKIREEERKDTIFRELEILVALWKANPLKA
                     SDL"
     gene            8983..9219
                     /locus_tag="ACJJD2_001471"
     CDS             8983..9219
                     /locus_tag="ACJJD2_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HGG7579981.1"
                     /translation="MLRVQKWGNSAAVRLPADMLKQLDFKIGDALVAEVHNGELRVRA
                     ARRFRLADLLAEMEETPPRVEGWEILDDVGNEVV"
     gene            9221..9568
                     /locus_tag="ACJJD2_001472"
     CDS             9221..9568
                     /locus_tag="ACJJD2_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7579982.1"
                     /translation="MYIPDKGDIFHLNFDPSGGKEIKGGRFALALSPKAFNRATGLVF
                     ACPISQGNAAAARSGGMISTLLGAGTETQGNVHCHQLKSLDWQIRKASFKETVPDYVL
                     DDVLARIGAVLFD"
     gene            complement(9621..10130)
                     /locus_tag="ACJJD2_001473"
     CDS             complement(9621..10130)
                     /locus_tag="ACJJD2_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579983.1"
                     /translation="MDILLKYWKPVGVLLLIVLIFTAWHFDRAEKYRMGREAAAAEIS
                     NRLKDGYIEQAKQARSAEQKAAAAFAERQTKLEEEKQNAEKTVAAMRLELNRLRHYAA
                     AQNRSRNLPATTTAATASDGASDSQGWLLFGQCAEKYAGLAETADGHAADLREWQAYG
                     HAVSSQRAE"
BASE COUNT         2795 a         2795 c         2335 g         2376 t
ORIGIN      
        1 cccaccctac aatacgcctt gcgaatctgt tccgcgcccg cccttgtatg tctcaaatgg
       61 gttaaactac acacttcccg acttcccgtt tcgggcaggg gtgcaggttc gatttatatt
      121 tcaataaaac aaggaaactt tatgcagcac gaagaaggca accgccaacg ccctcaaggc
      181 gaactgctcc tgcgtaccgt cgctatgccg cgcgatacca atcccaacca agacattttc
      241 ggcggctgga ttatgtcgca gatggatttg ggcggcggca tattggcggc ggaaatcgcg
      301 cggggacgca tcgttaccgt cgccgttcag gaaatgaact tcatccgccc ggtcaaggtc
      361 ggcaacgtcg tctgctgcta cgggcattgc gtccgcgtgg gcaacacttc cctccagctt
      421 aaagtcgacg tctgggtgaa aactttgatg aacgattgcg ttaccgaaga ccgctacctc
      481 gtaaccgaag ccgtgttcac ttatgttgcc atcgatgcgg aaggcaatcc gcgcccgatt
      541 ccgaaagaag gcaaccccaa attggcgggc ttattgccta ctccgtaaaa atacccgtaa
      601 aaatgccgtc tgaaactgtc ttcagacggc attttgcatc atttgaacca ggacctgatg
      661 cgggaaaaca gcgacatact ctgtttttca aagtcttccc gcacttcggg cacggctttt
      721 tttatcactt tcattcctgc aaaagtctgc gccacgggca taatttcaat cgtgttcaca
      781 ttcatatgcg ccggccgctg gtacagccac aatgcggttt ccgcaatatc ttcggggcgg
      841 ataaattcca caccctcata cacgcccgcc gccctctcgt catcgccttt gaagcgcaca
      901 ttggaaaact ccgtattgcc gcacaaaccc ggctcgatat tggtaacgcg gatgttctta
      961 tccgccaact ccgcgcgcaa attcaggctg aactgccgca caaacgcctt ggtcgccccg
     1021 taaacgttgc tgccggcata agcataattg cctgcaatcg aacccaaatt catcacatag
     1081 ccgccgccgc gttccaccat ttgcggcaaa attttgcgcg tcaggaacgt caaacccaaa
     1141 acattggttt gaatcatcgt ttcccaatct tcaaaatccg ccttgtccgc cgtgtccaga
     1201 cccaaagcca gcccggcatt gttgatgagg cagtcgatgt cggaaaattc atcggggatg
     1261 ccgtttaagg cgttttccac cgactcgcgt cgcgacacgt ccatttccaa agggtaaaac
     1321 aaagcaccca attcatccgc caaggcctga agcctgtccg cacggcgcgc cgcaccgata
     1381 acgcggtatc ccgccccgac aaacgcgcgg cacatcgctt cgccgaatcc tgccgaagca
     1441 ccggtaatta aaacagccat tgtttttcct ttctttctcg tttcccaaac ctgtttcagg
     1501 tatcataacg ctcttcagac ggcatcgcgc cggctgaaaa tgacaacaac cataccacca
     1561 cgacaggaca cattcaatat gtttcaacac acaggacggc acataaagcg tcgccctatg
     1621 tgccgtcctg attcggaagg gattgcaccc ttcccaaata aaatctgatt ctaccgcccc
     1681 gaaggacgga tgtccaagtg ggcggggttt caaccgaaaa ggaaacacga tgaatattca
     1741 aacccgcctt gccgcaaccg ccctcgccct attcctttcc gcctgcggaa acggcggcgc
     1801 gcccgcacag cccaaaggcg aaatttccga aaaccgcacc gccgcgttca aatccatgat
     1861 gcccgaattc acacgcatgg gcaaaatggt caaagacgaa gaaccttacg atgtcgaaaa
     1921 attcaaacag gctgccgcgg cgtttgccga aagcagcaag aaaccgttca cactttttga
     1981 gtccgatccg caaggcaacg gccgcgccct gcccgccgtt tggtcggatg gtgcaaaatt
     2041 tgaagccgaa aaaacaaaat tcgccgccgc cgtcgaaaaa ctcaacgccg cagcacaaac
     2101 cggcaaactg gatgaaatca aagccgccta cggcgaaacc ggcgcaagct gcaaatcctg
     2161 ccacgacagt ttccgcgcgc ccgaataaca tccaaaacaa aacaatgccg tctgaagcct
     2221 tcagacggca ttttctttgc catttcacca agcgcaaagc aatcaaaaat tatcgttaat
     2281 tcaaaaaata cgccatatcc tgatttttgc cttacttact ccgccatttt ctatttttat
     2341 ttgctatgcg attaatcttt atcgtcaaat gtcaaaatcg ggatgccgga ttgggtaaac
     2401 agggcataca ccggcttgag ccaataatct tccggaaggg aagccggttt caatgcgtaa
     2461 acgtgcacat tgggaaaatc cttcatcgtc aacgccgcgc cgctgaaaaa ggtataaatt
     2521 tcatacctcg tatgcgggtt tttcttaatc tcgcgcaaaa tatagtcttc gatgacatag
     2581 ggcgaattta atgtggttac gccggaaagc ccgtaggttt ggcgggggtg cggtgcgaca
     2641 tattgtatgt tgaagttttt tgccgccttt tccgaaattt ccttcatctc cttgtcgggc
     2701 gaacccaaaa gtatccgcac cgtgccgccc gtttcgtccc ccgccttcag ttcggacgca
     2761 tcgaacagcg gcaggtaagt catcttgcgg cggccgtcgt ccataatgtt tttcaaaccc
     2821 ttgaatatcg tgtaatgctc gtcggaagca ttgcgggttt tggcgatgct ccaatctccg
     2881 atcatcatcc gggcaaaatt ccgcttgatc gtcccgttta cagaaaactc atcgcccaaa
     2941 tagctgctgc tttgaattaa attgattgtc ccgtcgtcaa aggttttgat ttccgcatcc
     3001 gggtaagtgc tcaaaaaggc ggcaatgctg actttttcca aacttgccaa ataaatccgc
     3061 ttgactttcg gcagcagcat cgactttacc ttcagctccg ccatcgtcgg aatgaaatta
     3121 aacgatttgt tcaaaccgta gggcaggtgg aaaaaatacg cccgctccgc cttatccttt
     3181 atctgattga aataataatc gtatttttca ttcctgtttt cagacatcag caccacataa
     3241 aaccgctccc ccggatgctg cgccataatc ctttctgcca ccttcatctg caatatggta
     3301 tagcagaaaa tcagattgac cggttccccc tcttcattga agagtttgtc cttcagcagg
     3361 gaaaccgcat tcctttcccc ctgatttacc cggtcaaatg tataaaatat cccgaaacaa
     3421 aaaacaatca ggcacaacac ggtcaaacaa gcctttttca agcccatatc cctaaaactc
     3481 cattccgaca aattgaacat acgccccgag tgtcccggga cggaaaaatg cggaatttta
     3541 gcagatattc cgacagttac cgaatattat agtgatttaa atttaaatca ggacaaggcg
     3601 acgaagccgc agacagtaca agcagtacga caaggcgagg caacgctgta ctggtttaaa
     3661 tttaaaccac tataaaatca atttcaccga aaatatgccg ccgcacatca ggcacagcac
     3721 ctccgacacc gccgccaaaa gcgggaaaac catttccccc ttcctttcac gtcgccgcgt
     3781 tcaaacacgc caagatcgaa caaagcgcga acaaagccgc caaaatatgc cataatagcc
     3841 acgcacattc cccgcgcaat gtgttccaaa agaaaaaacc aacctacaag agaataatcc
     3901 tatgactcaa aaatccacca ttatttatac ccataccgac gaagcccccg cgctggcgac
     3961 ccaatcgctg ctgccgattg tgcaggcttt tgcccgccac gccgatattg atgtcaaaac
     4021 tgccgacatt tccctgtccg gccgtatttt ggcggcattt cccgaatatc tgaccgaagc
     4081 gcagcgcgta cctgatgcgc ttgccgaatt gggcgaactg gtgaaacaac ccgatgcaaa
     4141 cgtaatcaaa ctgccgaaca tcagcgcatc cgtaccgcaa ctgactgccg cgattaaaga
     4201 attgcagtct aaaggctttg ccgttcccga ctatcctgcc gaccctcaaa ccgatgaaga
     4261 aaaagccgta cgcgaacgct acgaccgcat caaaggcagc gcggtaaacc ctgtcctgcg
     4321 tgaaggcaac tccgaccgcc gcgcccccaa agcagtgaaa aactttgcca aaaaaaatcc
     4381 gcacagtatg ggcgcgtggg cgaaagactc caaaacccac gttgccacca tgcaaagcgg
     4441 cgactttttc cataacgaac aatccgttac cgtacccgaa gcgacttccg tatccatcgt
     4501 gttcaccgac aaacaaggca acaaaaaaga gctgcgcgcg cctgttgccc tgaaagccgg
     4561 cgaaatcatc gacgcaaccg tgatgagcaa aaaagccctg ctcgccttcc ttgccgaaca
     4621 agtgaaagac gcgaaggcaa aaggcgtatt gttctcactg catatgaaag ccacgatgat
     4681 gaaagtgtcc gacccgatta tcttcggaca cgccgtcaaa gtgttcttcg cgcctgtatt
     4741 tgaaaaattc ggcggcaaac tggctgccgc aggtgtcaac gtcaacaacg gtttcggcaa
     4801 cctgcttgcc aatctggaca aactggatgc ggacacccgc gccgccgtcg aagctgaaat
     4861 cgccgccgtt tacgccgcca accctgattt ggcgatggtt gattccgaca aaggcatcac
     4921 caacctgcac gttcccagcg atgtcatcgt cgacgcttct atgcctgcga tgattcgtaa
     4981 ttccggccgt atgtgggaca aaaacggcaa agcacaagac accaaagccg tgattcccga
     5041 cagcagctat gccggcgttt accaagcaac catcgacttc tgccgcgaac acggcgcatt
     5101 tgacccgaca accatgggta ctgtgcccaa cgtcggactg atggcgcaag cggcggaaga
     5161 atacggctcg cacaacaaaa cctttgaaat cgaagccgac ggtcaggttc aagtagttga
     5221 tgcggcagga aaagtcctga tgcagcacga cgttgaagca ggcgacatct ggcgtatgtg
     5281 ccaaaccaaa gacgctccgg ttaaagactg ggtacaactc gccgtcaacc gcgcccgcct
     5341 gagcaatacg cccgccgtgt tctggctcga cgaaaaccgt ccgcatgaca agagcctgct
     5401 cgccaaggtt aaagcctacc ttgccgaact ggataccaac ggcctcgaca tccgcgtcct
     5461 cgctcccgaa gaagccgcca agttcagcct gggccgtctg aaaaacggcg aagacaccat
     5521 ctccgtaacc ggtaatgtct tgcgcgacta cctgaccgac ttgttcccga ttttggaact
     5581 cggcacaagc gcgaaaatgc tgtctatcgt tccattgatg aacggcggcg gtatgtttga
     5641 aaccggcgcg ggcggttctg caccgaaaca cgtccaacaa ttccttgaag aaaaccactt
     5701 gcgttgggac tctttgggcg aattcctcgc gctcgccgta tcgtttgaac atttggcaca
     5761 aaaaaccggc aacaccaaag cccaagtcct cgccgacact ttggatgccg ccaccgaaaa
     5821 actgctgcta aacgacaaat cgcccaaacg caaaaccggc gaactcgaca accgcggcag
     5881 ccatttctac ctcaccctct actgggcgca agaattggcg gcgcaagaca aagatgccga
     5941 attgaaagcc gcatttgcgc cgttagccaa atcgttggcg gaaaacgaag ccaaaatcgt
     6001 tgaagaactc tctgccgtac aaggcaaagc ggtcgacatc ggcggctact acgccgccaa
     6061 tcctgaaaaa gcggcacaag cgatgcgccc aagcgcaacc tttaatcagg cactaagcac
     6121 cttataagca caaaggtaaa aatgccgtct gaacattcgt cgttcagacg gcattagtta
     6181 ttcctatctg cctgattatg attaaacgcc gcacccattg gatataaatc atataatctt
     6241 tagtttttac cctaggaaaa gacaataata tgaaaactgt tccaaccatc ctgattagca
     6301 tccttttggc aaccgccctt cctgcatccg cacacggtat acataagagc aagcccctga
     6361 ctatggacga gctgccgccg atttgccaac aatatttcaa acgcgccgaa acctgttaca
     6421 acaaagccgg caacaaggca aattttgcac gcaacaacac taaattccta ttccaagccc
     6481 tgcctgctgc cgatttggga cagcgtaagc aaatgtgcca aatcgctatg gattcgtttg
     6541 cagaaaaaac ccgcatcagc aatagcaatg ccgtctgaaa caatgatttc agacggcatt
     6601 ctcacatcaa aacgcactag cttgataaaa cccgccttcc ccgcatccct gacccgaaca
     6661 ggattaaacg aagtaacggc tttaaccatt atggcaagtt cccattctca aaaattatag
     6721 cggattaaat ttaaaccagt acggcgttgc ctcgccttgc cgtactattt gtactgtctg
     6781 cggcttcgtc gccttgtcct gatttttgtt aatccactat accatataaa ttaccataaa
     6841 actgtgatca aagcatctgc cgattgcggt ttattgcagg gcgttacgga aaataagcat
     6901 aatccaatga ttcttttatg gtaattgtgc agattcgcgc caaaaagaac cgccctgaat
     6961 cagggcggtt ttgttttctg gcggaaacgg tgggattcga ctaaatttta ttttattgat
     7021 ttaaatatat ttattctttg tgaaaattta atttaccata aaaacagcca tatacaaaaa
     7081 tcttggagta actattgcat tacactatta gaagaatgcc gtctgaagtg ttttcagacg
     7141 gcatttccca agctgccgga aaaaagctaa aatgcccgca aacagacaag gagcagcgat
     7201 gcaaaaccaa aatacacgcc ccgtcaaaat cgagcttaaa ggcgaagcag gcaaacgcgt
     7261 actgcttgcc gccgcccgcc gcattgccaa aacccatcaa aaagccgtca aggcacttgc
     7321 cgacaaatga tagacggcga actggtcgcg cttatccatc aaaccgtatt ggcggatgaa
     7381 gcgggtttga aagggcgggc ggatatggcg cggctcgacg gcgcattgtc gcggattgcc
     7441 aactggcggc agtatgaaaa ccttgaggac atctacgaaa tcgccgccct ttatgcacaa
     7501 gccatagcca aagcccacgc ctttcccgac ggcaacaagc gcaccgcgct tttaacaatg
     7561 ttgacctatc tggatttgca gggcatcagc attgccgccg accaagggct tgacgacttg
     7621 attgtcagtt tggcggcggg ggaaaccgac ttcaaacagc tcgccgaaac cctgcgccga
     7681 ctggataagg aataggcata tccgacaaca atgccgtctg aaattcagac ggcattttta
     7741 ttgaaaggct tttcttcaac cgctttacac aaaggcggtt tttttatgcc gtctgaaagc
     7801 ccttcagacg gcattggttt acacggcagg agttcccccg cctttaagca ggagaggatg
     7861 tcaaggatgc ctgattttta aatcacccct tgaaagaacg ggcgcacggc attaatatac
     7921 agatatcgac aagcaaggtt acaaccatta aggaaatacg atgaaataca aaaatgaggg
     7981 ttttaatggc tggtaaggtg cggaaacaaa taaaacaagg aggttggttg tcagtaattg
     8041 ccctaacctc cttgtttgta tctgtattca ctttatttta catattcagg cacagcgtac
     8101 agtttaacct atgagggacg gccgaatggc tgatgttttg gcaactgacc gttgtttcag
     8161 taaccgccgt cattgcactg gggacaatat tcatcaataa gaaaacttca aagcaaaagg
     8221 cgacattaga tgttattttg aatgattacc aagatgcaca atttgtagaa gccgacaatc
     8281 atatttcgcc ttatattcgc ggcacggcag ttgacgacaa caacgcgcgg atcgacctgt
     8341 atgaaattta tcaaaataag ggcggacaat gggaaaaaga gagagggcat ttacttaccg
     8401 taatcaatcg gcacgagttt tatgcgtgcg aaatcaactc gggagtattg gatgaggatt
     8461 tgtttaaacg gctgcattgc accaacttca taaaattgtg gaatgcagtt tcgcctcttg
     8521 ttatgaaaat acgcgaagaa gaacgcaaag acacaatatt tagagagttg gaaattttgg
     8581 ttgcattatg gaaagcaaac cccctaaagg catctgattt gtgaataaac agtcaaaact
     8641 gttctgaaat atgggcagcc acgcaatcgc cgaaatacgc caaagcagcc ttataaagtg
     8701 attttttgaa cataattttc tccttgcgga gcattttcca atcaaacagt tttagtttac
     8761 ttggttttgt atccctaaac aaccgaaatc cgacatcaag caattagaaa gcttttgcat
     8821 cttgaaaatg gataacaaaa tattgcctga aggcgcaaat acagtacaaa agccgtccga
     8881 aacagttcgg acggcttttg gcgtattctg cacaagtatt tgaacaactg aaattttatg
     8941 gtaatatgta tctactttgt agatacaata aaggtgaaga ttatgttgcg tgtccaaaaa
     9001 tgggggaact cggcggccgt ccgactgcct gccgacatgc tgaaacaatt ggattttaaa
     9061 atcggcgacg ctttggtagc ggaagtacat aacggcgaac tccgtgtgcg tgctgcccga
     9121 cgtttccgct tggcagactt gcttgccgaa atggaagaaa ccccgccgcg cgtagaaggc
     9181 tgggaaatct tggatgatgt cggcaacgag gtcgtctgaa atgtatattc ccgacaaagg
     9241 cgatattttc catttgaatt tcgacccttc cggcggcaag gaaatcaagg gcgggcggtt
     9301 tgcgctggct ctgtctccaa aagcattcaa ccgcgcaacg ggattggttt ttgcctgccc
     9361 catttcacag gggaatgcag cggctgcacg aagcggcggc atgatttcaa ccttactcgg
     9421 tgcaggaacg gaaacgcagg gcaatgtcca ctgccaccag ctcaaatctc tggactggca
     9481 aatccgcaag gcttctttta aagaaactgt acccgattat gtattggacg atgtgctggc
     9541 gcgcatcggc gccgtcttat tcgattaaat gctgaaaccg cccgaacctg taatcttttc
     9601 ttacaggttc gggcggttgc ttattcggca cgctgactgc ttactgcatg accatatgcc
     9661 tgccattccc ttaaatcggc tgcatgtccg tcggctgttt ctgccagtcc tgcatatttt
     9721 tcagcgcact gtccgaataa tagccagcct tgggaatctg acgcgccatc agatgcggtg
     9781 gcggcggtag tggttgcggg caggtttctg ctgcgatttt gggcggcggc gtagtggcgc
     9841 aggcggttaa gctcaagacg catagcggca acagtttttt cagcattttg tttttcctct
     9901 tctaatttgg tttgtcgttc ggcaaacgcg gcagcggcct tctgctcggc agaacgcgcc
     9961 tgctttgcct gctcgatata gccgtctttc agacgattcg aaatttcggc agcagcagcc
    10021 tcccgtccca tgcggtattt ttcggcacgg tcgaaatgcc atgcggtaaa aatcaggact
    10081 atcagcagca atacgcctac cggcttccag tatttcaata aaatatccat ttcagatgac
    10141 ctcaaggatg cagcccgggc agatacacgg ttttgccgtt tttcttggtt gcggtcagta
    10201 tctggttgcg ttgcgggctg ttgcgtcgga aaccgatgtg tacccatgcg ccgtccccgc
    10261 gctcgggaaa ttcgagtatc aactggtcga atttcagcgc a
//
LOCUS       DBBZXW010000066        10188 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.066, whole genome shotgun sequence.
ACCESSION   DBBZXW010000066 DBBZXW010000000
VERSION     DBBZXW010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10188
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.066"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(281..1498)
                     /locus_tag="ACJJD2_001474"
     CDS             complement(281..1498)
                     /locus_tag="ACJJD2_001474"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HGG7579984.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLTAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1700..2428)
                     /gene="rph"
                     /locus_tag="ACJJD2_001475"
     CDS             complement(1700..2428)
                     /gene="rph"
                     /locus_tag="ACJJD2_001475"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HGG7579985.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2510..2974)
                     /locus_tag="ACJJD2_001476"
     CDS             complement(2510..2974)
                     /locus_tag="ACJJD2_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HGG7579986.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3191..3967
                     /locus_tag="ACJJD2_001477"
     CDS             3191..3967
                     /locus_tag="ACJJD2_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG7579987.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4212..5066
                     /locus_tag="ACJJD2_001478"
     CDS             4212..5066
                     /locus_tag="ACJJD2_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HGG7579988.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5107..6315
                     /gene="pncB"
                     /locus_tag="ACJJD2_001479"
     CDS             5107..6315
                     /gene="pncB"
                     /locus_tag="ACJJD2_001479"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HGG7579989.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIREDLEAELDALCQLRFTHDELDYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6407..8125
                     /gene="argS"
                     /locus_tag="ACJJD2_001480"
     CDS             6407..8125
                     /gene="argS"
                     /locus_tag="ACJJD2_001480"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HGG7579990.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLAFMGNTVVRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERAAALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATAPTVLSEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAESASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            8671..10089
                     /locus_tag="ACJJD2_001481"
     CDS             8671..10089
                     /locus_tag="ACJJD2_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HGG7579991.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAMFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAACAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2335 a         3001 c         2579 g         2273 t
ORIGIN      
        1 gatgtatagt ggattaacaa aaaccagtac ggcgttgcct cgccttagct caaagagaac
       61 gattgtctaa ggtgctgaag caccgagtga atcggttccg tactatttgt actgtctgcg
      121 gcttcgtcgc cttgtcctga tttttgttaa tccactataa atttaatcca ctatattttt
      181 tgttccaaag tcaaaatatg ccgtccgaac attcgggcgg cagacaaaac ggcactgccc
      241 gataaaggca gtgccgttgt ccgtttcaaa ccgtgaaaca tcagcccaaa ttaaaggctt
      301 tatgcaatac cctggttgcc agttccatgt atttttcatc aatcaatacg gaaactttga
      361 tttcggaggt ggaaatcatt tggatgttga taccctcttc ggcgagcgtg cggaagattt
      421 tggcggctac accgacgtgc gaacgcatac ccaaaccgac tgcggagact ttgcatacgg
      481 tgtcgtcgcc atcaatagaa gccgcgccga tactgtcttg gcgttccgac aggatttcca
      541 aagtctgctt gtaatcgccg cgcggtacgg taaaggaaaa atcggttgtg ccttcgctgc
      601 cgacattttg gataatcata tcgacttcaa tgttggcatc ggcaaccgcg cccaaaatct
      661 gataggcaac gccgggtttg tcgggtacgc cgcgcacgtt gatgcgggct tggtttttat
      721 cgaatgcgat accggttacg gcagctcttt ccatgttgtc gtcctcttca aaggtaatta
      781 aggtgccatt gccgccgtct tgcaggctgc tcagtacgcg caggcgcact ttgtactttc
      841 cggcgaattc tactgaacgg atttgcaaga ctttcgagcc gaggcttgcc aattcgatca
      901 tttcttcaaa tgtaaccgta tccatgcggc gcgcttcggg tacgacgcgc ggatcggtgg
      961 tgtacacgcc gtccacgtcg gtatagattt ggcattcgtc cgctttgagg gctgcggcaa
     1021 gcgcaacggc ggaagtgtcg gaaccgccgc gtccgagcgt ggaaatatcg ccttcactgc
     1081 tgatgccttg gaagccggca acgatgacga ctttgccggc ggtaaggtcg gcacgcattt
     1141 tttcgtcatc aatgctttcg atgcgggctt tggtgtgggc ggtatcggtt ttgagggcga
     1201 cctgccagcc tgtgtagctt ttggcatcca cgccgatgtc tttcaatgcc atcgccaaaa
     1261 ggccgatggt tacttgttcg ccggtggaca aaaccacgtc caattcgcgc ggatcgggat
     1321 gctcctgcat ttcgtgcgcc aacgcgacca ggcggttggt ttcaccgctc atggcggata
     1381 cgacgacgac gatgtcgtgt ccttcggcgc gggctttggc gacacgtttg gccacgtttt
     1441 taatgcgttc gggcgagcct acggatgtgc cgccgtattt gtgtacgatt aacgccatgt
     1501 ttcgtgcttt cttgtgtggg attggtcggg cagcatggtt tgctggaaaa gcggctatta
     1561 ttactatttt ttacatgaag ttcaagaacg gactgcgctt tcccgcctgc cgtttgacag
     1621 cggtcagcga aaaacctgtt ctttcagatt gttgacaaaa tgccgtctga acggttttca
     1681 gacggcatcc ggacgacaat caggcggcgg acaacgcatt ttgctggtgt tgcagcagtt
     1741 cgcctatgcc tttttgcgcc agtgcaacca gtttgcccaa ttcgtccaaa ctgaacggcg
     1801 cgtcttccgc cgtaccttgg atttcgatga tttttcccga tgcggtcatg acgatattca
     1861 catcactgtc gcaaccggag tcttcgggat aatccaaatc caaaagcggc acgccgttca
     1921 ctacgcctac tgacacagcg gcaacggctt cgcggatggg gttttcactc aaaatgccgt
     1981 ctgaaaccag tttgccgacg gcgatttgca gcgcgacaaa cgcaccggta atcgaagccg
     2041 tacgcgtacc gccgtctgcc tgaatcacgt cgcagtcaat caagatttgg cgttcgccga
     2101 gtttttccat atccacgacc gcgcgcagcg aacgcccgat aaggcgttgg atttcttgtg
     2161 tgcgcccgga ctgtttgccc gccgaagctt cgcggcgcat ccgggaagca gttgaggcag
     2221 gcagcatccc gtattccgcc gttacccagc cttggttttt accgcgcaga aacggcggga
     2281 cgttttcatc tatggaagcg gtacaaatca ctttggtatt gccgcattca ataaggcacg
     2341 aaccgtccgt atgcggcagg aaatgagggg tgattttgat atcgcgcagg ctgtcggcgg
     2401 cgcgcgagat gcggatgtaa tcaggcatac tgccctcccg ttaaaaacag ataaattaaa
     2461 aagccttaaa tatgaaaaat cacatttaag gccttcaaac tgaaaatttc tacgcctctt
     2521 cggctttgct gcggataatc aaaagcggca ggtggctttg gcgcattacc gtttcggcaa
     2581 aactacccat taaaaggtgc atcagtccgg tacgtccgtg cgtacccaac accagcaggt
     2641 cggcaccgtt ttcatcggca taatcaacca aatcctgcgc catttcacgc gcacccttat
     2701 tggcaaccag caggtgtttg acggtatttt ccacacccag ttcccgggcg gtgcgctcgg
     2761 cggcatccaa aacttcgttg ccttgcgcga cggcggcggc ttcgtagctt tcgtgttgca
     2821 aaaattcggg ggcgagcgcc atatattcgg caggattggc aacgtgtacc aaagtcagac
     2881 gcgcaccgtt gaccccggca agctcggcgg catgtttcag ggcattgatg gacgtttcac
     2941 tgccgtcaac ggcaacaacc aaatgtttgt acatatcgta ttctcctttt gcaccgcctc
     3001 gcggtgccct cttgtcggat gggcgcaggg acagtttgcg ctgtttcatt atagacccgc
     3061 cgtcgggctt tatacaacag ccgaacagcc cgaccgcttt ccagtataat atgccgcttc
     3121 cgtgcagtca ggcatttttt gccggctttc gttcactttt tgatttgacg caatcttgca
     3181 ggattcgacc atgtccgaca acgctttgac ctcttcgcga cgcttcggcg gcatcgccag
     3241 actctacgga gactctgcct tggcgcactt ttcacaggca cacgtctgcg tagtcggcgt
     3301 gggcggtgtc ggctcgtggg cggtcgaggc tttggcgcgg acgggcatcg gacgtttgac
     3361 tttgattgat ttggacaacg ttgccgaatc gaatgtcaac cgccagctgc acgccctgac
     3421 cggagacttc ggcaaagcaa aagttaccgc cttgcgcgaa cgcgtcgccc aaatcaaccc
     3481 agaatgccaa gtgtttgaaa ttgaagattt cgttaccgaa gacaatttgc cggaatactt
     3541 cggaaaaggt tttgatttcg tcatcgacgc gatcgaccaa gtgcgcgtca aagcagcaat
     3601 ggcggcttat tttgtggaac gcaaacaacc gtttgtcctc agcggcggcg cgggcggaca
     3661 aaaaaatccg gcgttaatcc aaaccgccga tttgagccgc gtaacccacg acccgctgct
     3721 tgccaacctg cgctacacct tgcggaaacg ctacggattc agccgcgata cgaaagcaaa
     3781 tatgcgcgtg ccttgcgtgt attcgaccga aaatatcgtg ccgccgcagt ctagggaggc
     3841 ttgttcggca gatgccgctc cgcaaggctt gtcgtgcgcc ggctacggtg caagcatgct
     3901 cgttaccgct tcgttcgggc tatattgcgc acaggcggcg gtggaacaca tcgcagacaa
     3961 aaaataagca atgccgtctg aaacaggatt cagacggcat ttgaacaaac gcggcaatca
     4021 agctgtcggt tcagaaaaac caacatcggc acgcctaaaa ccgtattcac aacctgctcc
     4081 ttttcaaaac atttgcattt aaaagccgtt ataatgccgt ctgaacattt gcccgaccac
     4141 attatacgtg aatgtcggca gattgttttc ttttgtaaac ttatattaaa atccacttac
     4201 cgattcacgc catgccgccc atccctgccc catccgcacc atccgagcac actgtcgcat
     4261 gggtattcgg ccaacccgtt accgatttgc cgcaggattt gtttatccca cccgacgcgc
     4321 tgaaagtcgt attgggcagt tttcaaggcc ctttggatct actgctgtat ctgatccgca
     4381 agcagaacat cgatgttctc gatattccga tggtgaagat taccgagcag tatctgcact
     4441 acatcgccca aatagaagcc tatcagtttg atttggcggc ggaatacctg cttatggcgg
     4501 ccatgctgat tgaaatcaaa tcgcgcctgc tgctgccgcg taccgaaacc gtcgaagacg
     4561 aagaagccga cccgcgtgcc gagttggtgc gccgcctgct ggcttacgaa cagatgaagc
     4621 tggcggcgca gggtttggac gcgctgcccc gagccggacg ggatttcgcg tgggcttacc
     4681 tgccgctgga aattgccgtc gaagccaagc tgcccgaagt ctatattacc gacttgacgc
     4741 aagcgtggct gggtattttg tctcgggcaa aacacacgcg cagccacgaa gtaatcaaag
     4801 aaaccatctc cgtgcgcgcg caaatgacgg caatcctgcg ccgtttgaac ggacacggga
     4861 tatgcaggtt tcacgacctg ttcaatcccg aacagggcgc ggcttacgtg gtcgtcaact
     4921 tcatcgcact gttggagctt gccaaagaag gtttggtcgg aatcgtacag gaagtcggtt
     4981 tcggagaaat ccgaatcagc ctcaatcatg agggggcaca ttcagacggc atttccggca
     5041 cacggggcgg gcgcgatgtg ttctaatacg ccccaagccg ccaccaaaaa tcgggagaca
     5101 cgccatatga ccggcatcat acattcgctg cttgacaccg acctctacaa attcactatg
     5161 ctgcaagtgg ttctgcacca gtttccgcag acgcacagcc tttacgaatt ccgctgccgc
     5221 aacgcctcga ccgtctatcc gcttgccgac atcagggaag acttggaagc cgaactcgac
     5281 gcgctctgcc aactacgctt cacccacgac gaactcgact acctccgtag cctgcgtttc
     5341 attaaaagcg actttgtcga ttatctcgaa ctcttccagc tccaacgccg ctttgtcgaa
     5401 atcggcacag acgataaaga ccgtctgaac atccgcatcg aaggtccgat gatacaggcg
     5461 atgttttttg aaatcttcat cctcgccatt gtcaacgaac tttacttccg ccgcctggaa
     5521 acccctgcag tcatagaaga aggcgaacgc cggcttcaag ccaaagccgc gcgcctcaaa
     5581 gaaatcgccg ccgcacaaaa ccccgacgaa ccgcccttcc tgatttccga cttcggcacg
     5641 cgccgccgct acaagctcgc gtggcaggaa cacgtcatcc gcaccctgct cgaagccgcc
     5701 ccaagcatcg tgcgcggcac cagcaatgtc tttctcgcca aaaaactcgg catcaccccc
     5761 atcggcacca tggcgcacga gttcctccaa gccttccagg ccctcgacgt acgcctgcgg
     5821 aatttccaaa aggccgcgct cgaaagctgg gtgcacgaat accggggcga tttgggcgtt
     5881 gccctgaccg acgtggtcgg tatggatgcc ttcctgcgcg atttcgacct ctatttcgcc
     5941 aaacttttcg acgggctgcg ccacgacagc ggcgaccctt acgtttgggg cgacaaagcc
     6001 tacgcccact atcaaaagct caaaatcgac agccgcacca aaatgctgac cttctccgac
     6061 gggctggaca tcgaacgctc ttgggcatta caccaatatt tcaaagaccg cttcaaaacc
     6121 ggcttcggca tcggcaccaa cctgaccaac gatatggggc atacgccttt gaatatcgtc
     6181 ttgaaactgg tcgaatgcaa cgggcagtcc gtcgccaagc tgtccgactc tccgggcaaa
     6241 accatgacca acaacagcac cttcctcgcc tacctgcgcc aagtgttcga cgtacccgaa
     6301 cccgaaacgc cgtaaaccgg cagaaaaagc gcacaattcc tgtttctgcc gcataaaatc
     6361 ttttaaaata ccgcctgatt tgaatttaac cgaaagaccg aacttcatga acctacatca
     6421 aaccgtcgaa cacgaagccg ccgccgcctt tgccgccgca ggcatcgccg gcagccccgt
     6481 tgttttgcag ccgaccaaaa atgccgaaca cggcgatttc caaatcaacg gcgtgatggg
     6541 tgcggcgaaa aaagccaaac aaaacccgcg cgaactggcg caaaaggtcg ccgacgcatt
     6601 ggcaggcaac gccgtcatcg aaagcgcgga agtcgccggt cccggtttta tcaacctgcg
     6661 cctgcgcccc gaatttctcg cgcaaaacat tcagacggcc ttgaacgacg cgcgtttcgg
     6721 catagcgaaa accgacaaac cgcaaaccgt cgtcatcgac tattcctcgc ccaatctggc
     6781 gaaggaaatg catgtcggtc acctgcgttc cagcatcatc ggcgacagca tttcgcgcgt
     6841 gttggcattt atgggcaaca ccgtcgtccg tcaaaaccac gtcggcgact ggggtacgca
     6901 gttcggcatg ttggtcgctt atttggtcga gcagcaaaaa gacaatgccg cgtttgagct
     6961 ggcggatttg gagcagtttt accgcgccgc caaagtgcgc tttgacgaag atcctgcctt
     7021 cgccgacacc gcgcgcgaat acgttgtgaa gctgcaaggc ggcgatgaaa ccgttttggc
     7081 attgtggaaa cagtttgtcg atatttcgct ctcgcacgcc caagccgttt acgacacgct
     7141 gggcttgaag ctgcgccccg aagacgtggc gggcgaatcg aagtacaacg acgatttgca
     7201 gccagtggtc gatgatttgg ttcaaaaagg tctggcggtc gaagacgacg gcgcgaaagt
     7261 cgtattcttg gacgagttca aaaacaaaga aggcgaaccc gccgcgttta tcgtgcaaaa
     7321 acaaggcggc ggcttccttt atgcttccac cgacttggcg tgtttgcgct accgtgtcgg
     7381 cacgcttcat gccgaccgcc tgctgtacgt cgtcgaccac cgccaagccc tgcactttga
     7441 gcaactcttt accacttccc gcaaagcagg ctatctgccg gaaaacgtcg gcgcggcatt
     7501 tgtcggcttc ggcacgatga tgggcaaaga cggcaaaccg ttcaaaacac gcagcggcga
     7561 cactgtaaaa ctggtcgatc tgctgaccga agccgtcgaa cgcgccgccg ctttggtgaa
     7621 agagaaaaat cccgaattgg gcgcggacga agccgccaaa atcggcaaaa ccgtcggcat
     7681 cggcgcggtc aaatacgccg acttgagcaa aaaccgcacc agcaattatg tgttcgactg
     7741 ggacgctatg ctttcgtttg aaggcaacac cgccccctac ctgcaatatg cctacacccg
     7801 cgtgcaaagc gtgttccgca aagccggtga atgggacgca accgcaccga ctgttttgag
     7861 cgaaccgctg gaaaaacagc ttgccgccga gctgctgaaa ttcgaagacg tgctgcaaag
     7921 cgtggcggac acggcgtatc cgcactacct cgccgcctac ctctatcaaa ttgcgaccct
     7981 gttcagccgc ttctacgaag cctgtccgat actcaaagcc gaaagcgcaa gccgcaacag
     8041 ccgcctgcaa ctggcgaagc tgaccggcga cacgctgaaa caaggcttgg atttgctggg
     8101 catcgatgtg ttggacgtaa tgtaaaaccg caccgcccga ttgcggacaa cagcctcgcc
     8161 atccttatcc gaatctgaaa aaagcggcgc gatacaccgt atccgccgcc cctcccaaaa
     8221 tgcgaaacaa acaaacgcca agcaagcaag caagcaagca agcaagcaag caagcaagca
     8281 aaaaattata acccccttcc tgccgacgca cgcactttcc gcgcggcgca ttcccctttt
     8341 cccgcccctc aaatccgcct tttcttcagg cagggtttca gcccgcctct tttccctgtt
     8401 ttcctttccc cgacacgcgt gcgcgccccc tgccgcactg tgctgcactt tcgcgcccgg
     8461 acggcatcgt tccgccatcc ggttctctgt tttaaatacc cctgtttcag aaagaaatgc
     8521 agatgtttca acacacagga cgacacataa agcaccgccc tatgtgttgc cctgatttgg
     8581 aaggggttac gcctcccaaa taaagtctga tcctgccgcc ccgaaggaca gatgtccgag
     8641 tggcgaagtt tcaaccgaaa aggaaatacg atgaatattc acaccctgct ctccaaacaa
     8701 tggacgctgc cgccattcct gccgaaacgg ctgctgctgt ccctgctgat actgctggcc
     8761 cccaatgcaa tgttttgggt tttggcactg ctgaccgcca ccgcccgccc gattgtcaat
     8821 ttggactatc ttcccgccgc gctgctgatc gccctgcctt ggcgtttcgt caaaattgcc
     8881 ggcgtattgg cgttttggct ggcggttttg tttgacgggc tgatgatggt gatccagctc
     8941 ttccctttta tggacctcat cggcgccatc aacctcgtcc ccttcatcct gaccgccccc
     9001 gccccttatc agataatgac cgggctgttg ctgctgtata tgctggcgat gccgtttgtg
     9061 ttgcagaaag ccgccgccaa aaccgacttc cgacacattg ccgcctgtgc cgccgttgtg
     9121 gcggcagccg gctatttcac tggccatttg agttactacg accgggggcg gatggccaat
     9181 atcttcggcg caaacaactt ctactacgcc aaaagtcagg cgatgctcta caccgtcagc
     9241 cagaatgccg actttattac cgccggcctg gtcgatcccg tcttcctccc cttgggcaat
     9301 caacagcgtg ccgccacgca tctgaacgag ccgaaatctc aaaaaatcct ctttatcgtc
     9361 gccgaatctt gggggctgcc ggccaatccc gaacttcaaa acgccacttt tgccaaactg
     9421 ctggcgcaaa aagaccgttt ttcggtttgg gaaagcggca gttttccctt tatcggcgcg
     9481 acggtcgaag gcgaaatgcg cgaactgtgt gcctacggcg gtttgcgcgg gttcgcactg
     9541 cgccgcgcgc ccgacgaaaa atttgcccgc tgcctcccca accgtttgaa acaagaaggt
     9601 tacgccacct ttgcgatgca cggcgcgggc agttcgcttt acgaccgctt cagctggtat
     9661 ccgagggcgg gctttcaaga aatcaaaacc gccgaaaacc tgatcggtaa aaaaacctgc
     9721 gccattttcg gcggcgtgtg cgacagcgag ctgttcggcg aagtgtcggc atttttcaaa
     9781 aaacacgaca agggactgtt ttactggatg acgctgacca gccacgccga ctatcccgaa
     9841 tccgacattt tcaaccacag gctcaaatgc accgaatacg gcctgcccgc cgaaaccgac
     9901 ctctgccgca atttcagcct gcacacccaa ttcttcgacc aactggcgga tttgatccaa
     9961 cgccccgaaa tgaaaggcac ggaagtcatc atcgtcggcg accatccgcc gcccgtcggc
    10021 aacctcaatg aaaccttccg ctacctcaaa caggggcacg tcgcctggct gcacttcaaa
    10081 atcaaataac aacaatgccg tctgaacgca ccaacagcct tcagacggca ttttgcagac
    10141 agaccgaccc ttcaagccca cttttttcat catctccgat aaattgct
//
LOCUS       DBBZXW010000067         9986 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.067, whole genome shotgun sequence.
ACCESSION   DBBZXW010000067 DBBZXW010000000
VERSION     DBBZXW010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9986
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.067"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(177..1619)
                     /gene="aldA"
                     /locus_tag="ACJJD2_001482"
     CDS             complement(177..1619)
                     /gene="aldA"
                     /locus_tag="ACJJD2_001482"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HGG7579992.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEEAIAREPKGGRADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1654..1854)
                     /locus_tag="ACJJD2_001483"
     CDS             complement(1654..1854)
                     /locus_tag="ACJJD2_001483"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579993.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTGANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTVIYLGIN"
     gene            complement(1863..2252)
                     /locus_tag="ACJJD2_001484"
     CDS             complement(1863..2252)
                     /locus_tag="ACJJD2_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579994.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTVDRISVSFIREIQAA"
     gene            complement(2253..2429)
                     /locus_tag="ACJJD2_001485"
     CDS             complement(2253..2429)
                     /locus_tag="ACJJD2_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7579995.1"
                     /translation="MSGYVQFLGTDSKGQSKFIFVGTNENGSITTIHTKSGKDFWRTL
                     NNNPKNKTIYPKAR"
     gene            complement(2460..3377)
                     /locus_tag="ACJJD2_001486"
     CDS             complement(2460..3377)
                     /locus_tag="ACJJD2_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7579996.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRRRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWNLSPNLRGSAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFNRTLNAAFADGA
                     HQVNRLTDALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3549..4349
                     /locus_tag="ACJJD2_001487"
     CDS             3549..4349
                     /locus_tag="ACJJD2_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7579997.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4398..5174
                     /gene="mlaE"
                     /locus_tag="ACJJD2_001488"
     CDS             4398..5174
                     /gene="mlaE"
                     /locus_tag="ACJJD2_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HGG7579998.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5225..5719
                     /gene="mlaD"
                     /locus_tag="ACJJD2_001489"
     CDS             5225..5719
                     /gene="mlaD"
                     /locus_tag="ACJJD2_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HGG7579999.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5756..6346
                     /locus_tag="ACJJD2_001490"
     CDS             5756..6346
                     /locus_tag="ACJJD2_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HGG7580000.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            6403..6681
                     /locus_tag="ACJJD2_001491"
     CDS             6403..6681
                     /locus_tag="ACJJD2_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HGG7580001.1"
                     /translation="MHTELNNGTLHISGDVTVKTLTAAAFTRFRQQCRLKDTRAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6678..7505
                     /locus_tag="ACJJD2_001492"
     CDS             6678..7505
                     /locus_tag="ACJJD2_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HGG7580002.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7630..7992
                     /locus_tag="ACJJD2_001493"
     CDS             7630..7992
                     /locus_tag="ACJJD2_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HGG7580003.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7992..8375
                     /locus_tag="ACJJD2_001494"
     CDS             7992..8375
                     /locus_tag="ACJJD2_001494"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG7580004.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            8372..8860
                     /locus_tag="ACJJD2_001495"
     CDS             8372..8860
                     /locus_tag="ACJJD2_001495"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HGG7580005.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8941..9069)
                     /locus_tag="ACJJD2_001496"
     CDS             complement(8941..9069)
                     /locus_tag="ACJJD2_001496"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HGG7580006.1"
                     /translation="MAGVTVGRGSVVGAGAVVTKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(9075..9455)
                     /locus_tag="ACJJD2_001497"
     CDS             complement(9075..9455)
                     /locus_tag="ACJJD2_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HGG7580007.1"
                     /translation="MGSKFFFLLLRFAGSVLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGPVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGAG"
     gene            9465..9591
                     /locus_tag="ACJJD2_001498"
                     /pseudo
     CDS             9465..9591
                     /locus_tag="ACJJD2_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9693..9908
                     /gene="rpmE"
                     /locus_tag="ACJJD2_001499"
     CDS             9693..9908
                     /gene="rpmE"
                     /locus_tag="ACJJD2_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HGG7580008.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT         2336 a         2775 c         2490 g         2385 t
ORIGIN      
        1 agtgaatcgg ttccgtacta tctgtactgt ctgcggcttc gtttaaattt aatccgctat
       61 acaaagacaa aaacatcgac ctcggtcatg actgattgcc ggtgaaactg taaaaatgcc
      121 gtctgaacct gaaaacgggt tcagacggca ttttctatcg gggttttaaa gcggcattaa
      181 atgtcggttt ccagataaac gacttgggtt tgcagatatt cttccaaacc gtgtttgccg
      241 tccgcgccgc cgatgccgga ttttttccag cccgcgtgga agccttgcat ggcttcaaag
      301 ttttcgcggt tgatgtaggt ttcgccgaat tgcaggcggc gggtaacgta gaaggcttcg
      361 tttaaattag tcgtataaac agaactggtc agaccaaact cgcaatcgtt agccagtgcg
      421 atgacttggt caagcgtgtc gaaagcggaa acgggcagca cggggccgaa ggtttcttct
      481 ttcataatgt ccatactgtt gtcggtgtcg gtcagcaggg tcggctcgaa gaaataaccg
      541 cgtccttcgg cgcgtttgcc gccgcagacc agtttcgcac cttgtttgac tgcccgttcc
      601 actttttcgg caacggcttt gacggcgcgc tcttcaatca gcggacccat ttccagcgcg
      661 cctgcttcgg cttcggcagg gttgccgtag cgcacgcctt tcatggcggc agtcattttt
      721 tcaatgaatg cgtctttcag actgctgtgg acataaacgc gctcggcgca gttgcagatt
      781 tgaccggtgt tgccgacacg cgaagccaag atggatttca ccgccaaatc caaatccgcg
      841 tctttcaaaa cgatggcggg ggctttgccg ccgagttcca acgaaacttt ggtgatgttg
      901 gcggaagcgg cttccatcac ttggcggccc gcttcgacgg agccggtcag gctgaccata
      961 tcgacttgcg gatgggcgga caaggcattg ccgatttccg cacccggacc gttcaccacg
     1021 ttgaacacgc ctgcgggcaa tccgaccgca tcgacgattt cggcgaagat gtggcagttg
     1081 atcggggtta cgctgctggg tttgacaacg atggtgttgc ccgttactaa ggcgggaccc
     1141 attttgcggg caatcaggaa gaaagggaag ttccacggca aaatgccggc aattacgccc
     1201 agcggacgtt tgaacaataa aatgttttcg cgcgggcggt cgctttggat gatttcgcct
     1261 tcgtaacggc gcgcccattc ggcttggtaa tcgagatagt cggcggtgaa catcacttcc
     1321 acgcgcgcca agtctttggt tttgccgcct tcggcaacga tggtgtcggt cagctcgtcg
     1381 gcgcgttcgc gtatgccttg ggcgattttg cgcaaatacg cgccgcgttc gaccgcaggc
     1441 agacgctccc aagccggttg cgccgcacgc gccgccgcta cggcgcggtc aacgtccgcc
     1501 ctgccgcctt tgggttcgcg ggcgatggcc tcttcggtgg acgggttcaa tacgtcgcgc
     1561 cattcgccgt tgaaatcgtt ttcaaagcgt ccgttgatgt acatggccaa ttgtttcatt
     1621 tcgggttctc cagttttgta gtcagatgta gttttagttt attcccaaat aaattaccgt
     1681 acaagtttct tttgaaatgt ttagacgaga agctactatg tctgcatatt gttctgctaa
     1741 tttatattca ctcgaatgca actgccgatt attccaatct gcattcgcac cagtaaaagc
     1801 cccagcattg ccgcctgtgg cataaccaat cgctaaactg ccaacggtat ccacaacagg
     1861 tttcaggctg cctgaatttc tctaataaat gaaacactta ttctatcaac cgttaatgta
     1921 accaaacaat tatcaagata agagtagttt attaaatact catcttcttc aaattgtata
     1981 ttttgtaggg ttagatgatt attttttaat tctgccgtta tttcatactt gaaactatca
     2041 tctatttttc taaatccaat atttgaagtt gatttatcca gtatgtaatc attaaagatt
     2101 tcataggata attccacttc ataaaattga ttttcaaata ttttgaatgg gcagtacgat
     2161 ataaaacaat gtagttcata accatttatt tcaatcaata ctgcctcttc aatggtgtta
     2221 tctaactttt tgattttaca tttatataac atttatcttg cctttggata aattgttttg
     2281 ttttttggat tgttattcaa agttctccaa aagtcttttc ctgattttgt atgtatcgtg
     2341 gtaatactac cattttcatt ggttccaaca aaaataaatt tagattgacc tttggaatca
     2401 gtacccaaaa actgaacata tccagacatg cggatttcgg gttttaaatc aaatgcggct
     2461 tatcggtttt cttttttggt ttccgcaggc gtgctgccga aatattgcct gaatgcctga
     2521 gtaaagctgg aaacgtggcg gtagccgcac aaatacgcgg tttcgcctat gcttttgccc
     2581 ccgttttgca acaggtagag cgcgtgctgc atttgtttgt ggtgcagcca ctcgcttgcg
     2641 gtaataccga aatggtcgcg catacggcgt tgcagcgtcc tttcactgat gttcagcgcg
     2701 tctgtcagcc ggttgacttg gtgtgcgccg tcggcaaacg cggcatttag ggtgcggttg
     2761 aagtcttcag acggcatagc gtctgcttcc gccgtttgcc ccgccgccgg cccgatgccg
     2821 tctgaaaccg tgtcccacaa gtccgacagc agccgcaaaa cgtccgcctc gcggcgcaat
     2881 gtttcgccca aatgcccctt tgggacagct ttcaggcagg atgccgccga gccgcgcagg
     2941 tttggggaca aattccatat tctgaccggt tcgcggtaaa gcaggggtgc gaaacgcgca
     3001 tactccggac gcagcagcca ttgttccata cctttaatgg tcattttgac cgttttgccg
     3061 cctcggtaaa gatagcggct gaacaggacc tcttccccga cagcaattag gacgatcttg
     3121 ccgccatccg catcgatttg gaagcggcgg cggttgatgc cgaagtccaa actgccttcc
     3181 agcaagagca cgaacgacac ataaggttcg gcgaggcggc tgctgcaaaa atcgcaccgt
     3241 gccgttaccg tgccgccgtg gatggaaatg ccgttggaca aagtatcgaa acggtagctg
     3301 ccctccacat agctgccgcc gccgcttttg accagattga cgaaccggct gctgttcaaa
     3361 tgttctgctt tttccatagt tttctgataa aggttatcat ttgaaagata acatttttcg
     3421 ccacagcaaa caatccgccg ccacaacggc attttcacaa catttaccgt ccgtatgccg
     3481 tctgaaaatt gcccgtcttc ccgataagcc ttaaaataca cgccgtcaaa cctaccgtcc
     3541 gtccgtacat gagcccatcc ccctttatcg aaatgaaaga cgtcgccttc gcgtatggcg
     3601 accgcccgat tctgaagaac atcaatttca gcattccgca aggcaatttt gctgccgtaa
     3661 tgggcggttc gggcagcggc aaaaccacgc tgatgcgact gattacagga cagattcgtc
     3721 cgcagtccgg gcaggttttg attgaaggac gggatttggc gggcttttcg gctgacgagt
     3781 tgtatgaaca ccgccgccgt atgggcgtat tgttccaaca cggcgcgctg tttaccgatt
     3841 tgtctgtatt tgacaatatt gcttttccga tgcgcgaact gacgcgcctg ccggaagcgg
     3901 tgattcgaga tttggttttg ttgaaactga acgcggtcgg gctgcgcggc gtggaaaacc
     3961 tgatgccgtc cgagttgtcc ggcgggatgt cgcgccgcgt cgcgcttgcc cgcacaatcg
     4021 cgctcgatcc cgaaattatg ttgtacgacg agccgtttac cggtctcgat ccgatttcct
     4081 tgggcgtgat tgcccacttg atcagccgcg tcaacaaggc tttgcgttcg accagtatta
     4141 tggtcacgca cgacattgaa aaatctttgg aaatcgtcga tcaggtgatt ttcttggcgc
     4201 acggcgaaat tatgttctcc ggctcgccgc aggaaatgcg cgaactggat tcgccttggg
     4261 tgcgccagtt tgtcggcggg ctggcagacg gccccgtggc ataccgttat ccggcgcaaa
     4321 cgtcgttgca gcaggatttg ctcgggtaaa ttgagccggt gccgtctgaa accgttgaac
     4381 tttacatata gaaatttatg aattttatcc gttccgtcgg ggcgaaaacc ctcggcctta
     4441 ttcaatccct cggcagtatt acgctgtttc tgctgaacat tctggcgaag tccggtacgg
     4501 ctttcgtccg tccgcgcctg agcgtgcgcc aagtgtattt tgccggcgtg ctgtcggtgc
     4561 tgattgttgc cgtttcgggg ctgttcgtcg gcatggtctt gggtttgcag ggctatacgc
     4621 agttgtcgaa attcaaatcc gccgatattt tgggctatat ggttgcggct tcgctgttgc
     4681 gcgaactggg tccggtgttg gcggcgattc tgtttgccag cagcgcgggc ggtgcgatga
     4741 ccagcgaaat cggtttgatg aaaacgaccg aacagctcga agcgatgaac gtgatggcgg
     4801 taaaccccgt cgcccgagtg gttgcgccgc gcttttgggc gggcgtgttt tccatgccgc
     4861 ttttggcttc gattttcaac gtggcgggta ttttcggcgc gtatttggtc ggtgtaacct
     4921 ggctgggctt ggacagcggt attttctggt cgcaaatgca gaacaatatc acgatacatt
     4981 acgatgtaat caacggtctg attaaatccg ccgcgttcgg cgtggcggta acgctgattg
     5041 ccgtgcatca gggcttccat tgcgtcccga cttcggaagg cattttgcgc gccagcacgc
     5101 gcacggtggt ttcgtccgcc ctgacgattt tggcggtcga ttttatattg accgcgtgga
     5161 tgtttacaga ttgacaggcc gtctgaagac gaaacgcgga acatcggata ttcaaggaac
     5221 tttaatgaaa aagaacatat tggaattttg ggtcggactg ttcgtcctga ttggcgcggc
     5281 ggcggttgcc tttctcgctt tccgcgtggc cggcggtgcg gcgttcggcg gttcggacaa
     5341 aacctacgcc gtttatgccg atttcggcga catcggcggt ttgaaggtca atgcccccgt
     5401 caaatccgca ggcgtattgg tcgggcgcgt cggcgctatc ggacttgacc cgaaatccta
     5461 tcaggcgagg gtgcgcctcg atttggacgg caagtatcag ttcagcagcg acgtttccgc
     5521 gcaaatcctg acttcgggac ttttgggcga gcagtacatc gggctgcagc agggcggcga
     5581 cacggaaaac cttgctgccg gcgacaccat ctccgtaacc agttctgcaa tggttctgga
     5641 aaaccttatc ggcaaattca tgacgagttt tgccgagaaa aatgccgacg gcggcaatgc
     5701 ggaaaaagcc gccgaataaa cgtatgccat catattcaaa ctaggacact taatcatgaa
     5761 aaaatcctcc ctcatcagcg cattgggcat cggtattttg agcatcggca tggcatttgc
     5821 cgctcctgcc gacgcggtaa accaaatccg tcaaaacgcc actcaagtat tgagcatctt
     5881 aaaaagcggt gatgccaaca ccgcccgcca aaaagccgaa gcctatgcga ttccctattt
     5941 cgatttccaa cgtatgaccg cattggcggt cggcaaccct tggcgcaccg cgtccgacgc
     6001 gcaaaaacaa gcgttggcca aagaatttca aaccctgctg atccgcacct attccggcac
     6061 gatgctgaaa ttaaaaaacg ccaacgtcaa cgtcaaagac aatcccatcg tcaataaagg
     6121 cggcaaagaa atcatcgtcc gcgccgaagt cggcgtaccc gggcaaaaac ccgtcaacat
     6181 ggacttcacc acctaccaaa gcggtggtaa ataccgtacc tacaacgtcg ccatcgaagg
     6241 cgcgagcctg gttaccgtgt accgcaacca attcggcgaa atcatcaaag cgaaaggcgt
     6301 ggacggactg attgccgagt tgaaggctaa aaacggcagc aagtaatcca taagccatgc
     6361 cgccagactg aagatggcat ggattttttc ctaccgaaca ctatgcatac agaactcaac
     6421 aacggaacac tgcacatcag cggcgacgta accgtcaaaa ccctgaccgc cgccgccttt
     6481 acccgcttca gacagcaatg tcgtctgaaa gacacccgcg cggttgattt gagcggcgtc
     6541 ggacgcgccg attccgcctg cgtgtcgctg ctgctcgaag tgctgcgcgg ttgcaaaggc
     6601 agcgtcaggc tgaccggcat tcccgaatcc gtgcgcgcgc tgtccgaact gtacgaaatc
     6661 aaagactggc tgaaatcatg aaaaaaaccg cctatgcctt cctcctgctg atcgggttcg
     6721 cttccgcccc tgcatttgcc gaaacccgcc ccgccgaccc ttatgaaggc tacaaccgcg
     6781 ccgttttcaa attcaacgac caagccgacc gctacatttt cgcccctgcc gcgcgcggct
     6841 accgcaaagt tgcgccgaaa cccgtccgcg ccggcgtgtc caattttttt aacaacctgt
     6901 gcgacgtggt cagcttcggc agcaatatct tgcgcttgga catcaaacgc gcaagcgaag
     6961 accttgtccg cgtcggcatc aacaccactt tcggtttggg cgggcttatc gacatcgccg
     7021 gcgcgggcgg cattcccgac aataaaaaca ccttgggcga cacgtttgct tcgtggggat
     7081 ggaaaaacag caattatttc gtgttgcccg tcttagggcc gtccaccgtc cgcgacgcgc
     7141 tcggcacggg tattacctcc gtttattcgc ccaagaatat cgtcttccgc acccctgtcg
     7201 gacgctgggg cacgactgcc gtatccgccg tcagtacgcg cgaaggtctg ctcgatttga
     7261 ccgacagtct ggacgaagcc gccatcgaca aatacagcta cacgcgcgac ctctatatga
     7321 aagtccgtgc gcggcagacc ggtgcaacac ctgccgaagg tacggaagat aacatcgaca
     7381 tcgacgaatt ggtcgaaagt gccgaaaccg gcgcggcgga aactgccgtt caagaagatt
     7441 ccgtatccga aacacaggca gaagcagcag gggaagccga aacgcaacct ggaacacaac
     7501 cttaaagcca tgccgtctga aaatccgtgt tcggacggca ttcccttctg tcggaacgga
     7561 cagtccgaaa ccacagattg ggctataatc tcttttttgc gcataccgcg cgacagcaaa
     7621 ggaaaaacca tgtacgaagt caaccgcagc gtattcgtcc tcatcccttt agaacctttt
     7681 tggaactggc tgcaaaccct gccgggcaac cacctcgacg gactgactct tgaagacatc
     7741 caagccgacg ccaattccta ccttgtccgc ccgtgcgaaa ccgccgacga agtatgggac
     7801 gaaatcgaag cccgttttga agacattttc gccgccgaac ttgccgactg gtgcgaagac
     7861 gaacgcgagt ggcctgcgct cgatgccgac attttcaacg aatggttcga catccagctt
     7921 tctaccgtca tcaccgacct cgaacacgaa ccgcttgccc gcgaagcctt ccaacccatc
     7981 aacctgaact gatgaagctg accgtccgca actaccatct cgacggctac ggccatgtca
     8041 acaatgcgcg ctacctcgaa tttttcgaag aagcgcgctg ggcgtttttt gaagaacgcg
     8101 gactgctgca cgagttggca ggcctcatac tgattgtcgc ccgcatcgac atccgataca
     8161 gccgccccgc cgtcgaaggc gacgtattgc agttttcatg ccgcctgaaa acccccggca
     8221 cgcgccgtat tgtgctgacc cagacgatta cactgccaaa cggcaaaacc gccgcagaag
     8281 ccgacatcac cctgatgccc gtccacgccg ccacacaacg caccgtcagc ctgcccgcca
     8341 cccttgcccg cgcattggaa gccttgtccg aatgaaaaaa atactcaccg ccgccgtcgt
     8401 cgcactgatc ggcatcctcc ttgccatcgt cctcatcccc gacagcaaaa ccgcgcccgc
     8461 cttctccctg cccgacctgc acggaaaaac cgtttccaac gccgacctgc aaggcaaagt
     8521 aaccctgatt aatttttggt ttccctcctg tccgggttgt gtgagcgaaa tgcccaaaat
     8581 cattaaaacg gcaaatgact ataaaaacaa aaacttccaa gtccttgccg tcgcccagcc
     8641 catcgatccg atagaaagcg tccgccaata tgtcaaagac tacggtttgc cgtttaccgt
     8701 catgtatgat gcggacaaag ctgtcggaca ggcgttcggc acacaggttt atccgacttc
     8761 cgtccttatc ggcaaaaaag gcgaaatcct caaaacttat gtcggcgaac ccgatttcgg
     8821 caaactctac caagaaatcg ataccgcgct ggcgcaatag cgatgccgtc tgaagcgcaa
     8881 aaaacagaaa cgatgttcct gttttttcag atcatccgcc ccgacacgtt cagacggcat
     8941 tcaaccttcc ggcagattct ttttcaccac tgccggattg cctgccgcca aagagtaggg
     9001 cggaatgtct tttgtaacca ccgcgcctgc gcccacgacc gaaccgcgtc cgacggttac
     9061 gcccgccatt acaatcaccc tgcgccccgg ccagacatcg tcctccaacg taatcggacg
     9121 gatttccgtg tagccctcaa agcgtttttt gaacggtcaa acttgtggtt atttgaataa
     9181 aacagacatt ccggctccat catcacattt ttgccgacca ccggcccacg gcagatttca
     9241 cagtttgccc cgatgcccga gccgtcgccc aaaaccgtat ccggaaacac atacgccccg
     9301 cgttcgatat tgaccccgcg tccgatatgc ggagaaaccc gccgcgccaa aaaaccgcgt
     9361 acccgtctgc cgacgatgcc gatgccgcgc atatgtgacg gcggcaacac cgaaccggca
     9421 aaacgcagca gcaggaaaaa gaattttgat cccatcaaac ctccctcaaa agaacttttt
     9481 atagtggatt aacaaaaatc aggacaaggc gacgaagccg cagacagtac agatagtacg
     9541 gcaaggcgag gcaacgctgt actggttttt gttaatccac tatacatttt atcgaatatc
     9601 ctcttgacga aacaacagaa aatagcgaga atgccgagct tgtctgtagc ataggtacat
     9661 tccctatgcc cgcttttttg aaaggaaatc aaatgaaaca aggtattcac ccgaactacc
     9721 acgaagtcaa cgttacctgc tcttgcggca acaaattcgc aaccaaatcc gcgatggaaa
     9781 aagaaaactt caatatcgag gtttgctccc tgtgccaccc gttctatacc ggcacccaaa
     9841 aaatcgtcga taccaccggc cgcgtggaca aattcaacaa caaattcggc aacctgttca
     9901 aacgctgatt gccgctttgc aagaattaag ccctgccatc atttcgatgg cagggctttt
     9961 taatatttgg cacactgact tcttat
//
LOCUS       DBBZXW010000068         9984 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.068, whole genome shotgun sequence.
ACCESSION   DBBZXW010000068 DBBZXW010000000
VERSION     DBBZXW010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9984
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.068"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(106..300)
                     /locus_tag="ACJJD2_001500"
     CDS             complement(106..300)
                     /locus_tag="ACJJD2_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HGG7580009.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(290..2371)
                     /locus_tag="ACJJD2_001501"
     CDS             complement(290..2371)
                     /locus_tag="ACJJD2_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HGG7580010.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEILAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            2848..3228
                     /locus_tag="ACJJD2_001502"
     CDS             2848..3228
                     /locus_tag="ACJJD2_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HGG7580011.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPPVQNQAGTDDF
                     RAFSCENGLSVRVRHLDSGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3361..3855)
                     /locus_tag="ACJJD2_001503"
     CDS             complement(3361..3855)
                     /locus_tag="ACJJD2_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
                     /protein_id="HGG7580012.1"
                     /translation="MIFKQNQNYWTVFYTNEEALIVQTCSGLGLTAIDHLYPPHILPL
                     DTDNETLGTTVLQALANSRTFVYDSPEDQDFFDTEKIRQRYEDWVAKLCGNLGYKTRR
                     ALFKNMMSVDIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLKLAL
                     SRCR"
     gene            3992..4156
                     /locus_tag="ACJJD2_001504"
     CDS             3992..4156
                     /locus_tag="ACJJD2_001504"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580013.1"
                     /translation="MYKKVFFLNDRDCARAIFRHRPDVALPDRMLQTASEGFAVLEYE
                     DDNVREIDGI"
     gene            4189..5622
                     /locus_tag="ACJJD2_001505"
     CDS             4189..5622
                     /locus_tag="ACJJD2_001505"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HGG7580014.1"
                     /translation="MNEYYQLIKHPDISLSPISDGIGVGNPATGEILAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIIKPASLTPLSAYALASLAYEAGIPQDLLPVVSGRASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDEFCRKLSEKVAELKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALAKGASCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            5731..6519
                     /locus_tag="ACJJD2_001506"
     CDS             5731..6519
                     /locus_tag="ACJJD2_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HGG7580015.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVIEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            6887..8443
                     /locus_tag="ACJJD2_001507"
     CDS             6887..8443
                     /locus_tag="ACJJD2_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HGG7580016.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            8460..9206
                     /gene="surE"
                     /locus_tag="ACJJD2_001508"
     CDS             8460..9206
                     /gene="surE"
                     /locus_tag="ACJJD2_001508"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HGG7580017.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKTPPQFPILWNIN
                     IPAVAPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAVFWHAD"
     gene            9462..>9984
                     /locus_tag="ACJJD2_001509"
     CDS             9462..>9984
                     /locus_tag="ACJJD2_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7580018.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPASDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYIPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPKAAAVK
                     SRPAVPAAAQPPVQ"
BASE COUNT         2330 a         2542 c         2799 g         2313 t
ORIGIN      
        1 cgtactgtct gcggcttcgc cgccttgtcc tgatttttgt taatccacta tattataaaa
       61 attccgtctg aagtggcgtt cagacggaat ttgtttcaag caggcttaac agcagcgtcc
      121 gccgtttgcg ccgcaacggc gcttgcggca gtagtcttga aattgcagct tggtcatcac
      181 gggggcgttg ggattatgtt tgcgctgctg tgcaacgtag ttttcataat caggcacgcc
      241 tgccatcaag tttgccgtca gcttgatggt tttccaccaa gacgcgagct tatgcttcac
      301 tttgtgcctc cggctgcttg ccgtcgcggt acaccgccgg gatttctttg gcggtcggcc
      361 agccgacttt gcgtgctttg agggcggtac gcaaaccgta cgcggcgaca atcacgacaa
      421 ccgacaagaa gaggatggtc agaccggcat taatcttgtc gttgaagatg atttgcgcca
      481 tttcgccgat gtctttggca ggcgcaagga tttcgttttt agccaatgcg tcgctgtatt
      541 tgccggcgtg ggcaaggaag ctgatgcgcg ggtcgctgtg gaacagtttt tgcaggccgg
      601 cgtagcaggt tacgaacagt acgccgacgg cgggaacgag taccacccag acataacggt
      661 cgcgtttcat cttaatcagc accacggcgc acataatcaa ggctacgcct gccagcattt
      721 ggttggcgat gccgaacaaa ggccagagcg agttgatgcc gcccaacggg tcggtcacgc
      781 ccgtgtagag gaagtagccc cacaatgcca cggcgaagaa ggtcgcaatc aggttggcgg
      841 ggatggagtc ggtgttgccg aaaggtttgt agaagatgct gcccaagtct tgaatcataa
      901 aacgtgcgac gcgcgtaccg gcatcgacgg cggtcaggat gaacaaggct tcaaacaata
      961 gggcgaagtg ataccagaac gccatcatcg cctcgcccgg aatcaggcgg ctcataatgt
     1021 gcgccatacc gactgcgagg gtgggcgcac cgcctgcacg ggaaaggatg gtgttttcgc
     1081 ccacttcctt agcggtgtgc aacagggttg ccgcatcgac agggaattgc agcttggtgg
     1141 taatcacttc ggcggcggta ttggcatccg taccgatcag ggcggcaggg ctgttcatgg
     1201 cgaagtacac gccgggatca agcgatgcgg cggcggcaag cgccataatg gctacgaaac
     1261 tttccatcaa cataccgccg taaccaatca tacggacgtg ggtttcgttt tccagcattt
     1321 tcggcgtggt gccggaggaa atcagcgcgt ggaagcccga aaccgcaccg caggcgatgg
     1381 tgatgaagag gaacgggaac aatgcgcctg agaataccgg acccgaaccg tcgataaagt
     1441 gggttacggc aggcatttgc aaagcgggat tgacgatgac gatgcccaaa gccaaggccg
     1501 caatcgtacc gattttcagg aaggtggaga gatagtcgcg cggagtgagc agcaaccata
     1561 cgggcaatac ggaggcgaca aagccgtaaa tcataatcgc ccaagtgagc tggatgccgt
     1621 caaggtcgaa ccaatgtccg atggaacttt tcgccacatc ttcgccgtaa attaccgcca
     1681 gcatcagcaa aataaagccg acgatggaaa tctcgccgat tttgcccgga cggatatagc
     1741 gcgtgtaaat acccataaac agggcaatcg gcatagtggc ggcgatggtg aacgtacccc
     1801 aagggctgtg aaccagtgct tttacgacaa tcaacgccaa caccgccata atgatgacca
     1861 taatcatcaa aataccgatg gaggcaatca cgccggggac agtgccgagt tcctgtttca
     1921 caatatcgcc caaagactta ccatcgcggc gcatagagac gaacaagacc atcatatcct
     1981 gtaccgcgcc ggcaaatacc acgccgaaga taatccacaa agtaccgggc aggtaaccca
     2041 tttgcgccgc caaaaccggg ccgaccaagg ggcccgcgcc cgcaatcgcg gcaaagtggt
     2101 gtccgaacaa tacgcccttg tgcgtcggaa cgtagtccaa gccgtcgttg tggcgttctg
     2161 ccggagtcag gcggttagga tcgagccgca tcacgcggtt ggcgatgtag aggctgtaaa
     2221 aacggtaggc gatgcagtaa acggatatgg cggcggtgac catccatacc gcgctgacct
     2281 gttcgcctcg gctgagggcc agagtggtaa aggatgctaa gccgaccagt accactatgc
     2341 cccaaatgag gaaggttttg agtgatttca tcgaataaat ccttatctca cactgtcgga
     2401 atatgcctga acggcgggaa acggccgaac catctgccgg cacgggcaca aaccggagtc
     2461 tgaatgattg acgaagtatg aaacagtgcg cttgtcggga tttgtgcctt atgcccgcat
     2521 caaacagtgc agggatgcgg gcgcacaaaa cgttaaacgc cgaatatgat tttaacgcaa
     2581 attagcacac tgatagcggt ttttacttgg aatttggaaa aaatttacat tcctccgtgc
     2641 ggacagggag gttcagacgg catcgtcagg caaaaggcgg cgccggaaga cgggtaaaga
     2701 aggggcgcgc aatccggatt attgattcat cgcgggtaaa ttctggttat cgggcttgtg
     2761 tgtttgcgcg tccgtttata gtatggcgtt gccgcagctt ggaatcaggg cggttgtttc
     2821 atatcttatt tttattgggg agcttttatg aatatcaggt ttttcgcgct gaccgtaccg
     2881 gttttgtctt tggcggcctg tgccgtgccg gaggcgtatg atgacggcgg acgagggcat
     2941 atgccgcctg ttcaaaacca agccggcacg gacgattttc gggcgttttc ctgcgagaac
     3001 ggtttgtctg tgcgggtccg ccatttggac agcggcaaag tcgcgttgcg gctagacggc
     3061 aggcgtgccg tcctctcttc cgacgttgcc gcatccggag aacgctatac cgccgaacac
     3121 ggtttgttcg gaaacgcaac cgagtggcac cagaaaggcg gcgaagcctt tttcggcttt
     3181 accgatgcct acggcaattc ggtcgaaact tcctgccgcg cccgttaaac ggggcagcct
     3241 gtttgaaccg ccgtccggat ttttcgggcg gttttttgta ccggttttgt tttggccgtc
     3301 ggctggttcc ggcggttttc gggcgtggcg gattattttt cgttttgttc cgggtttatt
     3361 ctatcggcag cggctcaatg ccaactttaa acctgctccg atttcttcag ggctgttatc
     3421 caatgataaa atgacatcgt ctgcatcaat ggcatcccac gcttccagct tgacatggcg
     3481 gctcgggctg attttcaggc agccgttgtg cagccaaata tccacgctca tcatgttttt
     3541 aaatagggcg cgtctggttt tatagcccaa gttcccgcat agcttggcaa cccaatcctc
     3601 atagcgttgc cgaatttttt cggtatcaaa aaaatcttgg tcttctggac tgtcataaac
     3661 gaaagtcctg ctgtttgcca atgcttgcaa gaccgttgtg cctaaagttt cattgtcggt
     3721 atccaatggc aggatatgag ggggatatag gtggtctatt gccgttaatc ccaaacctga
     3781 acatgtttga acaatcagag cttcttcatt cgtataaaaa actgtccaat aattttgatt
     3841 ctgtttaaaa atcattattt tatctccgta attttgactg taatgttttg acttttgcca
     3901 tactctacca cacgttgcaa ctgcaatctt tgctccttat atattgcacc ccatcaaagg
     3961 gctgcattac ttttctttct aaagattacc attgtataaa aaagtatttt tcttaaacga
     4021 cagggattgc gcccgcgcca tattcagaca ccgcccagat gttgcgctgc ccgatcggat
     4081 gcttcagacg gcatcggaag ggtttgcagt tttggaatat gaagatgata atgtccgcga
     4141 gattgacggc atttgaaagc ggttattccg cataccggag gacacgaaat gaacgaatat
     4201 taccaattaa tcaagcatcc cgatatttcc ctttccccga tttcagacgg catcggggtc
     4261 ggcaatccgg caacgggcga aattttggcg tatgtccgca atacgggttc ggacaaactg
     4321 aaaaacctga ttcaaaaggc ggcggcagcg caaaaattat gggcggcgaa aactgctttg
     4381 gaacgcgccg acatattgtg gcgttggtat tttttagtta aagaaaacaa agaagcactg
     4441 gcgcgcctga tgacgatgga gcagggcaaa agcctgaccg agtcgcgcgg cgaaattgat
     4501 tatgcggctt cgtttgtgcg ctggtttgcc gaagaggcgc ggcggattga cggcgatgtg
     4561 ttaacgagtg taaaagcgtc gcaaaaactg gttgtgttga aacagcctgt cggcgttacc
     4621 gccgcgatta cgccgtggaa cttcccatct gcaatgattg cgcgcaaggc tgcgcctgct
     4681 ttggcggtgg gttgcgcgat gatcatcaaa cccgcatcgc tcacgccttt gagtgcgtat
     4741 gccttggctt cgttggctta cgaagcgggc ataccgcagg atttgttgcc cgtcgtcagc
     4801 ggccgcgcat cggaaatcgg ccgtgaattt gccacgaacc cgattatccg caaaatcagc
     4861 ttcaccggtt cgaccgaagt cggcgcgaaa atttttgccg acagcgcggc ggacattaaa
     4921 aaactcagtt tggaactggg cggcaacgcg ccgtttatcg tgtttgacga tgccgatttg
     4981 gacaaagccg tcgaaggtgc gctcgccagc aagttccgca acagcggtca gacctgcgtc
     5041 tgcaccaacc gcgtttacgc ccaatccggc atttacgacg aattttgtcg caaattgagt
     5101 gaaaaagtag ccgagctcaa attgggcaac ggcttggagg atggcgtcaa ccaagggccg
     5161 ctgattgagg aaaaagcggt ggagaaagtc gagcagcaca tcgccgacgc gcttgctaaa
     5221 ggtgcaagct gcctgaccgg cggcaaacgc agcgcgttgg gcggaacgtt ttttgagccg
     5281 accgtcttaa gcggcgtaac ggcgcaaatg gcggtggctc gcgaagaaac cttcgggcct
     5341 ttgtgtccgg tattccgttt tgaaaccgaa gccgaagtca ttgaggctgc gaacaatacg
     5401 gaatacggtt tggctgctta cctttttacc gctgacaccg cacgccagtg gcgcgtcggc
     5461 gaagcattgg aatacggtat ggtcggcatc aatacgggct taatcagtaa tgaagcggca
     5521 ccgttcggcg gcgtgaaacg cagcggtttg ggacgtgaag gcagcaaata cggtgcggac
     5581 gaatatctgg aattgaaata tctgtgtatg gatgtcgggt gacggatgcc gtctgaacgg
     5641 cagggtttca gacggcgccg cattttaagc agtctctatc tgttgtacaa tgcgccctgt
     5701 ttttacggtt atttttgatt tgaacaagat atgatggaaa acggaaaaac agtcccgaga
     5761 tggcgttttg ccttgaaaag tgcgggctgg catctcttaa tcagcctgtc ggttgcaggg
     5821 ctggcggcat tgctggtttt taaggtttgg tatccttatc cttatgccga gctgacggga
     5881 gggctgtcgc tttatcagct ggtggtggct gtcgatattg tatgtggtcc gctgctgact
     5941 ttaattttgg caagcccgaa gaaaaagaca aaggcacgca tggtcgattt ttccatggtc
     6001 ggcatcatcc agctggcggc tttggtgtac ggtctgcaca gcgtttcttt ggcgcgccct
     6061 gtgatagagg cgtttgaaaa agacaggatt aatgttgtga ccgccgccga agtggcggtt
     6121 gaagatttgc acaaagcgcc ggaagggctg caaagcctgt cgtggttcgg catccgccgc
     6181 attgcattga aagaacctga ggatgcggat gagaagaaca agacgctgga tttgtccctg
     6241 aaaggtatcg agccgagtat gcgtcccgac cggtggctgc cgtattccga caaggaagca
     6301 gaaaaaatcc gcaaacatct gaaaccgctg aaagtcttgg cggatgcgag aaaaacgacg
     6361 gttgcggaca ttctgaaaca ggcaggtctc gccgaagggg aggagctgta ttacctgccg
     6421 tttaccagca gcaggcagaa agagtggata gtcattaccg ataaagaggg caacaccaaa
     6481 ggctacgcgc cgatagacgg cttcatcatc accccttaag cgttgggact ccgtccgcac
     6541 tcgaacatcc gttcttcgcg gcggtagaat cagactgtat ttgagagggg cgcaacccct
     6601 caatcagggc aacacatagg ggaaggcttt atgtgccgtc cgtgtgttga aacatttcaa
     6661 aataagctca tgccgtccga acatcctttc agacggtatg gcattttgcc attgccccga
     6721 taagctgtta aactatttaa attatttcga ccgaaggtac acgcacatga aagaccccga
     6781 gcagagcagc aagcccgccc gccgtttttt gtgcgtaccg tctgttcagg cagcttgagc
     6841 gcttcaggct gccttttcgc gtttgaactt gaggaatacg aaaatcatgg atttcagttg
     6901 gttggcagaa ccgcatacct ggataggttt tgccacgctt ttggtgttgg aagtcgtatt
     6961 ggggatagac aaccttgtct ttgtggcgat tttggcaaac aaggtccagc ccgcacggcg
     7021 cgaccgcgca cggattatcg ggctggggct ggcagtcgtc atccgcatca ttatgcttgc
     7081 ttttatggcg cacatcatca cgctgaccga gccgctgttc caaatcggcg gcctcgccgt
     7141 ttccggcaag gacatgatta tgctcgcggg cggtattttc ctgctttaca aagccaccac
     7201 cgaactgcat gaacgcctcg aagggcacaa ccgttttact gttgccgaca accaaaaaaa
     7261 acacgcgccg ttttggggcg tggtcgcgca aatcctgata ctggatgccg tgttttccat
     7321 cgattcggtc attactgcgg tggcgatggt cgatcatatc gtcgtggcga tgggtgcggt
     7381 cgtcgtcgca atggctgtaa tgatttctgc cagcaaactc ttgaccgaat ttgtcgacag
     7441 acaccctacc gtcgtgatgc tctgccttgg ttttttgttg atgatcggtt tcagcctgat
     7501 tgccgaagcc ttccatttcc acattcccaa aggctacctc tacgccgcca tcggcttctc
     7561 gattttaatc gaactgttta accagatttc ccagcgcaac agccgcaaaa acgactacat
     7621 cggcagctcg tggcgcaaac ggactgctga aaacgttttg ggtatgatgg gcatacgcga
     7681 aagcgtgctt gccgacgcgg gcggcgaatc cggggacgac gcgcattttg aagaaaacga
     7741 aaaatcgatg atacgcagcg tgctgacgct tgccgaacgc ccgattatgg gggtgatgat
     7801 cccacgccgc gacatcgaac ggctggacat ttcccaaagc cgcgaagaac agtgtgccca
     7861 actgcaaaac acgccttaca gccgcctgct cgttgtcgga aaggcgggcg tggacgaacc
     7921 tttgggctac atcaacaaaa aagacctgct gtcccaactg ctggaaacag gcggtctcga
     7981 cattcagacg gcattgcgcc agccgctcgt cctacccgac ggcacgaccg ccttgggcgc
     8041 gctcgaactc ttccgccaaa gcagcgcgga ttatgctttg gtggtggacg agttcggcgc
     8101 ggtattgggc atggtaacca tgaaagacct gctcgaaacc atcgcaggcg agttccccga
     8161 agaatttgag cgcgaagaag aaccagccgt tcaggggaat cccgatgaaa gcctgacggt
     8221 ggaaggcgcg ttggaatatg tggagctggc atcccaactc aatctgccgc agcaggagga
     8281 agatgccgat ttccatacgg ttgccgggct gattatggaa gaattgcaaa ccatccccga
     8341 tgtcggcgat tttgccgatt tccacggctg gcggtttgaa gtggtcgaaa aagaagggca
     8401 gcgcatcgag cgggtcaaaa tcaccaaatt gcccgaagaa taagcattca ggatagaaaa
     8461 tgaacgtttt gatttccaac gacgacggct acctctccga aggtattgcc gttttggcgc
     8521 gcgttacggc ggaatttgcc aacgtcaggg tggttgcgcc cgaacgcgac aggagcgggg
     8581 tcagcaattc gctgacgctg gaacgccctt tgcagttgaa acaggcgcaa aacgggttct
     8641 actatgtcaa cggcacgccg accgactgca tccacatcgg gcagtctgta ttttcggatt
     8701 ttcaggccga ttttgtcttt tcgggcatca accggggcgc gaatatgggg gacgacacgc
     8761 tttattcggg gacggttgcg gcggcaaccg aagcctacct tatgggcata cccgctgtgg
     8821 cgttttcctt aaacgacgct tccggacgct attgggcaac cgcagaaaag gcactgtgga
     8881 cattgttggc gcattttttc aaaacccccc cgcagttccc tattttgtgg aacatcaata
     8941 tccccgccgt cgcgccggaa gatgtgcggg gcattaaaat cgcccgtttg ggcaggaggc
     9001 atcacggtca gaacgtcatc cccgcgcgca atccgcgcgg cgaacagatt tattggatag
     9061 gcccggtagg cagggtttcc gacaaagaag agggaacgga tttcggtgaa tgcggcgcag
     9121 gtttcattac cgtaacgccg ctgcaaatcg acctgaccgc ctatccggac atggcggaaa
     9181 cagcggtgtt ctggcatgcg gactgaccgt ttcatcaaat atagtggatt aacaaaaacc
     9241 agtacggcgt tgcctcgcct tagctcaaag agaacgattc tctaaggtgc tgaagcacca
     9301 agtgaatcgg ttccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt
     9361 gttaatccac tataccgtcg ggctttgcgc ttgagaagaa cgcgcatttt tattatgata
     9421 taccgcattc aggctatata tcggaacatg aaggttatct tatgttgaaa caaacgacac
     9481 ttttggcggc ttgcgcctcc tttgccgcac tgttgggcgg ttgtgctacc cagcagcctg
     9541 cccccgtcat tgcaggcaat tcaggtatgc aggacgcgcc gtcttcggca gtttacaaca
     9601 acccctatgg agcaacgccg tacagcccgg ctcctgccag cgatgcgcct tatgtgccgc
     9661 cggtgcaaag cgcgccggtt tatacgcctc ctgcttatgt tccgccgtct gcacctgccg
     9721 tttcgggtac atacattcct tcttacgcac ccgtcgacat caacgcggcg acgcatacta
     9781 ttgtgcgcgg cgacacggtg tacaacattt ccaaacgcta ccatatctct caagacgatt
     9841 tccgtgcgtg gaacggcatg accgacaata cgttgagcat cggtcagatt gttaaagtca
     9901 aaccggcagg atatgccgca ccgaaagccg cagccgtaaa aagcaggccc gccgtaccgg
     9961 ctgccgcgca accgcccgta cagt
//
LOCUS       DBBZXW010000069         9912 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.069, whole genome shotgun sequence.
ACCESSION   DBBZXW010000069 DBBZXW010000000
VERSION     DBBZXW010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9912
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.069"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(373..1501)
                     /locus_tag="ACJJD2_001510"
                     /pseudo
     CDS             complement(373..1501)
                     /locus_tag="ACJJD2_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            complement(1806..3053)
                     /gene="fabF"
                     /locus_tag="ACJJD2_001511"
     CDS             complement(1806..3053)
                     /gene="fabF"
                     /locus_tag="ACJJD2_001511"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HGG7580019.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLTGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPGIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSLRMIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(3209..3445)
                     /gene="acpP"
                     /locus_tag="ACJJD2_001512"
     CDS             complement(3209..3445)
                     /gene="acpP"
                     /locus_tag="ACJJD2_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG7580020.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            3677..4684
                     /locus_tag="ACJJD2_001513"
     CDS             3677..4684
                     /locus_tag="ACJJD2_001513"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HGG7580021.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTGNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPKPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVYGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGRPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            4700..4879
                     /locus_tag="ACJJD2_001514"
     CDS             4700..4879
                     /locus_tag="ACJJD2_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580022.1"
                     /translation="MPSERTFCRSDGIFISFFRLPPLENPLRAALFETKQTPAANRTI
                     LIRSQSKSGGKLLNI"
     gene            5017..5340
                     /locus_tag="ACJJD2_001515"
     CDS             5017..5340
                     /locus_tag="ACJJD2_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580023.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            5427..5708
                     /locus_tag="ACJJD2_001516"
     CDS             5427..5708
                     /locus_tag="ACJJD2_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580024.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            5761..6234
                     /locus_tag="ACJJD2_001517"
     CDS             5761..6234
                     /locus_tag="ACJJD2_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HGG7580025.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            6488..6823
                     /locus_tag="ACJJD2_001518"
     CDS             6488..6823
                     /locus_tag="ACJJD2_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580026.1"
                     /translation="MTVDKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLLSKQGDPDFQGFAEDALDEI
                     SLFIFKKRP"
     gene            7003..9693
                     /gene="glnE"
                     /locus_tag="ACJJD2_001519"
     CDS             7003..9693
                     /gene="glnE"
                     /locus_tag="ACJJD2_001519"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HGG7580027.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFSYAYYQDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFIYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRKLHRQIHS
                     EVGKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTRETLEKLAESGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQRQLLAESMGFDDYADFLNAL
                     NQHRNQVNRLFNEILSEPEEQTQSNSEWQWVWQDKPDEEERQGRLKEHGFDAETIATR
                     LDQIRHSHKYRHLSAHAQPRFDAVVPLFVQAAAAQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNWLSTATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALADEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLDNYGNIALLNIATDCGLIDKTLAEQSRTAYRFYRRQ
                     QHNTKLRDAEKTEVSGELLAHYGNVRKLWREVFGEEAATA"
BASE COUNT         2483 a         2470 c         2578 g         2381 t
ORIGIN      
        1 gaatttatcg gaaatgaccg aaactcaacg aacctggatt cccgctttcg cgagaatgac
       61 gagggtttgg cgggaatgcc gagggtttgg gatttctgtt tttgaatttc tgtttttgtg
      121 agaatggcaa gattttcggt tcttgtatgg ataacgagat tttagatggc gggaatttgt
      181 cgggaaaaca gcaaccctcc gccgtcattc ccacgaaagt gggaatctag aaactcaaag
      241 ttgcaagaat ttatcggaaa tgaccgaaac tcaacgaacc tggattcccg ctttcgcggg
      301 aatgacgggg gtgtggcggg aatgacgggg gtttatcaga aatgaccgaa actcaaaagc
      361 gggcagcctt gtttacgcct tcaaaatatc gagcaatttc aaatcgactt tttcggcatc
      421 gaatttatct ttggcaatcg cataacttgc attccccatc aggcggacgg cttccctgtt
      481 ttcgataaaa taaatcattt tttcggccaa gatgcgggga ttccaaggtt cgatcaggaa
      541 gccgttgacc ttgtcggcga ccgtttccct gtatccgggg acatccgtcg taatcactgc
      601 cctgccgacg gccattgcct cctgagtgct tcggggaacg ccttccctat aataagacgg
      661 caatacgaat atatgatgtt cttttatcac ttcggaaaca ttgttcacaa aaccggggaa
      721 acggataata tcgcgggcgg caagccgttc caaatcgccc ccccccgcgt gatttgtcga
      781 ttgcgcccaa agcggtaaaa accgtatcgg ggtatttgtc cttaacctgt tccgccgccc
      841 gaataaaatc atcaatcccc ttttctttca gaaatctgcc gataaagagg aattttacgg
      901 gttctttttc atcgggaata tccgcctcgg aataaggata ttgccgcgaa tccagaccga
      961 ttccgcccaa aatatggatg ttttttattt tgatgccgta tttgtccgtc agttcgtctt
     1021 tgtcgtcggg gtttaataca atcaggcttt ccaacatcgg cagggcaatg cggtataagg
     1081 caatcaagat cccctttatg atttttgttt ttaacggtat gccttccggc tgcggggtaa
     1141 atgcgaatcc caaaccttcc agcatcccga cgattctggg cacgcctgcc agttttgcgg
     1201 caaaagtgcc gaaaatcacg ggttttgcga aataagggaa aaccaaatcc ggcgatattt
     1261 ttttgagttc tttaaagatg aggaaggtgg attttatatc ggaaaacggg ttcagcccgc
     1321 tgcggtttga acggtaggta acgggtgtaa cccccatttc cctgataata tccaattcat
     1381 tatcggaaaa ctccgataca aaggcataca cctgatggtt tttgccgatt aattttttaa
     1441 tgacgggggc gcggaaaccg taaatgctgg atgcgactgt tgtgataaaa acgattttca
     1501 taaggcggac accttgaata tggattggaa atgcggtctg ctacggcagg gtttcatcct
     1561 gtaacccagc aaggcttggg tttgcctgcg tattatagtg gattaacaaa aaccggtacg
     1621 gcgttgcccc gccttagctc aaagagaacg attctctaag gtgctgaagc accaagtgaa
     1681 tcggttccgt actatttgta ctgtctgcgg ctcgccgcct tgtcctgatt tttgttaatc
     1741 actataaaaa tgccgtctga aacggtttca gacggcattt cgatgtcggc ggcggctttg
     1801 cggaatcagc ctttgaagcg tttgaagacc agcgtgccgt tggtgccgcc gaagccgaag
     1861 gagttggaaa tggcaacgtc gatttccgcg tcgcgcgctt cgttggcgca gtagtccaaa
     1921 tcgcagccgg cttcaacgtc ttgttcaaaa atgttgatgg tcggcgggat tttgccgtcg
     1981 tgtatcgcca aaatgctgta cacggcctcc acgccgcccg ccgcgccgag caggtggccg
     2041 gtcatggatt tggtcgagct gacgacggtt ttgtaggcgt gttcgccgaa cgcgcgtttg
     2101 agggctttgg tttcgttggc atcgcccaag ggggtggacg tgccgtgcgc gttgacgtaa
     2161 tccacgtctt cgggattgat gccggcatct ttcagcgcgc gggtaacggc aagggcgggg
     2221 ccttcttcgt tcggcgcggt gatatggtaa gcatcggaac tcatgccgaa gccgacgatt
     2281 tcggcgtaga ttttcgcgcc gcgttttttg gcgtgttcca attcttccaa caccaatatg
     2341 cccgcgcctt cgccgataac gaagccgtcg cggcctttgt cccacggacg ggaagcggtg
     2401 gcggggtcgt cgttgcgggt ggagagggct ttcatcgcgg caaaaccgcc cacgcccaaa
     2461 gtgctgattg cgccttccgc gccgccggca accattatgt ccgcgtcgcc gtatttaatc
     2521 atacggaggg aatcgccgat ggcgtgcgcg ccggtggtgc aggcggaaac catcccgtag
     2581 ctcgggccgc ggtagccttt gaggatggta acgtgtccgg aaatcagatt aatcagagaa
     2641 ccggggataa agaaagggtt gattttgcgc gcgccgcctt cgattacggc tttgccggtg
     2701 acctcgatgc cgggcagtcc gccgatgccg gaaccgatgt tcacgccgat gcggtctttg
     2761 tcgaggtttt ccacatcgtc caaacccgaa tcggcgattg cctgcaatgc ggcggcaatg
     2821 ccgtagtgga tgaatacgtc catccggcgc gcttctttcg cgctgatgta ttgtccgatg
     2881 tcgaaaccgc gcacctcgcc ggcgacacgg ctgttgatgt cggatgcgtc aaagcgggta
     2941 atcgcgccga tgccgctttt gccggtgagc agggtgtccc aagcctctgc gacagtgttg
     3001 ccgacagggg aaacctgacc taagcctgta atgactactc ttctctgact catgataacc
     3061 tcgctgttgg ttgtcggaat gggggcatat gcggctgtcg tgcagatgcc gtctgtaatt
     3121 tgcggcaggg gttcaaacag tttgccatat aagggaaaag cctctattgc gcggtgcagc
     3181 agaggctgtt gtgtcgggcg acgaccggtt agccgttgtg ggcattgatg tagtcgatag
     3241 ccagttggac ggtggtgatt ttttcggcat cttcgtcggg gatttcgcag ccgaatgctt
     3301 cttccaaagc cataaccagc tccacggtgt ccaaagaatc cgcgcccaag tcgtcttgga
     3361 aagaagattc gtttttcacg tcggcttcgt ttacgcccag ttgttcagca acaatttttt
     3421 taacttgttg ttcgatgttt gacatatcag tcgttccttt atgccttgcg gcaggttgtt
     3481 taagggaaat aaatcggtgg tattgtaccg acttttaata gagttttcta tctaatgact
     3541 attatatcaa tatttgccga tttgtacatt tttgggtgcg gcgggttttg tcgttcaagt
     3601 ttgacctgtg tgccgtatgt ttgacgggat ttcggttaaa atgacggcat ttccatctga
     3661 agcagaaagc cctgtcatgt atccacttgc ccgccgcatc ctgtttgcac tcgatgccga
     3721 gaaagcccac cacttcacgc tcgacgcgct ctacacggtt tataaattgg gtctgattcc
     3781 cgtaaccggc aaccgtacca aacctgtaaa attgatgggt atggatttgc ccaaccctgt
     3841 cggacttgcc gctggactcg acaaaaacgg cgaatacatc gacgcattgg gcgcgctcgg
     3901 ctttggtttc atcgaaatcg gcacggtaac gcccaaaccg cagcccggca acccgcagcc
     3961 gcgcctcttc cgcgttcccg aacaccaagg catcatcaac cgcatgggtt tcaacaacca
     4021 cggtatcgac accatgatac gcaacatcga aaaaagtaaa ttcagtggcg tattgggcat
     4081 caacatcggt aaaaacgcgg ttacacccat cgaaaacgct gccgatgatt atttaatctg
     4141 ccttgaaaaa gcctacgcac acgcaagtta cattaccgtc aacatttcct cgcccaacac
     4201 caaaaacctc cgcgcgctgc aaggtggcga cgagttgagc gcattgcttg aggctttgaa
     4261 aaacaaacag gcacagcttg cctctgtata cgggaaatac gttccgctcg ccgtcaaaat
     4321 cgcccccgat ttggatgaag cacaaatcga agacatcgcc cacgttgtca aatccgtcga
     4381 aatggacggc atcatcgcta ccaataccac catcgacaaa tcaagtctcg gcagccatcc
     4441 gctcgcaggc gagcagggcg gtttgagcgg gcggcccgtt catgaaaaaa gtaatcgggt
     4501 gttgaagctg ttggcagacc acatagacgg caagctgccg attatcggcg taggcggcat
     4561 tatggaaggc agggacgcgg cagataaaat ccgcttgggc gcaactgccg tccaggtgta
     4621 cagcggattg atatacaaag gtccggcatt ggtcaaagaa tgtttgaagg ctttggcgcg
     4681 atgacgcgat ccgcccaaaa tgccgtctga acgcacgttt tgccgttcag acggcatttt
     4741 catttccttt ttccgcctgc cgccccttga aaatccctta cgcgccgccc tgtttgaaac
     4801 aaagcaaacg cccgccgcga accggacaat cttgatacgc agccaaagca agtccggcgg
     4861 taagttgtta aatatataag caattgataa aaaaaataat tttatgccgt ggtggacggt
     4921 ttgagaaaac gcaaaatatg aacggcgttg aaattcatga tgtggaaaat aaggatacgg
     4981 cggataatca aaagatttta tatttaagga tttgatatgt ttaaggacga actaaatgaa
     5041 tttatccgat tgatatccga tccggaaagt gaattggatg aatggtattt gagtgatttt
     5101 aaagatgaac atatatggga aatgcaaagt tacgaagcat tttcatgttt gcgggaagca
     5161 gtcccctatt tgtttgctta tccccgatac gggtatgaac tgttggagat aatttccgcg
     5221 ttaaaagaaa catctgatac gacagaatta ttttatgagc cgggtatcgt gcctttgctg
     5281 attgatttat ataaagaaga tagttatctg gtaaatatgg tcaaacggat attcaaatga
     5341 tgaaaggggc gcgggcgttt gcttggcgga aggcaggtaa ctcaatttga aggacgcgga
     5401 agccgatacg ttaaaaagga tgaaaaatgg aaaacgggca acggaataac cggtttcctt
     5461 tggaaaaacg aattttttat ctggagcatt cggggcggta tctgatgatt tgcgccttat
     5521 cggattattc ccaaaacaaa catactgtcg ttatggcaaa tttcatctat ccggatgaaa
     5581 aaacggattg gcggaatttg gatgatttat tcaatgagtt ggttttagag gaattgcagg
     5641 cttcatttat ggattggcat ccgactgttg aagaggcaat cagccgtcat ttggaagact
     5701 tttcgtaaca ggcgtcaatc ggaaggggcg gaatgacggg gcaggcaatc ggagtaaaaa
     5761 atgaaccttg atttaaccgc gcaaaaagtc cgtctttctt ggaaggatat tctgtggggg
     5821 tatgggaata aatacttggg ttgggctgat gtggcagctt atgcccgaaa aatgacgctt
     5881 tcagatcatg atgaacgtgt gttcaaacta tctttaatca acaaatccaa tattcttgaa
     5941 ttaaagcctg ttctggaaga tttggcttcg gaaatgaggg attattcccc taaaaattgg
     6001 ctgtacgtcc tcttaagcga tgtattccat agaaaagaag aatttgagga tcctttgggg
     6061 gaagttgaaa aaatttatgc agattttgat tatccggaag aaatagaatc atttgtcagg
     6121 tatatgccgc ccaaagacgg ttatattcct tctgcccaca cctatgaaga aaatattgcc
     6181 cggttatatt ctcactggga acactatttg aacaacggcg gagggcaggg ttaaaaccgg
     6241 caatccgatg ccgtctgaag cattatccgg ccttcagacg gcaaacggat tagagcggaa
     6301 gatttgaaag cgggggcggg ctgcattccg gaagcggcaa aacccgaacc gcccgcatcg
     6361 ttgccgataa accgataagg aaatcgtttt gccggaccgg gtgcaaatgt ttgataacaa
     6421 tcctgccgcc cggcaaaaat gctttaaaga aagcaggatt ggttaattta aaaggaaaaa
     6481 ttaaaaaatg acggttgata aggaacaagt agaaaagatg atttattctg aaaataaaca
     6541 gagtgttatt gacggtatgc tcggtatgac cttcagctcg gaggaggatg aaatcccctg
     6601 gatttccgag aagttgacgg agttgtcgaa acataaagac ttggatattg ccagattgtc
     6661 attaacctgt ttcggacatc tcgccaggat gcatgaaaat atcggcgatt gcgataaagt
     6721 gattgcttta ttgctctcaa aacaaggtga tccggatttt caaggttttg ccgaagatgc
     6781 gttagacgag atttctttat ttatatttaa aaagcgtccg taagcgcgga ttaaacctgt
     6841 caatccgatg ccgtctgaag cgttatccgg ctttcagacg gcatcgaagg ttgctatgat
     6901 atagtggctt gactttaaac cggtacggca tcccctcgcc ctgtcctgat ttgaagtgaa
     6961 tccgccatca tcttcctgcc attttttcaa acggaatccg aaatgtccga caaccgcctc
     7021 gacaccgccc gccgccattc cctcttcctc gcccgccagc tcgacaacgg caaactcaag
     7081 cccgaaattt tcctgccgat gttggacaag gtgttgaccg aagcggattt ccaagccttt
     7141 gccgactggg acaaaatccg tgcggaagaa aacgaggaag aattggcgcg gcagttgcgc
     7201 gggttgcgcc gttatgtggt gtcgcagatt atcgtgcgcg atatcaaccg catcagcgat
     7261 ttgaacgaag taacccgcac gattacgctg tttgccgatt ttgctgtgaa taccgcattg
     7321 gatttttcat acgcctatta tcaggatatg tacggcacgc cgatcgggcg ttataccaaa
     7381 tcgccgcagc atttgagcgt ggtggcgatg ggcaaggcgg gcggctatga gttgaacgtg
     7441 tcttccgaca tcgatttaat ttttatctac cccgaatcgg gcgataccga cggtaggcgc
     7501 gaacgcggca atcaggaatt tttcaccaaa gtcgggcaga aactgattgc gttgctgaat
     7561 gacattaccg ccgacgggca ggtgttccgc gtcgatatgc ggctgcggcc ggacggcgat
     7621 tcgggcgcgc tggtattgag cgaaaccgcg ctggagcaat atttgattac gcaggggcgc
     7681 gaatgggaac gctacgcgtg gtgcaaaggc cgcgtggtca cgccgtatcc gaacgacatc
     7741 aaatcgctgg tgcgcccctt cgtgttccgc aaatatctgg attacggcgc gtatgaggcg
     7801 atgcgtaagc tgcaccgcca aatccacagc gaagtcggca aaaaagggat ggcggacaac
     7861 atcaaactcg gcgcgggcgg catccgcgaa gtcgaattta tcgcccagat tttccagatg
     7921 atacgcggcg ggcaaatgcg cgcgctgcaa ctgaaaggca cgcgggaaac gctggaaaaa
     7981 ctcgccgaat cgggcattat gccgtctgaa aacgtcgaaa ccctgcttgc cgcctaccgc
     8041 tttttgcgcg atgtcgaaca tcgtttgcaa tattgggacg accggcaaac ccaaaccctg
     8101 ccggcttcgc ccgaacagcg gcaactgctt gccgaaagta tgggatttga tgattacgcc
     8161 gattttttga atgctttaaa tcaacatcgg aaccaagtca atcggttgtt caacgaaatt
     8221 ctgagcgaac ccgaagaaca aacgcaaagc aacagcgaat ggcaatgggt ttggcaggac
     8281 aagcccgacg aagaagaacg gcaaggccgt ctgaaagaac acgggtttga tgccgaaacc
     8341 attgccacgc ggctcgacca aatccgccac agccataaat accgccacct ctccgcacac
     8401 gcccagccgc gtttcgatgc ggttgtgccg ctgttcgtac aggcggcggc agcgcaaagc
     8461 aacccgaccg atacattgat gcggctgttg gattttctcg aaaacatcag ccgccgatcc
     8521 gcctatctcg ccttcctcaa cgaacatccg caaaccttgg cgcaactggc gcagattatg
     8581 ggccaaagtt cttgggtggc ggcgtatctg aacaaatatc cgattttgtt ggacgaactc
     8641 atcagcgcgc agcttttgga taccgcgttt gattggcagg cgctcgccgc cgccctttca
     8701 gacgacctca aagcctgcgg cggcgatact gaagcgcaaa tggacaccct gcgccatttc
     8761 caacacgccc aagtcttccg cctcgccgtt caagacctcg ccggactgtg gacggtagaa
     8821 tccctctccg accagctctc cgcccttgcc gacaccatcc tcgccgccgc cctgctgtgc
     8881 gcgtgggcgg acatgcccaa aaaacaccgc gacaccccgc aatttgccgt cgtcggctac
     8941 ggcaagctcg gcggcaaaga actcggctac gcctccgacc tcgacttggt ctatctttac
     9001 gacgatcccc atcccgaagc aggcgacgtg tacagccgcc tcgcccgccg cctgaccaac
     9061 tggctttcca ccgccaccgg cgcaggcagc ctctacgaaa ccgacctgcg cctgcgcccc
     9121 aacggcgacg caggtttcct cgcgcacagc atcgccgcct ttgaaaaata ccagcgcgaa
     9181 aacgcgtgga cgtgggaaca ccagtccctt acccgcgccc gcttcatctg cggcacaccc
     9241 gaaattcaga cggcattcga ccgcatccgc accgaaatcc ttaccgccga acgcgaccaa
     9301 accgccttgg cagacgaaat catcgaaatg cgcgaaaaaa tgttccccac tcatccccca
     9361 gccgacagca acgtcaaata cgcacgcggc ggcgtggttg atgtcgaatt tatcgtccaa
     9421 tatctgatac ttgcccacgc ccgaaaatat ccgcaactct tggacaacta cggcaacatc
     9481 gccctcttga acatcgccac cgactgtggc ctcatcgaca aaacccttgc agaacaaagc
     9541 cgcaccgcct accgcttcta ccgccggcag caacacaata ccaaactgcg cgacgcagaa
     9601 aaaaccgaag taagcggcga attgctggca cattacggca atgtcaggaa attgtggcgg
     9661 gaagtgttcg gcgaagaagc ggcaaccgcc tgaataaaaa atgccgtctg aagcctgaca
     9721 atctgggttt cagacggtat tttcgtaccg tgccgtttta aggttgcggc agagctaaag
     9781 cgatttatcg ggaatggctg aaacccaaaa accggattcc tctttcgcgg gaatgacggg
     9841 atttcaggct tctgtttttg tgggaatgat gggatttttt atccaagcaa aaatcaaaac
     9901 aaacaaataa ga
//
LOCUS       DBBZXW010000070         9796 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.070, whole genome shotgun sequence.
ACCESSION   DBBZXW010000070 DBBZXW010000000
VERSION     DBBZXW010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9796
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.070"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(12..1307)
                     /locus_tag="ACJJD2_001520"
     CDS             complement(12..1307)
                     /locus_tag="ACJJD2_001520"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HGG7580028.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMEEIEKQVGLERAQWFW
                     QQSLQAVELVDERVRKHAVDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGAQIFEQSPMTRIEP
                     HQNGWLVYTPEGSVECKNLVYAVNTYAGLSPIFKPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDHEFIDDPARMTELVRQDMLKVFPQL
                     ADVRIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1433..2320)
                     /locus_tag="ACJJD2_001521"
     CDS             complement(1433..2320)
                     /locus_tag="ACJJD2_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HGG7580029.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGACPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAH"
     gene            complement(2320..3285)
                     /locus_tag="ACJJD2_001522"
     CDS             complement(2320..3285)
                     /locus_tag="ACJJD2_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HGG7580030.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWSTLNPFGDGENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3301..4425)
                     /gene="potA"
                     /locus_tag="ACJJD2_001523"
     CDS             complement(3301..4425)
                     /gene="potA"
                     /locus_tag="ACJJD2_001523"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HGG7580031.1"
                     /translation="MTATTASSAKPYLKIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLGNG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4620..4727)
                     /locus_tag="ACJJD2_001524"
                     /pseudo
     CDS             complement(4620..4727)
                     /locus_tag="ACJJD2_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4806..5075)
                     /gene="rpsO"
                     /locus_tag="ACJJD2_001525"
     CDS             complement(4806..5075)
                     /gene="rpsO"
                     /locus_tag="ACJJD2_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HGG7580032.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5298..6233)
                     /gene="secF"
                     /locus_tag="ACJJD2_001526"
     CDS             complement(5298..6233)
                     /gene="secF"
                     /locus_tag="ACJJD2_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HGG7580033.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6237..8090)
                     /gene="secD"
                     /locus_tag="ACJJD2_001527"
     CDS             complement(6237..8090)
                     /gene="secD"
                     /locus_tag="ACJJD2_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HGG7580034.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALQNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(8302..8568)
                     /gene="yajC"
                     /locus_tag="ACJJD2_001528"
     CDS             complement(8302..8568)
                     /gene="yajC"
                     /locus_tag="ACJJD2_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HGG7580035.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAISAKVD"
     gene            8696..>9796
                     /locus_tag="ACJJD2_001529"
     CDS             8696..>9796
                     /locus_tag="ACJJD2_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HGG7580036.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCQPQKGKIFRL
                     DDDTAISTGSLSAARFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2508 a         2604 c         2435 g         2249 t
ORIGIN      
        1 gcctgcgacg cttaacggct gtctttccac tgataatatt tcgagccgag gaaagaaccg
       61 agtttgcgca aaaacggttg caggataata ttcggctggc gcaaccgctc aaacggcttc
      121 agacggcatt cgtcccctaa aattgcttcg gcaaccgcca gacctgcaat gcctgttatc
      181 gccatcccgt gtccggaata accttgcgca taaaaaacat tcgcggccaa acgtccgaaa
      241 tgcgggacaa ggttggcggt aatgtcgcac tccccgcccc acgaatattc gattctaaca
      301 tcggcaagct gcggaaaaac tttaagcata tcttggcgga caagttcggt catacgcgcg
      361 ggatcgtcga taaattcatg gtctttaccg ccgaaaagca atctgccgtc cgcactgagg
      421 cggtaatagt ccaaaatatg gcggttgtcg catactgcca tattgttgcg gataagccct
      481 tttgcgcgcg cccccaaggg ttcggtggca ataataaagg tgctgacggc aatcgccttg
      541 cgttccaaag gcttaaatat cggactcaaa ccggcatagg tattgacggc gtacaccaga
      601 tttttgcatt cgacgctgcc ttcgggcgtg taaaccagcc aaccgttttg atgcggttcg
      661 atgcgcgtca tcggggattg ctcgaaaatc tgcgcaccgg cttcggcagc ggcacgagcg
      721 atgcccaaag tgtaattgag cggatgcagg tgtccggata aggggtcgaa ttgtgcccct
      781 tggtacatat cgctgtcaag ctgctgtttc aactcggctt tatcccaaag ttgataatga
      841 ctcgcaccgt aatgccgttg ggcgtgttca tgccactgct gcaactcttc ccaatgctgc
      901 ggacggacgg caaccgtggc ataaccgcgc tgccaatcac aatcgacggc atgtttgcgg
      961 acgcgttcgt ccaccagttc gaccgcctgc aaagactgtt gccaaaacca ttgcgcccgc
     1021 tccaaaccaa cctgtttttc aatttcctcc ataccgcagg cgtagtcgct gataacctga
     1081 ccgccgctcc tgccggacgc gccgaagccg atacgcgcgg cttccaacac aaccgtttca
     1141 tgtccctgct ccgccaaggg caatgcagtg cacaaaccac tcaatccgcc gccgatgata
     1201 caggtatcgg ttttcagacg gcattgaagt ttcggataaa cagtatgagg attaaccgaa
     1261 ctaaaataat aagaaggcag atattcttga aaatcaggac gaatcattat gtttacttta
     1321 tcaggtgtat tttcagacgg catgatatgg tttgccgtac catgccgtct gaacgggaaa
     1381 ttactttaag aaaacaggct gacctgataa tgcggtcagc ctgccctgtc ggtcaatgcg
     1441 ctttctcagc agccaatttt tcttggcggt aggcttctgc cgcttctcgg tcgcgcttgg
     1501 ttgcctgcct catcatccaa taattgacga tgatgaccaa tgttccgatg atgccgatta
     1561 ggatggtcgc caagacattc atctgaggat caagacccag cttgattttg gagaaaatca
     1621 cctgcggcaa tgtggatgaa ccggggccgg agaggaatga ggtaattacc aaatcatcca
     1681 aagacagggt aatgccgagc agaaagcctg aagcgatggc aggggcaatc aaaggcaaag
     1741 tgatgacaaa aaagattttc agcggacacg cgcccaaatc cattgcggct tcttcgagcg
     1801 attggtcaag ctcaaccaga cgcgaacgga taacaacggt aatgtacgcc atacacagcg
     1861 tcgtatgtcc gaggaagatg gtgaaaaagc cacgatcgaa gtagagatgt tgtaaccatt
     1921 cgctgccctg caaaaatatc tgtacctgaa taatcagcag cagcatagac agaccggtaa
     1981 tcacgtcggg catcaccata ggtgcggaaa tcatgccagc gaacaaggta ctgccgcgaa
     2041 aacgtttaat ccgcgccatc gcatagcctg ccagcgtgcc caaaacgacg gcggcaagcg
     2101 aagacacaac ggcaatccgc agcgacagcc aagcggcttc caagatggtg tcgttttcca
     2161 gcaatgcgcc gtaccacttg gtcgaaaagc cgccccaaac ggttaccagc ttggattcgt
     2221 taaacgaata gatgaccaaa acaaccagcg ggatatacag aaacgccagc gacagtgcca
     2281 acatcagttt caagaaccaa gataatttgg atttctgcat tatttggctc cttcttccaa
     2341 ttcgcggttt tcataatgct gaaacagggc aatcggcacg accagcagcg cgaccatcac
     2401 gacggcgacg gcggaagcca gcggccagtt gttttgatcg aagaacgcct gccacaagac
     2461 tttaccaatc atcaggtttt ccgaaccgcc gaccagctcg ggaatgacga actcgccgac
     2521 agcagggacg aaaaccagca tggagcctgc aataatgccg gttttcgaca aaggcagggt
     2581 aatcgtcaag aacgatttga ccggccccgc gcccaaatcg gaagccgctt caagcaggcg
     2641 gttgtcgagt ttcaccagtt gcgtgtatag cggcagaatc ataaacggca gataggcgta
     2701 aaccatcacc aaattgagcg aaaaggcatt gtagaacaaa tccaaaggct cgctgataat
     2761 acccatttta atcaacaggt tgtttacaat gccgttatgc ccgagcagac ccatccacgc
     2821 atagacgcgc aacaggaacg atgtccaaaa gggcagcata atggcaagca gcaaaccatt
     2881 gcggacagaa ggattggcac gagaaatcgc ataggcggtc ggataaccga ccaacagaca
     2941 aattaccgtc gtagtcagcg cagtcttaat tgaagaccaa taagtcatca gatagatatt
     3001 gctgttttca ccgtcgccga acggattgag cgtactccaa aaattttgga agatgtctgc
     3061 ataattttgg tagctgacag caatattcag acgacccaaa tcctcatcta tcgtcgttaa
     3121 aggagtaaac ggcgggatgg cgatttcttg ttcggcaaag ctgattttca gcacgatggc
     3181 gaacggaatc agaaacagca ccaaaagcca aatatacggt acggcaatca ccgcacgctg
     3241 ccccggacgg cggaacagtt tgtttttcag tttattaagg ttcattgcat tccccttaaa
     3301 tcaacggaac aacggagtcg gttggttttc cggccagctg atatagacgg tttcgtccca
     3361 agtcggcggt gtaatgttgc gcacatacca gtaaggggcg gggacttggc ttttgacgac
     3421 gcgcccgttg ccgagcttga tatggtaaat ggcgaagctg cccaaatagg cgatttcttt
     3481 taccgtgcct ttcgcccagt tgtagtcgcc caaatattcg ggtttttctt tatataaatc
     3541 aatatcctct ggtcgaatac taacccaaag gtcctgctcg ctcggaccac ccaaaccgtg
     3601 atcgatgcgg acgtggtttt ccaaaccttc gcattcgata acggcatagt cggcatgatc
     3661 ttcaatcacc acaccgtcaa agatgttggt ttcgccgata aactcggcag tgaagcggct
     3721 gttgggatag tcgtacacgt cgctgggtgt gccgacttgc tgcaactgac cgtcagacat
     3781 aatggcgatg cgggtcgcca tcgtcatcgc ctcttcttgg tcgtgcgtaa ccataataca
     3841 ggttacgccg acttgttcca gcgtattgac caactcaagc tgggtttgtt ggcgcagttt
     3901 tttgtccaat gcaccgaggg gctcatccag cagtagaatt ttcggacgtt ttgccagact
     3961 gcgtgccaaa gcaatgcgct gctgctgacc gccggacaat tggtgcggtt tgcgtttagc
     4021 aaatttggtc atctgaacca ggcggagcat ttcttcgacg cgcgcggcga tttcgccttt
     4081 aggcattttg tcctgtttca gaccgaaggc aatgttttgt tctacggtca tatgcggaaa
     4141 aagcgcgtaa ctttggaaca tcatattgat ggggcgatca tagggtgcaa gtttggtaat
     4201 atcctgacca tcaaggataa tttttccctg attgggactt tccatacccg ccagcatacg
     4261 cagcagtgta gattttccgc tgccggaact gcccaaaagg gcgaagattt cgtgttgata
     4321 aatgtccaag tcgatgttat cgacagcgta attgtcacca aactttttca ccaaaccttg
     4381 gattttgaga taaggtttgg ctgaagacgc agtggttgcg gtcataatgg caatactcca
     4441 ataaaaagac gagtaccggc aaaacggatt ttcgaatggg tgataaaaag ctgtttgatt
     4501 gctggcggga gttaaacgtt tgatgccgtc tgaaactctt gtaaagcgca cgggcagcat
     4561 gaaatggaac aagattccaa agaactttat attatattag tttatgcggt tttcgggcaa
     4621 tatagtggat taaatttaaa ccagtacagc gttgccttgc cttgccgtac tatttgtact
     4681 gtctgcggct tcgtcgcctt gtcctgattt aaatttaatc cactataaat atggatttga
     4741 gcttgtcgga aagcaacaga aaagaaaaca ccgcccattt ttctgggcgg tgtcggaaag
     4801 cgtaattatt tacgcagacc caagcgggta atcaacgcgc gatacgtatc gggctgggta
     4861 cggcgcaagt aggccagcag gcggcggcgt tggctgacca ttttcaacag gccgcgacgg
     4921 ctgtggtggt ctttggggtt ggctttgaag tggggggtca ggtcgttgat gcggaaagtc
     4981 aacagagcga cttgtacttc ggaagagccg gtgtcgcctt ctttgcgttg gaaatcttta
     5041 acgatttgtg ctttttgttc tacggtcagt gccataatga aaactccaaa aatataagaa
     5101 tccccatagg gattcagaca agtttgccaa gcctgaagac aacggcaaac tccctatgcc
     5161 caagatagga caacgtggca ttatgacaca attcccgcat ttctgcacaa tattttaaga
     5221 ccgtggaagt aaccgttaaa aatgccgtct gaagcattgt ctgcttgaga cggcaatgtt
     5281 cagacggcat atgcgcttca aaccacgatt tcttctttct tcttcggttc tttaccgata
     5341 ttgtcgcggc tcaaaccgaa cattagcaga agcgggctgg caaccaatac ggaagaataa
     5401 atgccgaaca cgatgccaat ggtcaacgcc atagaaaagc cgtgcaaggc cgcaccgccg
     5461 aacaccagca tggatacgac catcgcctcg gtcgaaccgt gggtaatgat ggtgcggctc
     5521 atcgttgcgg taatcgcgtt gtcgatgact tccggcacgg catgtccgcg catcgccggc
     5581 ttgcggaagt tttcacggat acggtcgaag acgacgacgg attcgttcac agaatagccc
     5641 aatacggcaa ggatacccgc caagacggtc agcgaaaatt cccattggaa gaaggcaaag
     5701 cagccgagaa taatcacgat gtcgtgcata ttggcgataa tggcagatac ggcaaaacgc
     5761 cattcaaaac gcatcgacag gtaaataatg atgccgataa cgacaaaacc taaagccatc
     5821 aatccattac ttaccaattc ctcaccgact tgcgggccga taaattcgac ttggcgcaag
     5881 gtaacgtcgg gactgtcttt tttcagcaaa tccataacct gattggacaa ctgtgcggaa
     5941 gtaacacctt ctttgttcgg caggcggatc atgatgtgtt tgttcgtacc caatgcctga
     6001 acctgtacat cacctatttt cagcgtatcg aggcgttcgc gcatcttatt gacatccgca
     6061 ccctgctgat attggacttc cattaccgta ccgccggtaa attcgacaga gaaattcaga
     6121 cctctggtaa ccaaaaagaa cacggcagcg ataaacgtaa ccaacgaaat gaaggtcgtc
     6181 agtttgccgt agctcataaa cggaatatcg cgtttgattt taaagagttc catagcttac
     6241 tccttacctg ccgcagtttc ggcttcaggt ttccataccg caccgatgga aatattctgc
     6301 aatttgcgtc tgcgtccgta ccacagattg accaacgcac ggaatacgac gacggaggaa
     6361 tacatcgaag tcagaatacc caaacagtgt acgaccgcaa aaccgcgtac cgggccggaa
     6421 ccgaatacca aaagcgcgat accggcaatc agcgaagtca ggttggaatc gacaatggtc
     6481 gcccatgcgt gttggaaacc gagattgatt gcctgctgcg gcggcacgcc ggcacgcaat
     6541 tcttcgcgga tacgttcgtt aatcaagacg ttggagtcga ttgccatacc caaagtcaac
     6601 gccagcgcgg ccatacccgg taacgtcaac gttgcctgca tggcagacaa aataccgatt
     6661 aggaacagta tgttggcact caatgcaatg gtagaaaaga aacccatcag acgatagtaa
     6721 accaccatga atgcagcaac gatggcaaaa ccccataaag tcgaatggaa gcctttttcg
     6781 atgttctcct tacccaaaga cggaccgatg gtacgttctt cgacaatctg catcggcgcg
     6841 gcaagagaac cggcacgcaa cagcaaagac gtatcattgg cttcggctgt cgtcatgctt
     6901 ccggaaattt ccacgcgtcc gccggtaatg gcagtacgga taaccggcgc ggttacaacc
     6961 tcggattttc cttggtcgat caaaaccatc gccatgcgtt tgccgacatt tgcggcagtc
     7021 agttcgccaa aaatgctgcc acccgcgctg tccaagctca gactgacggc aggtgcgccc
     7081 atttggtcga aactcggttg cgcatcgttg atgttgtcgc ccgtcagctc gacctgtttg
     7141 ctgattagca gagtttcggg acgatctccg ccgcttgaaa gcagctcata accgctcggc
     7201 acgttgcctt ccaatgcctc gcgcaacttg gcaggatcgt cctccaccat acgcaattcc
     7261 aaagtcgcgg tacggccgat gatgtctttt gccttggcag tatcctgaac gcccggaagc
     7321 tgcacgacga tacggtcggc accggactgc tggatgacgg gttcggccac gcccaactcg
     7381 ttcacacggt tgtgcagggt agtgatgttc tgtttgaccg catcggaacg cactttattg
     7441 accgcctctt ccgaaagcgt caagacgata ttgctgccgt ctgaattcag cgttgcttca
     7501 ggaaacagct tgcgcaactg cggcagagcc ttttgcacat cacctgcatc ctgcaaaggg
     7561 acggtcaggc tgtttccagc ctgacgcacc gtgccgctgc ggattttttc gcggcgcagt
     7621 tcgcggcgga tgtcgcccga ataacgttca aacgttttct gcatcgccgc tttcatatcg
     7681 acctgcatgg tgaaatgcac gccgccgcgc aagtccaaac ccaaaaacat cggattggct
     7741 ttgattttcg ccatccattc ggggctgtcc gccaacaggt tgagcgcggt aatataccct
     7801 tcgcccaaag tgttttcgat gacgtcgcgc gctttaagct gcgtttcggt gtctttgaaa
     7861 cgcactttca gtgaattgtc cacaacaaac atcccgtcgg tctgaatacc cgcgttttgc
     7921 agcgcggcat ccactttgaa ttgagtctgt tcgttgatga tgatggcttg tcggttggtc
     7981 gatacctgca cggcgggtgt ttcgccgaat aggttgggca gcgaatacac tgcggcaacc
     8041 gcaatcgtga acacaatcag cagatatttc cataaaggat aacggttcat cattgttcct
     8101 taatggttgg aaccccaccc tttcggtggt gtcggaatcg ggctatttca gaagaggcaa
     8161 aaacccttcc cagccaggca agaccggaag gcggcatctt gaatatgccg ccctgcgtgt
     8221 cggaacatgg tcaagccttc ggttggaatt caaaacaaag tgccgcattc gggcttttcc
     8281 gatgcggctt gtcggcacaa atcaatcgac ttttgcagaa atcgcattgc gttccacttc
     8341 gacctcgatt tttgtaccct gtccgatatc cacggtaaaa aactgttcgc cgactctggt
     8401 taccttaccc ttgaaacctg ccgccaagac cactttgtcg ccgactttca aggcggcaag
     8461 cattgcctga tgcgctttga atttcttttg ctgcggacgc atgatcagga agtagaacac
     8521 caccataatc aacactaaag gagcaaattg tgcaacagct tgattcataa tttatccgtt
     8581 ctttctaata tggttgaaaa tcgagagggg tatataataa cataagaccg taaacaatat
     8641 atcgggtttg ccgtccgtac cgaccgtata ccgcagcctg cccgtccaca aacccatgtc
     8701 cttgacccgc ctaatcttga aattctatgc actgttgcgc ctttttttgg gcaaaaacgc
     8761 ccgcaccgca tggatttcgc atcccgcctg tgccgggcac gaacccggcg caaaccatcc
     8821 cgattcgccc gaccgcatcc tctgcatcga gcaggcattg cgccgcgccg gtatttggca
     8881 gcacctccaa accatagagg cggaagaaat cagcgatacg cgcctcgcac ttgtccactc
     8941 gagcaaatat ctgaaccgtt tggaatcttg ccagccccaa aaaggcaaga ttttccgcct
     9001 ggatgacgac actgcaatca gcacaggctc gctgtctgcc gcacgctttg ccgccggttc
     9061 ggcagttcag gcagtcgaca tggtcatgaa ccgcaaagca tggcatgcct tttgcgccgc
     9121 ccgcccgccc ggacaccatg cgggcagcgg caaagccggc ggattctgcc tgctgaacaa
     9181 cgttgccgcc ggcgtcatgc atgccattgc cgaataccgc ctgaaacgca ttgccgtcat
     9241 cgatttcgat gtccactacg gcgacggtac ggcagaaata ttcaaagacg atccgcgcat
     9301 cctgtttttc aacctgtttg aaaccgacct tttccccttc cccgaaaaca acgatatgcc
     9361 cgacggcggc aatatggtgc acctgccctt gccgccggga acgggcagcc gcacattccg
     9421 cgaagccgtc cgcaggcagt ggctgccccg acttgccgca ttcaaacccg aactggtgct
     9481 gctatcggca ggattcgacg cacaccgtct agacgaatcg ggcaggctca acctgcacga
     9541 ggcggatttt gcctggctga cacacaaaat cattcagacg gcatcgggct gccccggcaa
     9601 aatcgtatcc gtactcgaag gcggctacac ccttgaacct ctggcacaat ctgctgccga
     9661 gcatatccgc gtgctggcag ggctgggcaa atccgatgcc gcaaccgcct atcagaaaac
     9721 actggaccca acaaaaaaac ggtttgccaa accgaaaacc ggacaggtgc gccaacctac
     9781 ccaatccgac cgttac
//
LOCUS       DBBZXW010000071         9376 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.071, whole genome shotgun sequence.
ACCESSION   DBBZXW010000071 DBBZXW010000000
VERSION     DBBZXW010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9376
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.071"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..291
                     /locus_tag="ACJJD2_001530"
     CDS             <1..291
                     /locus_tag="ACJJD2_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7580037.1"
                     /translation="DSAENRQHLEEHQLQDGIMRKACRNRPLTETQTKRNRYLSKTRY
                     VVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA"
     gene            476..698
                     /locus_tag="ACJJD2_001531"
                     /pseudo
     CDS             476..698
                     /locus_tag="ACJJD2_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(759..1712)
                     /locus_tag="ACJJD2_001532"
     CDS             complement(759..1712)
                     /locus_tag="ACJJD2_001532"
                     /inference="COORDINATES: protein motif:HMM:NF042780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6716 putative glycosyltransferase"
                     /protein_id="HGG7580038.1"
                     /translation="MHQYYDAVILSVGNGLLKRFFKQNAQLNIASRPLIITLFPGVVF
                     GDQASILSRMGADIVLYNNKHDFRIAEEYKKQYKLSCQNILYGYPIFRHASKGRHGEK
                     IYFIDQVKIPFKKEERIYTLKKLIALAEKYPEKEFTILLRVADKDITVHQDKHSYIEL
                     AKQFQLPSNLTIERKSTAQAFQEMGYCLSYSSTMLFEAECKGIPVGVVADLGFSKSYA
                     NQHFLGSGVLVYFDQIDFTSPKIADPDWLDCYATKKVITTDEFNKLLKQVVPLQHDYQ
                     EYLSAVNSIESTKTIFLRKFKKLIRDPKKFFYDSKWLRKVI"
     gene            2095..3114
                     /gene="galE"
                     /locus_tag="ACJJD2_001533"
     CDS             2095..3114
                     /gene="galE"
                     /locus_tag="ACJJD2_001533"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HGG7580039.1"
                     /translation="MKKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPR
                     LKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNV
                     SGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERI
                     LTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLSV
                     FGDDYPTPDGTGMRDYIHVMDLAEGHVAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRA
                     FEAASGLTIPFEIKPRRAGDLACFYADPSYTKAQIGWQTQRDLSQMMEDSWRWVSNHP
                     NGYDD"
     gene            3230..4297
                     /gene="rfbB"
                     /locus_tag="ACJJD2_001534"
     CDS             3230..4297
                     /gene="rfbB"
                     /locus_tag="ACJJD2_001534"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HGG7580040.1"
                     /translation="MRKILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESL
                     TDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNI
                     VGTFNLLEAARAYRQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE
                     KPAGVARYEDLITFVQDRPGHDVRYAIDTAKISRELGWKPQETFESGLHKTVQWYLDN
                     KTWWQNVLNGSYRLERLGTGK"
     gene            4360..5226
                     /gene="rfbA"
                     /locus_tag="ACJJD2_001535"
     CDS             4360..5226
                     /gene="rfbA"
                     /locus_tag="ACJJD2_001535"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HGG7580041.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPTPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQMHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLSDEKLEELARPMAKN
                     QYGQYLLRLLKK"
     gene            5280..5837
                     /gene="rfbC"
                     /locus_tag="ACJJD2_001536"
     CDS             5280..5837
                     /gene="rfbC"
                     /locus_tag="ACJJD2_001536"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HGG7580042.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDGWFKENIADCSF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFYVLSDTTELTYKCTDYYKPEAEQVLIWNDPAIGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(5881..7899)
                     /locus_tag="ACJJD2_001537"
     CDS             complement(5881..7899)
                     /locus_tag="ACJJD2_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HGG7580043.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDIEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFILGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSI
                     VVISLVLLLVGESGGLMADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(8095..9216)
                     /gene="dnaJ"
                     /locus_tag="ACJJD2_001538"
     CDS             complement(8095..9216)
                     /gene="dnaJ"
                     /locus_tag="ACJJD2_001538"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HGG7580044.1"
                     /translation="MSNQDFYATLGVARTATDEEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYESCDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKAVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLNLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIIVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         2532 a         2430 c         2101 g         2313 t
ORIGIN      
        1 gacagtgcgg aaaaccggca acatctggaa gaacatcagt tgcaggacgg cattatgcgc
       61 aaagcctgcc gcaaccgtcc gctgacggaa acgcaaacca aacgcaaccg gtatttgtcg
      121 aagacccgtt atgtggtcga acaaagcttc ggtacgctgc accgtaaatt ccgctatgcg
      181 cgggcagcct atttcgggct gattaaagtg agtgcgcaaa gccatctgaa ggcgatgtgt
      241 ttgaacctgt tgaaagccgc caacaggcta agtgcgcccg ctgccgccta aaaggtgccc
      301 cggatgcctg attatcgggt atccggggag gattaagggg gtatttgggt aaaattagga
      361 ggtatttggg gcgaaaacag ctgaaaacct gtgtttgggt ttcggctgtc gggagggaaa
      421 ggaattttgc aaaggtctca ggctgcattt ctcaatgtaa aacgcgatat tttcacccat
      481 tattagggat aagtagccag tggtttacac tggctacttt catagttatg aagtactggg
      541 tctgagtgaa ttcaattatt tccgtataaa acacagtaga cattttacta atcggcaaaa
      601 ttatattaga agaattgaga actactgaag tcaggtaaga taccattttg cacaaattta
      661 acggcatccc taaaaagcat tttgggtggt atttaaagga gtacaaaatg gttttaacta
      721 cagtatgctt agaaatctat agccttacgc gctttatatt aaatcacctt tctcaaccat
      781 ttagaatcat aaaaaaactt tttaggatcc ctaattaact ttttaaattt tcttaaaaaa
      841 atagttttag ttgattctat actattcacc gcagataaat attcttggta atcatgttgc
      901 aatggcacaa cctgctttaa tagcttatta aactcatcag ttgtaatcac ctttttagta
      961 gcatagcaat caagccaatc cggatctgct atttttgggg aagtgaaatc tatttgatca
     1021 aaataaacta aaaccccact acctaaaaaa tgctgatttg cataggattt agaaaagcct
     1081 aagtctgcaa caacaccaac agggataccc ttacattcag cttcaaaaag catagtagat
     1141 gaataagata aacaataccc catttcttgg aaggcttgcg cggtactttt tcgctctatt
     1201 gtcaaattac tcggcaactg aaactgcttt gccagctcta tatacgaatg tttatcctga
     1261 tgcacagtaa tatctttatc tgcaaccctt agcaaaatag taaattcttt ctcagggtat
     1321 ttttcagcca aggcaatcaa tttttttaat gtataaattc tttcttcttt tttaaatggg
     1381 attttaactt ggtcaataaa gtaaattttc tctccatgac gaccttttga tgcgtggcga
     1441 aaaattggat aaccataaag tatattttga caacttaatt tatattgttt cttatattcc
     1501 tctgcaattc taaaatcatg cttattatta tataaaacaa tatcagcccc catacgagat
     1561 agaatacttg cctgatcacc gaatactaca cctggaaaca aggtaataat caatggcctt
     1621 gaagcaatat ttaattgcgc attctgctta aagaaccttt ttaacaaccc atttccaacc
     1681 gataaaatta ctgcgtcata atattgatgc atattcttaa taaagtaatc atcaatatga
     1741 aaaaaaaaat tgcttggtct ttatctatcc ctgattctaa taactgtcga tttgaaagaa
     1801 tgttttctcg acttttgtgg atataaatat caatttgagc atcttttatc tcttttgcaa
     1861 cagcatagcc cgagttaagg aacgagtcat aactggcaat tagtaatact tttttcacta
     1921 ttttccctta attctacacc atatgaataa aattatagta ttttacctta gatatcaaat
     1981 atacttaacc aaaaaaatct gaagaaatct actgctactt cagggataat tatttcatta
     2041 agattttaca accattatta tcaatctatc aaagtatttt tagtatttta ttctatgaaa
     2101 aaaattctcg ttaccggcgg caccggtttt atcggctcgc ataccgttgt ttctttgctg
     2161 aaaagcggcc atcaagtcgt gattttggat aacctatgca attccagcat caatatcctg
     2221 ccacgcttga aaacgattac cggccaagag attccgtttt atcaaggcga tatccgcgat
     2281 cgtgagattt tgcgccgtat ttttgcggaa aaccgcattg attcggtgat tcattttgcc
     2341 ggcttgaaag cggtgggtga aagtgtggcc gagccgatga aatattatga taataatgtt
     2401 tccggcagct tggtgttggc ggaagaaatg gcgcgtgccg gcgtatttaa gattgtgttc
     2461 agctcatcgg ctacggttta tggcgatccg ggcaaagtgc cttataccga ggatatgcca
     2521 ctgggcgata ccaccagccc ttacggcaca tcgaaatcaa tggttgagcg cattctcact
     2581 gatattcaaa aagccgatcc gcgctggagc gtgattttgt tgcgttattt caatccgatt
     2641 ggcgcgcacg aaagtggttt gattggcgag cagccaaacg gcatcccgaa taatttgttg
     2701 ccttatatct gccaagtggc ggcaggcaaa ctgccgcagt tgtcggtttt cggcgatgac
     2761 taccctaccc cagacggtac gggtatgcgc gactatatcc atgtaatgga tttggcggaa
     2821 ggccatgtcg cggcaatgaa ggcaaaaggc ggcgttgccg gcgtacattt gttcaacttg
     2881 ggttcggggc gcgcctattc cgttttggaa atcatccgcg catttgaagc ggcttcgggt
     2941 ttaaccattc catttgaaat caaaccacgc cgtgcgggcg atttggcgtg tttctatgct
     3001 gacccttctt atacgaaggc acaaatcggt tggcaaactc agcgtgattt aagccaaatg
     3061 atggaagatt catggcgctg ggtaagtaat catccgaatg gctacgacga ttaagttgac
     3121 ctgatacagg ccgtctgaaa gagatgtttt cagacggcct ctttatctga aaaacacaca
     3181 ttctgtctgc tataatctgt ttatattttt tggctatcct ctgaaattta tgagaaaaat
     3241 ccttgttacc ggcggcgcgg gctttatcgg ttctgccgtt gtccgtcata ttatccgaaa
     3301 cacccaagat tccgtcgtca acctcgacaa actgacctac gcgggcaatc tcgaatcgct
     3361 gaccgacatt gccgataatc cccgctatgc tttcgagcaa gtggacattt gcgaccgcgc
     3421 cgaactcgac cgcgtattcg cacaacaccg gcccgatgcc gtgatgcact tggcggcgga
     3481 aagccatgtc gaccgctcta tcggttcggc aggcgagttt atccaaacca atatcgtcgg
     3541 cacattcaat ctgcttgaag cagcccgcgc ctaccggcaa caaatgccgt ctgaacagca
     3601 cgaagccttc cgtttccacc atatttccac cgatgaagtc tatggcgatt taggcggcac
     3661 ggacgatttg tttaccgaaa ccgcgcccta cgcgccgtcc agcccctact ctgcctctaa
     3721 agcgtccagc gaccacctcg tccgcgcgtg gttgcgtact tacggcttgc cgaccattgt
     3781 aaccaactgc tccaacaact acggtcctta ccattttccg gaaaaactca ttcctttgat
     3841 gattctgaac gcgcttgacg gcaaaccgct gcctgtgtac ggcgacggta tgcaaatccg
     3901 cgactggctg tttgtcgaag accacgcgcg cgcactgtat caggttgtta ccgaaggtgt
     3961 tgtcggcgaa acctacaata tcggcggcca caatgaaaaa gccaatattg aagtcgtcaa
     4021 aaccatctgc gccctgctgg aagaactcgc tcccgaaaaa ccggccggtg tggcgcgtta
     4081 tgaagatttg attactttcg tacaagaccg ccccggccat gacgtacgct acgccattga
     4141 tacagccaaa atcagtaggg aactaggctg gaaaccgcag gaaaccttcg agtccggcct
     4201 ccacaaaacc gtgcaatggt atctggacaa caaaacctgg tggcaaaacg tattgaacgg
     4261 cagctatcgt ttggaacgct taggtacagg caaatagttt tcagacggca tcccgacgca
     4321 atgccgtctg aaaacccatc gcaaaggaag aaagaaaaga tgaaaggcat catactggca
     4381 ggcggcagcg gcacgcgcct ctaccccatc acgcgcggcg tatccaaaca gctcctgccc
     4441 gtgtacgaca aaccgatgat ttattacccc ttgtcggttt tgatgctggc aggaatccgc
     4501 gatattttgg tgattaccgc gcctgaagac aacgcctctt ttaaacgcct gcttggcgac
     4561 ggcagcgatt tcggcatttc catcagttat gccgtgcaac ccactccgga cggcttggca
     4621 caggcattta tcatcggcga agaatttatc ggcaacgaca atgtttgctt ggttttgggc
     4681 gacaatattt tttacggtca gtcgtttacg caaacattga aacaggcggc agcgcaaatg
     4741 cacggcgcaa ccgtgtttgc ttatcaggtc aaaaaccccg aacgtttcgg cgtggttgaa
     4801 tttaacgaaa acttccgcgc cgtttccatc gaagaaaaac cgcaacggcc caaatccgat
     4861 tgggcggtaa ccggcttgta tttctacgac aaccgcgccg tcgagttcgc caaacagctc
     4921 aaaccgtccg cacgcggcga attggaaatt tccgacctca accaaatgta tttggaagac
     4981 ggttcattgt ccgtccaaat attaggacgc ggtttcgcat ggttggacac cggcacgcac
     5041 gaaagcctgc acgaagccgc ttcattcgtc caaaccgtgc aaaatatcca aaacctgcac
     5101 atcgcctgcc tggaagaaat cgcttggcgc aacggttggc tttccgatga aaaactggaa
     5161 gaattggcgc gcccgatggc gaaaaaccaa tacggccaat atttgctgcg cctgttgaaa
     5221 aaataatgtt tgaggccgtc tgaaactttt cagacggcct ttagatgaaa gataaaaaga
     5281 tgaacatcat tgataccgcc attcctgacg taaaactgct tgagccccaa gtcttcggcg
     5341 acgcgcgcgg cttttttatg gaaaccttcc gcgacgggtg gttcaaagaa aatattgccg
     5401 actgttcctt tgttcaggaa aaccactcca aatccggcaa aggcgtattg cgcggcctgc
     5461 actaccaaac cgaaaacaca caaggcaaac tcgtacgcgt agttgtcggc gaagtgttcg
     5521 acgtggccgt cgatatgcgc gaaggttcgc cgactttcgg caaatgggcg ggcgcaaccc
     5581 tgtccgcgca aaaccaatgc cagctttgga tacccgaagg cttcgcgcac gggttttacg
     5641 ttttgagcga cacgaccgaa cttacctaca aatgcacgga ctattacaag cctgaagccg
     5701 aacaggtttt aatatggaac gacccggcaa tcggcatagg ctggccgctt caaaccgcgc
     5761 cgctgctgtc gcccaaagac cttgccggca aaacgtgggc gcaagccgaa aagctccgcc
     5821 ttacactttc ccgataaaaa atgccgtctg aacgtttcag acggcatttt ctccgacagg
     5881 ctacctaccc gccttcagta cgcgctgtgc aaagaaaaac atcccggtaa cgaagaacgc
     5941 caaacccaac caagaagcgg cggcatccca gttttgcaga ttcaacgcga gcggcgcatc
     6001 cgagccgccg ttggtcacgg agaaggcaat aataaacgcc ataatcacac cgatcaggct
     6061 ttcaccgaca atcaggccgg cggagaacaa ggttccgatg cgctcggcgt ttttcagacg
     6121 gccttcacgg ttttccgctt ttttaccgat gatgtgtttc aacaccgccg ccaacaccgc
     6181 gcctgccacg atgggcatat tgacggacgg cggcagataa atacccatac cgaccgcaag
     6241 gacgggcagg gcaagtttgc cgcctgatga ttttttcaac accaaatcgg cggcaatcaa
     6301 caccgcgcca atcgcgatgc cggtaaagat atagacccat tcgaggttgt gggcgaaaat
     6361 gcccgacgcg atggtcgtca tcaaagtcgc ttgaggggct gccaaagcct gcgccgcgtc
     6421 cataccttcg cgcggcattg cgccggtaaa gccgtaggct tcgtaaagca gttccaacac
     6481 gggtgaaata accagcgcac cgacgataca gccgataatc agggcgactt gctgccgcca
     6541 aggcgtggct ttgagcaggt agccggtttt caggtcttgc aggttgtcat tggagatcga
     6601 agccacgcag attactgccg agccgcaaaa taaagtcagt gccagcaaaa atttgcggtt
     6661 tgcctcatcc gccatcaaac cgccggattc gcccaccagc agcaaaacca gcgaaatcac
     6721 gacgatggaa acgatgccca cgccggaaat cgggctggaa gacgagccga ccaaacccgc
     6781 catataaccg caggcggcgg cgaccaaaaa gccgatgacg gaagccaaaa gcgtgcaaac
     6841 gaccaccaaa agccaagcca tgccgcccgt aatgtgcgaa tcgccgataa agtggtaaaa
     6901 cgacacgcct agaataaaca tcatagacaa tacccagaaa atcatggctt taggcgacaa
     6961 atcctgttca gcgcgttctg tagcgggcgc accgccgcca aaactcttga acgacatctt
     7021 catgccttcc accattggct tgagcagcat caaaagcgtc caaaccgccg cgatacctat
     7081 ggttcccgcg ccgatgaagc gtactttttc cttccacagc ttcatcgcaa acgccgccat
     7141 ttctatatcg gaaggctgcg ggatgtgcga tgaaaaatac ggcacggcaa tgccccaagc
     7201 aatcgaaatg cccaacagaa tggcgatacc gcccgtcagt ccgaccaaat agcccgcgcc
     7261 caacaatgcc agtgaaaagc ccatcggcag ttggaaaatt gccgtaccgc ttttaaacca
     7321 ataactcgcg ctatcggcaa tcacacgcag acctccggcg caaaagctca tcaatcccgc
     7381 caacgcaccg ccggccgcca gctctttgat gccgctgccg ccctgacggt tatccccttc
     7441 ttcatgaccg cccactttca aaatttcagc agccgccaca ccttccggat aaggcaaatc
     7501 gcttttcacc accatcgcgt aacgcagcgg aatggtgaaa atcaccccca aaatcccgcc
     7561 ggcaatacat aaaagcgtcg tctgccagaa cgggaaaccg ctccagtagc ccgccatcag
     7621 caaaccgggc aggacgaaga tgatggttga aagcgtaccc gcagccgagg cttgggtctg
     7681 caccatgttg ttttccaaaa tattgctgcc tttgaaaaac tttaaaaccg ccatcgaaat
     7741 caccgccgcc ggaatcgacg aggcaaaggt cagcccgact ttcaaaccga ggtaaacgtt
     7801 ggacgcagta aaaattacag tgatcaatgc accgagtatc atgcctcgga gcgtcagttc
     7861 gcggtattct tctaccgaac cggataaaga tttattcatt attcttcctt tgacaacaga
     7921 ttcccgcata ttgttggcaa tatgtcataa tgtcaagttt taaaaagaac agttaaaaac
     7981 agttatccaa tcctatctcg tactcccttg aaaataaaaa ctattttcaa gcaaacaaaa
     8041 acagtcgtat cagggagatt ccccgatacg gccgcctgtt tacaagcctc aaaatcaatc
     8101 aaacaaatcg cgcagcttgt ctaaaaacga tttcttacgc ggtgtttgat tttccaaccc
     8161 ggtagaaatc cgttcaaatt cttctaaaag ctctttttga cggtcggtca aattaacagg
     8221 tgtttcgacg ataatatggc agtacaaatc gccggtcgcg ctgctgcgta aagatttgac
     8281 tcccttaccc ttcacgcgca tcctcctgcc ggtttgggtt tctttgggga cggtgagctt
     8341 gactttgccg tccaaggtcg gcacttccaa ctctccgccc agagccgccg tggcaaaact
     8401 gatcggcagt tcgcaatgca aattcaagcc gtcgcgttgg aaaatcttat gcgcccggat
     8461 gcggacggtt acatacaaat cgcctgcggg cgcgccgtgc atacccggcc cgccttcgcc
     8521 gctcaaacgg atacgctgcc cgtcatcgat accggcggga atattgactt ccaccgcctt
     8581 gacggcctta ttccgccccg cgccacggca tttgacgcaa ggttctttaa tgtgtttgcc
     8641 ggcaccgtgg caggtcggac aagtctgctg catacggaaa atcgcctgct ggatatgcac
     8701 cgttcccgaa cctttgcaag tcgggcaggt ttccggggat gtccccggtt tcgcaccgct
     8761 gccgttgcag acatcgcacg attcataagt cggaatgttg atgcgtttct tcacgccttt
     8821 tgctgcttct tcaagcgtga tttcgatacc gacttgaacg tcctcgccct gataatcagg
     8881 ctgggcgcgc cccgaaccgc ctccaaacat ttggctgaaa atatccccaa agtcaaaacc
     8941 ttgagcaccg ccgaatcctc caaaccctcc gaagcccccc tgtccgccgc cttcaaacgc
     9001 cgcatggcca tactggtcgt acatagcgcg cttttcttta tcggacaaag tttcatacgc
     9061 cttttgtact tctttaaact tctcttccgc ctctttattg tcaggattgc ggtcgggatg
     9121 gtatttcatc gccaatttac ggtaggcttt tttaatttct tcatcggtag ctgttcttgc
     9181 cacacctagg gtggcataaa aatcttgatt gctcatcttt tcatctgatt caaaataaaa
     9241 tcgtcgataa aataagggca acaggacaaa acacaaggtt tcccgaacaa aaaccgcctt
     9301 tcagacggca tttcttctgt tgttccttta acaatgcgcc gggtatcggc ggctttaccc
     9361 gtccggaaat tgaaaa
//
LOCUS       DBBZXW010000072         9277 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.072, whole genome shotgun sequence.
ACCESSION   DBBZXW010000072 DBBZXW010000000
VERSION     DBBZXW010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9277
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.072"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            43..675
                     /locus_tag="ACJJD2_001539"
     CDS             43..675
                     /locus_tag="ACJJD2_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HGG7580045.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="ACJJD2_001540"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="ACJJD2_001540"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HGG7580046.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQVQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGSLEIPVEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2197..4065
                     /locus_tag="ACJJD2_001541"
     CDS             2197..4065
                     /locus_tag="ACJJD2_001541"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HGG7580047.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVEFSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLIKDIPNV
                     HWVDAQKYLPKNTVEIYGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRDGALQ"
     gene            complement(4160..4773)
                     /locus_tag="ACJJD2_001542"
                     /pseudo
     CDS             complement(4160..4773)
                     /locus_tag="ACJJD2_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
     gene            complement(4810..6960)
                     /gene="dinG"
                     /locus_tag="ACJJD2_001543"
     CDS             complement(4810..6960)
                     /gene="dinG"
                     /locus_tag="ACJJD2_001543"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HGG7580048.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELSFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGEFGIFIVRIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            7117..7287
                     /locus_tag="ACJJD2_001544"
     CDS             7117..7287
                     /locus_tag="ACJJD2_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580049.1"
                     /translation="MLLYRLLGGAEIECGRCPVPPMTDWQHFLPAMGTVSAWVAVIWA
                     YLIIESEKNGRY"
     gene            complement(7355..8656)
                     /locus_tag="ACJJD2_001545"
     CDS             complement(7355..8656)
                     /locus_tag="ACJJD2_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HGG7580050.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(8646..>9277)
                     /locus_tag="ACJJD2_001546"
     CDS             complement(8646..>9277)
                     /locus_tag="ACJJD2_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="substrate binding domain-containing protein"
                     /protein_id="HGG7580051.1"
                     /translation="RVTMPLWFAGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEG
                     VDLALRVSQTLSPSLIARPLAEIEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTN
                     QQKLDLTRKSDGKKYRLELTPVIRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTL
                     VRLLPGYAVPTDRLNAVYADRAFLSAKVRSFIDFLNEKIASRKGCRNAV"
BASE COUNT         1881 a         2402 c         2792 g         2202 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 atggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaagcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gccgaccact ttgggcaaag aaaccgccaa cgtcgtttac cgcctgcaac
     1321 gccagtttaa aaacctgcaa gtgcaagagt tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtt gcttatcccg atgtggattg ggaaacccac tgccgcaact
     1441 ttgtcgaaat cagcctcggt ctgaccttca acccctacac catccaaatc gaaccgcacg
     1501 actatatggc ggaattcttc caaaccctca gccgcatcaa cacgattctc atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggttc ttccaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgaag
     1681 gaaacctcgg tatggcaaac gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gttggcagcg cgacctgacc gacagcaccg tcttacgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcacacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgccgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat tacgcccgaa gtgctgaaag gctttatcgg atcgctggaa atccccgtcg
     2041 aagccaaagc aaaattgctt gagctgaccc ccgcactgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacggggcg atatttatgc aagctgtccg atacaggcct
     2221 gaaattgacg gattgcgggc cgttgccgtg ctatccgtca ttattttcca cctgaataac
     2281 cgctggctgc ccggagggtt tttgggggtg gacattttct ttgtcatctc gggattcctc
     2341 attaccggca tcattctttc tgaaatacag aacggttctt tttctttccg ggatttttat
     2401 acccgcagga ttaagcggat ttaccctgcc tttattgcgg ccgtgtcgct ggcttcggtg
     2461 attgcctctc aaatcttcct ttacgaagat ttcaaccaaa tgcggaaaac cgtggagttt
     2521 tctgcggttt tcttgtccaa tatttatctg gggtttcagc aggggtattt cgatttgagt
     2581 gccgacgaga accccgtact gcatatctgg tctttggcag tagaggaaca gtattacctc
     2641 ctgtatcctc ttttgctgat attttgctgc aaaaaaacaa aatcgctacg ggtgctgcgt
     2701 aacatcagca tcatcctatt tctgattttg actgccacat cgtttttgcc aagcgggttt
     2761 tataccgata ttctcaacca acccaatact tattaccttt cgacactgag gtttcccgag
     2821 ctgttggcag gttcgctgct ggcggtttac gggcaaacgc aaaacggcag acggcaaaca
     2881 gcaaatggaa aacggcagtt gctttcatca ctctgcttcg gcgcattgct tgcctgcctg
     2941 ttcgtgattg acaaacacaa tccgtttatc ccgggaatga ccctgctcct tccctgcctg
     3001 ctgacggcgc tgcttatccg gagtatgcaa tacgggacac ttccgacccg catcctgtcg
     3061 gcaagcccca tcgtatttgt cggcaaaatc tcttattccc tatacctgta ccattggatt
     3121 tttattgctt tcgcccatta cattacaggc gacaaacagc tcggactgcc tgccgtatcg
     3181 gcggttgccg cgttgacggc cggattttcc ctgttgagtt attatttgat tgaacagccg
     3241 cttagaaaac ggaagatgac cttcaaaaag gcatttttct gcctctatct cgccccgtcc
     3301 ctgatacttg tcggttacaa cctgtacgca agggggatat tgaaacagga acacctccgc
     3361 ccgttgcccg gcgcgcccct tgctgcggaa aatcattttc cggaaaccgt cctgaccctc
     3421 ggcgactcgc acgccggaca cctgcggggg tttctggatt atgtcggcag ccgggaaggg
     3481 tggaaagcca aaatcctgtc cctcgattcg gagtgtttgg tttgggtaga tgagaagctg
     3541 gcagacaacc cgttatgtcg aaaataccgg gatgaagttg aaaaagccga agccgttttc
     3601 attgcccaat tctatgattt gaggatgggc ggccagcccg tgccgagatt tgaagcgcaa
     3661 tccttcctaa tacccgggtt ccaagcccga ttcagggaaa ccgtcaaaag gatagccgcc
     3721 gtcaaacccg tctatgtttt tgcaaacaac acatcaatca gccgttcgcc cctgagggag
     3781 gaaaaattga aaagatttgc cgcaaaccaa tatctccgcc ccattcaggc tatgggcgac
     3841 atcggcaaga gcaatcaggc ggtctttgat ttgattaaag atattcccaa tgtgcattgg
     3901 gtggacgcac aaaaatacct gcccaaaaac acggtcgaaa tatacggccg ctatctttac
     3961 ggcgaccaag accacctgac ctatttcggt tcttattata tggggcggga atttcacaaa
     4021 cacgaacgcc tgcttaaatc ttctcgcgac ggcgcattgc agtagcctgc cttgccgtcc
     4081 gatatcgttt gtgccgccgt ttgcctttcg gggcggcggc ggtttttatt ttccttcccc
     4141 tgcgggaggg aattttgaat caaaacccca attgcctttc caagttttcc accagattgt
     4201 catccagttc caaagcctgc gacaggcggg cgaggaagac ggtttctttc cgcgacaaat
     4261 cggcacatac cagtcttgcc gccagatagg cctccgccgc caacgcctca tcgttgccga
     4321 cggcggcggc gatgtcttcg atgcttgcgg gcaggcggta ttcggcggcg agccatgcag
     4381 cagtttcggg gtctgtgccg ctttcctgtt cgatagtccg gcgttcggct tcgtctatca
     4441 tgccgtctga agcggcggtg gctatcatgg tgcgcaatac ggtgcggctg tatgtttctt
     4501 cggtttctcc ggcaggttgg aaatcgcttt gtgttacggt tgcccgccct ttgttttgct
     4561 gccacatctg atagccccgg taggcgaggt agcccaaagc ggcggtcgaa ccgattttgg
     4621 tgatggtttt gcggttttta ccgttcagca gcatggaggc gacaccggca accagcgcgc
     4681 ctccgccgaa tgaattgagc gggctgtcgg agaatgtgtt gccttttttt gaaccgtgct
     4741 taagacttgg ttgagcagtc gggtaaagtt catgaatttt tcctttctgt tgcgggaagg
     4801 gcggtatgtt taccctatcc ttttaaacgg cggcaggccg gccaataatt gttggccgta
     4861 ccgctgtgtt ttgatgcggt tgtcgaggat ggttacgcgg ccgtagtctt gttcggtgcg
     4921 gatgaggcgg ccgacggcct ggatgagttt gatgccggct tcggggacgg tgatttcaat
     4981 aaaaggattg ccgccgcgct gttctatcca gcggttttgg gttttttcga tggggttgtc
     5041 aggcatcgca aacggcagct tggcgatgat gacttgcacg caggcggtgc cgggcaggtc
     5101 gagtccttcg gcgaaactgt cgagtccgaa gatgatgctg gctttgcctt cttctatggc
     5161 ccggtggtgt ttttgcagga ggacggcttt gggtaattcg ccttgtacga gcaagagcgg
     5221 caggtagtct ccgggcaggc gcagggcgac atcctgcatt tgtttgcgcg aggaaaacaa
     5281 gacgagcgtg ccgatggctt cggtgggcga aataagcttg ggcagccatt cgatgacggc
     5341 ggcggtgtgg gcttcggggt ctttggggct ggcgtatatg ggggggatgt agagttcgcc
     5401 ctgtttttca aagtcaaagg ggcttttgag ggcgagggtg gtggtttcgg gcagccattg
     5461 cagcccggtt tggcgcagca tcaggttgaa gttgcccaag gattgcaggg tggcggaagt
     5521 caataccgcg cctgccgcac gccgccacag gctgttggca aggtgggatg cgctgctgat
     5581 ggggctggcg ttgaaaatgt agtcgttttt gtcgtcggca cggcgggtta tccattttgc
     5641 cagcggctct tcgccttcga gggggacggt ggagagcaaa tcccaaaccg cgctgatttg
     5701 ttcgatacgg acgatgaaga tgccgaactc gccggtcagg cggtcgagga gcgcgccgtc
     5761 ctgttctttt tcgcggcgcg cggcggaaag cgcatcgttc agcccgacaa cgtgtttgag
     5821 caggctgcgc gcagcaatgg ccgtattgga aacggtggtt tcgaggcctt cggggatttt
     5881 gccgtcttcc cacagccaag tcggttcgct gttggttcgt ctgtcgtttt cagacggccc
     5941 catacttaaa gacggctctt ccgccaaatg gaactgccat tcgtgcaggc tgtcgagcaa
     6001 ggatgcggcg gcttcgtcgg ccaggttggc aagttcggct ttatcggtaa gcgcggcaat
     6061 tttgccggtc agctgcggca gtttttccag cgtccaaacg gcaatattcc atgaatgttc
     6121 ggcggcaaaa cggctgaggg cttttttggg caggtggtgc gcttcgtcta tgcaatagaa
     6181 actgttttcg ggcgcaggca gaatcacgcc gccgcccata ctgatgtcgg caagcagaag
     6241 atcgtggttg gcaacgacga catcgacggt ttccaagaca tcgcgtgcta ggtaaaacgg
     6301 acattccgga cggttgggac aggcggtttt caggcagccg tggcggtcgt tggtcacttt
     6361 gagccaaatc gcgtcatcga ttttttccgg ccaagtgtcg cggtcgccgt tgaaccgtcg
     6421 ggcggaaaat tcgtcggcga tgtcgcgcag cagcttcaat tcttcgggct tgggtttgct
     6481 gtcccacaag acggcggggg cttcaaagcc gagcaggttt tgctgggcat tgctttgcgt
     6541 cagttgatag agtttgtagg ggcagagata gcggccgcgc cctttggcaa gcgcgaagct
     6601 cagttccaaa ccgctttttt cgaccaaaaa cggcaggtcg cggtctacca actgctcctg
     6661 caaggcaacc gttgcgctgc tcacaatcag ccgcttgccg cgcgtctgcg ccatgatgcc
     6721 gcccgccagc aggtaggcaa gcgatttgcc cacgccggtc ggcccttcga ttacggcgat
     6781 gctctcgccc tcgcgcttgg gcggctcgcc gccttcttcg cgcgccaacg tccgcgaaaa
     6841 agcgttggca accgccgcaa tcatttcccg ctgcgaagcg cgcggacgga aaccgggcag
     6901 gtttttgccg atgttttggt aatggtcgcg gatggcgttt ttttctaaat cggtgagcat
     6961 ggcgttttgt acggcggtag aagtgggctt attttaacat tgcacggaag cggtacaata
     7021 tcgttgtcgg aatggggggt gaggtgaatc gtgcggacgt ggttggtttt ttggttgcag
     7081 cgtttgaaat acccgttgtt gctttggatt gcggatatgt tgctgtaccg gttgttgggc
     7141 ggcgcggaaa tcgaatgcgg ccgttgccct gtgccgccga tgacggattg gcagcatttt
     7201 ttgccggcga tgggaacggt gtcggcttgg gtggcggtga tttgggcata tctgattatt
     7261 gaaagtgaaa aaaacggaag atattgagtc atccggacgc aatgccgtct gaaacggaag
     7321 ttcagacggc atttgtttta ggttgccgta ccgcttaggg aataccggcg acaggatagg
     7381 cgggatagcc gtgggtatcg accgaacagg caaaccgcca aggcgtgtgg acggtgtcgg
     7441 cggacaggtg ggcgagttcg ggaatgtgcc gtttgataaa agtaccgtcc gggtcggtac
     7501 ggtatgaggc ggcggcaatg tcggggcagg tgtgccgtga ggcggcaagc caccagttgc
     7561 cttggttgat tgccgcatcg aaatcggtca gctgtcgggc aaaccatatc tcgccttcgc
     7621 ggcgggggag gtttaaaacg tggcagaaaa aatccgcgct caagcgtctc agggcggggt
     7681 ggaggctgcc ggttttgtgc aaacagcgca tcgcggcatc gataatcgga atgccggtct
     7741 ggccctgctg ccaaagcgtc aggcgcaggg tgtgttcagg attgccgtct gaagggtcgt
     7801 catccgtgtg ctgcaaggca agttgaagga aaaaatcgcg gcggatgatg ttgtccgccc
     7861 acgcgttcag acggcgttcg aggctttccc gcgcgagcag gcgcggcgag atgcagccgg
     7921 cactcaaata cgcgcccatc agcgaagtgt gtttgcgcga ggggaaatcc tttaaaacgg
     7981 agtaggaatc cgcctgttcg agaaaccgcc gccactgccg ccaagccgcc gtttcgccgc
     8041 tgttttgcgg caggaagatg ccgtctgaaa gggcggcagg cggcggggcg gaaaggtttt
     8101 cggggaaggg ttggcggtat gccgcgaata ggtccggacc ggcggggggc tgcttggaaa
     8161 agcggtcgag ccatacttcg cggtagcggt cgaaatcggt gtgtgccgtg ccgccgtcgg
     8221 gtatcaggtc ggttttgccg aaaacggcgc ggtcattgac gaaggttaac gcgatgccgt
     8281 gtttgtccaa ttcatgccaa agggcgttgt cggcgagttt gtcggcaaaa gtatgggatt
     8341 cgtcggcgat gacggcgcgg atattgaggc ggacggcgag ccggacgagc tcggcaggcg
     8401 atgccgccgt gtagagcggg atgccgcgcc ctgcaagccc ttgggcgagt tcggcggcgg
     8461 attggcggta gaacgcggcg cggcgagggt tgtctgtttc ggcatcgtca atccaaatac
     8521 cgataacggg caaaccttcg gcaacggcgg tgcataaggc ggcgttgtcg cggatgcgga
     8581 ggttttggcg gaaccagacg agcgtgtgtg cggcgcacgt gtccgcataa agggggcggg
     8641 cggtttcaga cggcatttcg gcagcctttc ctgctggcga ttttttcgtt cagaaaatcg
     8701 atgaagctgc ggactttcgc gcttaagaat gccctgtctg cataaacggc attcagccgg
     8761 tcggtcggga cggcgtatcc gggcagcagc ctcaccagcg tgccgcagcg caaatcgtgt
     8821 tccgccgccc aaagcggctg ataaccgatg cacgcgcccg ccttaatcat ttcgcgcatc
     8881 atcagcgtgt tgtcggtacg gatgacgggg gtcagttcaa gccggtattt tttgccgtcc
     8941 gatttgcggg tgaggtcgag tttctgctgg ttggtgtagg tcggcaggac ggcgggcagc
     9001 cccgccactt cttccggcgt ttccggcacg ccgttgcgcc tcaggaagtc gggcgaggca
     9061 agcagggcaa attcgatttc cgccagtggg cgcgcaatca gtgacgggga cagggtttgg
     9121 gaaacgcgca acgccaaatc cacgccttcg gcaatcaaat cgacgtggcg gttgtccaaa
     9181 atcagttcta atgtcacttc gggataacgt tcgcggtatt ccgccagcca gttgcatatc
     9241 tggctgccgg caaaccacag tggcatcgtt acgcgca
//
LOCUS       DBBZXW010000073         9008 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.073, whole genome shotgun sequence.
ACCESSION   DBBZXW010000073 DBBZXW010000000
VERSION     DBBZXW010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9008
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.073"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..556
                     /locus_tag="ACJJD2_001547"
     CDS             <1..556
                     /locus_tag="ACJJD2_001547"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7580052.1"
                     /translation="TKKECAVLGTLSRLDTVRAVHLMLDILKKMVDRGMPVRLNVAGI
                     GEEMDNLKAQAKRLGIEDKVTFLGGVRDLTGYFKEVDILVNTPHCVGDHGAGVGNNIL
                     EAGLYDTPVVTYNMAGISEMVITGQTGYCIPFGDDEAFIEAVDTLIKHPELRSQMGKA
                     LHKHVETLCSDDEIYRTTMAAYEM"
     gene            570..1742
                     /locus_tag="ACJJD2_001548"
     CDS             570..1742
                     /locus_tag="ACJJD2_001548"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7580053.1"
                     /translation="MNITIVAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHY
                     DKSFRRPEDAEAASQGRLKVMLLEESGYSKNVSLGRVTSHHRFVKHFEKWLENCRPGE
                     QDVVFSAYPLIATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHKLLPFA
                     SRANRAYRYADALVAVSQTYLDRAKETNPNVPGEVIYIGADFPKLDAAPAKDFGDDKT
                     RFFYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLDRLKQYACDGIKFYGY
                     IPYAEMMSVAKGCDIAINAIQSYSMASITNKLSDYMALQKPILNSQVNDEVAEVLTLL
                     PHANYRSGDVDGFVQAAKDILKRKSDPVQSDEIVRRFKRDVAYQKIVNLIERLAHE"
     gene            1735..2262
                     /locus_tag="ACJJD2_001549"
                     /pseudo
     CDS             1735..2262
                     /locus_tag="ACJJD2_001549"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
     gene            2311..3312
                     /locus_tag="ACJJD2_001550"
     CDS             2311..3312
                     /locus_tag="ACJJD2_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HGG7580054.1"
                     /translation="MPYFTGNQTNEKNNILILSAGRRVELVQDFQTEAARFSDGISVF
                     ATDLNPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLAD
                     ERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPY
                     DGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAI
                     PRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEI
                     NPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND"
     gene            3299..3985
                     /locus_tag="ACJJD2_001551"
     CDS             3299..3985
                     /locus_tag="ACJJD2_001551"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7580055.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDGKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSLQ
                     DLVPIIDSNT"
     gene            complement(4250..4414)
                     /locus_tag="ACJJD2_001552"
     CDS             complement(4250..4414)
                     /locus_tag="ACJJD2_001552"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580056.1"
                     /translation="MPSEGGVFRGIGRAPQVLSKSVCTGVHSGLNLNQYGVASPCRTI
                     CTVCGFVALS"
     gene            4455..5630
                     /locus_tag="ACJJD2_001553"
     CDS             4455..5630
                     /locus_tag="ACJJD2_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HGG7580057.1"
                     /translation="MLNTSLSPWPCFTQEEADAVSKVLLSNKVNYWTGSECREFEKEF
                     AAFAGTRYAVALSNGTLALDAALKAIGIGEGDDVVVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAIIVVHLAGMPAEMDDIMALAKEHDLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAVIGRIQLKRMPEWTARRRENAAKLAESLG
                     KFKSIRLIEVAGYIEHAQYKFYAFVKPEHLKDGWTRDRIVSELNARKVPCYQGSCSEV
                     YLEKAFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKKHIEAVLTEAAR"
     gene            5678..7588
                     /gene="pglD"
                     /locus_tag="ACJJD2_001554"
     CDS             5678..7588
                     /gene="pglD"
                     /locus_tag="ACJJD2_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HGG7580058.1"
                     /translation="MTLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTALLTIGLFVRMGLYRAVTRFISFRILSTALAGSIVSAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDDPKLWRTVICGLAVYRPDDIAALIGRYGVEKILLAIPGATQEQ
                     RRRIISKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDPVTPDDRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAIEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPDITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADEAMLPWHELSVLLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDL
                     LWVRETHRKNAV"
     gene            7644..8936
                     /locus_tag="ACJJD2_001555"
     CDS             7644..8936
                     /locus_tag="ACJJD2_001555"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HGG7580059.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSAKPK
                     IENVEHEGEAGFFKYRVNFDALENLPELKEGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAQKHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEILKAEGTLIIPGEHFFIGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
BASE COUNT         2252 a         2711 c         2175 g         1870 t
ORIGIN      
        1 aaccaaaaaa gaatgcgccg tactcggcac actttcccgt ttggacaccg tccgcgccgt
       61 gcatctgatg ttggatattt tgaagaaaat ggttgaccgc ggtatgcctg tacgcctcaa
      121 cgttgcaggt atcggcgaag aaatggacaa cctcaaagcc caagccaaac gtttgggcat
      181 tgaagacaaa gtcaccttcc tcggcggcgt ccgcgatttg accggctact tcaaagaagt
      241 cgatattttg gtgaacacgc cgcattgcgt gggcgatcac ggcgcaggtg tcggcaacaa
      301 tattttggaa gccggccttt acgacacgcc tgtcgtgacc tacaacatgg cgggcatttc
      361 cgaaatggtc attaccggcc aaaccggcta ctgcattcct ttcggcgacg acgaagcatt
      421 tatcgaagcc gtcgatacac tcatcaagca tccagagttg cgcagccaaa tgggcaaagc
      481 cctgcacaaa catgtcgaaa ccttatgctc cgacgacgaa atctaccgca ccaccatggc
      541 tgcgtacgaa atgtaaggcc gtctgaaaca tgaacattac catcgtcgcc ccttattgct
      601 cgctgccgtc cgagccgcat ttcaaccgct tctggtatct tgccgagctg ttgtcgcagt
      661 cgcatgacgt gttgctgatt accagcaact tcaagcacta cgacaaatct ttcagacggc
      721 ccgaagatgc cgaggccgcc tcacaaggcc gtctgaaagt catgctgttg gaagaaagcg
      781 gatacagcaa aaacgtgtct ttaggacgcg tgaccagcca tcaccgcttc gtcaaacatt
      841 ttgaaaaatg gttggaaaac tgccgtccgg gcgaacaaga cgtcgtcttt tccgcctatc
      901 cgctgattgc caccaacctg ctgttgggca aacacaaagc gcgtttgggt tacaaactga
      961 ttgtcgatgt gcaggacgta tggccggagt ctttctcctc ggtcgtaccg tttttgaaaa
     1021 aagtaccgca caagctgctg ccctttgctt cacgcgccaa ccgggcctac cgctacgccg
     1081 acgcgctggt tgccgtatcg cagacttatc tcgaccgcgc caaagaaacc aatccgaacg
     1141 tacccggcga agtcatctat attggtgctg actttcccaa actcgatgcc gcacctgcca
     1201 aagattttgg cgacgacaaa acccgctttt tctacttggg cacgctcagt tacagctatg
     1261 acgtggaaac cgtgtgcaaa ggcgttcgga aacttttgga cgacggcgaa aatgtagagc
     1321 tgcacatcat gggcggcggc cccgatttgg acaggctcaa acaatatgcc tgcgacggca
     1381 tcaagtttta cggctacatt ccttacgccg aaatgatgtc ggtcgccaag ggctgcgaca
     1441 ttgccatcaa cgccatccag tcctattcaa tggcatcgat taccaacaaa ctctccgact
     1501 atatggcttt gcaaaaaccg attctgaaca gccaggtcaa cgacgaagtt gccgaagtcc
     1561 ttaccctgct accgcatgcg aactaccgtt ccggtgatgt ggacggtttc gttcaagccg
     1621 ccaaagatat tttgaagcgc aaaagcgatc ctgttcagtc cgacgaaatc gtccgccgct
     1681 tcaaacgcga tgtggcgtat cagaaaatcg tcaacctgat tgaaagatta gctcatgaat
     1741 aaatttttca aacgcctgtt cgacatcatc gcctccgcat cggggctgat tgtcctctca
     1801 cccgttttcc tgattttggc gtacctcatc cgcaagaatc taggttcgcc cgtcttcttc
     1861 attcaagaac gccccggaaa ggacggaaaa ccttttaaaa tggtcaaatt ccgttccatg
     1921 cgcgacgcgc ttgattcaga cggcattccg ctgcccgaca gcgagcggct cacacccttc
     1981 ggcaaaaaac tgcgtgccgc tagtttggac gaactgcctg aattatggaa tgtcttaaaa
     2041 ggcgacatga gcctggtcgg cccgcgcccg cttttgacgg gctacctgcc gctttataac
     2101 gacttccaaa accgccgcca cgaaatgaaa ccgggcatta ccggctgggc gcaggtcaac
     2161 gggcgcaacg cgctttcgtg ggacgaaaag ttcgcctgcg atgtttggta caccgacaac
     2221 ttcagctttt ggctggatat gaaaatcctg tttttgacag tcaaaaaagt cttgatcaaa
     2281 gaaggcattt cggcggaagg ggaagccact atgccttatt tcactggaaa tcaaactaat
     2341 gaaaaaaata atatactgat tctgtcggca ggtcgccgtg tcgaattggt gcaggacttc
     2401 caaaccgaag ccgcacgttt ttcagacggc atcagcgttt ttgccactga cctcaacccc
     2461 cgcatgtctt ctgcctgcca tgtttcggac ggttcatttg aagtgccgcc gattagtgcc
     2521 gattcatata tcgacagcat tttcaatctg gcggtacgcg aaaatatcgg tttaatcatc
     2581 ccaaccatag acaccgaact gcaaaagctg gcagacgagc gcgaacgctt tgaagcggca
     2641 agtgtccaca tcgtcgtttc cgattcggac ttcatcgcac aatgccgcga caaacggaaa
     2701 accgccacct tgtttgcccg ctacggcata cgctcacccg aaatttacga ccgcaagaag
     2761 ttggttttcc cttgcttcgc caagccttat gacggcagcc gcgccatcgg tgcaaaacgg
     2821 attgacacac ctgccgacct gacaccggaa gtcttggcag acaccaaatt aatgttctgt
     2881 cagtttatcg acatcgaaaa taaattttcc gagtttaccg tcgatatgta ttacgaccgt
     2941 caatgccgtc tgaaatgcgc catcccgcga aaacgcttgg aagtgcgctc cggcgaaatc
     3001 agcaaaggcg ttacctgcaa aaacagcctc taccaaacgc tgctggaaaa aatgtcggta
     3061 ttgcagggcg cgcgcggctg tatcacggcg cagttcttct acaacgaaga aaccggcgaa
     3121 ttctacggcg tggaaatcaa cccccgcttc ggcggtggct tcccgctgac gtatgccgca
     3181 ggcggcaatt atccgagccg gttgatgcgc gaatacctcg gcgacgaaga aatcccgttt
     3241 tcagacgact gggaaaacaa cctcattatg ttgcgctacg atgccaaggt cttggttcat
     3301 gaaaacgatt aatcctgaaa ccaccgtcat cgtcttcgac ttggacgata ccctgtattc
     3361 ggaatacgaa tacaagctct ccggtatccg ttcggtcatc gataccgttg ccgcactgta
     3421 tcccgattgg aattcagaca acctatggcg caacatcgac cccgacggca aagattggct
     3481 ggacaaattg tgccgccact gtggttttaa tgaatcggaa aaacaggttc ttttgtggca
     3541 ataccggctg caccgcccga cgctgactcc gtatgctccg ccggatttcc tgtccgaact
     3601 gaccgcgccc ttcgccgcac gcgcgctgat taccgacggc agaagcctga cccaacgcct
     3661 gaagctggaa gccttgggtc tgtcttccct gtttgacgac atcctcatct ctgaagcctg
     3721 ctcttcggaa aagcccgacg gcaaacgctt ccgccatctt caagacaaat atgccgacaa
     3781 ggcaggctgc ttcatctata tcggcgacaa catttccaaa gactttatcg cgccgaacac
     3841 tttgggctgg ataaccatag gattgcttcc ctccggacag aacatccacc gccaccagcc
     3901 tgaaagtttt aacacagaat atcatcccga cttttgggtt aactcccttc aagatttagt
     3961 tcctataatt gattcaaata cttaaccatt acataatcaa acatgcactc acaatattaa
     4021 aaggactatt tcatgacaaa atattattca tggggcgtaa acggctttcc gccctacgtt
     4081 ttcgacacca tttggaaacg atggaagttg aatgggcgcg ggggcggtta tcgtgtgcga
     4141 catcccggac ggcatgaccg tcgcgggcaa tccggcaaag ccgctgccgc gcaaaaaccc
     4201 caagaccggg acggcataag cgattaaaat atagtggatt aaatttaaat caggacaagg
     4261 cgacgaagcc gcagacagta caaatagtac ggcaaggcga ggcaacgccg tactggttta
     4321 aatttaatcc actatgcacc cccgtacaga ccgattttga caacacctgc ggcgcgcgcc
     4381 cgattcctcg aaacacgccc ccttcagacg gcatagggtc ggaaatgccg tctgaacccg
     4441 acggacaaac catcatgttg aacacttccc tttccccgtg gccctgcttc acccaagaag
     4501 aagccgatgc cgtttccaaa gtcctcttgt ccaacaaagt caattactgg acgggcagcg
     4561 aatgccgcga atttgaaaaa gaatttgccg cctttgccgg cacgcggtac gccgtcgccc
     4621 tttccaacgg cacgctggca ctcgatgccg cgctcaaagc aatcggcata ggcgagggcg
     4681 atgatgtggt tgttacctcg cgcaccttcc tcgcctccgc gtcctgcatc gtgaacgcgg
     4741 gcgcaaaccc cgtgtttgcc gacgtggatt tgaacagcca aaacatcagc gcggaaaccg
     4801 tcaaggctgt gctgaccccg aataccaaag cgattatcgt ggttcacctt gccggtatgc
     4861 ctgccgaaat ggacgacatc atggctttgg caaaagaaca tgatttgtgg gtaattgaag
     4921 actgcgccca agcgcacggc gcaaaataca aaggcaaatc cgtcggctct atcggacacg
     4981 tcggcgcgtg gtcgttctgc caagacaaaa tcatgaccac cggcggcgaa ggcggtatgg
     5041 ttacgaccaa cgacaaaacc ctgtgggaaa aaatgtggtc gtacaaagac cacggcaaaa
     5101 gctacgatgc cgtgtaccac cgcgaacacg cgcccggttt ccgctggctg cacgaaagtt
     5161 tcggcacaaa ctggcgtatg atggaaatgc aggcggtcat cgggcgcatc cagctcaaac
     5221 gtatgccaga atggacggcg cgccgccgag aaaacgccgc caagctggcg gaaagcctgg
     5281 gcaaattcaa aagcatccgc ttgattgaag tcgccggcta catcgaacac gcgcaataca
     5341 agttttacgc cttcgtcaaa cccgaacacc tcaaagacgg ctggacgcgc gaccgcatcg
     5401 tcagcgaact gaacgcgcgc aaagtcccct gctatcaagg cagctgctca gaagtgtatt
     5461 tggaaaaagc cttcgacaac acgccgtggc ggcccaaaga gcggctgaaa aacgccgtcg
     5521 agttgggcga taccagcctg atgttcttgg tgcacccgac gctgaccgac ggcgaaatcg
     5581 cattctgcaa aaaacacatc gaagccgtat tgaccgaagc cgcacgataa cccttcagac
     5641 ggcatatgcc gcctgaaagc acataccgcc ccacgatatg actctggaaa ccctgatcgc
     5701 cctgccgcgc aacatcaaga aaatctgttt cctcatacac gattttctga tgattttcat
     5761 tgcattctgg ttcacccaaa gcctaaaggc cgactactcg aacgaatggt tcgaccctgc
     5821 caactggcag tctttcctat tgaccgcgct gttgaccatc ggtctgttcg tcagaatggg
     5881 gctctaccgt gccgttacac gcttcatcag cttccgcatc ctctccaccg cgctggcagg
     5941 cagcattgtt tccgccgtcc tgttcttcct caacacattg atttttgaag aaaggctgcg
     6001 cctcgccctg ccgattgtct atttcttact gctgtttgtt tccgtgaccg gctcgcgtat
     6061 ggttttgcgc ggactgttgt ccgaacaccc caaaaaacag atgatccccg tcatcattta
     6121 cggcgcggga cggtcgggca gacaactgct tgaggccgtc aaacaaatgc gcgaatattc
     6181 cgccgccgcc tttgtggacg acgaccccaa actgtggcgc accgtcatct gcggccttgc
     6241 cgtttaccgc cccgacgaca tcgccgccct catcggacgc tacggcgtgg aaaaaatcct
     6301 gctcgccatc cccggcgcga ctcaggaaca acgccgccga atcatcagca aactggaagc
     6361 ctatccgtgc gaagtgttga ccattcccgg aatgaaagac ctgatggacg ggaaaatcag
     6421 catcggcacg ctcaaaaaaa tctccgtctc cgacctgctc gggcgcgacc ccgtcacgcc
     6481 cgacgaccgc ctgatgagtg ccgacatcga aggcaaaacc gtcatggtaa ccggcgcggg
     6541 cggctccatc ggttcggaac tctgccgcca gattatccgc cgccgccccg aaaagctgct
     6601 gctgttcgag ttatccgaat tcgccctgta cgccatcgaa aaagaattgc gcgaaacctg
     6661 catccaaaaa cgcctcgaca ccgaaatcct gccctttctc ggttcggtgc aaaaccgcac
     6721 gctgctcgaa cacgtcatga ccgccttttc cgttgcgacc gtctatcacg ccgccgccta
     6781 caaacacgtc cccatggtcg agttcaacac cgtcgaaggc atacgcaaca acatcttcgg
     6841 cacactcgaa tgcgcgcttg ccgccacggc ttcgggcgtg gaaaccttcg tcctcatctc
     6901 caccgacaaa gccgtccgcc ccaccaacac gatgggcgcc agcaaacgta tggcggaact
     6961 ctgcctacag gcgctcgccg ccgaacccgg acaaaaaacc cgcttcagca tggtgcgttt
     7021 cggcaatgtt ttaggctcgt ccggctccgt cgtcccgctg tttgaaaaac agattgcaga
     7081 aggcggcccg cttaccctga cccaccccga catcacacgt tatttcatga ccatacccga
     7141 agccgcccaa ctcgtcatac aggcaggcgc gatgggtact ggcggcgacg tattcgtcct
     7201 cgatatgggc gaatccgtca aaatcatcga ccttgcccgc caaatgatta ccttaagcgg
     7261 cctcaaaccc aaaacacccg aacaacccga cggcgacatc gaaatcctca ttaccggact
     7321 gcgtcccggc gaaaaactct acgaagagct gctcatcggc gacaacgtcc gcaaaaccgg
     7381 ccatccgcgc attatgacgg ctgacgaggc gatgctgccg tggcacgagc tctctgtcct
     7441 gctcgaccgc atccgtgcgg cctgcgaccg ttacgaccag caggcaatcc gcaccctgct
     7501 catcaacgcc ccgaccggct ttgccccgag cgacggtatc tgcgacctgc tttgggtacg
     7561 agaaacacac agaaaaaatg ccgtctgaac cttcagacgg cataacgtac aaaccaacct
     7621 accttacaca cacggagttt gacatgcagt tttcggcatt cggcgaaaaa ttcacgcaac
     7681 acagcggcat cctccaactg atggacgacc tcggcgacgc gctcaaaagc gacaagcccg
     7741 tcaacatgct cggcggcggc aacccggcgc gcattccgga aatcgatcgg gcgtttgccg
     7801 acatattctc caaactggcg gcagaacacg ccgtcgaaaa catcggcaac tactccaatc
     7861 ctcaaggaga tgccgcgctg attgacgcgc taaccgcctt cctcaaccgc gaatacggct
     7921 ggaacctgac cgccgacaat atcgcgctga ccaatggttc gcaaaacgcg tttttctatt
     7981 tattcaacct cttcggcggc aaattcaagc tttcagacgg cacatccgca gaaaaagcca
     8041 ttttgttgcc gctcgcgccc gaatacatcg gctatgccga cgtgcatatc gaagggcagc
     8101 acttcgtttc cgccaaaccc aaaatcgaaa acgtcgaaca cgaaggcgaa gcaggcttct
     8161 tcaaataccg cgtgaacttt gacgcactgg aaaacctgcc cgagctgaaa gaaggcaaaa
     8221 tcggcgcgat ttgctgttcg cgcccgacca acccgaccgg caacgtgctg accgacggcg
     8281 aaatggcgcg tttggacgct ttggcgcaaa aacacggcat tccgctgatt atcgacaacg
     8341 cctacggaat gccgttcccc aacatcattt acagcgacgt aacgctgaat tggcatgaaa
     8401 acatcatcct ctgcttcagc ctttccaaag tcggtctgcc gggcgtgcgc accggcatca
     8461 tcgtcgccgc gcccgaagtc gtcaaagccg tcagcagcct gaacgcgatt gtgaaccttg
     8521 cccccacgcg cttcggcgcg gccatcgccg ccccgctgct ggaaagcggc gagatgaaac
     8581 ggcttgccga ccaagtcatc cggccgtttt accgcaatca ggcgcaaacc gccgtctcgc
     8641 tgctcaagcg cgagctgggc gcgtacccga tgaaaatcca caaacccgaa ggcgcgattt
     8701 tcctgtggct ctggtttgaa aacctgcccg tttcttcgca aaccctgtac gaaatactca
     8761 aagccgaagg cacgctgatt attccgggcg agcatttctt catcggcatc gacacgcagg
     8821 attacccgca cgcgggcgag tgcatccgca tgagcatcgc gcaggacgct caaacgctgg
     8881 aaaaaggcat tgccgccatc ggcaaaaccg tccgaaaact gtacgacaac gtttaaaacg
     8941 caaaaaaatg ccgtctgaaa agttttcaga cggcatgaga cctttgcaat aacataggtt
     9001 actaaaat
//
LOCUS       DBBZXW010000074         8932 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.074, whole genome shotgun sequence.
ACCESSION   DBBZXW010000074 DBBZXW010000000
VERSION     DBBZXW010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8932
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.074"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..219
                     /locus_tag="ACJJD2_001556"
     CDS             <1..219
                     /locus_tag="ACJJD2_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7580060.1"
                     /translation="IYYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFP
                     LFLKECEFRFNFGTPSQQLKILRDWCGI"
     gene            432..1967
                     /locus_tag="ACJJD2_001557"
     CDS             432..1967
                     /locus_tag="ACJJD2_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG7580061.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1964..2056
                     /locus_tag="ACJJD2_001558"
     CDS             1964..2056
                     /locus_tag="ACJJD2_001558"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HGG7580062.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2092..3336)
                     /gene="lysA"
                     /locus_tag="ACJJD2_001559"
     CDS             complement(2092..3336)
                     /gene="lysA"
                     /locus_tag="ACJJD2_001559"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HGG7580063.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDATKTIFSGVGKNEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVDGNEYRLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3347..3517)
                     /locus_tag="ACJJD2_001560"
     CDS             complement(3347..3517)
                     /locus_tag="ACJJD2_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HGG7580064.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDTARFGAIQTGLQL
                     QNKPQSAPQTRK"
     gene            3588..3911
                     /gene="cyaY"
                     /locus_tag="ACJJD2_001561"
     CDS             3588..3911
                     /gene="cyaY"
                     /locus_tag="ACJJD2_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HGG7580065.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAEN
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3938..4954
                     /locus_tag="ACJJD2_001562"
     CDS             3938..4954
                     /locus_tag="ACJJD2_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HGG7580066.1"
                     /translation="MNTRPFYFGLIFIAIIAILANYLGNTDFSHHYHISALIIAILLG
                     MAIGNTIYPQFSTQVEKGVLFAKGALLRTGIVLYGFRLTFGDIADVGLNAVVTDAIML
                     ISTFFFTALLGIRYLKMDKQLVYLTGAGCSICGAAAVMAAESVTKAESHKVSVAIAIV
                     VIFGTLAIFTYPLFYTWSQDLINAHQFGIYVGSSVHEVAQVYAIGENINPIVANTAVI
                     SKMIRVMMLAPFLLMLSWLLTRSDGVSENTSHKITIPWFAVLFIGVAIFNSFDLLPKE
                     LVKLFVEIDSFLLISSMAALGLTTQASAIKKAGLKPFVLGILTYLWLVVGGFLVNYGI
                     SKLI"
     gene            4980..5399
                     /locus_tag="ACJJD2_001563"
     CDS             4980..5399
                     /locus_tag="ACJJD2_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HGG7580067.1"
                     /translation="MAQLPLYRTAEIENFTVGTPEVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAQGEWPKVTDRVLDDELQDKILSRKPT"
     gene            5421..5927
                     /gene="luxS"
                     /locus_tag="ACJJD2_001564"
     CDS             5421..5927
                     /gene="luxS"
                     /locus_tag="ACJJD2_001564"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HGG7580068.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLAHKVAVNKNEELT
                     LDEGLLNA"
     gene            6072..8861
                     /gene="polA"
                     /locus_tag="ACJJD2_001565"
     CDS             6072..8861
                     /gene="polA"
                     /locus_tag="ACJJD2_001565"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004518994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HGG7580069.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMAQLTAPDGAPTGAMYGVLNML
                     RRLRADYVHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLIGW
                     PVLVIPQVEADDVIGTLAAMAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDI
                     EGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVMEHAAE
                     IKGKVGENLRAALQRLPLSYDLVTIKTDVDLHTELSDGIESLRRTAPKWAQLVVDFKR
                     WGFRTWLKEAESRMHEAADGDLFGSDSIGEQAALNAEVPSEKQPELAPTPEKLDYQAV
                     TTEAQLAALLDKLSQADTIGIDTETTSLDAMNASLVGISIAFQAGEAIYIPVGHSLTA
                     APEQIDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYII
                     ESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALRL
                     EAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELSRQSAELGAELMKLEQ
                     EAYAVAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPLP
                     KIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQAVAITGRLASNNPNLQNIPIR
                     TAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLITAFQNGEDVHRRTAAE
                     VFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKTFIDRYFARYPGV
                     AEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDLI
                     KRAMIDVRNCLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDVP
                     LVAEVGVGENWEEAH"
BASE COUNT         2103 a         2331 c         2342 g         2156 t
ORIGIN      
        1 atttattacc gcatcaacca ttccaaggaa tttgcagacc gtcagaacca cattaacggc
       61 attgagaatt tttggaatca ggcaaaacgt gtcttgcgaa aatacaatgg aatcgatcgc
      121 aaatctttcc cgctgttctt gaaagaatgc gaatttcgat ttaacttcgg cacaccgtct
      181 caacagctta aaatcctgcg ggattggtgt gggatttagg gctaatctag tacagcccct
      241 aaaatttttc gttttcaagc cttcaccgct tgccatcagc gttaaatttt tttacgataa
      301 gcacatagat tgtaaacaat cggccacaag ccggtttgtt ttttcagaag acattatccc
      361 tgtcagacgc tatttctata tatttcgcct ataatggctt gtttttaata aataattcaa
      421 gaggtatcaa cgtgtctgat tccaagacga aagaacgcgc cacattcggc acgcgccgcg
      481 cgtttatgat tgccgccatc gggtccgccg tcggcttggg caatatttgg cgtttcccct
      541 atattgcttt tgaaaacggc ggcggcgcgt tcatcctgcc ctatctggtc gcgcttctga
      601 cggcgggcat cccgctgctg ctgctcgatt atgccatcgg ccaccgttac cgtggttctg
      661 cgcccttggc tttccgccgc ctcggacgat ggtttgagcc ggtcggctgg tggaacgtga
      721 tgaccaatat cgtcatctgc atctattacg cggtaattat cggttgggcg gcaagctata
      781 cctattattc ggtcaacgcc gcctggggtg cggatccgca gggttttttc tttaaggact
      841 tcctgcaaat ggcgggcccg gaagccttgg gtttggattt tgtcggcaaa gtcgccggtc
      901 ctttggcggg cgtgtgggtt tttaccgccg ccattatggc gttgggcgtg caaaagggcg
      961 tggcgcgcgc ctcgtcgttc tttatgccgc tgcttttggt gatgtttttg attatggtcg
     1021 gcatttcact aaccctgccg ggtgcggcaa agggcttgga cgcattgttt acgcccgact
     1081 ggtcgaaact cgccgattcc aaggtctggg tggcggcata cgggcagatt ttcttttcgc
     1141 tttccatctg cttcggcatt atggttacct attcttctta tttgaagaaa aaaaccgact
     1201 tgggcggaac ggggctggtg gtcggttttg ccaacagcag ctttgaactg ctcgcgggca
     1261 tcggcgtgtt tgccgcattg ggctttatgg cgcaggcggg cggtaaggcg gtcaacgagg
     1321 ttgcctcagg cggcatcggt ttggcgttta tcgcctttcc gaccattatc aaccaggcac
     1381 cgatgggctg gctgatcggc atattgtttt tcggttcgct ggtattcgcc ggcgttacgt
     1441 cgatgatttc catccttgaa gtgattgtgg cggcgattca ggacaagctg aacatcgggc
     1501 gcgtcaacgc cacgctgctg gtctgcattc cgatgggcat tgtttccacg ctgctgttcg
     1561 gtacggcgac ggggctgccg gttttggacg tgatggacaa attcgtcaac acctacggca
     1621 ttgttgccgc cggctttgtt tatgttgccg ccatcatcat cagcggcagg ctgccggaat
     1681 tacgcaagca cctgaacgct ttgtcctcca tccgcatcgg cggcttgtgg acggtctgcg
     1741 tcgtggttac cgtcgtgatg ctcggctata tgctgtttaa agataccagc ggcctgatgg
     1801 agaaaaatta cgaaggttat ccggatggtt tcctcagtat tttcggctgg gggatgtcgg
     1861 cggcgttggt cgtgttcggg ctgctgctgt cgttgctgcc ttggaaacac ggtcaggatt
     1921 tcaacgtcaa agacgaacac gaacatgaac aaggagaaga aaaatgagta cttccgccat
     1981 tgtgatgatg attgtctcaa tcgtgataat ctggggaggg ctgctgcttt ccctgttaag
     2041 gctgccgaac gagtaagcct ttagagcgtt aaaaatgccg tctgaaccgc ttcagacggc
     2101 attttgatgt tcggcttgca ggcaggcgag ttcgtttgcc atttgctgtt ccaaggtttc
     2161 gcgccggcgg atgagtcggt attcgttgcc gtccaccaac acctctgccg cacggttgcg
     2221 cgcgttgtaa ttgctcgcca tactggctcc gtatgcgccc gcgctgcgga taagcagcaa
     2281 atcgccttct tcgcaggcga tggtgcggtc tttgccgagg aagtcgccgg tttcgcaaat
     2341 cggaccgacg atgttggcgg tcagaggctc aatgtctttg gtttcgaccg cctcgatgtg
     2401 atgataggca tcataaagcg ccgggcgcat caaatcgttc atcgccgcat cgaccatcac
     2461 aaagtttttc tcttcgccgt atttgacgaa ttcgacgcgt gtcagcagcg aacctgcgtt
     2521 gccgaccaag ctgcggccgg gctcaagaat gagtttcaga cggcgtgtgc cgatcagttt
     2581 ttgaacggct tgggcatacg cgcccaaatc aggcacattt tcgtcttggt aaacaatgcc
     2641 gacgccgccg cccaagtcca agtgttccaa cacaatgcct tcggcggcaa gcgcgtcaac
     2701 caaaatcaaa atgcgctcgc aggcttcgac cagcgggctt aagtcggtca gttgcgaacc
     2761 gatgtggcag tcgatgccga tgattttcaa attgggctgt tgtgcggcat ggcggtaggc
     2821 ttcgagcgcg tcggcgtagg caatgccgaa tttgttggct ttcagacctg tggagatgta
     2881 gggatgggtt ttcgcatcga catcgggatt gacgcgtagg gagacggacg cggttttgcc
     2941 caaacgcgcg gcaacctttt gaatacggtc gatttcggga atgctttcca tattgaagca
     3001 tttcacgcct gcattcagcg cgaactcgat ttccgcctcg tttttgccca cgccggaaaa
     3061 aatcgttttc gtcgcgtcgc cgcctgccgc caaaacgcgt gccaattcgc cgccggacac
     3121 aatgtcaaaa ccgctcccca aagaagcaaa gtgtttgatg atgctcaggt tgccattggc
     3181 tttaaccgca tagcagacga gcggggagag ctcggcaaag gcagtttggt agtgttcaaa
     3241 tgcttcggtc agcgcggatt ggctgtacac ataaagcggt gtgccgaatg cttcggcaag
     3301 gcgggggtag gggacttgtt cgcaaaacag ggtcatatct tcgttttcat tttcgggttt
     3361 gtggggcgga ttgcggtttg ttttgaagct gcaaaccggt ttggattgcg ccgaaacgcg
     3421 ccgtatcgcc ttctttgggc aggtagaggt cgcctttgta accgcaggcg gaaagcagga
     3481 gggcggttgc cgccgcaaaa aatacgccgt atttcatcgg taaacttcct tcataagcgc
     3541 gaatgtggca agattcggta tcttaaacaa aaaccacaca aaaagccatg atgaccgaaa
     3601 gcgagtttat ccgcgcgagc gaagcattat ttgaacacat cgaagaccaa atcgacgaaa
     3661 acggctggga tttcgactgc cggtttgccg gaaacgtcct gaccatcgaa gccgaaaacg
     3721 gcacgcaaat catcgtcaac cgccacacgc ccaaccaaga attatggatt gccgccaaaa
     3781 gcggtggcta ccatttcgcc gaacaaaacg gcaaatggct ggcaacgcgc gacggacggg
     3841 atttttacga cgttttaaac gaagccctga gcgcggcttc gggcgaagcg gtagagattg
     3901 aggaattgtg atttgggtgt tatcacggaa agaaaaaatg aacacacgtc ccttttattt
     3961 cggacttata tttatcgcga ttattgctat acttgctaac tatttaggaa acactgattt
     4021 ttcccatcat tatcatatca gtgctttaat tattgctatc ttgctgggaa tggcaatcgg
     4081 caataccatt tatccgcaat tttcaacaca agtggaaaaa ggtgttttgt ttgccaaagg
     4141 cgcgcttctt cgcactggca ttgtgttgta tggttttcgc ctcacttttg gcgatattgc
     4201 cgatgtagga ttaaatgcgg ttgtcactga tgcaatcatg ctaatttcaa ccttcttttt
     4261 taccgcactt ttaggcattc gttatctaaa aatggataaa caattggttt atctcactgg
     4321 ggcaggttgc agcatttgcg gtgcggcagc ggttatggcg gcagagtctg ttaccaaagc
     4381 agaatcccat aaagtttcag tggcgattgc catagtggtc attttcggga cgcttgctat
     4441 ttttacttac cccttgttct acacgtggtc acaagattta attaacgccc atcaattcgg
     4501 tatttatgtt ggttctagtg tacacgaagt ggctcaagtg tatgcgattg gggaaaatat
     4561 taatcctatc gtggcgaata ctgccgtcat ttccaaaatg atccgagtga tgatgctcgc
     4621 ccccttttta ttaatgcttt cttggttatt aacacgtagt gatggggtat cagaaaatac
     4681 ctcacacaaa attacaattc cttggtttgc tgtacttttt attggtgttg ccatttttaa
     4741 ttcttttgat ttattaccaa aagaactcgt gaaattattc gttgaaatcg attctttctt
     4801 attaatttca tcaatggctg cgcttggctt aacgacgcaa gcaagcgcaa tcaaaaaggc
     4861 aggattaaaa ccgtttgttt taggaatact aacttattta tggctagtgg ttggtggatt
     4921 tttagtgaac tatggaatat caaaattaat ataaaattca ctaaagagag cgttacccaa
     4981 tggcacaatt acccctgtat cggactgccg aaatcgaaaa ttttactgtc ggcacgcccg
     5041 aagttttaga atcattttcc aaacatatcc cttatggtgt tgtctttgaa gacgacggcg
     5101 acacaggcta cttctatgcc gcttcgcaag acgggatttt agatgccttg cacatttaca
     5161 atgtcgaaga tgtatccgat aaacatatcc ccaatcatgt cttgatttta tgggatgatg
     5221 cctgcaccat agccgcattg tgtatcaacg actacattca tgccgtctat gattttgtcg
     5281 aacaggcagg atattgccgc aacggcttcc ctgaagcaca aggcgaatgg ccgaaagtca
     5341 cagaccgcgt attggacgat gaattgcagg acaaaatcct atcccgaaaa cctacataac
     5401 ctactcaaaa ggataaccca atgcccctac tagacagttt caaagtcgat cacacccgta
     5461 tgcacgcccc cgccgtacgc gtggcgaaaa ccatgaccac gcccaaaggc gacaccatta
     5521 ccgtattcga cctgcgtttc tgcgtgccca acaaagaaat cctgcccgaa aaaggcatcc
     5581 acacgctgga gcatttgttc gccggtttta tgcgcgacca cttgaacggc aacggcgtgg
     5641 aaattatcga catttccccg atgggctgcc gcaccggttt ctacatgagc cttatcggca
     5701 cgccttccga acagcaggtc gccgatgcat ggctcgcctc gatgcaggat gtgggcaatg
     5761 tcaaagacca aagcaaaatc cccgagttga acgaatacca atgcggcact tatcaaatgc
     5821 actcgctcgc cgaagcgcag caaatcgcgc aaaacgtgtt ggcgcacaaa gtggcggtga
     5881 acaaaaacga agagctgacg ctggatgaag ggctgctgaa cgcctaatcc gccaaaaatg
     5941 ccgtctgaac aagggtttca gacggcattt gccttttccg ttataatccg gggttgtgcg
     6001 gggtcgggtt ttaagccggc atcgtccttc cctatttttt ctgtccctta tcggttttaa
     6061 gcgggttttt tatgtccaac agacctacac tcctcctcgt tgacggctcg tcctacctct
     6121 accgcgcgta tcacgcgatg gcgcagttga ccgcgcccga tggtgcgccg acgggcgcga
     6181 tgtatggcgt gttgaacatg ctgcgccggt tgcgggcgga ttatgtgcat gattattgcg
     6241 cggtggtgtt tgatgcgaag ggcaagaatt tccgccacga gatgttcccc gactacaagg
     6301 cgacgcgccc gccaatgccg gacgatttgc gtcctcaagc ggaagccttg ccggatttgg
     6361 tgcggttgat aggctggccg gtgctggtga ttccgcaagt cgaagcggat gacgtgattg
     6421 gcacgctggc ggcaatggca ggcgaagcag gttggaatgt ggtggtgtcc accggcgata
     6481 aggacatggc gcagttggtg aacgaacgcg taacgctggt gaacacgatg agcggcgaaa
     6541 cgctggacat tgaaggtgtg aaggcgaaat tcggcgtgcg ccccgaccaa atccgcgatt
     6601 atctcgcgct gatgggcgac aaggtggaca acgtgccggg cgtggaaaag tgcggcccga
     6661 aaacggcagt gaaatggctg gaagcctacg gctcgctggc gggcgtgatg gaacacgcgg
     6721 cggaaatcaa gggcaaagtg ggcgagaatc tgcgtgccgc cctgcagcgc ctgccgctgt
     6781 cgtatgattt ggtgacgatt aaaaccgatg tggacttgca caccgaactt tcagacggca
     6841 tcgaaagcct gcgccgtacc gcgccgaaat gggcgcaact ggttgtcgat ttcaaacgct
     6901 ggggcttccg cacctggctg aaagaagcgg aaagtcgtat gcacgaagcg gcggacggtg
     6961 atttgttcgg cagcgacagc atcggcgagc aggcggcttt gaatgcggag gtgccgtctg
     7021 aaaaacaacc cgaacttgcc ccgacccccg aaaaactgga ttatcaagcc gttaccaccg
     7081 aagcgcagct tgccgccttg ttggacaaac tgtcgcaggc ggacacaatc ggcatcgata
     7141 cggaaaccac gtcattagac gcgatgaacg cctcgttagt cggcatcagc atcgcgttcc
     7201 aagcaggcga agcgatttac atccccgtag ggcacagcct gaccgctgca cccgaacaga
     7261 ttgatttgca agacgtatta ggccgtctga aaccgcattt ggaaaacccc gccctgaaaa
     7321 aaatcgggca aaacctcaaa tacgaccaac acgttttcgc caactacggc attgccttaa
     7381 acggcattgc cggcgacgcg atgcttgctt cctacatcat cgaaagccac ctcggacacg
     7441 gcttggacga attgtccgaa cgctggctgg gcttggaaac cattacctac gaatcgctgt
     7501 gcggcaaagg cgcgaagcaa atcagttttg ccgatgtcgc catcggacag gcgaccgaat
     7561 acgccgccca agacgccgat ttcgccctgc gcctcgaagc gcatctgcgt gcgcaaatgg
     7621 acgccaaaca gcttgaaatg tatgaaaaaa tggagctgcc cgtcgcgcag gtattgtttg
     7681 aaatggaacg caacggcgtg caaattgatc gcgccgaact ctcccgccaa agcgcggaac
     7741 tcggcgcaga gctgatgaag ctcgaacaag aagcctatgc cgtcgcaggc cagccgttta
     7801 acctcaactc gcccaaacag ctccaagaaa tcctgttcga caaaatgggc attcccacca
     7861 aaggcctgaa aaaaaccgcc aaaggcggca tttccaccaa cgaagccgtg ctcgaacagc
     7921 tcgcacccga ctaccccctg cccaaaatca tcctgcaaaa ccgcagcctg gcgaagctca
     7981 aatccaccta caccgacaaa ctgcccgaaa tgatttcccc caaagacggc cgcgtgcata
     8041 ccacctacgc ccaagccgtc gccattaccg gccgtctcgc cagcaacaac cccaacctgc
     8101 aaaacatccc catccgcacc gccgaaggcc gccgcgtgcg ccgcgccttt accgcaccgc
     8161 aaggcagcgt catcgtttcc gccgactatt cccaaatcga gctgcgcatc atggcgcacc
     8221 tctccggcga caaaaccctg attaccgcgt tccaaaacgg cgaagacgta caccgccgca
     8281 ccgccgccga agtgttcggc attgcccccg aaaacgtctc gtccgaacaa cgccgctacg
     8341 ccaaaaccat caacttcggt ctcatttacg gcatgggcca atacggcctc gccaaatcat
     8401 tgggtatcga caacatctcc gccaaaacct tcatcgaccg ctacttcgcc cgctatcccg
     8461 gcgtcgccga atacatgcag cgcaccaaag aacaagcagc agcgcaaggc ttcgtcgaaa
     8521 ctctgttcgg ccgccgcctc tacctgcccg acatccgcaa caaaaacgcc aacgcccgcg
     8581 ccggagccga acgcgccgcc atcaacgccc ccatgcaagg caccgcctcc gacctcatca
     8641 aacgcgccat gatagacgtg cgaaactgtc tttcagacgg catcggcagc aaactggtca
     8701 tgcaggtgca tgacgaactg gtgctggaag tcgttgaaac cgaactggat tttgtcaaag
     8761 aaaaactgcc gcagattatg gcgaaagtgg acggcggatt attggatgta ccgctggtgg
     8821 ctgaggttgg cgtaggggag aattgggaag aggcacattg attgaaaggt gttatatgct
     8881 atctttattt aaataaaatt taatttttgg tatatttttt ctaaatgttc ct
//
LOCUS       DBBZXW010000075         8909 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.075, whole genome shotgun sequence.
ACCESSION   DBBZXW010000075 DBBZXW010000000
VERSION     DBBZXW010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8909
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.075"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..297)
                     /locus_tag="ACJJD2_001566"
     CDS             complement(<1..297)
                     /locus_tag="ACJJD2_001566"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7580070.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYIDEVLTAGHGKLYQSDGRH"
     gene            536..1435
                     /gene="crgA"
                     /locus_tag="ACJJD2_001567"
     CDS             536..1435
                     /gene="crgA"
                     /locus_tag="ACJJD2_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HGG7580071.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSAEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1662..4877)
                     /gene="carB"
                     /locus_tag="ACJJD2_001568"
     CDS             complement(1662..4877)
                     /gene="carB"
                     /locus_tag="ACJJD2_001568"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HGG7580072.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTPEEIHEI
                     CAIDPWFLAQIEDLVKEEKSVSDGILSDLDFAALRRLKRKGFSDKRIAQLLGVKEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRS"
     gene            complement(4906..5547)
                     /locus_tag="ACJJD2_001569"
     CDS             complement(4906..5547)
                     /locus_tag="ACJJD2_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6037 family protein"
                     /protein_id="HGG7580073.1"
                     /translation="MSIPINFNNLKYLLNDMRNKNRIIEAFPFNYNQRQYAVILTRYK
                     PDEPRPDDYAQAKLEFFNLNSENSIFAYADFYEVHFKSATDFINFFKINVQAGAAKIR
                     EIFQSFSNLFADFIPTQTKKDLDIIYKKIVATRLEPNSPNTIYCYDVRRNGKDKAGKP
                     NRRSVENSEKAKILRPELYEKFKADSNYSFFFSDNPSDEKTDAEIIREVTNRQ"
     gene            5709..6107
                     /locus_tag="ACJJD2_001570"
     CDS             5709..6107
                     /locus_tag="ACJJD2_001570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580074.1"
                     /translation="MRYVCTRSPFSLQPQPTACVPCGTLSADEFKGRLKKRSQRLFHL
                     PCDKGCLKHSRCRCFGHSFSDDLQRLNLLQPTPSPVGEGWGEGILRISATFPNTLTAK
                     TQALWLVALSLTLSHGREDWAVVGAKVSVN"
     gene            complement(6215..6604)
                     /locus_tag="ACJJD2_001571"
     CDS             complement(6215..6604)
                     /locus_tag="ACJJD2_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HGG7580075.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7178..7303)
                     /locus_tag="ACJJD2_001572"
                     /pseudo
     CDS             complement(7178..7303)
                     /locus_tag="ACJJD2_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7349..8482)
                     /gene="carA"
                     /locus_tag="ACJJD2_001573"
     CDS             complement(7349..8482)
                     /gene="carA"
                     /locus_tag="ACJJD2_001573"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HGG7580076.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNQTVAIADIDTRRLTTLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         1978 a         2281 c         2326 g         2324 t
ORIGIN      
        1 gtgtctgccg tcgctttggt agagtttgcc gtgtccagcg gttaatactt cgtctatgta
       61 ttttttcact gtccaaggct cgtgcatcca ccagcccggc atctgccaaa tcacagcatc
      121 catccaaacg aatttttcga tttctgcctc aacatcatag ccggcatcaa tcacggtttc
      181 ttgaacattg tgtccgagcg cggtcaaaac ttctttcgct tttttgtgaa gcgtgcggtt
      241 taacccgccg tgagaatgtc cgaacgcttt gccgccgtct aataataaaa tattcatttg
      301 ttacctcgtt tgtgaattga tgaatgtatt gtgccgtttt actttataat ttaaaagtgc
      361 aaaaataaga aaacactttt gcgtcaaatg aaataatcag atgttccaac acacgggatg
      421 gcacataaag caccgccctg tgtgccgtcc tgattcggaa ggggttacac ccctcccaaa
      481 taaagtctga tcctgccgcc ctaaagggcg gggttccaac cgaaaaggaa acacgatgaa
      541 aaccaattca gaagaactga ccgtatttgt tcaagtggtg gaaagcggca gcttcagccg
      601 tgcggcggag cagttggcga tggcaaattc tgccgtaagc cgcatcgtca aacggctgga
      661 ggaaaagttg ggtgtgaacc tgctcaaccg caccacgcgg caactcagtc tgacggaaga
      721 aggcgcacaa tatttccgcc gcgcgcagag aatcctgcaa gaaatggcag cggcggaaac
      781 cgaaatgctg gcagtgcacg aaataccgca aggcgtgttg cgcgtggatt ccgcgatgcc
      841 gatggtgctg catctgctgg cgccgctggc agcaaaattc aacgaacgct atccgcatat
      901 ccgactttcg ctcgtttctt ccgaaggcta tatcaatctg attgaacgca aagtcgatat
      961 tgccttacgg gccggagaat tggacgattc cgggctgcgt gcacgccatc tgtttgacag
     1021 ccgcttccgc gtaatcgcca gtcctgaata cctggcaaaa cacggcacgc cgcaatctgc
     1081 agaagagctt gccggtcacc aatgtttagg cttcaccgaa cccggttctc taaatacatg
     1141 ggcggtttta gatgcgcagg gaaatcccta taagatttca ccgcacttta ccgccagcag
     1201 cggtgaaatc ttacgctcgt tgtgcctttc aggttgcggt attgcttgct tatcagattt
     1261 tttggttgac aacgacatcg ctgaaggaaa gttaattccc ctgctcgccg aacaaacctc
     1321 caataaaacg caccccttta atgctgttta ttacagcgat aaagccgtca acctccgctt
     1381 gcgcgtattt ttggattttt tagtggagga actgggaaac aatctctgtg gataattcta
     1441 taaaaacctg ccataaaatt gtttttactc acttaataac tttgagaaaa aataaataag
     1501 atgatgtata gtcggcggca atggcagtct atatggggag cgtgataggg ctgttcctta
     1561 tgtacggctt gtgtgtggca acatcggctt tccaaatgac aaaatgccgt ctgacaccgt
     1621 aaaaaaaggt ttcagacggc attttcaacc cgattcaggc atcagctgcg gtttttcaaa
     1681 cgcccgtgca gttcttgaac gctgtacacg cccaagtggt cgcggctttt cgcgccttcg
     1741 ctcatcgctt cgccgcccgc agtagtggtg tattgcggca cacgttgctg caatgcgctt
     1801 tggcggatga tgtggctgtc ggacacggat tgcggatcgc tggaaacggt attcacgacc
     1861 agtgcgattt cgccgttttt cagcgcgtcg ccgatgtgcg ggcggccttc ggggacttta
     1921 ttgatggttt gtacaatcag cccgtgttcg gtcaggtatt gcgccgtgcc gcgcgtggcg
     1981 cagatgccgt agcctaaggc ttggaagttt ttggcggttt taatgacgcg ttctttgtct
     2041 tcttcgcgca cggagaggaa gattttgccg gtcgggttga ggcgttcgcc cgcgccgagt
     2101 tgggctttgt agtaggcttc gccaaagctt gcgcccacgc ccatgacttc gccggtggag
     2161 cgcatttccg gtcccaaaat cgtatccacg cccgggaatt tgatgaatgg gaacacggct
     2221 tctttaacgg catagaaatc ggggacaact tctttttcca cgccttgttc tttcagggaa
     2281 atgcctgcca tgcagcgcgc gccgactttg gcgagcggca cgccggtggc tttggagacg
     2341 aagggcacgg tgcggctggc gcgcgggttc acttccaata cgaacaccac gccgtcttgt
     2401 acggcaaact gcacgttcat cagtccgacc acgcccagcg cgtacgccat cgctttagtt
     2461 tggcggcgga tttcgtcttg gatttcttcg cttaaggagt agggcggcag cgagcagccg
     2521 gagtcgccgg agtggatgcc cgcctgttcg acgtgctgca tgatgccgcc gataaccacg
     2581 tctttgccgt ctgaaacgca gtccacatcc acttcaatcg cgttgttgag gaagaaatcg
     2641 agcaacacgg ggctgtcttc ggaaacctgc acggcttcgc gcatgtattt ttgcaaggct
     2701 tcggcagagt ggacaatctg catcgcgcgt ccgcccaaaa cataagacgg gcgcacgacc
     2761 agcggatagc cgatttcttc ggctttgacg agtgcttctt cttcgttgtg ggcgatgcgg
     2821 ttgggcggtt ggcgcagacc taagtcgttc aacacttttt ggaagcgttc gcggtcttcg
     2881 gcggcgtcga tgctgtcggc ggacgtgccg atgatgttta cgccgttttc aaccagcgcg
     2941 ttggcgagtt tgagcggggt ttgaccgccg taatgcacaa tcacgcccca cgggttttcg
     3001 gtgcggacga tttccaacac gtcttccaat gtcagcggct cgaaatagag gcggtcgctg
     3061 gtgtcgaagt cggtggacac ggtttctggg ttgcagttga ccataatcgt ttcaaaaccg
     3121 gattcgcgca gggcgagcgc ggcgtgaacg cagcagtagt caaactcgat gccctgaccg
     3181 atgcggttcg ggccgccgcc gagaatcatc acttttttac ggtcggaagg acgggattcg
     3241 cattcttctt cgtaagtgga gtaaagatag gcggtttcgg tggcgaactc ggcggcgcag
     3301 gtgtcaacgc gtttgtaaac cggatgcagc ttcagcgcgt agcggtgttc gcgcacttct
     3361 ttttctttta cgcccaaaag ctgcgcgatg cgtttgtcgg agaagccttt gcgtttcaga
     3421 cggcgtaggg cggcgaaatc caaatcactc aaaatgccgt ctgaaaccga tttttcttct
     3481 ttcaccaagt cttcgatttg cgccaagaac caagggtcga tggcgcagat ttcgtggatt
     3541 tcttccggcg tgaagcccgc gcggaacgcg tctgccacaa acagcatgcg ctcggggccg
     3601 gggtttgcca gttcgcggcg gatttccgct ttgtcggagc ttctcggatt gaagccgcac
     3661 aagcctgttt ccaagccgcg cagggctttt tggaaacttt cctgaatcgt gcgtcccatc
     3721 gccatcactt cgcccaccga tttcatctgc gtggtcaggc ggtcgtctgc ggcagggaat
     3781 ttttcaaacg caaaacgcgg gattttggtt accacatagt cgatggacgg ctcgaatgac
     3841 gcgggggttt tgccgccggt gatgtcgttg cgcaactcgt ccagcgtaaa gccgaccgcc
     3901 agtttcgccg ccaccttcgc aatcgggaag cccgtcgctt tggaagccag cgcggatgaa
     3961 cggctcacgc gcgggttcat ctcaatcaca atcatctcgc cgttttcagg gttcaccgca
     4021 aactgcacgt ttgagccacc cgtgtccacg ccgatttcgc gcaatactgc caacgaagca
     4081 ttacgcatga tttggtattc tttgtctgtc aatgtttgcg ccggcgcaac cgtaatcgag
     4141 tcgcccgtat gcacgcccat cgggtcgaag ttttcaatcg agcaaatgat gatgcagtta
     4201 tcgttcttat cgcgcaccac ctccatctcg tactctttcc agccgaggac ggactgctca
     4261 atcagcagct cgtgcgtggg cgacgcatcg aaaccgcgtt cgcaaatcgc caaaaactcg
     4321 tctttattgt aggcaatgcc gccgcccgaa ccgcccatcg tgaaagacgg acgaatcagc
     4381 gtcgggaagc cgacctgttc ttgcgccgcc aaggcttcgt tcatcgtgtg gcagacaaaa
     4441 gatttcgggc aagacaaacc gattttttcc atcgcttctt taaagcggcc acggtcttcc
     4501 gccttgtcaa tcgcgtcttc tgtcgcgccg attaactcga cgttgtattt cgccagcacg
     4561 ccgttgcgcg ccaaatccag cgcacagttc agcgcggtct ggccgcccat cgtgggcaga
     4621 atcgcatcgg gccgctcttt ggcgataatc ttctccaccg tctgccacat aatcggctcg
     4681 atgtaggtaa catccgccat ttcagggtcg gtcatgatgg tggcggggtt ggagtttacc
     4741 aaaatgactt tatagccttc ttcacgcaaa gccttgcagg cctgtgcgcc cgaatagtca
     4801 aattcgcagg cctgaccgat aacgataggg ccggcgccga tgataaggat ggattttagg
     4861 tcggtacgtt tgggcatggt gggtctttct tttgaagaat ttggattatt gacgattggt
     4921 aacttctcta attatttctg catctgtttt ttcatcgctt ggattatctg aaaagaaaaa
     4981 actgtaatta ctatcggctt taaatttttc gtatagctct gggcgcaaaa tttttgcttt
     5041 ttcactattt tccacgctcc tgcgattagg cttgccagcc ttatctttcc catttctacg
     5101 gacatcatag caataaatag tgttaggaga attaggttct aaacgagtag ctacaatctt
     5161 tttataaatt atgtctaaat cttttttagt ttgtgttgga atgaaatctg caaaaagatt
     5221 actaaaactc tgaaaaattt ctctgatttt cgcagcacca gcctgaacat taattttaaa
     5281 aaaattaata aaatcagtag cacttttaaa atgaacttca taaaaatcag catacgcaaa
     5341 tattgaattt tcactattca aattaaaaaa ctctaatttt gcttgtgcat aatcatctgg
     5401 tctaggttca tcaggtttat acctagtcaa aataacggcg tattgccttt gattataatt
     5461 aaaaggaaat gcttcaatta ttctattttt gtttctcata tcattaagca aatactttaa
     5521 gttattgaaa ttaataggta ttgacatatt taaactcctg cgaatatgtt gcaataaacg
     5581 tagcaatcgt aggttgggtt gaaaacccaa cacaaaccgc ttaattgtct aaaatgttgg
     5641 gtttgctaac ctaacttgta tatcgaaacc cccgtatcgt agcaagccgt agcccgtatg
     5701 tagggtatgt gcggtacgta tgcacgcgtt ctccattttc cctgcaaccc caacccaccg
     5761 cgtgtgtgcc ttgcggcaca ctctctgccg atgagttcaa aggtcgtctg aaaaaacgtt
     5821 cgcaacgttt gttccacctg ccttgcgata aaggctgcct gaaacattcc cgctgtcgat
     5881 gtttcgggca ttctttttca gacgacctgc aacgcctgaa tctgctgcaa cctaccccct
     5941 cccccgtggg ggagggctgg ggagagggca ttctccgaat ttcggcaacc tttcctaaca
     6001 ctctaaccgc caagacacaa gccttgtggc ttgttgccct ctctctaact ctctcccacg
     6061 ggagagagga ctgggcggtt gttggggcta aggtttctgt aaactaatca ggttatgcag
     6121 gctgcttttt gtttttcaga cggcctttat aaatgctcaa ttcagtcggc tttatcctat
     6181 tattttcaat aatccaatca aaatcagcca tctgctatcg tgcagcttgc ttttccaatt
     6241 cttgcaacac gagcaggatt tctgtcagca catcgtttgt ctgctgtaaa atctcgtgat
     6301 tccaaaaccg cagtacggta aagcccaagc tgttgagata tgccgtccgc gcgtggtcgt
     6361 atgcggcttg ttctgtgtgc tgccctccgt ctgcttcgac aatcaacttg ggcgttacgc
     6421 acataaaatc aacaatatag tttcccatcg gctgctggcg gcggaattta tagccgttca
     6481 gacgacctgc ccgcaggtgc tgccacaatt ttgcttccgc cccgctcatt tcttggcgca
     6541 tggctttggc gcgttggcgc aagatggggt tgtcggtggt caagagtttc tcgtgcgggt
     6601 tcattttgtt gtcgtgctgt ttgctgccct ctctctaact ctctcccacg gggagagagg
     6661 acggggcggt tgttggggtt aaaggggctg taaggaaaac aagtcgttca ggccactttt
     6721 tacttttcag acgacctgca atcaacggtt gtaaatccaa gttgcttttc aaaccgcctg
     6781 taaccgcaaa acttgctgca acctaccccc tcccccgtgg gggagggctg gggagagggc
     6841 attcttcgaa tttcggcaac cttccccaac accctaaccg cccaaacaca agccttgctg
     6901 tttgttgccc tctctctaac gctttcccac agggagacag gacggggcgg ctgtagtgat
     6961 taagggtttt gcaaggaaaa caaggaaaac aagttgtaca ggctgttttt ttatttttca
     7021 agcgacctga aatcaacgct tgtaaatcca agtcgctttt caaactgcct gcaaccgcaa
     7081 aatctgctgc aacctacccc ctcccccgtg ggggagggct ggggagaggg cattttccaa
     7141 gttgcggcaa tctttcccaa atcccttagt cttctaaaat acaagcctta cggttgttgc
     7201 caaatgaaac ttcttccata cccaaaactt gcgtgtaaaa cgcaatggtt cggtcaatgt
     7261 cggcaacggt cagtaccaga tggtcgagtg cgctaatctt catttcccgc tttctttttc
     7321 aggcggcggc agtgccgtct gaaagccatt atgcccgttt tgccgctttc atattgccaa
     7381 tgaatttgtc aaacaaatag ccgacatctt gcgggccggg gctggcttcg gggtggcctt
     7441 ggaagcagaa cacaggtttg tcggtcagct cgatgccttg caaagtgttg tcaaacaagg
     7501 atttgtgggt aatgcgtgcg ttagcgggca gggtgtcggc atcaacggca aaaccgtggt
     7561 tttggctggt gatgacgact ttgccgctgt ccaaatcttg cacagggtgg ttcgcaccgt
     7621 ggtggctgaa gcgcattttc agggttttcg cgccgatagc gaggctgatg agctggtgtc
     7681 ccaagcagat gccgaaaatc ggtttgccgc tttccatcag tttttgcacg gcttcgatgg
     7741 cgtaggtgca aggctcgggg tcgccggggc cgttggacag gaacacgccg tcgggattga
     7801 gtgccaacac gtcttgtgcg ctcgtttggg cggggacgac ggtcaggcgg cagccgcgcg
     7861 aggcgagcat acgcaggatg ttggttttca cgccgaaatc gtaggcgacg acgtggtaag
     7921 gctgttcgtc aggggtaacg aaacccttgc ccaatgccca ttcaccttcc gtccattcgt
     7981 aagtttccgt gcaggaaact tcttttgcca agtctttgcc gaccatgctg ccgaacgcgg
     8041 cgatgagttc ttgcgctttt tcgaccgtag cgtccgcgcc ggtcagaatc gcaccgcctt
     8101 gcgcgccttt ttcacgcaac agcgtggtca ggcggcgggt gtcgatgtcg gcgatggcaa
     8161 cggtttggtt gcgcaccaga tagtcgtgca ggctttcgga ggcgcggaag ttgctgtgca
     8221 agagcggcag gtcgcggata atcaaaccgg cggcgtaaac gctgcggctt tcttcatctt
     8281 cggcgttggt accggtattg ccgatgtgtg ggtaggtgag ggtaacgatt tgtttgcagt
     8341 aggacgggtc ggtcaggatt tcctgatagc cagtcatcga agtattgaac acgacttcgc
     8401 cggaagtcga accttcgtaa ccgattgatg tgccgtggaa tacgctgccg tcagcgagga
     8461 cgaggagggc gggggtgctc atgatgggaa tcctgttttt aataaaattc ttgacaatgc
     8521 cgtctgaagg gacttcggca gggggcatcc ggtcggaaaa atccggtcaa aaaaaaacac
     8581 gccgcgcaag atagacgcgt aacgtgcttt tcgggcaagt gcctataccc tgaaagcagc
     8641 atattttaag acgaaacata cccgatttca agcgcaaacg cggcaggcgg gctgatatgt
     8701 tcgcgcgaaa acggaaatcc gtggcgtaaa accgcccgct ccgcgcccac tatgcccgtt
     8761 acgcatttcc ccacgtccgt ccggcgaaac tatgggaata cccgaatcgt cattcccacg
     8821 aaagtgggaa tccagttttt tgagtttcag tcatttccga taaattgcct tagcattgaa
     8881 tgtctagatt cccgcctgcg cgggaatga
//
LOCUS       DBBZXW010000076         8790 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.076, whole genome shotgun sequence.
ACCESSION   DBBZXW010000076 DBBZXW010000000
VERSION     DBBZXW010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8790
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.076"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(93..452)
                     /gene="rnpB"
                     /locus_tag="ACJJD2_001574"
     ncRNA           complement(93..452)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACJJD2_001574"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(531..1634)
                     /gene="prfB"
                     /locus_tag="ACJJD2_001575"
     CDS             complement(531..1634)
                     /gene="prfB"
                     /locus_tag="ACJJD2_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HGG7580077.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1737..2630)
                     /locus_tag="ACJJD2_001576"
     CDS             complement(1737..2630)
                     /locus_tag="ACJJD2_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HGG7580078.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYFDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2972..3421
                     /locus_tag="ACJJD2_001577"
     CDS             2972..3421
                     /locus_tag="ACJJD2_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HGG7580079.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3495..3803
                     /locus_tag="ACJJD2_001578"
     CDS             3495..3803
                     /locus_tag="ACJJD2_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580080.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3919..4761
                     /locus_tag="ACJJD2_001579"
     CDS             3919..4761
                     /locus_tag="ACJJD2_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HGG7580081.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEC
                     RRAA"
     gene            4751..5497
                     /locus_tag="ACJJD2_001580"
     CDS             4751..5497
                     /locus_tag="ACJJD2_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HGG7580082.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNHSKYTPSPAAFIRQYRYDVTDDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5519..6106
                     /locus_tag="ACJJD2_001581"
     CDS             5519..6106
                     /locus_tag="ACJJD2_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HGG7580083.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTQEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6112..6291
                     /locus_tag="ACJJD2_001582"
     CDS             6112..6291
                     /locus_tag="ACJJD2_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HGG7580084.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6532..6972
                     /locus_tag="ACJJD2_001583"
     CDS             6532..6972
                     /locus_tag="ACJJD2_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HGG7580085.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQSYTASSLRPMSILSGTLTEKQYETVCGKKL"
     gene            7380..7552
                     /locus_tag="ACJJD2_001584"
                     /pseudo
     CDS             7380..7552
                     /locus_tag="ACJJD2_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7549..7896)
                     /locus_tag="ACJJD2_001585"
                     /pseudo
     CDS             complement(7549..7896)
                     /locus_tag="ACJJD2_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467771.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            7994..>8790
                     /locus_tag="ACJJD2_001586"
     CDS             7994..>8790
                     /locus_tag="ACJJD2_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HGG7580086.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLEQVIDWQPIEHYLNRQKTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
                     TLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVIDATIIQTAGSKQRQAIE
                     VDEEGQVSGQTTPSKDKDARWTKKNGLYRLGYKQHTRTDEEGYIKKLHITPANAHECK
                     HLSPLLEGLPKGTTVYADKGYDSAENRQHLEEHQLLDGIMRKACRNRP"
BASE COUNT         2340 a         2341 c         1941 g         2168 t
ORIGIN      
        1 ggtttttgtt aatccactat aaaaacacaa cctaaataaa aatgccgtct gaaccatatt
       61 tcaggtttca gacggcattt gcgtgtcgga tgcacaccgg acgggcggta agccgggttc
      121 tgtctcggac agtcattcct ctaggcatac cgttaccggt atgctcaagc aacctacccg
      181 aacgctcggc gggcagcgtc attgcgttct gtttggtctt gctccgaatg gggtttggcc
      241 tgccgcatat tgttaccaaa tgcgcggtgc gcccttaccg caccttttca cccttgcctg
      301 tgctgccaaa gcagccatcg gcggttttgc tttctgttcc actttccgtc gcgttaccgc
      361 gcccggccgt taaccggcat tctaccctgc ggagcccgga ctttcctccc cgtatgcctt
      421 acgcgatacg cggcgactgt ctgcccgtcc cgtgtgcggc gcggattata acacgaaacg
      481 caaaaatgcc gtctgaaacg gtacaggttt cagacggcat acggttcaaa ctacacgccc
      541 tgtttcaggc tggcttcgat aaagccgtcc aaatcgccat ccaatacggc tttggtgttg
      601 ccgacttcgt agcctgtacg caagtctttg atacgtgagg aatccaaaac atacgaacgg
      661 atttggctgc cccaacctac atcggattta ccttcttcca acgcctgttt ctcttcgttg
      721 cgtttgcgca tttccaattc atacagtttg gatttcaaca tttccatcgc ggccgctttg
      781 ttggcgtgtt gcgaacggtc gttttgacat tgcaccacaa tccccgtcgg ctcgtgggta
      841 atacgcacgg cggagtcggt tttgttgatg tgctgaccgc ccgcgcccga tgcgcgatag
      901 gtgtcgatac gcaaatcggc ggggttgatt tcgatttcaa tggaatcatc gatttcaggg
      961 taaacgaaca cggaggcaaa cgaagtatgg cgtttgttgt tcgagtcaaa cggtgaatag
     1021 cgcaccaagc ggtgaacgcc ggtttcggta cgcagcaaac cataggcgta ttcgccttcc
     1081 actcggatag tcgcgcggtt gatgcccgcg atttcgccgt cgtcttcttc gaggatttcg
     1141 attttgaagc ctttgcgctc ggcgtagcgg ctgtacatac ggaacagcat acccgcccag
     1201 tcttccgctt ccgtaccgcc cgcgcctgcg gtgatgtcga taaagcagtt gttcgggtcg
     1261 gcgggctggt tgaacatccg tttgaactcc aaatccgcca tctgtttttc cagccccgcc
     1321 acatcttcct gcacggcggc aaaaccttct tcgtcgtttt cttcgacggt catttcaatc
     1381 agcatgcggt tgtcttcgat gcccgtcgcg atgttgtcga gcgtcaacac gatgccttcg
     1441 aggattttgc gctctttgcc gatttcttgg gcgcgtttcg ggtcgttcca aagttcgggg
     1501 tcttcggaaa gaccgacaac ttcttccaat cggtctttct tgccctgata atccatataa
     1561 acgcggatgt cttcgctgcg cttttccaaa tcattcaggg tattgttgag ctggttgatt
     1621 acttcggctt ccatgattct tttgttcttt caaaatttta ggggcgtatt gtacgggatt
     1681 cgggtatttt tttctatgga taaagccttc tggaaacacg ttcggacggc atagcgtcaa
     1741 taacggtatg ccgccagttt gcgtttgatt tcaggcaatg cggcacgtgc tgcctcctca
     1801 cccaaccgga tggcgcgttt tttctgatcg aatccgccga ctgcacccaa atccaaaacc
     1861 tgcggtttga taaccacatc cgcctgcccc aactcatttt gcaacgcgga aacgctcatt
     1921 acgttcagcg tctgatcgaa ataagagaag aaaccttggc tgatgttttt gcccggacgg
     1981 gcggaaatat cgacggcaat cacgaaattc gccccctgcc gccgggcggc actgacgggc
     2041 acgggctgcg acagaccgcc gtcaacatat gtatgcctgc cgatgataac gggttggaac
     2101 acattgggaa tggcggcgga agcgcgcaca gcctgcccgg cattcccttg attgaaagcg
     2161 acggccttgc cggtttcaaa atcagtagca acagcggcaa atttgatggg aaactgctga
     2221 atccgcctgc cgccgacttt tcggttgatg taattttgca gcttttcgcc tttgataaaa
     2281 ccactggtgg acaaggttaa atcgactaaa tcggttttgc ctaaaatttc ggcttccaat
     2341 tcgaggcggt cgggcgacat acccgatgca aaaaggctgc cgactatcga acctgccgat
     2401 gtgccggtaa ccaccttcac aggaatacca ttttctttca aaaccttaat aatgcctaca
     2461 tgggcaaatc ctttagatgc gccgccaccg agtgccaaac cgaccactgc ggcgggtttg
     2521 gcggtttgca ccggcttgcg ggcagcatta tttcccgccg tgccgcaggc ggcaagcaac
     2581 gcggcggcgg cgattgccaa aagcggtctg atttttgaaa acgttaccat attttccatt
     2641 cctttatata tcgcaccccg tcaaaaagag ggattgcttt tcttaacaac cccctttgac
     2701 agccaagcaa atgggggctt tgttaagtca tcatcaaaat taatatttct ttttttcctt
     2761 tacggaaatt atatttgaag gcatactatc caaggcggga attatctcac aacaccgccg
     2821 ttatccaaat atcccgcctt tttcccttcc tttccatcaa aatactttct ttttatattc
     2881 attaacttgt taaatcattg gctgccgggt gtcagttttt ccgacaaaat ccgtctaatg
     2941 gggtatcaac agaaccaaaa caggaacact tatgaaaatc ggaacaactt ggcagacggc
     3001 atccgctatg ctggttttgc gtctgtttgc cgcatatgaa tttttggaat cgggtttgca
     3061 aaaatggaac ggggagaatt ggttttctga aatcaacgat caattcccat tcccgttcaa
     3121 cttgctgccg gacgcgttaa actggaatct cgccatgtat gcggagcttt tgctgcccgt
     3181 actgttgctt ttgggtttgg caacgcgtct gtcggcatta gggctgatgg tcgttaccgc
     3241 cgtcgcttgg gctgcggttc acgccggttc gggttacaat gtctgcgaca acggttataa
     3301 aatggcttta atttatatcg tggtattaat cccgctgctt ttccagggtg cgggcggatg
     3361 gtcgctggat acgctgctga aaaaacggtt ttgcccccaa tgccgtctga agcaagattg
     3421 attcagtcgt ggaatctgac tttaaacatt ccaaccttat ctcgttaact tgatattctg
     3481 aaaaggaaat agaaatgaac aaaaacattg ctgccgcact cgccggtgct ttatccctgt
     3541 ctttggccgc cggtgcagtt gctgccaaca aaccggcaag caacgcaaca ggcgttcata
     3601 aatccgccca tggctcttgc ggcgcgtcca aatctgccga aggttcgtgc ggcgcggctg
     3661 gttctaaagc aggcgaaggc aaatgcggcg agggcaaatg cggtgcgacc gtaaaaaaaa
     3721 cccacaaaca caccaaagca tctaaagcca aggccaaatc tgccgaaggc aaatgcggcg
     3781 aaggcaaatg cggttctaaa taatcccacc ccttcaaacc aagccgcgtt tttcagtaaa
     3841 atgcggcttt tttaacggca aacaaagatt ttttaacaag cacatcattc ttttgtgcca
     3901 tccgaaccgg gtaaaaatat gattcaacac gcaggcttgg gctaccgccg cgacttggcg
     3961 gaagactttc tctcgctttc cgaaaacagc ccgatatgct ttatcgaagc cgcaccggaa
     4021 aactggctga aaatgggcgg ctgggcgcgc aaacagtttg accgtgtggc ggaacggctg
     4081 ccgctggcgt tgcacggatt gtctatgtcg ctgggcgggc aagcaccgct ggatactgat
     4141 ttgatagacg gcatcaaaga aatgatgcgc cgttacgatt gcacgttttt ctccgaccat
     4201 ttgagctact gccacgacgg cggtcatctt tacgatttgt tgccgctgcc cttcaccgag
     4261 gaaatggtgc atcatacggc gcggcgtatc cgtgaagtgc aagaccgttt gggctgccgc
     4321 atcgccgtgg aaaacacgtc ctactatctg cattccccgc ttgccgagat gaacgaggtc
     4381 gagttcctca acgccgtcgc acgtgaggcc gattgcggca ttcatctgga tgtgaacaat
     4441 atctacgtca acgccgtcaa tcacggcctg ttgtcgccgg aggctttttt gaaaaacgtt
     4501 gacgcagatc gcgtgtgcta tatccatatt gccggacatg acgtggaaac gccggaattg
     4561 ttgattgata cacatggcgc ggcagttttg ccgactgttt gggacttgct cgaacttgcc
     4621 tatgccaagc tgccgacgat tccgcccacc ctgttggaac gcgattttaa tttcccgcct
     4681 tttgccgaac tcgaagccga agtcgccaaa atcgccgatt atcaaacgcg tgccggaaag
     4741 gaatgccgcc gtgcagcctg aaacctccgc ccaataccag caccgtttcg cccaagccat
     4801 acgcgggggc gaagccgcag acggtctgcc gcaagaccga ctgaacgtct atatccgcct
     4861 gatacgcaac aatatccaca gctttatcga ccgctgctat accgaaacgc ggcaatactt
     4921 tgacagcgaa gaatggagcc gtctgaaaga aggtttcgtc cgcgacgcgc acgcccaaac
     4981 gccctatttt caagaaatcc ccggcgagtt cctacaatat tgccaaagcc tgccgctttc
     5041 agacggcatt ttggcactga tggattttga atatacccaa ttactggcag aagttgcaca
     5101 aattccggat attcccgaca ttcattattc aaatcacagc aaatacacgc cctcccctgc
     5161 ggcctttatc cggcaatatc gatatgatgt taccgatgat ttgcaggaag cggaaacagc
     5221 cttgttaata tggcgaaacg ccgaagatga tgtgatgtac caaacattgg acggcttcga
     5281 tatgatgctg ctggagataa tgggttcctc cgcgctttcg tttgacaccc tcgcccaaac
     5341 ccttgtcgaa tttatgcctg aggacgataa ttggaaaaat attttgcttg ggaaatggtc
     5401 aggctggact gaacaaagga ttatcatccc ctccttgtcc gccatatccg aaaatatgga
     5461 aggcaattcc ccgggccaaa accatctatc cgcataaaat taccttgttc ccgatactat
     5521 gccgctaccc gacctgaccg atgccgaatt aatagagtcg cgtaaactgc ttctgcattt
     5581 tgcgcggctt cagttgcccg accaccctga tttggctgaa gatttagtgc aggaaacatt
     5641 gctgtccgca tacagcgcag gcgacagttt tcaaggcagg gcacttgtca acagctggct
     5701 ttttgccata ttgaaaaaca aaattattga cgcattacgt caaatcggaa ggcagaggaa
     5761 agtctttacc acactggatg acgagctact ggatgaagca tttgaaagcc atttttccca
     5821 aaacgggcat tggacgcagg aagggcagcc gcaacattgg aacactccgg aaaaatcatt
     5881 aaacaacaac gaattccaaa aaattctgca aagctgccta tacaacctgc ctgaaaacac
     5941 cgcacgggta tttaccctga aggaaatact cggtttttca tccgacgaaa tacaacaaat
     6001 gtgcggtatc agcacgtcca actaccacac cattatgcac cgcgcccgag aatcattgcg
     6061 ccaatgcctg caaatcaaat ggttcaacca agaaaacccg aagtaaacgt tatgaaaaaa
     6121 tgccgcgata tcgccctgct tctttccaaa catcaggacc gggaaaccac cccgggcgag
     6181 aagatttcca tatacacaca cctgctgttc tgtccgtatt gccgtgaata taaaagacaa
     6241 cttcaaacca tcaaaagatc actggcaaaa acaaccagaa cttcaaaata aatgccgtct
     6301 gaaaaggctt cagacggcat aagctgacgg aaacaaatca aaccgattta ctgttatctg
     6361 cagttcatcc ataatacaca cttcaaaagc agcatatttc cccatacgga atgtataaat
     6421 acgcaaaata cgaaggctgc atcaatttgc catatttgct ttatttgcct tatttcacag
     6481 acgacactcc ccctcccgcc caacccgttc tttctgaatg agcagatttc aatgattaag
     6541 gaaaccctaa tgcgcccaat cttcctatct ttcgttttac tccctatttt gataaccgcc
     6601 tgcagcacac cggacaagtc tgcccgatgg gaaaatatcg gcacaatctc aaacggcaat
     6661 attcatacat atatcaacaa agacagcgtg agaaaaaacg gaaatctgat gattttccaa
     6721 gataaaaaag ttgtgaccaa tctaaaacaa gaacgttttg ccaacacccc cgcatacaag
     6781 actgccattg ccgagtggga aatccactgc aacaacaaaa cataccgctt aagttcgcta
     6841 cagttgtttg atacaaaaaa cacggaaatt tccacacaaa gctacacagc ctcttccctc
     6901 cgcccgatga gcatcctgtc cggaacatta actgaaaaac aatatgaaac cgtatgcggg
     6961 aaaaaactct gattacaact tatgcacaaa cttatccata aaccttatta taaaaatgcc
     7021 gtctgaaata ctgaaatatc agcatttcgg acggcatttt gccatttccc cgaaaagtta
     7081 cccccaaagt tatccacatt attttttaaa ccagcttcca tccgaaatat agtggattaa
     7141 caaaaatcaa gacaaggcga cgaagccgca gacagtacaa atagtacgaa accgattcac
     7201 ttggtgcttg agcaccttag agaatcgttc tctttgagct aaggcgaggt aacgccgtac
     7261 tggtttttgt taatccacta taaactcgct atacaatttc actatccaaa cgtaaattgt
     7321 tccattgata cacaaaactg cttgccccca taattttgat aaagcatttc ttacattccc
     7381 ggctccgtcc cgtaaccaac acagcctcta aaaaataatc gcttgttttg acaccgatac
     7441 actcatatag tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacaaat
     7501 agtacggcaa ggcgaggcaa cgccgtactg gtttaaattt aatccactat acaaatacag
     7561 aaactcaaga aaataacctt gtgtattgac catctcaagc aattcagaaa aatcaagaaa
     7621 ttttctgacc gtaaacaaac gtttccctaa aaaaacgatg tcttcaaaaa tatcgaacaa
     7681 ataatcatct tcggcgtttt catttttatg ggttaaaaca acacgggaaa aatctgtttt
     7741 cagatgcttg cccgcttgat tgttcggatt attgtccgga acgacaaaac cgtcctcaaa
     7801 attaaagcag acgttgcgtc cttctacctt tatctctgtg caataacaat catgtagaga
     7861 aatgctatcc gaaaaatttt ttctttgtgt atgcaaaaaa agttttcatt caagtaccca
     7921 tatctaacac gagacctttg caaaattccc caaaatcccc taaattccca ccaagacatt
     7981 taggggattt tccatgagca ccttcttccg gcaaaccgca caagccatga ttgccaaaca
     8041 catcgaccgt ttcccactat tgaagttgga gcaggtgatt gattggcagc cgatcgaaca
     8101 ctacctgaac cgtcaaaaaa cccgttacct tagagaccac cgcggccgtc ctgcctatcc
     8161 cctgctgtcc atgttcaaag ccgtcctgct cggacaatgg cacagcctct ccgatcccga
     8221 actcgaacac agcctcatta cccgcatcga cttcaacctg ttttgccgtt tcgacgaact
     8281 gagcatcccc gattacagca ccttatgccg ctaccgcaac tggctggcgc aagacgacac
     8341 cctgtccgaa ttgctcaaac tgattaaccg ccaactgacc gaaaaaggtc taaaaataga
     8401 gaaagcatcc gccgccgtca ttgacgccac cattattcag accgccggca gcaaacagcg
     8461 ccaggccata gaagtcgacg aggaaggaca agtcagcggc caaaccacac cgagtaaaga
     8521 taaagatgcc cgttggacaa agaaaaacgg tttatacaga ctcggttaca aacaacatac
     8581 ccgtaccgat gaggaaggct atatcaagaa actgcacatc accccagcca atgcccatga
     8641 gtgcaaacac ctgtcgcctt tgctggaagg actgcccaaa ggtacgaccg tctatgccga
     8701 caaaggctac gacagtgcgg aaaaccggca acatctggaa gaacatcagt tgttagacgg
     8761 cattatgcgc aaagcctgcc gcaaccggcc
//
LOCUS       DBBZXW010000077         8680 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.077, whole genome shotgun sequence.
ACCESSION   DBBZXW010000077 DBBZXW010000000
VERSION     DBBZXW010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8680
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.077"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(249..977)
                     /gene="rmpM"
                     /locus_tag="ACJJD2_001587"
     CDS             complement(249..977)
                     /gene="rmpM"
                     /locus_tag="ACJJD2_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HGG7580087.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1341..2291
                     /locus_tag="ACJJD2_001588"
     CDS             1341..2291
                     /locus_tag="ACJJD2_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HGG7580088.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2404..3138)
                     /gene="fnr"
                     /locus_tag="ACJJD2_001589"
     CDS             complement(2404..3138)
                     /gene="fnr"
                     /locus_tag="ACJJD2_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HGG7580089.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3341..4762
                     /gene="hemN"
                     /locus_tag="ACJJD2_001590"
     CDS             3341..4762
                     /gene="hemN"
                     /locus_tag="ACJJD2_001590"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HGG7580090.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(5115..6689)
                     /locus_tag="ACJJD2_001591"
     CDS             complement(5115..6689)
                     /locus_tag="ACJJD2_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HGG7580091.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            7014..8114
                     /locus_tag="ACJJD2_001592"
     CDS             7014..8114
                     /locus_tag="ACJJD2_001592"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HGG7580092.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPGR
                     LRRKLLDLQDTGADELHRSRMLSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHSYSVQLADLPLLAERTQIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDKE
                     TRVVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGEKAAQGNI
                     LPQLLDRLLAHPYFARPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADARQMYICGGGIRNPVLMADLADCFGTRVSLRSTAELKLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            8233..>8680
                     /gene="mafA"
                     /locus_tag="ACJJD2_001593"
     CDS             8233..>8680
                     /gene="mafA"
                     /locus_tag="ACJJD2_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7580093.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTKNSGRKGERSAGLSVNG"
BASE COUNT         2194 a         2480 c         2105 g         1901 t
ORIGIN      
        1 cgtcgccttg tcctgatttt tgttaatcca ctataaagcg cggcaatggg acacaaacct
       61 gaatctgaat ccgaacctgc accccgattc tgacgatagc cgtttcagaa aaccacccaa
      121 aaaaacaaac cccgcaaaag cgggggtttg tttcacatca tcgatgccga ccgacgtttc
      181 acgaatattg caacagtacc tggtacaaaa tccactaacc tcatgcatcg gcaagatatt
      241 gcctagcctt agtgttggtg atgattgtgt gccggcacaa cctgacgggt tacgatgctg
      301 cggattttca catccacacg gcggtcaggt tcgatacatg caatcagagc ctcacgtttt
      361 ttggctttag agactttcgc acccagtttg gcaacttcgg cttcacaaac ttgagtcatt
      421 tgcgcttgag attcgcccaa gccgacagca gaaattctag aaacaggtac gccgttgctg
      481 accaggttgt ttgccactac gtatgcgcgg cgttcggaca gggcctgatt gtatttgtca
      541 gaacccataa agtcggtatg gccttcgacg cggacagatt ggatattggt ttgacccagg
      601 cgttgcgcca atactttcag gttgtcttga gcttcggcgc gcaatgaatc cttatcgaaa
      661 ccgaacaggg ttttggcaga cagggaaatg gtttcatcaa catattgcgg agcctgctcc
      721 acaacgacga caggagcggg tgcgggttcg ggttctggct cgggttcggg ggcagcaacc
      781 gcatcgccgc attctacgcg accttggctt gctttatcaa agtaggcgtt tttccagcat
      841 tcgccatagt tgttgcgtac gatttcgttc gactggccgc ttacggtgta accctgaacg
      901 gacgcctcgc ccgcaacagc agtgccggaa gcgagcaatg caacgaataa tgcgcttaat
      961 ttcagctgtt tggtcatttt attccctcat taaatttgta cagcagatac agaagcaact
     1021 gctgaattgc caacatacag gccgctgtag aaacatggcg gcaaatcgga tatttcagtc
     1081 tccactataa agaagcaggg ggaggactgt caatactcaa cgcctgaaaa caaccgtaaa
     1141 acagcctgtt tcctgatagt ctatcatgcc gaaaaatcaa ttccgtgtca ttactttagg
     1201 gggatttttt ccatatcgca cgattgccgt tgcacaaaaa caacaaacac aacggcaaag
     1261 ccccataccg taccggcaag aaaatatgat aaattataaa caatgttcag ccacccgaca
     1321 cagacccaca ccgacccgcc atgaaattac aacaattgaa atacgcctta gaagtttacc
     1381 agcacaacct gaacgtttcc gaagcggccg aagccttgtt tacttcgcaa cccggcatct
     1441 ccaaacaaat caaattgctg gaagaagaaa tcggcattca gatttttatc cgcagcggca
     1501 agcgcgtggt ttcggtctcg cagccgggca aggtggtttt ggatattgcg gaacgtattt
     1561 tacgcgatgt acagaacatt aaaaatatcg gcagcgagtt taccggacag gacagcggtt
     1621 cgctgacggt tgccacgacg catactcagg cacgctatgc cctacccttg attgttgccg
     1681 attttgtgaa acgctatccg aaagtcaacc tgaccatcaa acaggggagc cctgccgcca
     1741 tcgcacgtat ggttacctca ggcgaggcgg acttggcgat tgttacggaa cggatagacg
     1801 accatcccga actgggaaaa cttccctgct atgactggac tcatgcggtt atcgtaccga
     1861 acgaccaccc cttgctcgaa tgcagaaacc ccctccgcat tgaagatttg gcgaggtttc
     1921 cgctgattac ttatgaattt gcattcaatg cgggcagcag catcgcgcgg gcattttcca
     1981 aagcccgttt ggaacagccg gatgtcgcat tggcggcggc ggatacggac gtattgaaga
     2041 cttatgtgcg cttgggtttg ggcgtgggac tgatggcgaa aatggcgtac aacccggata
     2101 cggacggcga tttgcagctt gtggatgcgg cacacctgtt cgagccgtcg ccgacgtgga
     2161 ttgctttgcg cagcgatact tatttgcgcg gatatgccta cgactttatc caagcgtttg
     2221 cgccgcacct gacacgcgag aaggtggata ggattctgta cacgcccatc agcgaggatt
     2281 tttcgattta ggcggctgcc ggttttcaga cggcactttg cggcagatac aacaaacagg
     2341 acagatgttt tcgtctgccc tgtgtttatt gagaatgccg tctgaaatgt tcgtacgggt
     2401 taatcaaatg gcgtgcgaac aaccggatac catcttcttc aacacctgca gattgaggat
     2461 cttgatgtgt ttgtgttcga cggaaatcaa tccttcctga tgaaatttag ataatgtgcg
     2521 gctgacggtt tcaagtttca gcccgagata actgccgatt tcttcgcggg acattcttaa
     2581 gatgaagtcg ttggcagcaa aacctcggga ataaaggcgt tgggaaaggt tcaacagaaa
     2641 ggcggcaatc cgctcttcgg cgcgcatatt gcccaacagc agcataacac cttggtcgcg
     2701 cacgatttca cgactcatca tgcggaaaaa gtgggtacgc aggctgggga tattctgccc
     2761 cagttcttcg atgtgggtaa acggcagttc gcacacttcg ctgtcttcca aggcgaccgc
     2821 gtcgcaactg tgcacatggg aacagatgcc gtccatgccg atgagttcgc ccgacataaa
     2881 gaaacccgtt acctgatcgc ggccgtcctg actggcgacg gttgttttga agaagcccga
     2941 acggatggca aagagcgagg taaaggcttc gccgacacag aacaggtatt cgcccttttt
     3001 caggcggcgg ctttgacgga tgacggcatc gagttggctg agctcgttgg gcagcagccc
     3061 gacaggcagg cagagttccc gcaaagaaca ggaagaacac agcgttttca tctgatgtgt
     3121 agtattatgc gaagccatac cgtacctttt tgtgcgcttt gccccatcat gattatagtg
     3181 gattaaattt aaaccagtac ggcgttgcct cgccttgtcc ttatttaaat ttaatccact
     3241 atatgtgctt attgacacat atcaagacag gtttatcata ctgtggcatt ctaccaaact
     3301 atccaaaatt tgactaacat cataaaaccg cacacacacc atgaaaatca ttcagataca
     3361 gaacaatcac aatgtaaacg atgaccgccc cgagtttgac cgcgcgctga ttgccagcct
     3421 gcccgccagc ggcccgcgct acacttccta ccctaccgcc gaccgtttcc atgacggttt
     3481 ccgcgaaggc gaatatatca aagctttaca tttgcgcggt atgggcgcgt taaacaaacc
     3541 gctttccctt tacattcaca ttccgttctg caacaccatc tgctactact gcggctgcaa
     3601 caaaatcatc accaaagaca aaagccgcgc cgatgcctac atcgaatatc ttgaaaaaga
     3661 aatggaactg ctcgctccac atctgaacgg acggcaccag cttgcccaac tgcacttcgg
     3721 cggcggcacg ccgacctttt tgagcgacga acagatcgaa cgtgtcttcc gcatgatacg
     3781 caaacatttc gagttaatcc ccaccggcga atactccatc gaaatcgacc cgcgcaaagt
     3841 cagccgcgac accgtcctca tgctcggcag actcggcttc aaccgcatga gcatcggcat
     3901 tcaggatttc gaccccaaag tgcaggcggc ggtcaaccgc atccaaagtt acgaagaaac
     3961 caaagaagtc atcgatgcgg cgcgcgaagc ggggttcaaa tccgtcagcg tcgatttgat
     4021 ttacggcctg ccgcaccaga cttcggaaag catcaaaacc accatcgata ccgttttgtc
     4081 gctcgatccc gaccgcctcg ccctttatca ctacgcccac ctgccgcacg tgttcaaacc
     4141 gcaacgccgc atcgataccg ccgccgttcc cgacagcgaa gagaagctcg atatgctgca
     4201 atactgcgtc caaaccctaa ccgaacgcgg ttacgtcttc atcggcatgg accatttcgc
     4261 caaacctgac gacgaactct ccatcgccct caaagaaggc ttcctccagc gcaacttcca
     4321 aggctattcg acctacgcgg attgcgattt ggtcgccatc ggcgtgtcgt ccatcggcaa
     4381 aatcggcagc acctattccc aaaacgaacg cgacatcgat gcctactatg ccgccatcga
     4441 cgaaggcaga ctgcccatca tgcgcggtta tcagctcaat caggacgaca tcctgcgccg
     4501 caacatcatt caggatttga tgtgccgctt cgcgctcgac tatcggattt acgaaagtat
     4561 gttcggcatc ccgttcgacc gctacttcaa agacgaactg gcggatttgg aaaaactcgc
     4621 cggtttggga ttggtgcgcc tgaacagcca cgggctgacc gttaccccga aaggacgctt
     4681 cctcatccgc aacatcgcca tggtcttcga ttaccacctg cgccacaaag aaaccaaggc
     4741 gaaatattcg caaacggtgt gattgcgtct aacgtacaaa tgccgtctga aaggcttttt
     4801 cagacggcat tttgctgccg gcaggataag tgttttcaag aacaggcggc ggcatatcat
     4861 aacgttccgc acctttgtgt ccgaccgttc cgaaaccaag atatagtgga ttaacaaaaa
     4921 ccagtacagc gttgcctcgc cttgccgtac tatctgtact gtctgcggct tcgtcgcctt
     4981 gtcctgattt ttgttaatca ctataccaaa cggcatatcc cgacagaaca gattgcgcat
     5041 aaggcacaag cccgcacatt ccatcaacaa aatgccgtct gaacacgggt tcagacggca
     5101 tcagtatttt acaatcagaa tactgcctgt aaaaccaagt agcagacaac cgacaatacg
     5161 gcggcggcag gcagggtaat gacccacgcc aaaccgatgg gcttcatcag tttccaattg
     5221 gcattacggt tgaccagacc gataccgagt accgcgccga ccaagatatg cgtactggac
     5281 acgggcagcc ccatcagcga cgcgcccatc acgacagatg cggcggacag ttcggcagta
     5341 aaacccgagg cggggtgcat ttccgccaaa ctcgtaccga cggttttaat cacctcttta
     5401 ccgacaaacc acaaaccgac aatcagcgcg ataccgaaag tcagcatcgc aatcgggggg
     5461 acgacatttt gcgcggcaac gctgttggta cgcaaaacat ccataatcgc ggcaaacgga
     5521 ccgatggcgt tggcgatatc gttcgccccg tggctgaatg cgaagccgca ggcggtaaag
     5581 acctgcatcc atgaaaacat ctgaaaggtc gatttgccca agtctttacg cttgaggctt
     5641 ttggcaaaaa caaacgtccc catccacacc gccgcgccta tcataaagat ggtcaggaag
     5701 ctgttgacgt tgctcatccc caaatgcagg tttttcaagc ccttgaaaat cagcatagcg
     5761 gaaatcatca tcgcgccgaa cgaagcgata aagggaatcc aagaatgcag cgctttgtag
     5821 gaatcgacat tgtttttacg gttgtcgaac gcataaagac cgcggtaata ctccgattgc
     5881 agctcttgcg gatcgaattc gggttcgtcg taaatttgcg cgtcgtgcgc cattttggtg
     5941 gcgtactcga ctttttcggc ttcggacaaa ccctcgaaaa acaggcggtg ccgttcttta
     6001 taggcctttt tttcctgctt gatgcccttg agcgtgcctt ccgcccaagc gttgtaatct
     6061 aagacgtttt tcttgacgcg cgaaaacagg aaataggaca ccgcgccgcc caacacgggc
     6121 gacaataccc aagaaacacc aataccgccc agcttgcccc aacgtatcaa atcgcccgat
     6181 gcggcatcgt tcattaccgc catacatacc gcgctgccga caatgccgcc gataatggaa
     6241 tgggtggtag ataccggaag cccttttttc gaggcaaaca acagccacaa cgccgccgcc
     6301 aaaagcgcgg acatcataat aaacacaaac tgtatgggtt cgaaatcaac acccttcaaa
     6361 tcgacgatgc ctttgcgtat ggtattggtt acctcaccgc ccgcgatgac cgcgccgctg
     6421 acctcaaata ccgccgcaat cagcaaagcc tgcgggatgg tcagcgtacc cgcaccgacg
     6481 ctggtgccga aagaattggc aacatcgttg ccgccgatgt tgaacgccat aaacacgccg
     6541 aacatcgtgg caataatgaa taaggcggcg taattgtaat gggtataacc caagccccaa
     6601 taaataaaat agccgactgt acctaccagc atggcggcaa agacggcgtt gatggtttta
     6661 acatttgcgc tcatttggat ttgagccatg gcaatcttcc tttaatgtgg tggaaatcat
     6721 gagtgttgcc gacactgtac tgctgcctcc ggtcgaactg ccgtttcggg atatggcaga
     6781 cgcatccttc cttctgaacc gcatccgaat acccccaaac ctgaccgaat gcaaaactgc
     6841 tgccggaaac ggtttgtatg acacttctac tactggatgt tgcgggcgca ttataatatt
     6901 tttccatccg tcttgaaaca tttatttaca ctttatttac actgcggcgg caaatcagta
     6961 tacgagcgtc aatacacgtt aaaatggcgt tttgcaccag tttgggagtg atgatggaaa
     7021 cacagcttta catcggcatc atgtcgggaa ccagtatgga tggggcggat gccgtgctgg
     7081 tacggatgga cggcggcaaa tggctgggcg cggaagggca cgcctttacc ccctaccccg
     7141 gcaggttacg ccgcaaattg ctggatttgc aggacacagg cgcggacgaa ctgcaccgca
     7201 gcaggatgtt gtcgcaagaa ctcagccgcc tgtacgcgca aaccgccgcc gaactgctgt
     7261 gcagtcaaaa cctcgcgccg tccgacatta ccgccctcgg ctgccacggg caaaccgtca
     7321 gacacgcgcc ggaacacagt tacagcgtac agcttgccga tttgccgctg ctggcggaac
     7381 ggactcagat ttttaccgtc ggcgacttcc gcagccgcga ccttgcggcc ggcggacaag
     7441 gtgcgccgct cgtccccgcc tttcacaaag ccctgttccg cgatgacaaa gaaacacgcg
     7501 tggtactgaa catcggcggg attgccaaca tcagcgtact cccctccgac gcacccgcct
     7561 tcggcttcga cacagggccg ggcaatatgc tgatggacgc gtggacgcag gcacactggc
     7621 agttgcctta cgacaaaaac ggtgaaaaag cggcacaagg caacatattg ccgcaactgc
     7681 tcgacaggct gctcgcccac ccgtatttcg cacgacccca ccccaaaagc acggggcgcg
     7741 aactgtttgc cctaaattgg ctcgaaacct accttgacgg cggcgaaaac cgatacgacg
     7801 tattacggac gctttcccgt tttaccgcgc aaaccgtttt cgacgccgtc tcacacgcag
     7861 cggcagatgc ccgtcaaatg tacatttgcg gcggcggcat ccgcaatcct gttttaatgg
     7921 cggatttggc agactgtttc ggcacacgcg tttccctacg cagcaccgcc gaactgaagc
     7981 tcgatccgca atgggtggaa gcagccgcat ttgcgtggtt ggcggcgtgt tggattaatc
     8041 gcattcccgg tagtccgcac aaagcaaccg gcgcatccaa accgtgtatt ctgggcgcgg
     8101 gatattatta ttgagcgcaa ataccgtctg aaagccattt ccgccgctca gacggcattt
     8161 ttgcctcttt cgtttacaaa cccttaaaat ccatttacac tcaaactcgt tcaaaacaaa
     8221 acaaaccctg ccatgaaaac cctgctcctc ctcatccccc tcgtcctaac cgcctgcggc
     8281 acactgaccg gcatacccgc ccacggcggc ggcaaacgct ttgccgtcga acaagaactc
     8341 gtcgccgcat cgtcccgcgc cgccgtcaaa gaaatggact tgtccgccct gaaaggacgc
     8401 aaagccgccc tttacgtctc cgttatgggc gaccaaggtt cgggcaacat aagcggcgga
     8461 cgctactcta tcgacgcact gatacgcggc ggctaccaca acaaccccga aagtgccacc
     8521 caatacagct accccgccta cgacactacc gccaccacca aatccgacgc tctctccagc
     8581 gtaaccactt ccacatcgct tttgaacgcc cccgccgccg ccctgacgaa aaacagcgga
     8641 cgcaaaggcg aacgctccgc cggactgtcc gtcaacggca
//
LOCUS       DBBZXW010000078         8578 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.078, whole genome shotgun sequence.
ACCESSION   DBBZXW010000078 DBBZXW010000000
VERSION     DBBZXW010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.078"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..311
                     /locus_tag="ACJJD2_001594"
     CDS             <1..311
                     /locus_tag="ACJJD2_001594"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580094.1"
                     /translation="DTTLVLVSVISSFFSSREYIDSRRQVLDTAFSYKSDGRMVLFKS
                     IKQESISFLSEDLKKDWMFHKVKTGEKDGYGSDEMLSVPRVYLEMMSRKTGVPYSSIL
                     "
     gene            complement(758..1120)
                     /locus_tag="ACJJD2_001595"
     CDS             complement(758..1120)
                     /locus_tag="ACJJD2_001595"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HGG7580095.1"
                     /translation="MKAARRQLYYTFANRIAEQSRIICIKKLNLLNLQCIQIEVNKLH
                     QKIVAPSPLLHTLKEGVAKNGVHIEEIKANATSQSCYSCGRLNKRIGVAATRTNMVCE
                     GFGRHYDTDENASSNIRK"
     gene            1493..2920
                     /locus_tag="ACJJD2_001596"
     CDS             1493..2920
                     /locus_tag="ACJJD2_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7580096.1"
                     /translation="MKISRPLEFTLLQQEYMQHLTERMTQIAKLLNSSANNPDIDIPD
                     FLTEIKDYSEFSVTDENGTYLHWDKFRQIHTEDTRMKWRAVKESRKKIQKPIDFPFEH
                     QFWFCIPDSLQARLHLIDKSCGSSIGTSSLGGFGRSEQNRFLLKSLIMEEAITSAQLE
                     GAATTRKVAKDMLKSQRKPKTKDEIMIVNNYHLMKKAVELKNTPLSVEMILDLHRIAT
                     SNAIENKADPGQFRRDDEIFIADNDGNSLYQPPPHGQVHTLMEAVCTFANNTYDGVEN
                     PFIHPVVQAIILHFLIGYIHPFGDGNGRIARALFYWFMLKNSYWLFEYISISRLLKNA
                     PAQYAKSYLYAETDDSDLTYFIYYQCDIIKRAVADLEHYISDKQKHQQEFKAAIAQYT
                     EKIGKLNQRQIGILQKAVEESGKIFTALEIANQYGISLNTARSDLSKLGEYRFLVPFK
                     SGNALEYVAPQDLLERLEKKNSLLA"
     gene            3309..3773
                     /locus_tag="ACJJD2_001597"
     CDS             3309..3773
                     /locus_tag="ACJJD2_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580097.1"
                     /translation="MLHIPPTEPDRYVSSIVALNVHSSNGTGDWHSAAALNDDAYPQD
                     FYIYGKDQTRSTLHLLGNVGVIDGTNRFNEMGYYPENIPVWLADHPRACVDYLYTAVL
                     QTGSIGRVILDDWFPSDEDKQSVYDLLNQIEPHLNTQEWENLQLWKRKNPIM"
     gene            3900..5189
                     /locus_tag="ACJJD2_001598"
     CDS             3900..5189
                     /locus_tag="ACJJD2_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HGG7580098.1"
                     /translation="MMKSILTVSGNRMRKPRITHLDVWANDERIGTLEKGAMYRFTYD
                     NPGSPLLGLHYQDRGKVYISNNMPHIFAQYFPEGFLDAHITSKYAFHDAPFEDNEMLR
                     LAILGRETLGRIHVRCNDPLFNEWIDGLEMKNPRILTERDLLGINARQVFQQYMAEIF
                     HHGRFVSVSGIQQKMSLDAISRNTKQTASYIAKGFDASEYPCLAANEFLCMQTIKQAG
                     IPVAQTSLSEDSSVLLVRRFDVSEQEYFLGMEDFTSLRQYSAEDKYKGSYAAIAQIIR
                     QISGRPDEDLIHFFNQLAASCILKNGDAHLKNFSVLYHDEYDVRLAPTYDVLDTSIYR
                     VGTQGIFDAYDDTLALNLTNHGKKTYPSKNTLLDFAEKYCDLGREDASFMIDTIVQAK
                     EQVLVKYSDVLRENEWLAQKWHFIPDENEEGLPFTFR"
     gene            complement(5526..7313)
                     /locus_tag="ACJJD2_001599"
     CDS             complement(5526..7313)
                     /locus_tag="ACJJD2_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HGG7580099.1"
                     /translation="MKLPLSYLPNIRFLSWCCLLAGIIAPATLLASPNPAEIRMQQDI
                     QQRQREEQLRQTMQPESDVRLHQKNTGETVNQLMGDDSSQPCFAINEVVLEGEHHDRF
                     QFALKRALRETGFQAGKCLHAGNINQIMSLAQNALIGRGYTTTRILAAPQDLNSGKLQ
                     LTLIPSYLRSIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLEQGLENLKRLPT
                     AEADLQIVPVEGEPNQSDVVVQWRQRLLPYRVSVGMDNSGSEATGKYQGNITFSADNP
                     FGLSDMFYVNYGRSIGGTPDEESFDGHRKEGGSNNYAVHYSAPFGKWTWAFNHNGYRY
                     HQAVSGLSEVYDYNGKSYNTDFGFNRLLYRDAKRKTYLGVKLWTRETKSYIDDAELTV
                     QRRKTAGWLAELSHKEYIGRSTADFKLKYKRGTGMKDALRAPEEAFGEGTSRMKIWTA
                     SADVNTPFQIGKQLFAYDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLSAERG
                     WYWRNDLSWQFKPGHQLYLGADVGHVSGQSAKWLLGQTLAGTAIGIRGQIKLGGNLHY
                     DIFTGRALKKPEFFQSRKWASGFQVGYTF"
     gene            complement(7368..7826)
                     /locus_tag="ACJJD2_001600"
     CDS             complement(7368..7826)
                     /locus_tag="ACJJD2_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HGG7580100.1"
                     /translation="MPIISTLNILSPKLYPSEPYNESEALGAITWLWYQSPTHRQVPI
                     VEMMTYILPVLKNGQFALFCKGTQPIGYISWAYFDEVAQAHYLESDRHLRDNSDWNCG
                     DNIWLIQWFAPLGHSHQMRSAVRQLFPSTTVRALYHKGSDKGLRILTFKT"
     gene            complement(7992..8327)
                     /locus_tag="ACJJD2_001601"
     CDS             complement(7992..8327)
                     /locus_tag="ACJJD2_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580101.1"
                     /translation="MKQILFKYFMLITCVFGLSSCGYLLSFGQLMFDGSCADWNCSKP
                     TPRWRKAVDDCENRNLEIIKQRFGYKDYAEVIFSEVGQQIQIPYQCRQSNGGYDIRKD
                     KQYGHLFVQ"
     gene            complement(8308..>8578)
                     /locus_tag="ACJJD2_001602"
     CDS             complement(8308..>8578)
                     /locus_tag="ACJJD2_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7580102.1"
                     /translation="NNTTQGACKGLCYSHSSYFAEVPEQYQRDENGNIKMENGKPVET
                     ENWEDYTKKWGIPKTGADGKYINHAIPKLVNPNNPNGEKYETNPF"
BASE COUNT         2493 a         1801 c         1787 g         2497 t
ORIGIN      
        1 cggatacgac cttagttttg gtatccgtaa tatcatcatt tttttcgtca agggagtata
       61 tcgactctag aagacaggta ttagatactg ccttttctta caagagtgat ggtaggatgg
      121 ttctcttcaa gtcaatcaaa caggaaagta tttcttttct gtctgaagat ttgaaaaagg
      181 actggatgtt tcacaaggtt aaaactgggg aaaaagatgg atatggttca gatgaaatgc
      241 tgagcgtacc ccgtgtctat ttggaaatga tgtcgcggaa aacgggagtc ccctactcca
      301 gtattcttta aagtctaagt agaagacttc ttcgtcggtc tttttttgtt gtttggtttg
      361 catggagtaa aactgtacaa ctgttgaagc ataaaaccag caagaaggta aaaaagaaag
      421 aagcagttct ttggatttta gatgttaccg caattagttt cctttcctaa aatttgttta
      481 aattatttgc aatattaata taaacgagat attaatgatg agaaatcaaa aaggcatact
      541 aaatacaatt tgtacaaaat aattgcagta tttaaaaatg ttgattcgta tatgaaaagt
      601 taaaaatgcc aaaatgtaca gttgctaaac tgtaaaactg ctaaagcaac aaaacataaa
      661 aaggaatgca gggatgcaat cactacatct ttttattccg taagcattta tgactttacg
      721 gtcaactgct actctatgtg cctagctttt cagctcccta ttttcgaata ttggacgagg
      781 cattttcatc agtgtcgtaa tgccggccga aaccctcaca aaccatattg gttcttgtgg
      841 cagcaacacc tatccgtttg ttcaagcgac cacaagagta acatgattgg ctggtggcat
      901 tggctttaat ctcttcgata tgaactccat ttttagctac accttctttc agcgtatgca
      961 acagtgggga tggggcaact atcttctggt ggagtttgtt gacttcaatc tgtatgcact
     1021 gtaggttgag cagattcagt tttttgatac agattatccg gctttgttcg gcaattctgt
     1081 tggcgaacgt atagtagagc tgtcgtcttg ccgctttcaa tttgcggtag gtattttacc
     1141 attccatacg tagccgctcg gtacgtttga gccaaatggt atcttcgcca tttgtaccaa
     1201 ttggttttta cattaggctg tgttttagta atttattaat ttcaattatt tgcaagggaa
     1261 aagacaatta ttttccggtt aggaataaac ctatcctgtt gaatacctta aagccaaata
     1321 cgcctatcaa caccatatta aaacacagcc ttttttaata tagtagacac aatctttccc
     1381 tatttatgaa ggtgatcgct tctttctgat tcgtatttta atgcttccta tttttataaa
     1441 aattgactag aatagctcaa ttattaaaaa ttgcgcgatt ttggtattta tcatgaaaat
     1501 ttccagacct ctggaattta ccctgttgca acaggaatat atgcagcatc tgactgaaag
     1561 aatgactcaa attgccaagc tgctgaattc ttccgcaaac aatcctgata tagacattcc
     1621 cgattttctt actgaaatca aagattattc agaattttcc gtgacagatg aaaatggaac
     1681 ctacctgcat tgggacaaat tccgccagat tcacacggaa gatacgcgga tgaaatggcg
     1741 cgccgttaag gaaagccgca aaaaaatcca aaaaccaatt gatttcccgt ttgaacatca
     1801 gttttggttc tgcattcccg actctttgca ggcacggctt catttgattg acaaaagctg
     1861 cggcagttct atcggcacgt ctagcttggg tggcttcggc agaagcgagc aaaacagatt
     1921 cttgctcaag tctctgatta tggaagaagc gattacatcc gcccaactgg aaggtgcggc
     1981 taccacgcgt aaagtggcca aggatatgct caaatcgcag cgtaaaccca aaacaaaaga
     2041 cgaaatcatg atagtgaaca actatcactt gatgaaaaaa gcggtagaat tgaaaaatac
     2101 gccgttaagt gttgaaatga ttttggattt gcaccgcatt gctaccagca acgctattga
     2161 aaacaaggcc gaccccgggc aattcaggcg ggacgacgaa atctttatcg ccgataacga
     2221 cggcaacagc ctgtaccaac caccgccaca cgggcaggtt catacgctga tggaagcggt
     2281 atgcacgttt gccaacaaca cttatgacgg cgtggaaaat ccgtttatcc atccggttgt
     2341 ccaagctatc atcctgcatt tcctgattgg ctacatccat ccgttcggag atggcaacgg
     2401 gcggatagcg cgggctttgt tctattggtt tatgctcaaa aacagctact ggctgtttga
     2461 atacatatca atcagccgtc ttctgaaaaa cgctccggcc caatacgcca aatcctattt
     2521 gtatgcggaa actgacgatt cagatttaac ctatttcatc tattaccaat gcgatattat
     2581 caagcgggcg gttgccgatt tggagcacta catttccgac aaacaaaaac accaacagga
     2641 attcaaagca gcgattgccc aatatactga aaagatagga aagttgaacc aacggcaaat
     2701 tggtatcctg caaaaagcag tggaagaaag cggaaaaatc tttactgcac tagaaattgc
     2761 caaccaatac ggcatctccc tgaatactgc ccgtagcgat ttgagcaaac tgggagaata
     2821 tagattccta gtaccgttca aatcaggaaa tgctttagag tatgttgctc ctcaggattt
     2881 attggaaagg ttagaaaaaa aaaatagttt gctagcctaa aatgcagctt taaccgagtc
     2941 aaaatcaatg cagtccgcac ctttaaaaag aagctgcgga ctgcttgctt tttgctctac
     3001 aaatgatctt tgtagctgat ttaaccaaga ttgtagcaat tttgctttcc aagcaagcag
     3061 ggttagaaaa ttcgatactt ttaattattg gctgtgtttt aatatgatgt tgataggcgt
     3121 gtttggcttt aaggtattca acaggatagg tttattccta accggaaaat aattgtcttt
     3181 tcccttgcaa gtaattgaaa tcaacagatt actaaaacac agccttacat tattggggtg
     3241 actatcctgt aaaatatgtc ctaaaacgtg gaaaccactt ttgctctgct aaattttaag
     3301 gaatctttat gttacatata cccccaacgg aacctgatcg atatgttagc agtattgtag
     3361 ccttaaacgt gcatagttct aacggtacag gcgattggca cagtgcagca gcccttaatg
     3421 atgatgctta cccccaagat ttctatattt atggcaaaga tcaaacacgt agcacgttac
     3481 atttgcttgg taacgttggt gtgattgatg gaacaaaccg cttcaatgag atgggctatt
     3541 atcctgaaaa catcccagtt tggctcgcag atcacccccg tgcttgcgtg gattatcttt
     3601 acacagcagt gttacaaact ggctcaatcg gtcgggtgat tttagatgat tggtttccaa
     3661 gcgatgaaga caagcaatca gtttatgact tacttaacca aatcgaaccg cacttgaata
     3721 ctcaagaatg ggagaattta cagctatgga aacgcaaaaa cccaataatg taatgctaac
     3781 cgaacgagat aaaaggcacg agaagcggta ttactgaatt tcatccgcaa tacgccatgt
     3841 acaattaaat cagcagatgt gtctaaacgt accgctgttc ccgtttgaaa gaaattttca
     3901 tgatgaagtc tatcctcacc gtatccggaa atcgtatgcg taaacccaga atcacccatt
     3961 tggatgtttg ggcaaacgat gaaagaatcg gtactttgga aaagggggca atgtaccgtt
     4021 tcacatatga caaccccggt tctccattgt tgggtttgca ctatcaggat aggggtaaag
     4081 tatatatcag caacaacatg ccgcatatct ttgcacagta ttttccggaa ggctttttgg
     4141 atgcacacat cacaagcaaa tatgcttttc atgatgcgcc ttttgaagac aatgagatgc
     4201 tgcgcttggc aattctgggc agagagactt tgggtcggat acatgtgcgc tgtaatgacc
     4261 cgctttttaa tgaatggatt gacgggttgg agatgaaaaa tccaagaata ttgactgaac
     4321 gggatttgct gggcataaat gcccgacagg tttttcagca atatatggca gaaatcttcc
     4381 atcacggtcg tttcgtcagt gtatccggga tacagcagaa gatgtcctta gatgccatca
     4441 gcagaaatac caagcaaact gcctcatata ttgccaaagg ttttgatgca tccgaatatc
     4501 cttgcttggc tgccaatgaa tttttatgca tgcagaccat caaacaagca ggtattccgg
     4561 ttgcacaaac cagcctgtcg gaagattcat cagtcttatt ggtacgtcgg tttgatgtca
     4621 gtgaacagga gtatttctta ggcatggaag actttaccag tctgcgtcag tattcagcag
     4681 aagataaata taaaggcagt tatgcggcta ttgcacagat tatccgacag atatccggca
     4741 ggcccgatga agatttaatc cattttttta accagcttgc cgccagttgc atattgaaaa
     4801 acggggatgc acaccttaaa aatttttcag tactctatca tgacgaatac gatgtacgtc
     4861 ttgcacctac ctatgatgta ttggatacat caatatacag ggttggaaca caaggaattt
     4921 ttgatgctta tgacgatacg ctggcattaa acctgactaa ccacggtaag aaaacatatc
     4981 cttccaagaa tacattgttg gattttgctg agaaatattg cgatttggga agagaagatg
     5041 catcctttat gatagataca atcgttcaag ctaaagaaca ggttcttgtt aaatactcgg
     5101 atgtattgcg tgagaatgaa tggttggcgc agaagtggca ttttatcccg gatgaaaatg
     5161 aagaaggtct accgtttaca ttccggtagc tgccgggttt gaaccggctg tcagagatgg
     5221 ccggtcgact ttcaccctga aaatcacttc atcttatggt gtttgaaacc gagaaattag
     5281 aagaatcgta ttcggtagga gatatactag gaagattgga aaactggtaa atcattctat
     5341 tgattgagtt ggcggcctat atgtttaatg taggcaaacg agaaggaatc atgtatttca
     5401 tgattccttc ttaaattcct gtgtcaatct aagatcaaaa cacagccatc tcttaccata
     5461 atcatgatag gtgttttatt atgaaaagct atatctataa ttaccgttga tttgactatg
     5521 ccgttttaaa acgtatagcc tacctgaaaa ccgcttgccc atttccttga ttggaaaaat
     5581 tcgggctttt tcaatgcgcg gccggtaaat atatcgtaat gcaggttgcc gccaagcttt
     5641 atctgcccgc gtatcccaat tgctgtgccg gctagagttt ggcccaataa ccatttggcg
     5701 gattgtcctg aaacatgtcc tacatcagcc ccaagataaa gctgatggcc tggtttaaat
     5761 tgccagctca aatcgttgcg ccaataccat ccccgctcgg cagacaaact catttcaccg
     5821 tcgaagccac gtacggtgtg gtgtccgccg atagccagtt tgtcttgcga tgttagcggg
     5881 gttttgttcc attgtgcatg aacggatgtg tcataggcaa atagctgttt accgatttga
     5941 aaaggagtat ttacatcagc cgatgccgtc caaattttca tacgtgacgt gccttctcca
     6001 aaggcttctt caggcgcgcg cagagcatct ttcatgccgg tgccgcgttt atatttcaac
     6061 ttaaaatctg ccgtactgcg gccgatatat tctttgtggg aaagttctgc caaccaaccc
     6121 gcagttttac gccgttgtac agtcagttcg gcatcatcaa tgtaactttt tgtttccctc
     6181 gtccacagtt ttacaccaag ataggttttg cgtttggcat cacgatacaa caggcggttg
     6241 aagccgaaat cagtattgta actttttcca ttatagtcat agacttccga taatccggaa
     6301 accgcctgat ggtaacggta gccattgtga ttgaatgccc atgtccattt accgaaaggg
     6361 gctgaataat gtacggcgta attgtttgat ccgccttctt tgcgatggcc gtcaaaactt
     6421 tcctcgtcgg gcgtaccgcc aattgaacgt ccataattta catagaacat atcactcagt
     6481 ccaaaaggat tgtcggcaga gaaagtgata tttccttggt attttcctgt cgcctcacta
     6541 cccgaattat ccatccccac actcacacgg tagggcagca gacgttgccg ccattgcacc
     6601 acgacatcac tttggtttgg ttctccctct acgggaacga tttggagatc ggcttccgca
     6661 gtcgggagac gtttgagatt ttccagtcct tgttccaaat cacgcagatt caacagatcg
     6721 ttcgagcggg tgggaaattt gttctggaat gctgcaatac gtcctgcatg ggtttgatca
     6781 tcgttagacc gatcgattcg tatggagcgc agatagctcg gtatcagggt taattgaagc
     6841 ttgccactat tcaaatcctg tggcgcagcc aagatacggg tcgtggtata tcccctgccg
     6901 atcaaagcat tttgtgctaa ggacatgatt tgattaatgt tgcccgcatg cagacacttg
     6961 ccagcctgaa aacccgtttc gcgcaaggca cgttttaggg caaactgaaa ccgatcatgg
     7021 tgttcacctt ccaacaccac ttcgttaatg gcaaaacacg gttggctgct gtcatcgccc
     7081 atcaactgat taaccgtttc ccccgtgttt ttttgatgca aacgcacatc gctttcaggc
     7141 tgcatggttt ggcgcaactg ctcttcgcgt tggcgttgct gaatatcttg ctgcatacgg
     7201 atttcggcag ggttggggga agccaacaaa gtagcaggag cgatgatacc tgccaataag
     7261 cagcaccaag acaaaaagcg aatattaggc aaataggata aaggaagttt catggcatgg
     7321 tcgcaaaatc aataaaatca tcaatgggca ttcaatacac gattgcatca agttttaaaa
     7381 gttaaaattc tcaaaccctt atcgctccct ttatgataca aggcgcgtac tgtcgtacta
     7441 ggaaataact ggcgcacagc tgagcgcatt tgatgactgt gtcccaatgg cgcaaaccat
     7501 tgaatcagcc aaatattgtc gccacagttc caatcgctgt tgtcgcgcaa atggcggtca
     7561 gattctaaat aatgcgcctg cgccacttca tcaaaataag cccatgagat ataaccgatt
     7621 ggttgggtac ccttgcaaaa caaagcgaac tgcccgtttt ttaacacagg caatatatac
     7681 gtcatcatct ccacaatagg tacttggcga tgcgtaggcg actgatacca tagccaagtg
     7741 atggcaccga gtgcttcgct ttcgttatat ggctcactgg gatagagctt gggtgagagg
     7801 atgtttaggg ttgagatgat gggcatattt taagttaggg ttggtgttgg ttaaaacaaa
     7861 aaatggtttc agcctgaaat gaaacatttc acgttaaaac atagctttag catacgagac
     7921 tgaattgtag ggggcaataa gcaacgaccc taccattcaa caattctcgt taattgcaca
     7981 ggttacgctg gttattgcac aaacaaatgc ccatactgtt tatctttacg aatatcataa
     8041 ccaccattac tttgcctaca ttgataaggt atttgaattt gttgtccaac ttcactaaaa
     8101 atcacctctg cgtaatcttt atacccaaat ctctgtttaa taatctccaa gtttctattc
     8161 tcacagtcat caactgcctt tctccatctt ggcgtaggtt tagaacaatt ccaatctgca
     8221 caactgccat caaacattaa ctgcccaaat gataataaat aaccacaact gcttaatcca
     8281 aaaacacaag taattagcat aaaatattta aaaaggattt gtttcatatt tttctccatt
     8341 cggattattg ggattgacta attttggaat agcatgattt atatatttac catcagcacc
     8401 tgttttaggg attccccatt tttttgtgta atcttcccag ttttctgttt caacaggttt
     8461 cccattttcc attttaatat tcccattttc atctctttga tactgctcag gcacttccgc
     8521 aaaataactg ctatgcgaat agcacaaccc cttacatgca ccttgtgtgg tgttattg
//
LOCUS       DBBZXW010000079         8550 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.079, whole genome shotgun sequence.
ACCESSION   DBBZXW010000079 DBBZXW010000000
VERSION     DBBZXW010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8550
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.079"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..158)
                     /locus_tag="ACJJD2_001603"
     CDS             complement(<1..158)
                     /locus_tag="ACJJD2_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HGG7580103.1"
                     /translation="MLIHYIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHK
                     VALVVTEST"
     gene            complement(756..2336)
                     /gene="purH"
                     /locus_tag="ACJJD2_001604"
     CDS             complement(756..2336)
                     /gene="purH"
                     /locus_tag="ACJJD2_001604"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HGG7580104.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLTKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDILSGTPEIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDICR
                     ISRADLKVVSKRQPTEQEWNDLMFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDAGLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTDVRHFRH"
     gene            complement(2497..3720)
                     /locus_tag="ACJJD2_001605"
     CDS             complement(2497..3720)
                     /locus_tag="ACJJD2_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HGG7580105.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGTDGVS
                     ISFREGVAQASGMRRVAVLTLCGAVAGSGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLAV
                     NTSLLWFSAVIGPILGATAVFFQRTAQKFPFIKRDNIKIIPLAVCMFALIGVIAVWFP
                     EILGNGKAGNQLTFGGLTGWQHSLELTAVKWLVVLMALAAGAYGGLITPSMMLGSTIS
                     FAAAAAWNSVFPEMPSGSAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            complement(3784..4617)
                     /gene="serB"
                     /locus_tag="ACJJD2_001606"
     CDS             complement(3784..4617)
                     /gene="serB"
                     /locus_tag="ACJJD2_001606"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HGG7580106.1"
                     /translation="MPHALVLQFPSAEALPSDFPSRLPEPDYADEKRMRFIVEEGFSL
                     SEADAALLGSRQIDHAVLPDMDFDELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKVQAAADACINFGGLERVRGLF
                     G"
     gene            4907..6448
                     /locus_tag="ACJJD2_001607"
     CDS             4907..6448
                     /locus_tag="ACJJD2_001607"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HGG7580107.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTHDGEITFPPPPIQVSAQPQQTPSEKAAPAA
                     KPEPKPVSLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFFVTRRMLN
                     MFKKG"
     gene            6452..6835
                     /locus_tag="ACJJD2_001608"
     CDS             6452..6835
                     /locus_tag="ACJJD2_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HGG7580108.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKTGGFRFSDNHHPRDFLARTQ
                     GAAARAHAAQQNSFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            6901..8286
                     /gene="pntB"
                     /locus_tag="ACJJD2_001609"
     CDS             6901..8286
                     /gene="pntB"
                     /locus_tag="ACJJD2_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HGG7580109.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGINGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
BASE COUNT         1898 a         2404 c         2324 g         1924 t
ORIGIN      
        1 gtactttccg tcacgacgag ggcgaccttg tgttttttaa ggtattcgat agtatgggcg
       61 atacctttgg ggttgttggt ttcggttttg gttttagaca aagacgaaac ggcgatgacg
      121 aagtttcgtt tggcgatgtc gatatagtga attaacaaaa atcaggacaa ggcggcgagc
      181 cgcagacagt acggatagta cggaaccgac tcacttggtg cttcagcacc ttagagaatc
      241 gttctctttg agctaaggcg aaccaacgct gtactggttt agatttaatt cactatacct
      301 gcgtaatggt attgggtact catcataaac ctgccttgca ttcggttgtg ttgtccggca
      361 actgtccggt tgtgtcgatg ggttgccctg ccgctccctg agctacgcaa cggttgtgtg
      421 ccttgggtgg gcgcgggtgg cgctatgata cggtgattcc aatatacaag cggtgggctg
      481 aagcccaccg cttccgtcga ttccgtcaat gttacccatt tccaccgtcc ccgccgaaac
      541 caaaaccgcc gactcccgcc gattctccaa aaatttttga tgcagcgggc tgaagcacac
      601 cctgcatccc accttttacg aatcctccta caccctatac aacaccttga aaatccaccc
      661 tgtcaggaat acccgaaccg tcatccctac cttcacaaaa tagcgcaaaa tgccgtctga
      721 aagcccttca gacggcattg ccttgttcat ctgcgttaat ggcggaagtg gcgcacgtcg
      781 gttacgacca tggcgatgcc gtgttcgtcc gctgcgtcga agacttcctg atcgcgcatc
      841 gaacctgccg gatggatgat ggctttgatg ccctgctcgg caatcacgtc cacgccgtcg
      901 cggaagggga agaaagcatc agaggcggca catgcgccgt ttaagtccaa gcctgcgtcc
      961 tgcgctttgc gggcggcgat gcgggtactg tccacgcggc tcatttggcc tgcgccgatg
     1021 ccgtaggttt gaccgccttt gccgaagacg atggcgttgg atttgacgta ttttgcgacg
     1081 ttccaaacaa acatcaggtc gttccattct tgctcggtcg gttggcgttt ggagacgact
     1141 ttcaaatcgg cgcggctgat gcggcagatg tcgggcgttt gtaccaacag tccgccgccg
     1201 acgcgtttga gttcgaagcg gtttgcgcct gcctcaagcg gcacttccaa tacgcgcacg
     1261 tttttcttgg cggcggcgat ttcgagggct tcggcggtaa acttcggcgc catcaagact
     1321 tccataaact ggttgtcggt aatctgtttg acggtttcgc cgtccacttc gcggttgaag
     1381 gcgatgatgc cgccgaacgc gctggtggtg tcggtgacgt aggcgagttt gtaggcggtc
     1441 aatgtatcgg ctgcaacggc gacgccgcac ggattggcgt gtttgacgat cacgcaggct
     1501 ggcgcgtcaa aggatttgac ggcttcccat gcggcatcgg catcggcgat gttgttgtaa
     1561 gacaattctt tgccttgcag ttgtttgtag gcggaaaggc tgcctgcggc ggggtcaata
     1621 tcgcggtaga acgcggcgcg ctgatgcggg ttttcgccgt agcgcatgtc ttgcacttta
     1681 atccagcttt ggttgaactg gctcgggaat tcaccgattt cgggcgtgcc gctcaagatg
     1741 tcgtctgaaa gcgaggtcag gtagttggaa atcatgccgt cgtattgggc ggtgtggctg
     1801 aacgctttgc gcgacaggtt gaagcgggtt ttgtcgctca acgcgccgtt gttggcttcg
     1861 agttcggcgg cgatggcggg gaagtcggcg gtgtcggtaa cgatggcgac gtgtttccag
     1921 ttttttgcgg cagaacgcac catggtcggg ccgccgatgt cgatgttttc aatcgcgtct
     1981 tccagtgtgc agtttggttt ggcgatggtg gcggcgaagg gataaaggtt gacgcacaca
     2041 aggtcgatat tgccgatgcc gtgttcttcc atcttggcga cgtgttcgcc caaatcgcgc
     2101 cgacccaaaa taccgccgtg gattttcgga tgcagcgttt tcacgcggcc gtcgagcatt
     2161 tcggggaagc cggtatagtc ggcgacttca atcacgggaa cgcccgcatc ggcaagcagt
     2221 ttcgccgtgc cgccggtgga gaggatttcg acaccgagct tggtcagggt ttgggcaaat
     2281 tcgaccgcgc ctgccttgtc ggacaggctg atcagggcgc gtttgatgac ggacattggg
     2341 gcttcctttt ctgacagttg gatggggaaa ggggaacttt ttcggggcgg tattatccgc
     2401 tatttctagt tttttggcag taggtttttg cagatattgc tgacaattta caaagaaatg
     2461 ccgtctgaaa acctttcaga cggcatttgt cggcatttat ttgaagccca tttttcccga
     2521 tgttcccaat gcccccgcca tgccgatgca caaaggcagc agcagggaca gcggcgcgta
     2581 ggtcagttcc aatacgaaca caatggcggt cagcggcatt ttgagcgata cgccgagaaa
     2641 caccgccgct ccgacgactg ccgcgcttcc agacggcatt tcggggaaaa cgctgttcca
     2701 cgcggcggcg gctgcaaaag aaatggtgct gccgagcatc atagacggcg taatcagtcc
     2761 gccgtatgcg cctgccgcca acgccatcaa gacaaccagc catttgacgg cggtcagctc
     2821 aaggctgtgt tgccaaccgg tcaaaccgcc aaaggtcagt tggttgcctg ctttgccgtt
     2881 gcccaaaatt tctggaaacc aaacggcaat cacgccgatg agcgcaaaca tgcagactgc
     2941 caagggaatg attttgatgt tgtcgcgctt gatgaagggg aatttttggg cggtgcgctg
     3001 gaaaaagacg gcggttgcgc ccagtatcgg gccgatgacg gcggaaaacc aaagtaatga
     3061 agtgtttacg gcaaggttgg cgggatgata ttgctgcacg tcgcctaagc cgatgcgcgc
     3121 gacggcggtg gcgatgacgg aagtcagcaa tgcggcggcg acggcttgct gcgtccacac
     3181 gcccagcatg gcttcgagga taaaaagtgt ggaggcgagc ggcacgttat acacggccgc
     3241 caaacccgca cccgaagcgc aagcaatcag cagccgcatt tcgtcttcat ccaaacccaa
     3301 ccgcctgccg ccggcaaaag cgaacgcggc agtcatttca cgcggggcga cttcccgtcc
     3361 gagcggtgaa ccgagtccga ccgttatgat ttgcagcaga acatggaaaa ccgtcgtcag
     3421 aaacggcagc ccctgcaacg gctgtttcaa ggcggctttg atttcgattt gcggcttgcc
     3481 gaaacgtttc agcaaccacc agccgctgcc tgcgaccgcg ccgcacagcg tcagcacggc
     3541 aacgcgccgc ataccggaag cctgtgccac accttcgcgg aacgagatgg acacgccgtc
     3601 cgtgccataa ccgtatgccg tatgttgtat gaagtgcatc agttccgtca gcacaatgcc
     3661 gaccaaaccg ccgataacgc ccgctgctgc cagggcaaac caaagttttc tgcgtcccac
     3721 tgtcgttcct gccgttcaaa tgccgtctga aaacctttca gacggcatcc gtttcctatc
     3781 cgcctatccg aacaggccgc gtacacgctc caaaccgccg aagttgatac aggcatcggc
     3841 ggctgcctgc actttcggtt tggcacggta agccacgcct atgcccgctt ctttgagcat
     3901 cggaatatcg ttcgcaccgt cgcccatcgc caacacctga tgcggctgca atccgaggcg
     3961 gctgcggtat tcgcgcaata aatccgcctt tgcctgcgcg tcgatgattc tgcctttcag
     4021 acgaccggtc aacctgccgt tttcaatttc caaaacattg gcgtgttggt attcgaagcc
     4081 gagtcgttgt tgcagccttt cggtaaaaaa tgtgaacccg ccggacacca gcaggaattt
     4141 cacatcgtgc cttttgcatt cgtccaacaa gaattccgca ccgggcgaga gcttcaaaac
     4201 gttttcataa acgtccgcca aaatctgttc gtccaatccc gccaacagcg caacgcggct
     4261 gcgtaaagac tgttcgaaat cgagttcgcc gcgcatcgaa cgctcggtaa tttccgctac
     4321 tttgtctttt aaacccacgc ctgccgcaat ttcatcgacg cattcaatgg taatcagcgt
     4381 cgaatccata tcgctgacaa ttaaaccgag ttcgtcgaaa tccatatccg gcaacacggc
     4441 gtggtcgatt tgacggctgc caagcaacgc cgcgtccgcc tcgcttaaag aaaacccttc
     4501 ttcaacgata aaacgcatac gcttttcatc ggcgtaatca ggttcgggca ggcgggaggg
     4561 gaagtcggaa ggcagggctt cggcggaggg aaattggagg acgagggcgt gcggcatggc
     4621 ggtaactcaa aaaatgcgga ttatatagtg aaacggcaaa gaatgttacg gcgggcggga
     4681 ctgcaatcgg aaaatgactt caaacgcaaa cggcagtatg tgtcggacaa cacgggaaaa
     4741 tgccgcaact attgccagcc tgatgaaaat tcgttataag gggattatct aaaatatatt
     4801 aacatttgaa gtgaatcggt tttaaaccgg tacggcgttg ctccgccctg ccccgattta
     4861 aatttaaccc acgatacata taaacaaccc gaaaaaggat tcagagatga aaatcggcat
     4921 cccacgcgag tcattatccg gcgaaacccg cgtcgcctgt acgcccgcca ccgtcgccct
     4981 gctgggcaaa ctgggctttg aaaccgttgt cgaaagcggt gcaggtttgg cggcaagttt
     5041 ggacgatgcc gcttaccaaa cagcaggcgc aaccgttgcc gacaaagcgg cggtttgggc
     5101 ctgccctttg atttataagg ttaacgcgcc gtccgaaggc gagctgccgc ttttgaacga
     5161 aggtcaaacc atcgtcagct tcctgtggcc gcgccaaaac gaggctttgg tcgaagcctt
     5221 gcgcgccaag aaagtcaatg cgctggcgat ggacatggtg ccccgtattt cccgcgcgca
     5281 ggctttggac gctttgtctt cgatggcaaa catcagcggc taccgcgccg taattgaagc
     5341 cgccaacgcc ttcggccgtt tcttcaccgg tcaaatcacc gccgccggca aagtgccgcc
     5401 cgcgcaggtt ttggtgattg gtgcaggtgt ggcaggtttg gcggcgatcg gtacggcaaa
     5461 ctcgctcggc gcagtggtac gcgcgttcga tacccgcttg gaagtggcgg aacaaatcga
     5521 atcgatgggc ggcaagttcc tgaaactcga cttcccacaa gaatcgggcg gcagcggaga
     5581 cggctacgcc aaagtgatga gcgacgaatt tatcgcagcc gagatgaagc tctttgccga
     5641 gcaggcgaaa gaagtggaca tcatcatcac caccgccgcc attccgggca aacccgcgcc
     5701 caagctgatt accaaagaaa tggtggaaag catgaaatcc ggctccgtca tcgtcgattt
     5761 ggcggcggcg acgggcggca actgcgaact cacccgcccg ggcgaattgt ccgtaaccgg
     5821 caacggcgtg aaaatcatcg gctacaccga catggcaaac cgccttgccg gacagtcttc
     5881 ccagctttac gccaccaact tggtcaacct gaccaagctg ttaagcccga acaaagacgg
     5941 cgaaatcacg ttggacttcg aagacgtgat tatccgcaac atgaccgtta cccacgacgg
     6001 cgaaatcacc ttcccgcctc cgccgattca agtttccgcc cagccgcagc aaacgccgtc
     6061 tgaaaaagcc gcgcctgccg ccaagcccga gccgaaacct gtttccctgt ggaaaaaact
     6121 cgcgcccgcc gtcatcgccg ccgtattggt gctgtgggtc ggcgcggtcg cacccgcagc
     6181 attcctgaac cactttatcg tgttcgtcct cgcctgcgtc atcgggtact acgtcgtttg
     6241 gaacgtcagc cactcgctgc acacaccgct gatgtcggta accaacgcca tctccggcat
     6301 catcgtcgtc ggcgcgctgc tgcaaatcag ccaaggcaac ggtttcgtta ccctgcttgc
     6361 cttcatcgcc atcctgattg ccagcatcaa tatcttcggc ggcttcttcg taacgcgccg
     6421 catgttgaat atgtttaaga aagggtaagc catgactttc gcctattggt gcatcctgat
     6481 tgcctgctta ttgccgcttt tttgtgcagc gtatgccaaa aaaaccggcg gattccgctt
     6541 cagcgacaat catcatcccc gtgattttct ggcgcgtacc caaggtgccg ctgcccgtgc
     6601 ccatgccgcg cagcaaaaca gttttgaagc atttgcacca tttgcagccg ccgttttgac
     6661 ggcacacgca accggcaatg ccggacaagc aaccgtcaac acgcttgccg gcctgttcat
     6721 cctgttccgc ctcgccttta tctggtgcta catcgcagac aaagcagcat tgcgctcgct
     6781 gatgtgggcg ggcggatttg cctgcaccgt cgggctgttt gtcgcggctg cttgaaacag
     6841 atgccgtctg aacagttcag acggcattaa aaacaaatca tcgaaaatcg gagaatttcc
     6901 atgtcttcag gactcgtaac agcggcgtat atcgttgccg caattttatt catcttctca
     6961 ctggcggggc tgtccaaaca ggaaaccgcc aaacagggct gctattccgg tatcgccggt
     7021 atggcggtcg ccctttttgt aactgttttt tccgacaata cccacggact gggctggatc
     7081 atcatcgcca tgctcatcgg cgcggcaatc ggcatctaca aagccaaaaa ggtggaaatg
     7141 accgaaatgc ccgaactgat tgccctgctg cacagcttcg tcggcctagc ggcggttttg
     7201 gtcggcttca acagctatat cgagccgggc aacgtttcgc acgatatgca caccatccat
     7261 ctggtcgaag tctatttggg cattttcatc ggcgcggtaa cctttaccgg ctcgctggtc
     7321 gcattcggca aactcaacgg caaaatcagc agcagcccgc tgcaactgcc cgccaaacac
     7381 aagctcaacg cactggcgct cgccgtatcg tttgtgttgc tgctcgtatt cgtcggcatt
     7441 aacggtagcg gcttcatcct gctgattatg accctgattg ccctcgcatt cggctggcac
     7501 ttggttgcct ccatcggcgg cgcagatatg cccgtggtcg tgtccatgct caactcctac
     7561 tccggctggg cggccgcagc ggcaggcttc atgctctcca acgacctgct catcgttacc
     7621 ggcgcgctgg tcggctcaag cggcgcgatt ctgtcctaca ttatgtgcaa agccatgaac
     7681 cgctcgtttg tctcggtaat tgccggcggt ttcggcagcg acagcggcac attatcttcc
     7741 ggcagccaag agatagggga ataccgagaa gtcaaagctg ccgatattgc cgaaatgctg
     7801 aaaggcgcaa acaatgtcat cattaccccg ggctacggta tggcagtcgc acaagcgcaa
     7861 taccccgttg ccgaaatcac cgagctttta cgtaaaaacg gcaccgaagt acgcttcggc
     7921 atccaccccg tcgccggccg cctgcccggt catatgaacg tactgctcgc cgaagccaaa
     7981 gtcccctacg acatcgtttt ggaaatggac gaaatcaacg acgacttccc cgaaaccgat
     8041 gtggtcttgg tcatcggtgc gaacgacacc gtcaaccccg ccgcccaaac cgacccgaac
     8101 agcccgattg cgggtatgcc cgtgttggaa gtgtggaagg caaaagaagt cgtcgtcttc
     8161 aaacgctcga tgaataccgg ctacgcaggt gtacaaaacc cactgttctt caacgaaaac
     8221 agcgtgatgt gtttcggaga tgcgaagaaa accgtagatg acattctgtc cgaactgaaa
     8281 aaataatgcc gtctgaacaa ttcggcgcag gttttcaatc tgtttgattt gaaaaaatca
     8341 ctgcaaaccc cgtttatgaa ggtttgcagt gatttttttg cattggggca aacattttca
     8401 gacggcccgt ccgaataagc acctacatct gaaactgaca caaaatcaac gaaacaaaca
     8461 aaatccatct ccgtgttgaa gatggatttt taattagccg aacacttttt ccaagtgtgc
     8521 ctgataatct gccaagtatt tttccacttg
//
LOCUS       DBBZXW010000080         8456 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.080, whole genome shotgun sequence.
ACCESSION   DBBZXW010000080 DBBZXW010000000
VERSION     DBBZXW010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8456
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.080"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            82..1266
                     /gene="coaBC"
                     /locus_tag="ACJJD2_001610"
     CDS             82..1266
                     /gene="coaBC"
                     /locus_tag="ACJJD2_001610"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HGG7580110.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1333..3489)
                     /locus_tag="ACJJD2_001611"
     CDS             complement(1333..3489)
                     /locus_tag="ACJJD2_001611"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG7580111.1"
                     /translation="MPAPQPSAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMGIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3581..3787)
                     /gene="rpoZ"
                     /locus_tag="ACJJD2_001612"
     CDS             complement(3581..3787)
                     /gene="rpoZ"
                     /locus_tag="ACJJD2_001612"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HGG7580112.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3846..4463)
                     /gene="gmk"
                     /locus_tag="ACJJD2_001613"
     CDS             complement(3846..4463)
                     /gene="gmk"
                     /locus_tag="ACJJD2_001613"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HGG7580113.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4591..5190
                     /locus_tag="ACJJD2_001614"
     CDS             4591..5190
                     /locus_tag="ACJJD2_001614"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HGG7580114.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5236..6024)
                     /locus_tag="ACJJD2_001615"
     CDS             complement(5236..6024)
                     /locus_tag="ACJJD2_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HGG7580115.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPP
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAVKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6349..7704
                     /gene="yegQ"
                     /locus_tag="ACJJD2_001616"
     CDS             6349..7704
                     /gene="yegQ"
                     /locus_tag="ACJJD2_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HGG7580116.1"
                     /translation="MKAPELLLPAGGLERMRTAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHHTQDYQNYLTGHSTAKQSQYVGHVTEIDKNGWATIEVKNR
                     FAVGDSLEIIHPNGNQTIKLEQMARKGQPVDVAPGNGIQVKIPDMQGKEKALIARVLN
                     P"
     gene            7838..8314
                     /locus_tag="ACJJD2_001617"
     CDS             7838..8314
                     /locus_tag="ACJJD2_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HGG7580117.1"
                     /translation="MLAVCQSGSAPKNAHTASAGTPAGESCKVIRDDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRGVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
BASE COUNT         2125 a         2310 c         2023 g         1998 t
ORIGIN      
        1 ttgtatccaa acggtaacta atgtatccgt actttgttat agaatggctg ctgtttttct
       61 tcgtaattag aaattgtcaa aatgggtaaa catattcttt taggtgtaac gggcagtatt
      121 gcggcgtata agtcttgcga gttggttcgt ctgctgaaaa aacaggggca ttcggttacg
      181 gtggttatga gccgctcggc aactgaattt gtttctccgc tgacttttca ggctttaagc
      241 ggcaatcctg tcctgaccga cacgcacggc ggcaacggtt caaacggtat ggaacatatc
      301 aacctgaccc ggaatgcgga tgtttttctg attgcgccgg caagtatgaa taccgtggca
      361 aaaatctgta acggcgtggc agataaccta ctgaccagtc tggcagccgc acggaaatgt
      421 ccactcgcca tcgctcccgc gatgaatgtg gaaatgtggc tcaaccctgc caaccaacgg
      481 aatatcgcac aactggtttc agacggcatt actgtctata tgccgggctt aggcgaacag
      541 gcttgcggag aaaatggtat gggaaggatg ccggaacctg ccgaattgct ggatttgctt
      601 ccggacttgt ggacaccgaa aattttaagg ggcaagaaaa tcttgattac cgcaggtgcg
      661 acatttgaag ccattgaccc tgtcaggggc atcacaaata cctccagcgg aaaaatgggg
      721 gtagctttgg cgcgggcgtg ccgtgccgcc ggtgcggaag tcagcctgat tcacggacag
      781 cttcaaaccg cgctgccttt cggcatatcc gatacggttc aagccgtcag cgctgaagat
      841 atgcatcgcg cagtgcatcg tttgattgaa aagcaagatg cttttatttc tgttgccgcc
      901 gtctcagact ataaggttaa aaacaagagt acgcaaaaat tcaaaaaaga taaaaatgcc
      961 aaaccgttat ccatcgaatt ggatgagaac cccgatattt tggcttctat tgcctcattg
     1021 ccaaacccgc cgttctgcat cggttttgcc gctgaaacgg agaatgtaat ggcatatgca
     1081 cgagaaaaac gtattaagaa aaaaataccg gtgatagttg ccaatgatgt ttcaatcgcg
     1141 atgggcaaac cgaccaaccg gattaccatt atcggggacg acggggaact atcttttccc
     1201 gaaacaagta aagatgaagc ggcgatgcag attgttgaaa ggcttgccgt atatttgaac
     1261 aaataagcaa ttgaacggat aaaccataaa gcgggttgcc tgttaatcaa aagacaaccc
     1321 gttttatctg cttcaacttc tgatgacttt gcggatatat ggaatactat gcagattttg
     1381 aataatctga ttcaattgat tcagattctt gactttcaat aagaatttga attcgacaaa
     1441 accttccgtt cccgactggg atttagacgg tgtttcgacc gactcaatgt ccgcaccgga
     1501 atcggaaatc gcttgcgcca ttaatgccag caagccgtgg ctgtcttccg attggacttg
     1561 aagcccgaca cggtagttct gcccgttcat attttcccag tctgcatcca gctgctgttc
     1621 gggatcggac ttcaacaacg tcgggcaggt atccctatgg ataatcatgc cttttccctt
     1681 aaccaacagc aaacggatgg aatcgccggg aacagggtgg cagcactctg caaaatgaat
     1741 atgcccgctt tcctgaccat cgactttaat ggaactgagc ctgacctcgc taccgaaatg
     1801 ctcccctgcc aactcggcaa tgtgcatggc gacataaaca ggcagggtat gccccatacc
     1861 gacgttgtac agcacttcct caaatgaagt ctgtttgtcg ttgagatcgg caagatattt
     1921 ttccttgatg ccgtctgaaa gcaggacatc tttgggcagc aaactggaca gggctttttg
     1981 taagaggctc tctcccaaaa cgaccgcatc gtgccggtta aggtttttaa tatattggcg
     2041 tatggcactg cgcgccctgc ctgacacggc gaaattcaac cacgcgggat tgggtttggc
     2101 gtgttcggat gtgataattt caacagaatc accggttttg agcttcgtac gcaacggcat
     2161 catgatattg ttgatacgtg cggcaacggt tttgtgcccg atatcggtat gcaccgcata
     2221 agcaaaatcg acaggcgttg cccctttggg caaagttagg atttttcctt ttggcgtaag
     2281 gatgtagatt tcgttcggaa acaaatcgac tttgacgtgt tcgagaaact caatggcatt
     2341 ggcactgctt gcctgcaaat ctaagatatt tttcagccac cggtttgtgt gaagcaccgc
     2401 ctgatcgacc gtcttagaat atgatttata gctccaatgt ccggcgattc caccttcggc
     2461 aacagcatcc atttccttgg tacgtatctg aacttcaatc ggcaagccgt aaggaccgac
     2521 caaagtcgta tgcagacttt gatacccgtt gcttttcgga atggcgatat agtctttgaa
     2581 ccgcccgggc ttgggctgat agagggtgtg caatgcgccg agtgcggcat aacaggctgg
     2641 aatgctgttg acaatgacgc ggaaaccgta aatatccata acctcggcaa agcgcagctt
     2701 tttcgccatc attttctgat ggatgccgta caggtttttt tccctgcctt tgattttggc
     2761 ctctatattc gcgcctacca gccgctggcc gaatgcgcgc aagactttgc cgacaacgtc
     2821 ctgccggttc ttccggctct tgtccatcgc tttttttaaa gtctcgtagc ggttgggatg
     2881 caggttttgg aacgataaat cctgaagctc ttgatatgcg ttattcaaac ctatacggtt
     2941 agcaatctgt gcatagattt caagggtttc ccttgcaatc cggcggcgtt tgtccgggcg
     3001 catcgaaccg agcgtccgca tattgtgcag gcggtcggca agtttgacga cgatgacgcg
     3061 cacatctttg gtcatcgcca aaatcagttt gcggaaactc tccgcctgat gttccgcatg
     3121 atcttcaaat ttgagtttct cgagtttgga cagcccgtcc accatctcgg caatcgtatt
     3181 gccgaacacc gccgccattt ccccttttgt cacgcccgta tcttccaata cgtcgtgcat
     3241 cacgcctgca caaagaccct gtatgcccat atgccaaagg gcgagctgcg tcgcaacggc
     3301 aatcggatgc gtgatgtagg gctccccgct tttgcgggtt tgcccgtcgt gggcacgaaa
     3361 cgcataggcg acagcttttt caagctccgc ctgttcctcg ggcttgaggt aggaggcggt
     3421 atggaaaagc agggcacgcg cttcggcggt cagggggtcg taaggggcgg aaggttgggg
     3481 ggcgggcatt tcagacggct ttcggtatgt atgtgttttt catttcaaac cgtcggactg
     3541 cacggcggca aagtgttccg gcgtgcgttt ccggcagaat ttatttattg cgcgtcaaca
     3601 gttctgtacc gatatgtccg gcggcgattt cccttaaggc ggtaacggtc ggtttgttat
     3661 tgcggacatc gtccacaagc ggcgtattgc cattttcaag ctggcgggcc cgacgggccg
     3721 ctaccaatgt caggtcaaaa tggttggaaa tttttccggt acagtcttcg gtggtaatac
     3781 gtgccatatt atttgctttc tttcaaaaat atttaaaata ggaaactggg tattttcgcg
     3841 gttttttagg aattttccaa caaatctgca ataaatccca gttgccgcga ccttttcaga
     3901 cggcaggcat tcacaatatg gcgcaaatcc tcctccgccc gcgccaagtc atcattgacc
     3961 acgacaaaat cgaacaatac ggactgttcg atttcatgcc ttgccttcga cagcctcctt
     4021 tggataactt cccgactgtc cgtcccgcgt ccgttcagac gtgcagcaag cacatcgaaa
     4081 gacggcggca ggataaagat gccgacggct tccggcagcg cgttgcgaac ctgcgccgcg
     4141 ccctgaacgt cgatttccaa aattacgtca tagcctgccg ccgccaaagc attcacgccc
     4201 tccgcgcttg tgccgtaata gttgccgaac acgtctgcgt attccaaaaa agcttcctgc
     4261 gcgataagcg actcaaactc ttctttagaa acaaaatgat aatgtacgcc gtttacttcg
     4321 ccttcacgcg gcggacgcgt cgtgtgcgat acggaaacgc gcaaaccgtt atggtttgcc
     4381 aacagccgcg acaccagcgt ggttttgccc gtgccggaag cggccgaaat gataaagatg
     4441 ttgccttttc gataagcgga catatttttt acctgtatat tttccagccg attgtatcac
     4501 aacggacact cggtttccta tttgccgatg cccatatttt gccgctattg ttttgattga
     4561 tttggcaagc ggcaggctga cggctacaat atggcgttaa aaacatcaaa cttggaacac
     4621 gcaatgctgg ttcatcccga agctatgagt gtcggcgcgc ttgccgacaa aatccgcaaa
     4681 atcgaaaact ggccgcaaaa aggcatctta ttccacgaca tcacgcccgt cctgcaaagc
     4741 gcggaatact tccgactttt ggttgattta ttggtttacc gctatatgga tcagaaaatc
     4801 gacatcgttg ccggtttgga cgcgcgcggc ttcattatcg gcgcggcact cgcctaccag
     4861 ctcaacgtcg gtttcgtccc catccgcaaa aaaggcaagc tgccttttga aaccgtatcg
     4921 caaagctacg cgctcgaata cggggaagct gcggtggaaa tccacaccga tgccgtcaaa
     4981 cccggttcgc gcgtgctgct ggtcgatgat ttggttgcca cgggcggcac aatgcttgcc
     5041 gggctggaac tgatccgcaa actcggcgga gaaattgtcg aagccgccgc cattttggaa
     5101 tttaccgacc ttcaaggcgg caagaatatc cgtgcaagcg gcgcgccctt atttaccctg
     5161 cttcaaaacg aaggctgtat gaagggctga aaaccgaccc tgccgtctga aaccggcagg
     5221 gttgttatga tgcgttcaaa tcacgcccaa atcttgcaag cccctcaaca cgccgtcttc
     5281 atcaacgccg gggcaaacat atttcgccgc ctctttcact gcctgttccc cgttacccat
     5341 tgccacaccg aacccgactt cagacagcat ttccacatcg ttcaaaccgt cgccgaacgc
     5401 catcacgtcc gccatttcca aacccaatgc ttcaaccacg cttctgatgc cgtctgtttt
     5461 cgacattccc gcaggcagca gatcgaccgc ttcctcgtgc cagcgcaccg ttttcaagcc
     5521 ttcccgttcc acaatatccg accagggcgg catttcgttt tcctccgcaa acaccagcat
     5581 ctgatacacc ggtttgcttg aaaaataatc cttatcggca aaaaaatcgc tggcgatatg
     5641 ctgcaaggcg cggcacacgc attccgacag cgcggacacg gcgatcccct ctccgccgac
     5701 aaacgcataa tccataccca agccatccaa atgcgcgcaa accctgccca tcaaaccggc
     5761 atccatcggt acttcgcgca cagtttttcc gtgcagcagc gcaaactgtc cgtttatcgt
     5821 taccacggca tccatgcccg tttccgccat catgtccctg accttttcgg gaatcgtcgc
     5881 caaagaccgc cccgttgcca acgccgtcaa tatgcctttg ccgcgcaaag ccgccaccgc
     5941 cgttttcacg gaaggacgca aggtatccgt atatttgcgg tacagcgtat cgtcaatatc
     6001 gaaaaacacg attttaggat tcatcacatt ctctctcgca ttcaaactgc cgcattgtat
     6061 cccaatcagg caaatacttg ataaatcctt ataaatttcc cggcaaaatt gaccgcgaac
     6121 acgaaaaggc ggataatccg cccatcctca aacccttttc agacggcatt tgcagcaatg
     6181 ccgtctgaaa catttttaca aagcacacaa atcatgtttc aacacacagg acgacacata
     6241 aagcgtcgcc ctatgtgttg ccctgattcg gaaggggtta cgcccctccc aaataaagtc
     6301 tgattctacc gccctaaagg gcggggtttc aaccgaaaag gaaacacgat gaaagcaccc
     6361 gaactcttat tgcccgccgg cggattggaa agaatgcgca ccgcctacga ctacggcgca
     6421 gatgccgttt acgccggcag cccgcgttat tccctgcgcg cccgcaacaa cgaatttgcc
     6481 aaacttgatg ttttagaaca aggcattaaa gaagcgcacg agcgcaacaa aaaattcttt
     6541 ttgaccgtca acaccctgcc gcacaattcc aaactcaaaa cctttgtttc cgatatggag
     6601 ccgctgattg cgatgaagcc cgacgcgctg attatggcgg atccgggctt gattatgacc
     6661 gtgcgcgaaa aatggccgga aatgccgatc cacctgtccg tacaggcgaa caccaccaac
     6721 tactggggcg tgaaattctg gcagaacatc ggcgtcgaac gcattattct gtcacgcgaa
     6781 ttgagtatgg aagaaatcgc cgaaatccgc caacaatgcc ccgacatcga actcgaagtc
     6841 ttcatccacg gcgcattgtg catcgcctac tccggccgtt gcctattgtc gggctatttc
     6901 aaccaccgcg accccaacca aggcacttgc accaactctt gccgttggga ttacaaagtc
     6961 cacaacgcta cggaaagcga tgcgggcgat gcccagcttc tgcaaggttt taactttgaa
     7021 aaagcccaag aagaagccaa ccaaaacttc gaaggcatca acggtcagaa acgccatccc
     7081 tacgccgaca aggttttcct gattgaagaa tccaaccgtc cgggcgagat gatgccgatt
     7141 atggaagacg aacacggcac ctacatcatg aactccaaag accttcgtgg cattgaagtg
     7201 gttgagaaac tcgccaaaat cggcgtggac agcctcaaag tcgaaggccg caccaagtcg
     7261 ctctattatg tcgcacgcgt cgcccaatcc taccgcaaag cgattgacga tgccgtcgca
     7321 ggccgtccgt ttgattacag cctgttgagc gaactcgaag gccttgccaa ccgcggctac
     7381 accagcggct tcctcgaacg ccaccacact caggattatc aaaactacct gaccggccat
     7441 tccaccgcca aacaaagcca atacgtcgga cacgttaccg aaatcgacaa aaacggctgg
     7501 gcgaccatcg aagttaaaaa ccgcttcgcc gtcggcgatt cactcgaaat catccacccg
     7561 aacggcaacc aaaccatcaa attggaacaa atggcccgaa aaggccagcc tgtcgatgtc
     7621 gcacccggca acggcattca ggtcaaaatc cccgatatgc agggcaaaga aaaagccctc
     7681 atcgcacgcg tgttgaaccc ctgagccaca atgccgtctg aaccccgttt tcagacggca
     7741 ttttgttgaa tcttacggta caatggcaat gatttcccac cgcaagcaag gatatccgac
     7801 atgaaaaaaa atcctcatac tctccgccgc cgccctgatg ctggcagtct gccaatccgg
     7861 cagcgcacct aaaaacgcgc acacggcatc cgccggcaca ccggccggag aatcatgcaa
     7921 agtcatccgg gacgacaccg caggaagcgg caaaaacatc atttaccgtt gctgcaacgg
     7981 tcaggcggca ataaatgcag ccattgcaga cggcgtattg gaatcaggga ttcccgtcag
     8041 cttcggcggc gggggcgtac cggttgcaaa cggcaggaat ctggttacac ggcaagcagc
     8101 aaacggcgtt ggcaaatccg actccgaggc ctgcgaacac gccctaatca atgccgcccg
     8161 caaattccag cagaccgccg gcaaactcgg cgggcgcggc gttaccggct tccacagcta
     8221 cttcgacaag cagccgctgc aaggcggaca atacgactgt caggcaggct cgttccacgt
     8281 ccgtgtggtc atgcgcgcca atgtcgtccg ttaacatatc ggcaatcaaa aaattaggct
     8341 gtgttttagt aatctgttga tttcaattat ttgcaaagga aaagacaatt attttttcgg
     8401 ttaggaagag acctatccta ttgaatacat ttaagttaaa tacgtctatc aacact
//
LOCUS       DBBZXW010000081         8408 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.081, whole genome shotgun sequence.
ACCESSION   DBBZXW010000081 DBBZXW010000000
VERSION     DBBZXW010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8408
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.081"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..529)
                     /locus_tag="ACJJD2_001618"
     CDS             complement(<1..529)
                     /locus_tag="ACJJD2_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HGG7580118.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNG"
     gene            879..1325
                     /gene="iscR"
                     /locus_tag="ACJJD2_001619"
     CDS             879..1325
                     /gene="iscR"
                     /locus_tag="ACJJD2_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HGG7580119.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNSDGSRVVQFTHIH"
     gene            1354..2568
                     /locus_tag="ACJJD2_001620"
     CDS             1354..2568
                     /locus_tag="ACJJD2_001620"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HGG7580120.1"
                     /translation="MTVKTPVYLDYAATTTVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WEAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILVSVMWANNEIGVV
                     QDIPAIGEICRERKIVFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELAQDTAHYLKLRDI
                     FLKGIEGIEEVYINGDLGHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            2714..3559
                     /locus_tag="ACJJD2_001621"
     CDS             2714..3559
                     /locus_tag="ACJJD2_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HGG7580121.1"
                     /translation="MKIANALIHNTVRIECLSADGQSISTGTAFLFLFDFDKTGVIPV
                     LVTNKHVVFVESAKKIAITLTKDENGSPNHKENITFTIEDFIQNCLPHPDENIDLCIA
                     PVGHFFNQLINHNFSPFIKGIRESDIMQTEEMDQLSAFEEVFMIGYPNGLWDSKNNLP
                     IFRTGITATHPAIDFEGKKEFMIDVACFPGSSGSPVFKYIPAGLRKIENDGFAITADE
                     TFKLMGILYAGPQQTISGEIYITTVNKPISVSSIPINLGFVIKAEKLLDFKPILKNFL
                     EKNRE"
     gene            3706..3834
                     /locus_tag="ACJJD2_001622"
     CDS             3706..3834
                     /locus_tag="ACJJD2_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580122.1"
                     /translation="MNEQELDLDNLDNLLDDFDGVTVEGGVDSENDEGCEGGACKI"
     gene            3902..4288
                     /gene="iscU"
                     /locus_tag="ACJJD2_001623"
     CDS             3902..4288
                     /gene="iscU"
                     /locus_tag="ACJJD2_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HGG7580123.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            4375..4695
                     /gene="iscA"
                     /locus_tag="ACJJD2_001624"
     CDS             4375..4695
                     /gene="iscA"
                     /locus_tag="ACJJD2_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HGG7580124.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(4655..4876)
                     /locus_tag="ACJJD2_001625"
     CDS             complement(4655..4876)
                     /locus_tag="ACJJD2_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HGG7580125.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            4958..5458
                     /gene="hscB"
                     /locus_tag="ACJJD2_001626"
     CDS             4958..5458
                     /gene="hscB"
                     /locus_tag="ACJJD2_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HGG7580126.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            5556..8306
                     /gene="gyrA"
                     /locus_tag="ACJJD2_001627"
     CDS             5556..8306
                     /gene="gyrA"
                     /locus_tag="ACJJD2_001627"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HGG7580127.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
BASE COUNT         2425 a         2335 c         1880 g         1768 t
ORIGIN      
        1 ggccgttttt gatgtctttg tggcgttgcc ccaaaacctg caaatcggcg gtcaaaacca
       61 atgccgaaca tttggcatcc ttcgcgcgct taatcaggtt ttccataaat tcgcggtcgc
      121 gcatcacata aagctgaaac caaaacggcg cgctggtgtt ctcggcaacg tcttcaatcg
      181 agcagatgga catggtggac aacgtaaacg gaataccgaa cttctccgcc gcccgcgccg
      241 ccaaaatttc gccgtctgcg tgtgccatgc cggtaaaacc cgtcggcgca atcgccaccg
      301 gcattttcac atcctgcccg atcattttag tctcaaggct gcgtccctcc atattgacca
      361 atactttttg acggaagcgg atgtctttga aatccgaagt attttcccga taagtcgttt
      421 ccgtccacga acccgaatcg atgtaatcgt aaaacatacg cggcattttg cgcttggcaa
      481 cgcggcgcaa gtcttcgatg caggtcattt tgctcaaatc acgtttcatc ttgtttttcc
      541 ctgtttgaca gcctgatgga atatgccgtc cgaaaccgct tgagccttca aacggcattt
      601 caggcaatac ccaaataaat cactaagatt tagataatct atatcagtat caaaaataaa
      661 tcaaatcgtt ttgaaaccgc ttgccggcaa aataccccga ccgccgctcc tcaaaaaaca
      721 taaccaactg atttaaaaaa ccaaacaaat aaagtaaaat cagactatac cgccatttaa
      781 acaaacaatc ggcaacagct cccccttact tgactgaaac actcagatat tggacaattc
      841 tccccactat aaaaaagccg acacgggcaa ccaccaccat gagactgacc accaaagggc
      901 gttttgccgt taccgctatg ctggatttgg cgatgaacgc gcaaaccggc gccgtcaaac
      961 tcagtgccat cagcgaacgc caaaacatat ccctctccta tctcgagcaa ttgttcggca
     1021 aactccgccg cgccggactg gttgaaagcc tgcgcgggcc cggcggcggc tacatcctcg
     1081 ccgcaccggc ggcacgcatc aacatcgccc aaatcatcgc cgccgccgaa gaccggctgg
     1141 acgcgaccca atgcggcagc aaagccaact gccaccacgg tgcgccctgc ctgacgcacg
     1201 acctttggga gaatttaaac aaaaccatca acgactacct cggcagcgtt accctgcaaa
     1261 gcatcatcga acagaaaaac aacagcgacg gcagccgcgt cgtccaattt acacacatcc
     1321 attaaataac acccgaaaaa gaaagagcaa accatgaccg tcaaaacccc cgtttacctc
     1381 gactacgccg ccaccaccac cgttgacaaa cgcgttgccg aaaaaatgat tccctatctg
     1441 accgaaacct tcggcaaccc cgcctccaac agccacgcat tcggctggga agcagaagag
     1501 gccgtcgaaa aagcccgcgc cgacatcgct gccctgatta atgccgaccc caaagaaatc
     1561 gtcttcacca gcggcgcgac cgagtccgac aacctcgcca tcaaaggcgc ggcaaacttc
     1621 tacaaaacca aaggcaaaca cctcattacc gtcaaaaccg aacataaagc cgttttagat
     1681 acaatgcgcg aactcgaacg ccaaggtttt gaagtaacct acctcggcgt tcaagaaaac
     1741 ggtttgattg atttggaaga actcaaagcc gccatccgcg acgacaccat cctcgtttcc
     1801 gtaatgtggg caaacaacga aatcggcgtg gtgcaagaca ttcccgccat cggcgaaatc
     1861 tgccgcgaac gcaaaatcgt cttccacgtc gatgccgccc aagcctgcgg caaagtgcct
     1921 gtcgatgtcg aagccgccaa aatcgacctg ctctcgatgt ccgcgcacaa agtgtacggc
     1981 cccaaaggca tcggcgcgct gtacgtccgc cgcaaacccc gcgtccgcct cgaagcccaa
     2041 atgcacggcg gcggccacga acgcggcttc cgcagcggca cattgccgac ccaccaaatc
     2101 gtcggtatgg gcgaagcctt ccgcattgcc aaagaagaat tggcacaaga cactgcgcac
     2161 tacctgaaac tgcgcgatat cttcctcaaa ggcatcgaag gcatcgaaga agtctacatc
     2221 aacggcgacc tcggacaccg cgccccgaac aacctgaacg tcagcttcaa cttcgtcgaa
     2281 ggcgaaagcc tgattatggc ggtgaaagaa ctcgccgtat ccagcggctc cgcctgcacc
     2341 tccgcctcgc tcgaacccag ctacgtcctg cgcgcgctcg gccgcaacga cgaactggcg
     2401 cactcatccc tgcgtatcac cttcggtcgc atgaccaccg aagaagaagt gcaattcgcc
     2461 gccgaactga ttaaatccaa aatcggcaaa ctgcgcgaac tgtcgccgct gtgggaaatg
     2521 ttcaaagacg ggattgattt gaactcgatt gaatgggcgg cgcattaatt tatgaattag
     2581 tacgatgata tgagtatagt agataagatt ttcaaatatt ctcgccacct cgattattga
     2641 gatatagtga acttcttatc tacggataaa atttttatag atagtttaat atttaaatag
     2701 aacttaaaaa attatgaaaa tagccaatgc attaattcac aatacagtcc gtattgaatg
     2761 cctttcagca gacggccaat ctatatcaac gggaacggca ttcttattcc ttttcgattt
     2821 cgacaaaaca ggggtaattc cagttcttgt aacaaataaa catgttgttt ttgtagagtc
     2881 cgcaaaaaaa atagctatta ctttgacaaa agatgaaaat ggctctccaa atcataaaga
     2941 aaatataact tttacaattg aagattttat acaaaattgt ttacctcatc ctgatgaaaa
     3001 tattgatcta tgcattgctc ctgttggaca tttttttaat cagctgatta atcataattt
     3061 ctcgcctttt ataaaaggaa taagagaatc tgatattatg caaactgaag aaatggatca
     3121 attatcagct ttcgaagaag tttttatgat aggctatcct aatggcttat gggactcaaa
     3181 aaacaactta ccaatattta gaacaggaat tactgctacc catccagcta ttgattttga
     3241 agggaaaaaa gaatttatga ttgatgttgc ctgtttccct ggttcaagcg gttctccggt
     3301 gttcaaatat atacctgctg ggttaagaaa aatagaaaac gatgggtttg caattacagc
     3361 agatgaaaca tttaaattaa tgggaatcct atatgctgga cctcagcaaa caatatcagg
     3421 ggaaatttat ataacaactg ttaataaacc aatttctgta tcttctattc ctattaattt
     3481 aggttttgtc ataaaggcag aaaaactttt agactttaaa ccaattttaa agaatttttt
     3541 ggaaaaaaat agagaatgaa attatattaa aagattaata aatattagag actggcaatc
     3601 caccttacct aatctacatt aaaaataaaa aagaccgttt gaaacatcaa aaagattttt
     3661 tcaaacgacc taaaagccac cacatgaaat caaggataca aaaccatgaa cgaacaagaa
     3721 cttgacctcg acaatctcga caacctgctt gacgattttg acggcgttac cgtcgaaggc
     3781 ggcgtcgatt cggaaaacga cgaaggctgc gaaggcggcg cgtgcaaaat ctgactcagg
     3841 ccgtctgaaa accggcaaac aaaccacttt aaactatcaa aaacattaag gaaaccacat
     3901 catggcatac agcgataaag taatcgacca ctacgaaaat ccccgcaacg tcggtacttt
     3961 cgacaaaaac gacgaatctg tcggcaccgg catggtcggc gcgcccgcct gcggcgacgt
     4021 catgcgcctg caaatcaaag tgaacgacga gggcatcatc gaagatgcga aatttaaaac
     4081 ttacggctgc ggctcggcca tcgcttcgtc cagcctgatt accgagtggg ttaaaggcaa
     4141 aagcctggat gacgcgctgg caatcaaaaa cagcgaaatc gccgaggagt tggaattgcc
     4201 gccggtaaaa atccactgct ccatcttggc tgaagatgcg gtaaaagcgg ccgttgccga
     4261 ctaccgcaaa cgtcaggaaa acagataaag cccttcagac ggcatcatcc cgcaatgccg
     4321 tccgaaccac ccgccgcttc aggtccgtcc ggggcggtac aacaaggaag aaatatgatt
     4381 acccttaccg agaatgccgc aaaacacatc aatgactatc tcgccaaacg cggcaaaggc
     4441 ttgggcgtac gcttgggtgt gaaaaccagc ggctgctcgg ggatggcgta caaccttgaa
     4501 tttgtcgacg aagccgatgg cgacgacctg attttcgaag gacacggcgc gcgcatttat
     4561 atcgatccga aaagcctggt ttatctggat ggcacgcaag tcgattacac caaagaaggt
     4621 ttgcaggaag gtttcaaatt tgaaaacccc aatgtcaaag actcctgcgg ctgcggcgaa
     4681 agcttccacg tttaaggcat aaaaacggcg ggaccgtatc aaaaccgtcc cgccattttt
     4741 tcgcttcctg cctgttgtag ctgcctttgc ctttcctttt ccgttccacc ttgtgccgga
     4801 acaaatcgga tttcactaag gcttttaaag cattgtcgcg tattttgcct ttattgtgct
     4861 gcactttgcc gcccatattc agtcctttcg tttaagaagc ggcagattat aaggcaaaaa
     4921 cagttttctg ccaaaatctt acatttatca tcctactatg tcccaatatt tcaccctctt
     4981 ccggattgaa cccgctttcg atatcgacac cgaaaacttg gaacaaacct accgcgcctt
     5041 ggccgcccgt ttccatcccg ataaattcgc ttcagcttcc gcctttgagc aaaagcaggc
     5101 agtgatgatg tcttccacca tcaacgatgc ctaccgcacc ttgaaaaacc ccatcgaccg
     5161 cgccgcctac ctgctgaaaa catcgggcat cgatgccgac gcgccggagc ataccgcttt
     5221 cgcccccgaa ttccttatgc agcaaatgga atggcgcgaa acgctgatgg aggcacgggc
     5281 aggcaacgac cttgaatcct tgaaaaatct cgacaacgaa atccgcgacg agcaagaaaa
     5341 actgttctgc ggtctgaaac agtcgtttgc ccgacaagat tacgacacag ccgcacaaca
     5401 agtccgccaa ggcaggtttc tcgacaaact ccgcaacgaa atttcctcgg cattataatc
     5461 cgcaccgtgt ttcagacggc gtaaccgccg caccgttccg cgtcaaaata tgctaaaata
     5521 agcaacaatt ttttgccata cgaaacattg aaaccatgac cgacgcaacc atccgccacg
     5581 accacaaatt cgccctcgaa accctgccgg taagccttga agacgaaatg cgcaaaagct
     5641 atctcgacta cgccatgagc gtcattgtcg ggcgcgcgct gccggacgtt cgcgacggtc
     5701 tcaagccggt acaccgccgc gtactgtacg cgatgcacga attgaaaaac aactggaatg
     5761 ccgcctacaa aaaatcggcg cgcattgtcg gcgacgtcat cggtaaatac cacccccacg
     5821 gcgataccgc cgtatacgac accatcgtcc gtatggcgca aaatttcgct atgcgttatg
     5881 tgctgataga cggacagggc aacttcggat cggtggacgg gcttgccgcc gcagccatgc
     5941 gctacaccga aatccgcatg gcgaaaattt cccacgaaat gctggcagac attgaggaag
     6001 aaaccgtcaa tttcggcccg aactacgacg gtagcgaaca cgagccgctt gtactgccga
     6061 cccgtttccc cacactgctc gtcaacggct cgtccggcat cgccgtcggc atggcgacca
     6121 atatcccgcc gcacaacctt tccgataccg tcaatgcctg cctgcgcctg ctcgatgcac
     6181 ccgacaccga aatcgacgaa ctgatcgaca ttatccaagc ccccgacttc ccgaccgggg
     6241 caaccatcta cggcttgagc ggcgtgcgcg aaggctataa aacaggccgc ggccgcgtcg
     6301 ttatgcgcgg taagacccat atcgaaccca taggcagaaa cggcgaacgc gaagccatcg
     6361 ttatcgacga aatcccctat caggtcaaca aagccaagct ggtcgagaaa atcggcgatt
     6421 tggttcggga aaaaacactg gaaggcattt ccgagctccg cgacgaatcc gacaaatccg
     6481 gtatgcgcgt cgttatcgag ctgaaacgca acgaaaatgc cgaagtcgtc ttaaaccaac
     6541 tctacaaact gactccgctg caagacagtt tcggcatcaa tatggtggtt ttggtcgacg
     6601 gacaaccgcg cctgttgaac ctgaaacaga ttctctccga attcctgcgc caccgccgcg
     6661 aagtcgttac ccgacgtacg cttttccggc tgaagaaggc acgccatgaa gggcatatcg
     6721 ccgaaggcaa agcggtcgca ctgtccaata tcgatgaaat catccggctt atcaaagaat
     6781 cgcccaacgc ggtcgaggcc aaagacaaac tgcttgcgca cccttggcgc agtagcctcg
     6841 ttgaagaaat gctgacgcgt tccggtctgg atttggaaat gatgcgtccg gaaggattgg
     6901 ctgcaaacat cggcttgaaa gagcaaggtt attacctgag cgagattcag gcagatgcta
     6961 ttttacgcat gagcctgcga aacctgaccg gcctcgatca agaagaaatt gtcgaaagct
     7021 acaaaaacct gatgggtaaa atcatcgact ttgtggatat cctctccaaa cccgaacgca
     7081 ttacccaaat catccgcgac gaactggaag aaatcaaaac caactatggc gacgaacgcc
     7141 gcagcgaaat caacccgttc ggtggcgaca ttgccgatga agacctgatt ccgcaacgcg
     7201 aaatggtcgt taccctgaca catggcggct atatcaaaac ccagccgacc accgactatc
     7261 aggcgcagcg tcgcggcggg cgcggcaaac aggcggctgc caccaaagac gaagacttta
     7321 tcgaaaccct gtttgttgcc aacacgcatg attatttgat gtgctttacc aatttgggca
     7381 agtgtcattg gattaaggtt tacaaactgc ccgaaggcgg acgcaacagc cgcggccgtc
     7441 cgattaacaa cgtcatccag ttggaagaag gcgaaaaagt cagcgcgatt ctggcagtac
     7501 gcgagttccc cgaagaccaa tacgtcttct tcgccaccgc gcagggaatg gtgaaaaaag
     7561 tccaactttc cgcctttaaa aacgtccgcg cccaaggcat taaagccatc gcgctcaaag
     7621 aaggcgacta cctcgtcggc gctgcgcaaa caggcggtgc ggacgacatc atgctgttct
     7681 ccaacttagg taaagccatc cgcttcaacg aatactggga aaaatccggc aacgacgaag
     7741 cggaagatgc cgacatcgaa accgaaattt cagacggcat cgaagatgaa accgccgaca
     7801 gcgaaaacgc actgccgagc ggcaaacacg gtgttcgccc gtccggtcgc ggcagcggcg
     7861 gtttgcgcgg tatgcgcctg cctgccgacg gcaaaatcgt cagcctgatt accttcgccc
     7921 ctgaaaccga agaaagcggt ttgcaagttt taaccgccac cgccaacgga tacggaaaac
     7981 gcaccccgat tgccgattac agccgcaaaa acaaaggcgg gcaaggcaat attgccatta
     8041 acaccggcga gcgaaacggc gatttggtcg ccgcaacctt ggtcggcgaa accgacgatt
     8101 tgatgctgat taccagcggc ggcgtactta tccgcaccaa agtcgaacaa atccgcgaaa
     8161 ccggccgcgc cgcagcaggc gtgaaactga ttaacttgga cgaaggcgaa accttggtat
     8221 cgctggaacg tgttgccgaa gacgaatccg aactctccga cgcttctgta atttccaatg
     8281 taaccgaacc ggaagtcgag aactgaaaat catctcccga tgccgtctga agattcagac
     8341 ggcatttatt ttatccctca tccgtcatcc ggcttctcac aatatagcgg attatagtca
     8401 attaaaaa
//
LOCUS       DBBZXW010000082         8403 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.082, whole genome shotgun sequence.
ACCESSION   DBBZXW010000082 DBBZXW010000000
VERSION     DBBZXW010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.082"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(255..815)
                     /gene="sodC"
                     /locus_tag="ACJJD2_001628"
     CDS             complement(255..815)
                     /gene="sodC"
                     /locus_tag="ACJJD2_001628"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC"
                     /protein_id="HGG7580128.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1232..2272)
                     /gene="mutY"
                     /locus_tag="ACJJD2_001629"
     CDS             complement(1232..2272)
                     /gene="mutY"
                     /locus_tag="ACJJD2_001629"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HGG7580129.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIIRNRNGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2435..3476
                     /locus_tag="ACJJD2_001630"
                     /pseudo
     CDS             2435..3476
                     /locus_tag="ACJJD2_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            complement(3499..3717)
                     /locus_tag="ACJJD2_001631"
     CDS             complement(3499..3717)
                     /locus_tag="ACJJD2_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580130.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(3732..4370)
                     /locus_tag="ACJJD2_001632"
     CDS             complement(3732..4370)
                     /locus_tag="ACJJD2_001632"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HGG7580131.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     RNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4551..6386)
                     /gene="edd"
                     /locus_tag="ACJJD2_001633"
     CDS             complement(4551..6386)
                     /gene="edd"
                     /locus_tag="ACJJD2_001633"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HGG7580132.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLINETE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            6902..8347
                     /gene="zwf"
                     /locus_tag="ACJJD2_001634"
     CDS             6902..8347
                     /gene="zwf"
                     /locus_tag="ACJJD2_001634"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HGG7580133.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERFAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT         1969 a         2000 c         2312 g         2122 t
ORIGIN      
        1 aatagacgaa aacctgtgtt tgggtttcgg ctgtcgggag ggaagggaat tttgcaaagg
       61 tctcaaatag tacggaatcg attcacttgg tgcttcagca ccttagagaa tcgttctctt
      121 tgagctaagg cgaggcaacg ctgtactggt ttaaatttaa ttcactatac tgctgaagtc
      181 gtgaattaaa tgctaaatat ctagcaaaaa agtgcggtca aaatttaccg cacttttcgt
      241 ttcgaacaat cgaattattt aatcacgcca catgccatac gtgggccgcc accgccaagt
      301 ggagctggat gatcggagtg attatcacca cccgtgtgga tcataataga gtgaccgcga
      361 acatcatcta aatgtttaag acgtggtgct aaaacaggat ttgttgctgt gccatcatgc
      421 aatacagtta atgcaggtaa atcacctaag tgtgcatcat cttgccatgg gtaaccatgt
      481 tgttttgcac ctttaggatc ccagtgaccg cctgcgccta aaccagctgt caatttacct
      541 tctttttctt ttggctcaca gcttgggttt tcatggatgt ggaaaccatg taagccttcg
      601 cttaatcctt gtaaatcagg ggtaaacaca agaccatagt tagattcagt aatagtcact
      661 gtacccacat ctttgttacc gtttactgga tcaagttgtt gcactttcac ttcaatagaa
      721 gcacctttag gtatcgtatt atgctcgtgt gcttgcgcaa caccaactga acatactgca
      781 ctaaccgcta gtgctaataa ggttttcata ttcattgcaa tctcctttat tgcagtaaaa
      841 actcgcgact attttagtca attttgtttt aaaagccgat aaatttttac gaaaatttta
      901 cattaattgt tatttgcaga aaattagaac ccgttatcac gtcttggata aatgccaaaa
      961 ccattgtgat tcagagaatt aaaaagaaaa atttcggaat cctcatcctt ttctgaaacc
     1021 tgattgcggt atccatggct ttgtctttgt catttaagtt tgtgttcatg tttttgacct
     1081 tctttgcttt ttaaatcctt tttaaattgc cgacttctac cgttccaaat gtcccatttg
     1141 aacattatcc cgccgcctaa aatacgaccc aaattcatcg gttgttcttg ctgcgatacc
     1201 tgcaaacaac agttcaatgg gtttattttg tttattctaa cctattaccg tttaaataaa
     1261 tttccaaagg cttgggcaaa ccgtaatctt tcaaatgcgc cggctttatc caaatgccgt
     1321 ctgaagggct ttcagacggc atttgtcctt caaacggcgt aatcatcagc aaccggtgcg
     1381 tcagccggtg ggtcagggcg gtttgttcgt ccatatctgc catggtcagg gagaatttgg
     1441 cggcaaagtc ggaaagcccg ttcaaacttt caaaacacgg cacgcaatac agcccgcccc
     1501 aaatgccttt ggcggggcgt ttttccagca aaatcgcgcc gttccggttg cggataatca
     1561 gccagtaaag cggcagggtc ggtacttcgg cggcggtttt tttgcgcggc agctcggcgg
     1621 tgcggttttg ctttttcgct tcgcagatgt ccgccatcgg gcattggtgg cacaagggtt
     1681 tcgtccgttt gcacacggtc gcgcccaaat ccatcaaacc ttgtgtatag gcaggcatat
     1741 cggcgttttc agacggcagc aggctttcgg caagtgtcca gagcgagttt tcaaattttt
     1801 tgtcctgcgg attgccgtcg cgggcgaaca cgcggcagag tacgcgtttg acgttgccgt
     1861 ccaaaatggt ttcgcggcgg ttgaaggaga aggcgcaaat ggcggcggcg gtgcttctgc
     1921 ctacgccgca gagggtttcc aagtctttgc gctccgacgg aaacgtgccg ccgaattgcc
     1981 tgacgacttg ttgcgcggct ttgtgcaggt tgcgcgcgcg gctgtaatag cccaagcccg
     2041 cccacaacga caacacttcg tcttgcggcg cggcggcaag cgtctgaacg gtcgggaatt
     2101 tttctaagaa gcgcggatag tagtccaaca cggtggcgac ttgcgtttgc tggagcatga
     2161 tttcggaaag ccagacgcaa taagggtttt tgacctgcca agggaggtgg tggcgaccgt
     2221 gttgtttttg ccagcggatg agccgttcgg agaaggggat gggtgtgttc attaatatca
     2281 atcggtggtt ttatttatat ttaaaacggt atgttattgt ataacattgt gaaaataatt
     2341 cttattgact tattttttgt aggggcatat aactcatata aagaaacttt attgcggtat
     2401 tgaaattatt tatcaacaag caaggagtat cagcatgaaa gcaatggttt atcacggcgc
     2461 aaacgacatc cgttttgaag aaaaaccccg tccgcagatt atcgatccga ccgatgcggt
     2521 ggtgaaaatc gtcaaaacca cgatttgcgg taccgatttg ggtatttgga aaggcaaaaa
     2581 aacccgaagt cgccgacggt cgtattctcg gtcatgaagg catcggtatt gtagaagaag
     2641 tcggcgatgc tgtaaaaaac atcaaagtcg gcgataaagt cattatttca tgcgtcagca
     2701 aatgctgtac ttgcgacaac tgcaaaatcc aactttattc gcattgccgc aacggcggct
     2761 ggattttggg ctacatgatt gacggcacgc aggcagaata cgtccgcacg ccttatgccg
     2821 acaacagcct cgtgccgctg cccgacaacg tcaacgaaga agtcgccctg ttgttgagcg
     2881 acgctttgcc gaccgcacac gaaatcggcg tgcaatacgg cgatgtcaaa cccggcgaca
     2941 ccgtattcat cgcaggtgcc gctcctgtcg gtatgtccgc cttgttgacc gcccaactgt
     3001 atagccccgc cgccattatc gtgtgcgata tggacgaaaa ccgtttgaaa ctggcgaaag
     3061 agttgggcgc gacccatacc atcagccccg cttccggcga cgtctccaaa caagttttcg
     3121 ccatcgtcgg cgaagacggc gtagattgtg ccatcgaagc ggtcggtatc cctgcaactt
     3181 ggaatatgtg ccaagacatc gtgaaacccg gcggccatat cgccgttgtc ggcgtacacg
     3241 gtcaatccgt tgatttcaaa ctggaaaaac tgtggattaa aaagcttgcc atcactaccg
     3301 gcctggtaaa cgccaatacc accgaaatgc tgatgaaggc aatttccagc agctccgtcg
     3361 attacaccaa aatgttgacc caccgtttca aattcagcga attggaaaaa gcctacgacg
     3421 tgttcaaaca cgccgccgaa aatcaagcga tgaaagtggt tttggaagcg gattaatcgg
     3481 cgttgaatca gttgtttttt aagcggatgc cgtctgaatg cgtttcagac ggcatttttt
     3541 cagccgcgta gtatgggctg tccggctgct gtcgaatgaa ctgaacgtta tttttattat
     3601 gcggaaggcg gatgggcatt ttaggggcag tatgtcggag tggtgctgcc gtgtatgccg
     3661 actgcgccgc caagcggcaa aatgccgtct gagactggaa agggcttcag acggcatttt
     3721 tacgatgcgg ttcaggcttt gggtttcaat gccgccgctt ctttggcgag acgggtgatg
     3781 gtgtcccagt ctttgttttt cacggcttct ttcggcgtca gccatgagcc gccgacgcac
     3841 aggacgttgg gcagtgccaa gtaatcgggc gcggtggcga ggctgatgcc gcctgtcggg
     3901 cagaagcgaa catcggcgta agggccgtac agggctttga gcatggcttt gccgccaacg
     3961 acttcggcag ggaagagttt gagggtgtcg atgccgtgtt ccaaagccag ttggatttcg
     4021 cccggggtgg caacaccggg aatcaggggg atgccgctgt tgcggccggc tttggcgagg
     4081 gattcatgca gccccgggct gatggcgaaa accgcgcctg cgtcttcgac ggctttaagc
     4141 tgttcgggat tggttaccgt acctgcgccg acgatggcgt tgggcacttc tttggcaatc
     4201 aggcggatgg catcgaggcc gacaggggtg cgcagggtga tttcgagggt agggatgccg
     4261 ccttcgacaa gggcgtggga caaatcgatg gcggtgctta agtcgtcaat cgccattacc
     4321 ggcacaactg cgccggcggt caaaatttcg cggggggtca gtttggacat ttcggttctc
     4381 cgggtggaat ggggtatttt attaagatgg gacaggtcgt aggtcggatt caagaaaccg
     4441 acatcttgga cggctgtgtc ggattcgaga atccaaccta cgtctatctt aaaacacttg
     4501 aataattttt cagacggcct tcggtctgaa aaggccgtct gaaacgcgca tcaggcaaat
     4561 tcgccgccga agctcatcgc gccggtttcg gcgctgctgg tcatgctgcg gaagttggcg
     4621 aaaagttcgc ggccgcagcc ttgttggttc gcgcccaagt cgatgctttc gacttcgcgg
     4681 gcattccatt cggtttcgtt aatcaggacg ttgagttcgc cgctaacgga gtcgaagcgg
     4741 atcaggtcgc cggtacggat tttggcgatg ttgccgccca tcagggcttc gggcgtcatg
     4801 tggatggagg ccggaacttt gccggatgcg ccggacatac gaccgtcggt cagcagtgcc
     4861 actttgaagc cgcggtcttg caggatgccc aaaggcgggg tcagtttgtg caattcgggc
     4921 ataccgttgg cacgcgggcc ttggtagcgg acgacgcaca caaaatcgcg ttccaactcg
     4981 ccgcgttcaa acgcagccaa cacttcgcgt tggtcgttga acacgatggc aggcgcttca
     5041 ataatgcggc agccttcgcg cacggcggac actttaatca cgccacgtcc gatgttgcct
     5101 ttcatcaggc gcagaccgcc gtcgggggag aacgggttgt cagctttacg caggatgtcg
     5161 tcgttgccgc tggtttcggg ggcttcgcgc cattcgagtt tgccgtcgat gaggaaaggc
     5221 tctttggtgt agtggcgcat accgtgtccg acgacggtat cgacatcgtc gtgcaacagg
     5281 cctgcattca gcaattcgcg gataacgaaa ggcagtccgc ccgctgcggt aaagtgattc
     5341 acgtcggcct tgccgttcgg ataaacgcgg atgagtagtg ggatgatgga ggaaatttcg
     5401 tcgaagtcgt cccagttcaa aatcacgccg gccgcacgcg ccatagcgac gaggtgcatg
     5461 gtgtggttgg tcgaaccgcc ggttgccatc aggccaatca aggcgttgat aaaggatttt
     5521 tcggtcaaca tttcgcccaa aggtttaatc gtgccgtttt tgatgccgcg cgcgaggtgt
     5581 ccggcggcgt agcgagtcag cgcttcgcgc aggtcggtgt aagggtggac gaaggcggcg
     5641 gcaggcaggt gcacgcccat catttccatc atcatttggt tggagtttgc cgtgccgtag
     5701 aaagtgcagg tgcccgggct gtggtaagaa cccatttcgc ttttcaaaag ttcgttgcgt
     5761 ccgaccttgc cttcggcgaa aagctggcgg gtgcgggctt tttctttgtt gccgataccg
     5821 ctggacatcg ggcctgcggg gacgaagata cccggaatat gaccgaacga aagcgcgcct
     5881 atcatcaaac ccggaacgat tttgtcgcat acgcccataa acaggctgcc gtcaaacatt
     5941 tgatgcgaca gcccgacggc ggtactcatg gcaatcacgt cgcgggagaa cagcgacagt
     6001 tccatgccgg cgtagccttg cgtgatgccg tcgcacatgg cgggcgtgcc gccggcgact
     6061 tgggcggtcg cgccgttttt ctgcgcttcg tctttgattt ggtcagggaa gtctttaaac
     6121 ggctggtgtg cggaaaccat gtcgttgtag gcggtgatga tgcctaagtt ggggacggtt
     6181 tcctgaagca tttcgatttt gatactttta ggcatggcag catagccgtg tgccaagttg
     6241 ctgcagccga gctggttgcg ctctaagcgt cccatttgtt tggcactgcg gatcttcgcc
     6301 agatattttt cacgcgtcgg acggctgcgt tcaataatgc gcccggtgat ttcggcgagt
     6361 ttggagtgga taggagtagt gttcacggtc ggtctcctgt cggaacgggg ggtattgggg
     6421 atttgtttgt gcgtttctga tttttgtatc gggtattcag acggtaagta tagtggatta
     6481 acaaaaacca gtacggcgtt gcctcgcctt gccgtattat ctgtactgtc tgcggcttcg
     6541 tcgccttgtc ctgatttttg ttaatccact atattttaaa aggtatgccg tctgaaagtg
     6601 ggaagcgggt gttattatag tacaaaattt gtaattttgt tacaaaaaaa tcagacatcg
     6661 aaaagaaatt tgatttaaat cgcagaatct ttcgattgtt gtaacggaat aggggaaacc
     6721 tgcccgattt ttggactagg tcaaataaat tgtaaaaatg ggaatagaca aaaagtgtag
     6781 cggtgtgtag tattactact cattatgccg cctgcctttg tttccgatat tgcgatgcag
     6841 cgtgatgggg aaaacaggtt tcaaacggca tcgaaaaatt ctttcctgac gagataatac
     6901 gatgagtaca caaacaaatt ttgatttggt gttgttcggt gcgaccggcg atttggcgat
     6961 gcgcaagctg ttgccctgtc tgtaccaggc gcatgttgcc ggtctgcttc atcccgaagg
     7021 gcgtattttg ggggtcagcc gcagcgagtt ggataccgaa ggttttctgg cgaaggtgga
     7081 aaccagttcc aaaatccatg tgaaagaaaa tttttccgat gaggcttggg catcgtttgt
     7141 cgaacgtttc gcatatctca aagtcgatgt tacgcagccg gacgattttg ccgctttggg
     7201 cgatttggtc aaagcgcgca aagaaaccga caatgtcgtc atctatcttt ccaccgcgcc
     7261 gaaattcttc gcgcaaacat gtgaaaacct tgccaaaatc ggtttgaacg ccgacaacgt
     7321 gcgtgtggtt ttggaaaaac cgttgggtac ggatttggct tcttcccagc aaatcaatac
     7381 cgatgtcgcg cgttatttca aagaagggca aatttaccgc atcgaccact accttggcaa
     7441 agaaagcctg caaaacctgc ttgcgctgcg ttttgccaat gtaatgttcg agccgctgtg
     7501 gaacaataaa tacatcgaaa gcgtgcagtt gaccatcgcc gagcagttgg gcgtggaaga
     7561 acgcggcgag ttttacgaca ttaccggcgc gttgcgcgat atggtgcaaa atcacttgat
     7621 gcaaatgctg tgcatgactg cgatggaagc ccccgccagc ttggatgccg acgcggtgcg
     7681 cgatgaaaaa gtcaaagtca tcaagtcatt gaagccgctg accgtcgaat ctgtcaatga
     7741 aaatgtcgtg cgcggacaat ataccgccgc caaaggcatg aacggctatc ttgaagaaat
     7801 caacgttccg caagacagct ttaccgaaac ctacgtcgcc attaaagccg aaatcgaaaa
     7861 cgaacgctgg aagggcgttc ccttctacct gcgtaccggc aagcgcatgg cgggcaaagt
     7921 ggcggaaatc gttttgaact tcaaagattt gaacagccat atttttgaag gcagccgcac
     7981 cgcgcccaac cggctcgtta tcgagttgca accatatgaa tccgtgcgcc tctatacgca
     8041 gatgaaaacc ccgggggcag gaaataaggt cgaaaccgtg ccgctggcaa ccgatttggg
     8101 caaagcattg gaaagccgcc gcgcggaagc ttacgagcgc ctgctgctgg atgtgattaa
     8161 cggcaaactc gctttattca accgccgcga cgaactcgaa gccgcgtggg aatatgtgat
     8221 gccgattttg gaaaactgga caaataacac cacgccgccg cacggctacg gcgcacactc
     8281 gtgggggcct gaagccgcgc gcgaactatt ggcgcgcgac ggacacaagt ggcacgaaga
     8341 gcagtaatac aataatgcgt tcagacggca tggggtttga aatgccgtct gaacgtaagt
     8401 aaa
//
LOCUS       DBBZXW010000083         8336 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.083, whole genome shotgun sequence.
ACCESSION   DBBZXW010000083 DBBZXW010000000
VERSION     DBBZXW010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8336
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.083"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..436
                     /locus_tag="ACJJD2_001635"
     CDS             <1..436
                     /locus_tag="ACJJD2_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580134.1"
                     /translation="VKEYQPPVGIFLFVCFEKCLFPDFAIPIRFCAVRCVLARTCSKS
                     DVVPVFEALIRDADFQYIFLSYNNEGLMSVGQVREIFECFGKYNLVQTEYRRFKADKT
                     ENRNHKANSIFEYLHILEKTFYSGLTKTSTALPRLSSKRTIL"
     gene            571..669
                     /locus_tag="ACJJD2_001636"
     CDS             571..669
                     /locus_tag="ACJJD2_001636"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HGG7580135.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(740..2125)
                     /locus_tag="ACJJD2_001637"
     CDS             complement(740..2125)
                     /locus_tag="ACJJD2_001637"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HGG7580136.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNIRGNQVLPKHPNGLRFTAYASDGIVLKEQVYYSTGGGFVVTGEDFERQSETEK
                     TVPYPYNSCAELLDRCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(2224..4614)
                     /gene="gyrB"
                     /locus_tag="ACJJD2_001638"
     CDS             complement(2224..4614)
                     /gene="gyrB"
                     /locus_tag="ACJJD2_001638"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HGG7580137.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSSEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDSRTIEGEELANTAKQFLLAKTVIEQESRIIDELVLHAMLHASPVDLSTAESA
                     DRSVAELNGLLDEKEVALERIEGHEGHQFIKITRKLHGNVVVSYLEPKFLNSKAYQTL
                     TQTAAALKGMVGKGAKLYKGDNEYDIDSFEGALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            4884..5756
                     /locus_tag="ACJJD2_001639"
     CDS             4884..5756
                     /locus_tag="ACJJD2_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HGG7580138.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            5844..7880
                     /locus_tag="ACJJD2_001640"
     CDS             5844..7880
                     /locus_tag="ACJJD2_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HGG7580139.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDGGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
BASE COUNT         1799 a         2281 c         2283 g         1973 t
ORIGIN      
        1 agttaaggaa taccaacctc cggttggtat ttttttgttt gtatgctttg aaaaatgttt
       61 gtttccggat tttgccattc ccatccggtt ttgcgctgta cgatgtgttt tagcgcggac
      121 ttgctcaaaa tcggatgtgg ttccggtatt tgaggctttg attagggatg cggactttca
      181 atatattttt ctcagctaca acaacgaagg cttgatgtct gtcgggcagg taagggagat
      241 ttttgagtgt ttcggcaaat ataatttggt tcaaacggaa taccggcgtt ttaaggcaga
      301 taagacagaa aaccgtaatc ataaggcaaa ttcgatattc gaatatctgc atattttaga
      361 aaagaccttt tatagtggat taacaaaaac cagtacagcg ttgcctcgcc ttagctcaaa
      421 gagaacgatt ctctaaggtg ctgaagcacc aagtgaatcg gttccgtact atttgtactg
      481 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctataaaaat tcttgccgga
      541 tgctgcaaac aacgccggtt tgcattcctg atggcggtgg ttttcttaga cgaacgcccg
      601 aacacgcagg aatggatagg cttggggctg gttacggcgg gcgtgttgac gctggcactg
      661 aaacggtaaa gccgcaagaa ataaatgaaa tgccgtctaa aaaactgttt tcagacggca
      721 ttttcgtttc tgtccatcct cagcactcga ccacgcgcac ggatacgggg acggcttttt
      781 tccggagcgt ggcggcgagt ccggcaagcg aggtttcttt gtaggtcgcc ttcatatccc
      841 ggccggtttg cagcatggtt cggatgactt cgtcgagcga gacttttttg tccgtgccgt
      901 cttctaaaag cgcgagcgtg ccgagtttga gggctttttc ggcggcgatg ccgttgcgct
      961 cgatgcaggg gatttgcacc agtccgccga cggggtcgca agtcagcccc aaatggtgtt
     1021 ccatcgccat ttcggcggcg ttttccactt gtttgggcgt gccgccgatg acttcggcgt
     1081 atgcgcccgc cgccatcgaa cacgctacgc cgacttcgcc ctgacagccg acatccgcac
     1141 cggaaatgga ggcgttggtc ttgtagagga tgccgattgc gcctgcggtg agcaggaagt
     1201 tttcgacgcg ttcctgtgtg gcgtgcggat tgaacttgcg gaaatagtgc aatacggcgg
     1261 gaatgatgcc tgccgcgccg ttggtcggtg cggtaacgac gcgtccgccg gcggcgtttt
     1321 cttcgttgac cgccatggcg tacaccatcg gccagagctg ggtgttgacg atttcggttt
     1381 cgcgcaggac tttgagcttg gcggcaagct gcggggcgcg gcggcggacg ttcaatccgc
     1441 cgggcagttc gccgtccgca cccaagccgc gtttgatgca gccttccata acctcggcaa
     1501 cggcagcggc gcggcggcgg atttcggctt cgccgcatcc ggcaagcgcg gcttcgtttg
     1561 ccaacacgac ttcggagatg tcgagccggt tcagacggca tcggtcaagc agctcggcac
     1621 aactgttgta aggataagga acagtttttt ccgtttccga ctgccgctcg aaatcttctc
     1681 cggtaacgac aaacccgccg ccggtcgagt aataaacctg ttctttcaag acgatgccgt
     1741 ctgaagcata ggcggtaaat cgcaggccgt tggggtgttt gggcagcact tgattgccgc
     1801 gtatgttcag gtcgcggtcg gggatgaagc ggatttcttg cccgttgagc cggaggatgt
     1861 gctgcgtgcg gatgcgttcg aggcgttcgg gaatgccggc aagcgggatg tcgtgcggca
     1921 ggctgccttc caaaccgagc atcagcgcgt caaatgtacc gtgtccgtat ccggtcagtg
     1981 cgagcgagcc gtaaatgtcg atgacgatgc gaacagcctg tgcatccaaa cctgccgcaa
     2041 aggcggcggc tgccttcatc gggccgaccg tatgcgaact ggaaggcccg ataccgattt
     2101 tgaaaatatc aaaaatgctg accatggttt tgctccgaaa ggcggtttca gacggcatgg
     2161 cttccgtttg acaaaccaaa aggagacgcg gcacgatgcc cgtctccttt tttaaaacgg
     2221 cacttatgcg tcgatatttt gggcaatcag cgcgttgttt tcgataaagg cgcggcgcgg
     2281 ttcgacctcg tcgcccatca gggtaacgaa tacttcgtcg gcggcaatgg catcttcgat
     2341 gcgcactttc aacaggcggc gcacggcggg atccatcgtg gtttcccaca gctgttcggg
     2401 gttcatctcg cccaagcctt tgtatcgttg gatggacata cctttttggg caacgctcat
     2461 caagatgtcc aaagcgcctt caaagctgtc gatgtcgtat tcgttgtcgc ctttgtagag
     2521 cttcgcccct ttgccgacca tgcctttaag tgcggcggcg gtttgggtaa gggtttgata
     2581 ggctttgctg ttgaggaact taggctcgag gtagctcacc accacattgc cgtgcagctt
     2641 gcgtgtgatt ttgatgaact ggtgtccttc gtggccttcg atacgttcga gcgcgacttc
     2701 tttttcgtcc aagaggccgt tcaattcggc aacggagcgg tctgcgcttt ctgctgtgct
     2761 gagatcgacc ggcgaagcat gtagcatggc atgcaggacg agttcgtcaa tgatgcggct
     2821 ttcttgctcg atgacggttt tggccaacag gaattgtttg gcggtattgg caagctcttc
     2881 gccttcgatg gtgcggctgt ctgaaacgat tttggctttt tccaaggcta aaccgagcag
     2941 ccattggtct ttttccaatt cgtctttgag atatcgttct tgtttgccgt atttggcttt
     3001 gtataaaggc ggctgggcaa tgtagatgta gccgcgttcg accagctcgg gcatttggcg
     3061 gtagaagaag gtcaggagca gggtgcggat gtgcgcgccg tccacgtcgg catcggtcat
     3121 gatgatgatg cggtggtaac gcagtttttc ggcattgaat tcttctttgc cgatgcccgc
     3181 gcccaacgcg gtaatcaaag cggctacttc ctgactggcg agcatttttt caaagcgcgc
     3241 tttttcgacg ttcaaaatct tgcccttaag cggcaaaatc gcttggaatt tgcggtcgcg
     3301 cccctgcatg gcggaaccgc ctgcagaatc gccctcgacc agataaagtt ctgacaatgc
     3361 ggggtctttt tcttggcagt cggcgagttt accgggtagc cccaagccgt ccattacgcc
     3421 tttgcggcgg gtgatttcgc gggctttgcg ggcggcttcg cgcgcgcggg cggcatcgac
     3481 gattttgccg gtgatgattt tggcttcgtt cgggttttct tcaaggaagt cggtcagcgc
     3541 ttggttgatg acttcgttga caacggggcc gatttcgctg gaaaccagtt tgtctttggt
     3601 ttgggatgag aatttggggt cgggcagttt gacggacaac acgcaggtca aaccttcgcg
     3661 catatcgtcg cctgctgttt ccactttggc ttttttggcg acttcgttgg cttcgatgta
     3721 gctgttgatg gtgcgtgtca tcacttggcg caacgcggtc aagtgcgtac cgccgtcgcg
     3781 ctgagggatg ttgttggtga agcactgcac gctttcttgg tagctgtcgt tccactgcat
     3841 cgcgcattcg acgctcatgc cgtctttctc gccgaacgca tagaagattt tttcgtgcaa
     3901 cggcgttttt ttgcggttca tgtattgcac gaaaccggcc acgccgccgg aaagggcgaa
     3961 gctttcgtgt ttgccgtcgc gttcgtcggt caattcgatg tccacgccgt tgttcaggaa
     4021 ggaaagttcg cgaatgcgtt tggcgaggat gtcgaagctg tattcgacgt tgccgaaagt
     4081 ttccgtgctg gcgaggaagc gtacggtcgt gcctttcttg tcggaatcgc cgacaacttt
     4141 cagcggctct tcggtttcgc cgcgcacgaa gcggacgaag tgttctttgc cgtcgcggta
     4201 gatggtcagc gtaacccagt cggacagcgc gttgacgacg gacacgccca cgccgtgcag
     4261 gccgccggag attttgtagc tgttgttgtc gaatttaccg cccgcgtgca agacggtcat
     4321 gatgacttcg gcggcggagc gtccttcttt cgggtggatg ccggtgggca taccgcgccc
     4381 attgtcggcg acgctgacgg aatggtcggc gtggatggta acggtgattt tgtcgcaatg
     4441 tccggcgagt gcttcgtcaa tggcgttgtc caatacttcg aacaccatgt ggtgcaggcc
     4501 gctgccgtcc tgcgtgtcgc cgatgtacat accggggcgt ttgcgtaccg cttccaagcc
     4561 ttcgagcacc tgaatgctgt cggcgccgta ttcttcgtgt ttttgttcag tcatattttt
     4621 tgccggattt tgaaaagatt ttgcgatgcc gccaaaacaa gtccgcacct tgtggaaaaa
     4681 gcgggcggga cgacatatat aattgtgtat tatagccgat tttgccgcct aattcagcgt
     4741 tatccgcatc agtgtgccgc cgggaaaaga tgaaacggta cgtttgcctc cggcatcagg
     4801 tcggggattg tcccgtaaag tggcaaaagc gtttttttgc cactaaaatc tacaccctat
     4861 acttttcgga caggggcgcg gaaatggaaa tatggaatat gttggacact tggctcggtg
     4921 ccgtcccgat acgtgcggag gcggtcgaat ccgtggcggt ggtcgcggct ttgctgctgg
     4981 cgcgcgccct tctgttgaat atccacttca aacggcatcc ggatttcggc atcgaaagca
     5041 agcggcggtt tttggttgcc agccgcaata taacgctgct tttggtgctg ttttcgctgg
     5101 catttatctg gtcggcgcaa atccaaacgc tggctttgtc gatgtttgcg gtggcggcgg
     5161 cggtcgtcgt ggcgacgaag gaactgatta tgtgtctgtc gggcagtatt ttaaggtctg
     5221 ccacccagca atactcggtc ggcgactata tcgaaatcaa cggcctgcgc gggcgcgtgg
     5281 tcgacatcaa cctgttgaac acgctgatga tgcaggtcgg tccgaacccc ttggtcggac
     5341 agcttgcggg aaccaccgtt tctttcccca acagcctgtt gttgagccac cccgtgcgcc
     5401 gcgacaatat tttgggcgac tatgtcatcc atacggtcga aatccccgtt cccatccatt
     5461 tggattcgga tgaagccgta tgccgtctga aagccgtact cgagcccttg tgcgcgccct
     5521 acatccccgc catccaacgg catttggaaa acgtgcaggc ggaaaaactg tttatcacgc
     5581 ccgccgccag accgcgcgtt acccgcgtgc cgtacgatga caaggcatac cgcatcatcg
     5641 tccgcttcgc ctcccccgtt tcaaagcggc tggaaatcca acaggcggtt atggacgaat
     5701 ttttgcgcgt acaataccgc ctgttaaatt accccgccgg ctccgaaaca ctttaacttt
     5761 ccccgaccga ccccatttcc ggcttcagac ggcatattgc cgatatgctg tctgaagcac
     5821 aacacgcaaa ggaaacccat cttatgactg acaacgcact gctccatttg ggcgaagaac
     5881 cccgttttga tcaaatcaaa accgaagaca tcaaacccgc cctgcaaacc gccatcgccg
     5941 aagcgcgcga acaaatcgcc gccatcaaag cccaaacgca caccggctgg gcaaacactg
     6001 tcgaacccct gaccggcatc accgaacgcg tcggcaggat ttggggcgtg gtgtcgcacc
     6061 tcaactccgt cgccgacacg cccgaactgc gcgccgtcta taacgaactg atgcccgaaa
     6121 tcaccgtctt cttcaccgaa atcggacaag acatcgagct gtacaaccgc ttcaaaacca
     6181 tcaaaaactc ccccgagttc gacaccctct cccccgcgca aaaaaccaaa ctcaaccacg
     6241 atctgcgcga tttcgtcctc agcggcgcgg aactgccgcc cgaacagcag gcagaactgg
     6301 caaaactgca aaccgaaggc gcgcaacttt ccgccaaatt ctcccaaaac gtcctagacg
     6361 cgaccgacgc gttcggcatt tactttgacg atgctgcacc gcttgccggc attcccgaag
     6421 acgcgctcgc catgtttgcc gctgccgcgc aaagcgaagg caaaacaggc tacaaaatcg
     6481 gtttgcagat tccgcactac ctcgccgtca tccaatacgc cgacaaccgc gaactgcgcg
     6541 aacaaatcta ccgcgcctac gttacccgcg ccagcgaact ttcagacggc ggcaaattcg
     6601 acaacaccgc caacatcgac cgcacgctcg caaacgccct gcaaaccgcc aaactgctcg
     6661 gcttcaaaaa ctacgccgaa ttgtcgctgg caaccaaaat ggcggacacg cccgaacaag
     6721 ttttaaactt cctgcacgac ctcgcccgcc gcgccaaacc ctacgccgaa aaagacctcg
     6781 ccgaagtcaa agccttcgcc cgcgaaagcc tgaacctcgc cgatttgcaa ccgtgggact
     6841 tgggctacgc cagcgaaaaa ctgcgcgaag ccaaatacgc gttcagcgaa accgaagtca
     6901 aaaaatactt ccccgtcggc aaagtattaa acggactgtt cgcccaaatc aaaaaactct
     6961 acggcatcgg atttaccgaa aaaaccgtcc ccgtctggca caaagacgtg cgctattttg
     7021 aattgcaaca aaacggcgaa accataggcg gcgtttatat ggatttgtac gcacgcgaag
     7081 gcaaacgcgg cggcgcgtgg atgaacgact acaaaggtcg ccgccgtttt tcagacggca
     7141 cgctgcaact gcccaccgcc tacctcgtct gcaacttcgc cccgcccgtc ggcggcagag
     7201 aagcgcgttt gagccacgac gaaatcctca tcctcttcca cgaaaccgga cacgggctgc
     7261 accacctgct tacccaagtg gacgaactgg gcgtgtccgg tatcaacggc gtagaatggg
     7321 acgcggtcga actgcccagc cagtttatgg aaaatttcgt ttgggaatac aatgtattgg
     7381 cgcaaatgtc cacccacgaa gaaaccggcg agcccctgcc gaaagaactc ttcgacaaaa
     7441 tgctcgccgc caaaaacttc caacgcggaa tgttcctcgt ccgccagatg gagttcgccc
     7501 tcttcgatat gatgatttac agcgaagacg acgaaggccg tctgaaaaac tggcaacagg
     7561 ttttagacag cgtgcgcaaa gaagtcgccg tcatccaacc gcccgaatac aaccgcttcg
     7621 ccttgagctt cggccacatc ttcgcaggcg gctattccgc aggctattac agctacgcgt
     7681 gggcggaagt attgagcgcg gacgcatacg ccgcctttga agaaagcgac gatgtcgccg
     7741 ccacaggcaa acgcttttgg caggaaatcc tcgccgtcgg cggatcgcgc agcgcggcag
     7801 aatccttcaa agccttccgc ggccgcgaac cgagcataga cgcactcttg cgccacagcg
     7861 gtttcgacaa cgcggcctga cggcaagggt gaagtaaaaa ataggaggat tcgatataaa
     7921 aacatccgca ccgtcattcc cgcgtaggcg ggaatccaga ccggtcggca cggaaactta
     7981 tcggataaaa cggtttcttt agattttacg ttctagattc ccgctttcgc gggaatgacg
     8041 cggaaaagtt gctgtgattt cggataaatt ttcgcaacgt ttaatttccg ttttacctga
     8101 taaatgcccg caatctcaaa tcccgtcatt ccccaaaaac aaaaaaaatc aaaaacagaa
     8161 atcccgtcat tcccgcgcag gcgggaatcc aggtctgtcg gtgcggaaac ttatcggata
     8221 aaacggtttc tttagatttt acgttctaga ttcccgcttt cgcgggaatg acggaatatt
     8281 tttgaatttg ataaaaatgc cgtctgaaac ggtcaaacaa cgcttcagac ggcatt
//
LOCUS       DBBZXW010000084         8322 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.084, whole genome shotgun sequence.
ACCESSION   DBBZXW010000084 DBBZXW010000000
VERSION     DBBZXW010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.084"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(108..1031)
                     /gene="era"
                     /locus_tag="ACJJD2_001641"
     CDS             complement(108..1031)
                     /gene="era"
                     /locus_tag="ACJJD2_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HGG7580140.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1078..1797)
                     /gene="rnc"
                     /locus_tag="ACJJD2_001642"
     CDS             complement(1078..1797)
                     /gene="rnc"
                     /locus_tag="ACJJD2_001642"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HGG7580141.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1964..2287
                     /locus_tag="ACJJD2_001643"
     CDS             1964..2287
                     /locus_tag="ACJJD2_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HGG7580142.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2335..2811
                     /gene="ribH"
                     /locus_tag="ACJJD2_001644"
     CDS             2335..2811
                     /gene="ribH"
                     /locus_tag="ACJJD2_001644"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HGG7580143.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2889..3314
                     /gene="nusB"
                     /locus_tag="ACJJD2_001645"
     CDS             2889..3314
                     /gene="nusB"
                     /locus_tag="ACJJD2_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HGG7580144.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3681..4715)
                     /gene="pyrC"
                     /locus_tag="ACJJD2_001646"
     CDS             complement(3681..4715)
                     /gene="pyrC"
                     /locus_tag="ACJJD2_001646"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HGG7580145.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVVPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDNATSELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFTSKNGARFYGIPENAGTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4775..5380)
                     /locus_tag="ACJJD2_001647"
     CDS             complement(4775..5380)
                     /locus_tag="ACJJD2_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580146.1"
                     /translation="MPSEMRMSRLMLLLSAFVLAACNAQNRQSCVRHQDFARVAVDLF
                     RSACVLTQGSFEPVSKFAAVGHFVPVGKEDLSRLPPAVAEPDVQALWTLERDGGIYYL
                     SLPRDCCSVKAERADSAVLLEHFDGLVRQPPKNTNIELRAEQSVQALFETRQISYAWR
                     ESGSPEETVLTAQTADSPDLPVQAVLNLTHRSHNGKPLILP"
     gene            complement(5381..5605)
                     /locus_tag="ACJJD2_001648"
     CDS             complement(5381..5605)
                     /locus_tag="ACJJD2_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HGG7580147.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            5714..6325
                     /locus_tag="ACJJD2_001649"
     CDS             5714..6325
                     /locus_tag="ACJJD2_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HGG7580148.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSMKPHDK"
     gene            complement(6385..7257)
                     /gene="accD"
                     /locus_tag="ACJJD2_001650"
     CDS             complement(6385..7257)
                     /gene="accD"
                     /locus_tag="ACJJD2_001650"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HGG7580149.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPESFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(7294..8079)
                     /gene="trpA"
                     /locus_tag="ACJJD2_001651"
     CDS             complement(7294..8079)
                     /gene="trpA"
                     /locus_tag="ACJJD2_001651"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HGG7580150.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
BASE COUNT         2023 a         2504 c         1982 g         1813 t
ORIGIN      
        1 atgcacagat aatatcaacc cgtttttaac aaagatattc ccgattgaaa caaaatgccg
       61 tctgaaacct gttcggacgg catttgcgta aagttcagca agaaaaacta caaacccagc
      121 tcgcgcagga agcggatgtc gtccgcccaa ccggatttga ctttgaccca gaccttcaaa
      181 aatactttgg tatcaaacag tttttccata tccaaccgcg cttcggtgga aattttcttc
      241 aaacgctccc cgcctttgcc gattaaaatc gccttttggc tttccttatc gaccaaaacg
      301 gcgatataga tgcggttcaa accgtcttcc tcttcaaact gctccacttc gacgttcatc
      361 gcataaggca attcctcgcc caaatagcgg aacaattttt cacgcacgat ttccatcgct
      421 aaaaaacgcg ccgatttgtc cgtaaccata tcttcgggat acatcggcac gctttcgggc
      481 agatacggct tgagcagctc caacaggttg gcaatccgca atccgtgttt cgcactgacc
      541 gcctccgccg ccgcaaattc aaattcggcg cgcacttggg caacaaacgc ctccagcgcg
      601 taacggtctt tcgccttgtc cttgtcgatt ttgttgacca ctaaaatgac cggcgtgtgc
      661 ttgggcagtt gtttcaacac gacacggtcg gcatcggtaa agcgcatcgc ttccacgacg
      721 aaaaccacca catccacgcc gccaagcgcc tcggtaacgt tttgattcag cctgtcgttg
      781 agcgcgttgc ggtggtcggt ttgaaagccg ggcgtatcga caaacacgaa ctgcgcggta
      841 tcgtcggtat aaatccccgt tacgcggttg cgcgtcgtct gcgccttttt gctggtgatg
      901 ctgattttct gaccgatgag atggttcatc agcgttgatt tgcccacgtt cggacgaccg
      961 acaatcgcca cgaagccgca acggtatccg ccggcggcgc gttcccctgc aaggaaggtt
     1021 tcaatatcca tattcgcttt catatccaca tttcagacgg catattcacg cgccgcctca
     1081 tttctttttc ttcttcagcg gcagcttctc ttccagccat ttcaaagcct ctttcgccgc
     1141 ctcctgttcc gccgccttgc ggctcgtccc tttggcacgg cacacgaaac ccagttcgcc
     1201 caaatcgcag gaaaccacaa acatactgtc gttggcatgg ccgatttgct cttcgatacg
     1261 gtatttcggc aaagcaaagc ggcgtgcctg caacgcctcc tgcaaagcag ttttgccgtc
     1321 ttttgcctga ttttggaaat cggcacaccg gacgcggtcg gcaaacaaat ggcgcaccac
     1381 cttttccgcc gtgttgaaat cggcatcgaa gctgaccgcc gcaaacatcg cctccatcgc
     1441 gtccgccagt atcgaaggcc gtctgaagcc gccgctcttc aactcgcccg cccccaagta
     1501 cagaccgtcg ccgacattca tttccgccgc catttccgcc agcacgccct cattgaccag
     1561 acttgcccgc aaccgcgaca actcgccctc ggtcaacttc ggaaacgtgt caaacagcat
     1621 ccgcgccacc gtataattca aaatcgaatc accgacaaac tcgaaccgct cgttgtgctt
     1681 cgcatgatgg ctcctgtgcg tcaaagcctg ccgcaaaagc gaaatatcgc ggaacgcgta
     1741 gcccagtctc ttctgtatcg ccgcgtgtgc ctgctgtttc aaaacatcgt ctttcattac
     1801 cgtcttccgc aaaaaacagc ccgaatgcgt ttccatactc caaaaataca gaaacacctt
     1861 aaggctgcaa acggcgcaca ttgtaccacc aaaccgccgc cgtctgccga caacgcacga
     1921 atcgtggtaa aatccgtaag ttttccccca acgtattccc gtaatgaacg catttgcaca
     1981 agcactttcc tcggcactcg accgctgtat cgccaccaac accgtcgcca aacaaaaccg
     2041 gcccgtcggc ttcctctacc gcgaagcccc cgtttttgaa aacgacagcg gctggcgttt
     2101 cttcagcggc gacgagaccg acgaatacac cgacgatccc gacaacttca gcatcgtcag
     2161 cctcgccgac atcgccaaaa ccaaccctga aaccgccgca ctgctttccc aacccgaagg
     2221 cagcgcatgg gagcttgccg aagacggcac attccaaacc gtcgccgact ggcagccgca
     2281 agactgaaac cttcagacgg cattccgaaa cctccgaata ccaaaggaca cccaatgaac
     2341 accatcgccc ccaacctcga cggcaaacac ctccgcatcg gcatcgtaca ggcacgtttc
     2401 accaacgaaa tcggcagcga aatgctcaaa gtctgctgcc gcaccctcca agaattgggc
     2461 gtggcagacg aaaacattac cgtcgccacc gtacccggcg cacttgaaat ccccatcgca
     2521 ctgatgaacc ttgcctcttc cgaaaagttt gacgcactga ttgccatcgg tgtcgtcatc
     2581 cgtggcgaaa cctaccattt cgagctggtt tccaacgaat ccggagcagg ggttagccgc
     2641 gtcgcactcg actacaacat cccgattgcc aatgccgtcc taaccaccga aaacgacgcg
     2701 caggcaatcg aacggattga agaaaaagcc tcggatgccg ccaaagtcgc cgtcgaatgc
     2761 gccaacctcg tcaacctgct gctcgaagaa cagtttgaag acgaagaata acaaacaggg
     2821 cgtacaccaa tacgcccttt ccgtttcaga cggcataccg tgccgcccaa ccgtttcaag
     2881 gaaaaatcat gaaaacagcc cgccgccgtt cccgcgagct tgccgtacaa gccgtttacc
     2941 aatcccttat caaccgcacc gccgcgcccg aaattgctaa aaacatccgc gaaatgcccg
     3001 actttgccaa agcggacgaa gaattgttca acaaactttt cttcggtacg caaaccaacg
     3061 cagcggacta catccaaaaa atccgccccc tgctcgaccg cgacgaaaaa gacctcaatc
     3121 ccatcgaacg cgccgtcctg ctgaccgcct gccacgagct gtccgccatg cccgaaacac
     3181 cctaccccgt catcatcaac gaagccatcg aagttaccaa aaccttcggc ggcacggacg
     3241 ggcacaaatt cgtcaacggc atcctcgaca aactcgccgc ccaaatccgc cccgacgagc
     3301 ccaaacgccg ttgatgcatc acaaatttaa agaaagttct atgtccttat ttctgctttc
     3361 tttgtttcgt cattcccacg caggtgggaa tttggttttt tgaattttgg gtatttcaaa
     3421 taaattctga aacttcaatc tcgtcattcc cgcgcaggcg ggaatccggt tttttgagtt
     3481 gctgccgttt ttgataaact ttggtcgcat cgaatttctg gattcctgcc ttcgtgggaa
     3541 tggcgaaatt tgaaaattgt gggaatttat cggaaataac cgaaacgtaa caaactcaaa
     3601 cgccgttgac gtatcaatca gtcagcaaca caaatgccgt ctgaaaaacc tttcagacgg
     3661 cattttgctt gaccgttcaa tcaatactgt accgtccagc cgatttcgcc gcccgcgcgc
     3721 atcgggacaa gttcgccgtc gccgtaggga acacttgcgg ggacggtttg gctttgtttg
     3781 acgagggtga tcgtgccggc gttttccgga atgccgtaaa accttgcgcc gtttttcgag
     3841 gtaaaggctt cgagtttgtc caacgcgcct gctttttcaa acacttcggc gtaaagctcg
     3901 atggcggtca tcgcgctgaa cataccggcg caaccgcagg cgttttcttt agcggatttg
     3961 gcgtgcggcg cggaatctgt gccgaggaag aatttgtgcg ccttctcgcc ggtaacggcg
     4021 gcaaccaatg cctgacggtg ggtttcgcgt ttgagtacgg gcaggcagaa atgatggggg
     4081 cgcacgccgc cgaccaagag gtcgttgcgg ttgagcaaga ggtgttgcgg ggtaacagtg
     4141 gcggcaacgt tgtcgcctgc ttccaaaacg aggcgggcgg cttcggcggt ggtgatgtgt
     4201 tcgaacacga ctttaagatt tggtacttgc gccaaaacgg gtttcatcac gcgcccgata
     4261 aaggcggctt cacggtcgaa gatgtcgatt tcggggtcag ttacttcgcc gtgaacaagg
     4321 aacaggatgc cctgtttcgc catttcttcc aaaacgggga taagtttgaa caggtcggtt
     4381 acgccggaat cggaattggt ggtcgcgccg gcggggtaga gtttgaaggc aacgatgccg
     4441 gcagctttgg cttcgcgtac aagttcggac gtggcgttat cagtcaaata aagcgtcatc
     4501 aacggctcaa acgcgctgcc ttcgggcaac gccgccataa tgcgcgcttt gtaggcaagc
     4561 gcgtcggcaa cgctgacgac aggcggtttg agattgggca taatcacggc gcgccccatc
     4621 tgtctggcgg tataaggcac aacggctttg agcgcgtcgc cgtcgcgcag gtgcaggtgc
     4681 atatcgtcgg ggcggataat ggtcagggtt tgcatggttt tcctttgttt tatttgaatg
     4741 ttcagacggc atgccgactt tatgccgtct gaagttaggg gagaattagg ggtttcccgt
     4801 tgtgggaacg gtgcgtcagg ttcaaaactg cctgtacggg caaatccggg gaatcggcgg
     4861 tttgtgcggt caatacggtt tcttcggggc tgcccgattc ccgccaggca tagctgattt
     4921 gcctggtttc aaacagtgcc tgcaccgact gttcagccct caattctata ttggtatttt
     4981 tcggcggctg tcggacaagt ccgtcaaaat gttccaaaag cacggcactg tctgcccgct
     5041 cggctttcac actgcaacag tcgcgcggca ggctcaaata ataaatgccg ccatcgcgtt
     5101 caagcgtcca caacgcctgt acatcgggtt ctgcaacagc gggcggcaga cgggacaggt
     5161 cttcctttcc gacagggaca aaatgtccga cagcggcaaa cttggaaact ggttcgaaac
     5221 tgccttgagt caggacgcag gcactccgaa acaaatcgac ggctacacgt gcgaaatcct
     5281 gatgccgtac acaggattgc cggttttggg cattacacgc agcaagcaca aatgccgaca
     5341 gcaataacat caatcgggac atccgcattt cagacggcat ttatttgtgc ttgacgacca
     5401 gcgtgaacac gccgtcctgt tcggaagcat ccaacagcac atgaccggtt tggcggcaaa
     5461 aagcctcaaa atcccccggt gcgccgccgt cggttgccag aacggtcaac acgtcgccct
     5521 gctgcatttg cgccaaagcc tttttcgccc gcaaaatcgg caggggacat ttcaatccgg
     5581 ttacgtctaa agtttcgctg ttcatcgttt gtaccgttta aaaaatggga atcgggggga
     5641 gattataccc cagttgcttg cagccccctt tgccaaccca taaaataacg ccgttttcaa
     5701 tttggagaaa cttatgcgcc gcaccgccct cctgctgctc gcactcaccg ccggcacgtc
     5761 ccttgctgcc ggcttcaacc aaaaagacac gccgatcaac acccgctacc gcgaaacgcc
     5821 cgaagaagcc gccgcccgcg aatttaaaga acataccgcc aaactgccgc cgctgcccga
     5881 tacgcactcg gacggctggt ttgacattta tgtggatgaa aattacggca aacagccgaa
     5941 aatcctgctc gacagcctgc aaattatgcc cgcgcccgac ggcagcatcc gctacattct
     6001 caatatccgc tccgacaaag gctacgacaa cctgactgcc gaaggcatat tctgcgcccg
     6061 cttctccatc aggttcggca acggcaaacc ttcctcctat aaagtgttcg gctacggcga
     6121 cacggtcaac cgccgctgga tacagccccg aaacgccgaa tggaaaccga taggcggtac
     6181 attaagccgc aacgacgcac tgcgcaccgt cctgtatcag gcattctgcg agggcggtgt
     6241 acccgccgac acgaaaggtt tggtacaacg cctgaaagaa cgtgccggac gctatgcccc
     6301 gtcgatgaag ccgcacgaca aataaccaga cacaaaaata ccgtctgaaa catcggtttc
     6361 agacggtatt cgattcatca gccatcaagc ggcggaaact ttgtcctgac ggcacaacag
     6421 cgtaatcaaa tcactgatgc gccgcttcat atcgcggcgg tcgacaatct ggtcgattgc
     6481 gcctttttcc agcaggaact cggcgcgttg gaagctttcc ggcagcgttt cgcgcaccgt
     6541 ctgctcaatc acgcgcggac cggcaaaacc gatcagcgcg ttcggttcgg caagcacgac
     6601 atcgcccaaa aatgcgaagc tggcggatac gccgcccata gtcggatcgg tcaacaccga
     6661 tataaatggc aggcgttttt ccgtcagcaa atgcagcgcg gcactggttt tcgtcatctg
     6721 catcaatgag ttcacaccct cctgcatacg cgcaccgccg gaagccgcca cacagacgaa
     6781 cggacaattg tcggcaaccg cccgacggat accttgtacg aatcgttcgc ccacaaccga
     6841 acccatcgaa ccgccgataa agcggaattc aaacgcggca acgacgacgg gcagaccgtt
     6901 catcttgcct ttcattacca ccaaagcatc atcttccccg gtcagcttgc gtgccgcact
     6961 caaacgatcc ggatattttt tgccgtcttt aaacttcaaa ggatcggtcg gtttgacatt
     7021 tccggcaacc tcctctctgc catcctcatc caaaagcaga ttcaggcgtt gtcgtgccga
     7081 caacggattg tggtggttgc atttcggaca aacctgattg ttctgctgca actcggtcga
     7141 ataaacggtt gccgaacaag acggacattt gtgccacaaa ccctcgggaa cattggaaga
     7201 accgtctttg ctgcggtttt tgattttggg tggcaggatt ttatctaacc agctcatgga
     7261 caactcctaa aatatttaga atgcgtgaca gaatcagcgc acggcatcct tcaactcttt
     7321 gaccaaagca ccgacggccg cagcctcgtt gcccgcattg ttttcaatct ctttcacaat
     7381 ccggctgccg acaatgaccg cgtcggcaac ccggccgatt ttgcgcgcgc tttccgcatt
     7441 gctgatgccg aaaccgacac cgatgggaat atcgatatac tgatgcaaat actctatttt
     7501 acgcgaaacc tcatccgtat ccaaacttgc cgcgcccgtt acgcccttga gcgaaacata
     7561 atagacaaat ccgcctgcca gctcggcaat ggttttaata cggtcttccg tcgtcgtcgg
     7621 cgcaatcagg aaaatacagt cgaccccgtt atccttcagc tcgcgataga gcggatcgat
     7681 ggtttcgaca ggggaatcca ccgtcaacac gccgtccaca cccgccattg cggcttcctg
     7741 agcaaactcc cgataaccca tcttatgtac agggttcaaa tatcccatca aaacaaccgg
     7801 cgtttgcgtg tcggtttcac ggaattttct gacgacatcc aagacatcgc gcagcgaaat
     7861 cccgtttgcc aacgcccgct ccgccgcacg ctgaataacc ggtccatccg ccatcggatc
     7921 ggaaaacggc acgcccaact ccaaaatatc cgcaccgttt gcaaccatgc cgtgcatcaa
     7981 tgccaaagtt gtccgaatat cggggtcgcc caccgtaata tagggaatca atgcctttcc
     8041 gccatccaaa gcggcaaaag cctgccggat tctgctcatt tgtctcttcc atcctatcgg
     8101 caaatatgcc ataaaacaca atcagtaaat ttttcccagt ataacatttg cggtacggat
     8161 aggcgaatac ggcaaacaga aaccacgcaa atcagagccg ccgtttgaac gaggcggaaa
     8221 taaacggcaa gcatctcgga ttatagtgga ttaacaaaaa tcaggacaag gcggcgaagc
     8281 cgcagacagt acaaatagta cggagccgat tcacttggtg ct
//
LOCUS       DBBZXW010000085         8315 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.085, whole genome shotgun sequence.
ACCESSION   DBBZXW010000085 DBBZXW010000000
VERSION     DBBZXW010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8315
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.085"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(409..2205)
                     /locus_tag="ACJJD2_001652"
     CDS             complement(409..2205)
                     /locus_tag="ACJJD2_001652"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HGG7580151.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGILSDMVSLTGKRTLAQSLAAKNIRIEHPDGLLDQVWTSRPAIPAETVFVH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPSAEQKSDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2663..3916
                     /locus_tag="ACJJD2_001653"
     CDS             2663..3916
                     /locus_tag="ACJJD2_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG7580152.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            4071..5582
                     /gene="lysS"
                     /locus_tag="ACJJD2_001654"
     CDS             4071..5582
                     /gene="lysS"
                     /locus_tag="ACJJD2_001654"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HGG7580153.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5766..5996)
                     /locus_tag="ACJJD2_001655"
                     /pseudo
     CDS             complement(5766..5996)
                     /locus_tag="ACJJD2_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311460.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6000..6878)
                     /locus_tag="ACJJD2_001656"
     CDS             complement(6000..6878)
                     /locus_tag="ACJJD2_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7580154.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEALDLPEGSVILGVVLEVKKRF
                     MSAAQARRRVDSDYRP"
     gene            complement(6908..8035)
                     /gene="fic"
                     /locus_tag="ACJJD2_001657"
     CDS             complement(6908..8035)
                     /gene="fic"
                     /locus_tag="ACJJD2_001657"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HGG7580155.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCITARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVAKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     DIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1836 a         2080 c         2302 g         2097 t
ORIGIN      
        1 gggaatctag tctgttcggt ttcagttatt tccgataaat tcctgctgct ttttatttct
       61 agattcccac tttcgtggga atgacgaaaa gttgcggaaa tgacggttcg ggcattcctt
      121 aaatcacccg tgtatcgctg taaatcttag agatggcgga atatagcgga ttaacaaaaa
      181 ccagtacggc gttgtcgcgc cttagctcaa agagaacgat tctctcaggt gctgaagcac
      241 cgagtgaatc ggttccgtac tattcgtact gtctgcggct tcgccgcctt gtcctgattt
      301 ttgttaatcc actatatttg cttgcggcaa gatgaaaacg gtgcgggatg ttttaggaaa
      361 ccaatgccgt ctgaaggctt tcagacggca ttttttgcgc cgtgctgttt aacgcgccag
      421 cggttcggtg cgtttgatca gccacgcttt tgccgcgcct tcggtcagcg gctcgaggcg
      481 gcggcggact tcggcgtggt agcggttgac ccagtcgatt tcgccgtcgg tcatgagggc
      541 ggtgtccatc aggcgtgtat cgatggggca gagggtcagg gtttcaaaac agaggaagct
      601 gccgaattcg gtttcttgag gggcggcgac ggcttggttg gcggcaaggt tttcaatgcg
      661 gatgccccat tttcccgggc ggtagagtcc gggttcgatg gaggtaacca tgcctttttt
      721 catggcggtt tcgggcgtgg cgggggcggc gaaggcgatg cgctgcgggc cttcgtggac
      781 gttgaggaaa tagcctacgc cgtgtccggt gccgtggccg tagtcgcatt gcgcctgcca
      841 caggggtttg cggcaaatcg catcaatcag cggcgagggg atgttttcgg ggaatacggc
      901 ttcggcaagc gcgatatggg ctttgagaac gagggtgttg tcgctttttt gttcggcact
      961 cggcgtgccg acagggacga cgcgggtgat gtcggtcgtg ccgcctttgt attgcgcgcc
     1021 ggagtcgatg agcaaaagcc cgttgccgct gatggtgctg tggctttcgg gcgttgcgct
     1081 gtaatgcggc agtgcgccgt tggcgttgaa gcctgcgatg gtgtcgaaac tcaatgaaat
     1141 gaagcctggg cgcacgctgc ggtggcgata aagcatggtg tccacgtcga tttcggtcag
     1201 gctgccgccg ttgccgatga tgtcttcaaa ctcggcgaag aaaccgcaca acgccgcgcc
     1261 gtcgtgttcc atcgcttcgc ggatgcgggc gatgtcggct tcggatttgc aggatttgaa
     1321 cagcgtggat gggttgattc cctcgataag gcgcacgctt tcgggcaggc gcacaagcgt
     1381 gctgacggcg gttttgttcg gttcgataag cagcgcgccg ccgatttgcg cgagtttgtc
     1441 ggcaacttgg gcataaggtt cgaccgtgat gcctgcggtt tgcagcgcgg cggcggcttc
     1501 ggcgttcaga cggcatcggt cggtaaacag gacggcgttg tctttgccaa tcagcaggaa
     1561 ggacacgaaa acagggttga aaggtacgtc gctgccacgc aggttggtca gccaggcgat
     1621 gtcgtcgagc gaggaaacca agtggtaatc cgcgcctttt tccgccatca cggcgcgcac
     1681 gcgggcgagt ttttcggcgg cggtttcgga gacgtaggcg gggtcgtgga cgaacacggt
     1741 ttcggcagga atggccgggc ggcttgtcca cacttggtca agcaggccgt cggggtgttc
     1801 gatgcggatg tttttggcgg cgagcgattg cgctaaagtg cgtttgccgg tgagcgagac
     1861 catatcggaa aggatgccga cggcggcgtt ttcgggcagg tttgccgcga gccattcgtt
     1921 atacggcggc acttgcccgc ttttttgcag ttcgatgccg ctgcccgcaa gctgcttggc
     1981 ggcttgttcc caatagcggc tgtccaccca tacgcccgct tcgtcggcgg taacgacgaa
     2041 tgtgccgacc gagccggtaa agcccgacaa ttcgcgccgc gcctgccaat gttcgggcag
     2101 gtattcggac aggtgggggt cggcggaagg gatgacgagt gcatccaagc cttgcgcctt
     2161 catggcttcg cgcaatgcgg acaggtaatt cgatacggta ttcataataa ttcctccaat
     2221 cgggttttgc ggcttcagac ggcatggacg gaaatctgaa atgccgtctg aaaaacataa
     2281 ccatcttatc aaatcgccag cctgctgcaa aacggacggg ctgatcggat ggtgcgtgtt
     2341 tgcgcgaaaa aagcgatgta aggttgtttg ttgtaaaatt ttaggcataa aatgtcgttt
     2401 catgcctttt tttggaagta atacggaaaa tatagtcaag tttgagcatg aagttctaat
     2461 agtgtgtgtt ggcaggtatt tggattacgt tacaatacgc gctttcatca aaatttccct
     2521 accgggcggt atcctgtttt tgaagacggt aggatttggg tttgtttggg ggcaatcccg
     2581 cccaaattgg agcaatagat agggctgtgt ccgaatatgc ggctctgtgt gttgaaacac
     2641 ggttaaaaat acggaagact ttatgtccga acaacatatt tcgacttgga aaagtaaaat
     2701 caacgcattg ggaccaggga ttatgatggc ttcggcggcg gtcggcggtt cgcacctgat
     2761 tgcctcgacg caggcgggcg cgctttacgg ctggcagatc gcgctcatca tcatcctgac
     2821 caacctcttc aaatacccgt ttttccgctt cagcgcgcat tacacgctgg acacgggcaa
     2881 gagcctgatt gaaggttatg ccgagaaaag ccgcgtttat ttgtgggtat tcctgatttt
     2941 gtgcatcctc tccgccacga ttaacgcggg cgcggtcgcc attgtcaccg ccgccatcgt
     3001 caaaatggcg attccctcgc tgatgtttga tgccggcacg gttgccgcct tgattatggc
     3061 atcctgcctg attattttgg tgagcggacg ttaccgcgct ttggatcgcg tttccaaaat
     3121 catcatcgtt actttgagta tcgccacgct tgccgccgcc ggcatcgcta tgtcgcgcgg
     3181 tatgcagatg cagccggact ttatcgagcc gacaccgtgg acgcttgccg gtttgggctt
     3241 cctgatcgcg ctgatgggct ggatgcctgc gccgattgaa atttccgcca tcaattcttt
     3301 gtgggtaacc gaaaaacaac gcatcaatcc ttccgaatac cgcgacggga tttttgattt
     3361 caacgtcggt tatatcgcca gtgcggtttt ggctttggtt ttccttgcac tgggcgcgtt
     3421 tgtgcaatac ggcaacggcg aagcagtgca gatggcgggc ggcaaatata tcgggcaatt
     3481 gatcaatatg tacgccgtta ccatcggcgg ctggtcgcgc ccgctggtgg cgtttatcgc
     3541 gtttgcctgc atgtacggca cgacgattac cgttgtggac ggctatgccc gtgccattgc
     3601 cgaacccgtg cgcctgctgc gcggaaaaga caaaacgggc aacgccgaat tctttgcctg
     3661 gaatatttgg gtggcgggca gcggtttggc ggtgattttt tggtttgacg gcgtaatggc
     3721 gaatctgctc aaatttgcga tgattgccgc ttttgtgtcc gcccctgtgt ttgcctggct
     3781 gaattaccgt ttggtcaaag gtgatgaaaa acacaaactc acatcaggta tgaatgccct
     3841 tgcattggca ggcttgattt atctgaccgg ttttaccgtt ttgttcttat tgaatttggc
     3901 gggaatgttc aaatgataac gatgccgtct gaaaccgcaa accgctttca gacggcattg
     3961 tcgcgtttat ggaaaaaaat gccgacatcg cgtaaaatat gcgcaaattt tgtgattcgg
     4021 tcaggtcgtc tgaaacagat tgcgcctgat ttattttttc ggaaaaccct atgagcgaac
     4081 aaaaccatcc gcaaaccgag ccgcagttgg acgaaaacca aatcatcgcc ctgcgccgcg
     4141 aaaaactgca caacatccgc caacagcgca acgcctatcc caacgacttc aaacgcgaca
     4201 gcttcgccgc cgatttgcac gcccaatacg gcgaaatcgg caaagaagaa ctcgatccgc
     4261 aaggcattcc cgtcaaagtg gccggccgca tgatgctgaa gcgtcaaatg ggcaaggcga
     4321 gctttgccac cattcaagac gtgtccgggc aaatccagct ttatctgaac aacaaaggcg
     4381 tgagccaaga agttttggac gacttcaacc attgggattt gggcgacatc gtcggcgcgg
     4441 aaggcacttt gttcaaaacc aaccacggcg aactgaccgt acgcgtgtcc gacatccgcc
     4501 tgttgtccaa atccttgcgt ccgctgccgg acaaacacaa aggcttgagc gatcaggaaa
     4561 ccaaataccg ccaacgctat gtcgatttga ttgccaacga agaatcgcgc aataccttta
     4621 tcaaacgcag ccaaatcatc caatccgtgc gtaattttat ggtgggcgag cattatctcg
     4681 aagtcgaaac cccgatgatg cacccgattc ccggcggcgc gacggcaaaa cccttcgtta
     4741 ctcatcacaa tgccttagat attccgcttt acctgcgtat cgcgcctgag ctgtatttga
     4801 aacgcctggt tgtcggcggc ttggaacgcg tgtttgaaat caaccgcagc ttccgcaacg
     4861 aaggcatgtc cgtgcgccac aaccccgaat ttacgatgat tgaattttac gaagccttct
     4921 ccgactacga acgtatgatg cagatggcgg aagacatcat ccgcaacgca tcgcgcacag
     4981 taaacggtac ggcaaacatc acttacaatg gcaaagaagt cgatttggaa agcccgttcg
     5041 agcgtctgac catcctcgaa gccatcaaaa aatacaatcc gcactacacc gacgagcagt
     5101 tgaacgatgc ggaatggctg aaaaaagaaa tcgtcaaaca cggtgaaagc ctgccgccgt
     5161 ccccgggcat cggcagcctg caactcgcgc tgtttgaagg ttgcgccgag ggcaagctgt
     5221 ggaacccgac tttcatcatc gattacccgg tcgaagtttc cccgttggcg cgcgcttcgg
     5281 ataccaaaca aggtctgacc gaacgtttcg aattgttcgt tgtcggccgc gaactggcaa
     5341 acggctattc agaattgaat gaccctgaag accaagccga acgcttcaaa tcgcaagtcg
     5401 cacaaaaaga cgcgggcgac gacgaagcca tgcattacga tgccgactac atccgcgcga
     5461 tggagttcgg tctgccgccg acaggcggtt gcggcatcgg tatcgaccgc ttagtgatgc
     5521 tgctgaccga ttcgcaaacc atccgcgatg tgattctgtt tccgcagatg cgccccgagt
     5581 aatcataaaa acagttgaaa tggcaatgcc gtctgaacct gattggattc agacggcatt
     5641 ttgtatggca ggattgatag tgaattaaca aaaatcagga caaggcggcg agccgcagac
     5701 agtacaaata gtacggaacc aattcacttg gtgcttcagc accttagaga atcgttctct
     5761 ttgagctaag gcgagccaac gctgtaccgg tttaaattta attcactata ttcggtttcc
     5821 aactgaccga cccattctga caaggccgac aggcgttgtt cggatttcgc cacgaacggg
     5881 ttttcggtat cccacgcgta gcctgccaaa atcgaagaaa gcatacggct gatttccggg
     5941 ctgcggtcgg gcgcgtacac gacgttttgg aagcggaaat cgtaccaacc gtccacacat
     6001 caggggcggt aatccgaatc aacacgcctt cttgcctgtg cggcggacat aaaccgtttt
     6061 ttgacctcca gcaccacacc taaaatcacg ctgccttcgg gcaggtcgag ggcttcagac
     6121 ggcctgcccg tctgataaat cagcatcctg cccgcaatat cgataacaag gtgcgcgacg
     6181 accagccgct tgtcggacag ttcaatcagt acgatgtctt cgtccgcagg gcgcatacgc
     6241 ggctcgacca ccagcaaatc ccccttttcg ataaccggcg acatggacgt gtcgggcatg
     6301 gcaacggcaa acgtgtactg cgagggggcg accaccgaag caaacaagtc gaaactgcct
     6361 gtgagtttgc ctgtacgggc gaaagccgcc gcctgacggt ctgacaacag ggggcgtggt
     6421 gtgagcctca tcgacagtgc tttgccgtcg gcatcgctgt ggttgtgcgt atgcgtatga
     6481 tggttgttga tggtcgtatc gccttggaca tcgttaagga ctatgctgtt tgaacctgcc
     6541 acggatttgg tcatctcatt gtaggcttgc gtcgtgatgc gctcttgctt ggtcatacct
     6601 gttacagcct gtttcagcat ttctaacgct atgtgattct tcctaagggt cgctataccg
     6661 gcttttgcag cttgctcatt accacaagag gggcaacccc agctacttcc tatgaacata
     6721 ttggagtacc tcgaacaggt ttggtttcca tgtttagggc agttgattac acacggcttg
     6781 gctgtaccct caaactcgac caacttaatg ccacgatgac cgaaacgttc ctcaacctca
     6841 gcagcagctt cttcaaatgt ttttgacctt cttgccatat tgacctccgg attattgatt
     6901 attttggcta tgctttaacg agggattgga atgaggtaaa gctgttgccc tctccccgca
     6961 atagttccat taggcgcgga tgaatgaata gtttgtccct gccgatggcg atttcttgca
     7021 gcacacctat gtctgaaagc tctttcaggt acttagaggc cgtctgccgt ttggctatcc
     7081 ctgccgcttc taggttggca atgcgtgtat atggctgctc aaacagaaga tttaccagtt
     7141 cgtgcgtgta gattccttgt gcgtgtgtcc gtatgtgttg acgtgtctgc tcaaacaggc
     7201 ggcgtatcgc atctattttc gctaccgtcc aatcggcggt gtcggctacg ccgtctaaga
     7261 tgtagattat ccagctttcc cagtcctgcc gttcggttac gcctaaaagc aggcggtaat
     7321 agtccgccct gttttcgata atatagcggc tcaaatacaa aataggcaaa tccaaaagcc
     7381 ctttttcaat caatagcagg ctgttcaata tgcgccccgt ccgcccgttg ccgtccgtaa
     7441 acggatggat ggcttcaaat tggtaatgtg ccgccgccat gatgataagc gggtctaaat
     7501 cgccgctttc gtgaataaac cgctcccaat ttgccagctt gccgcgtatg gtttcttctc
     7561 cttcgggcgg ggtatagaca acatttccgc tgttgcctcc ttttagggct gtgccgcctg
     7621 ttttgcggat ggccatttcg taggggtgct tgatggcgtt gcagaccatg atggcggttt
     7681 gtgtgcataa agggcggctc gtcagtgatt catagcctgc aaacagggcg gtgcggtatt
     7741 gcagggcttc tttcgtggca gggtcttgcc gttccgtatc catttgcagg gattgaaaca
     7801 gcttatccgt tgtggttacg atgttttcaa tttccgaact tgcacgggct tccataacag
     7861 gaagggtgtt aatcagcatg gcttgattcg gtatcagttc tgccgcctgc tttaaacggg
     7921 caagggatgc acgggcggtt atacaacgtt tcaggatggt tttgctttca atatcctgtt
     7981 ttggcggcag gggtggtaaa tcgttatagg gaatatcggg tttccagttg ctcatattta
     8041 aaatttcgga aaatttaaag atgtttccag tatatgttta cgccgtgtat atatcaagga
     8101 tatatgttta aaaatttggc ttttgtaaat atatgggcgg taaaaccgca ttattttatg
     8161 ttgttaccta ttttacacct tgtctgcaca cgatttccaa acaacctaaa aagaaacctg
     8221 ccgaaaggca ggtttaaaga ggtcatttta aatgtgaact aaagcttaca ccctcgtagg
     8281 gtatcgtgta tatcagacgt acttaatata cacta
//
LOCUS       DBBZXW010000086         8127 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.086, whole genome shotgun sequence.
ACCESSION   DBBZXW010000086 DBBZXW010000000
VERSION     DBBZXW010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8127
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.086"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..2004
                     /locus_tag="ACJJD2_001658"
                     /pseudo
     CDS             1..2004
                     /locus_tag="ACJJD2_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            2246..3712
                     /locus_tag="ACJJD2_001659"
     CDS             2246..3712
                     /locus_tag="ACJJD2_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7580156.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKSPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFEDRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETWSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(3913..4881)
                     /locus_tag="ACJJD2_001660"
     CDS             complement(3913..4881)
                     /locus_tag="ACJJD2_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580157.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSEAVALATPVWQKMGMHQANVLTAEYLNVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPCAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDGTNGGAQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            4959..6251
                     /locus_tag="ACJJD2_001661"
     CDS             4959..6251
                     /locus_tag="ACJJD2_001661"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HGG7580158.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGKVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            complement(6754..7440)
                     /locus_tag="ACJJD2_001662"
     CDS             complement(6754..7440)
                     /locus_tag="ACJJD2_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HGG7580159.1"
                     /translation="MYAFTDAQQQKALFRLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDGFMAANWQGIALVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(7516..7989)
                     /gene="queF"
                     /locus_tag="ACJJD2_001663"
     CDS             complement(7516..7989)
                     /gene="queF"
                     /locus_tag="ACJJD2_001663"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HGG7580160.1"
                     /translation="MSRNTEELQGISLLGNQKTQYPIGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDSQ"
     regulatory      complement(7993..8037)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
BASE COUNT         1927 a         1996 c         2447 g         1757 t
ORIGIN      
        1 gtcgggttaa tctattaaca ttatctgttt tatcgctgtt ttgcacgcca tatgtttgag
       61 gttcggatgc gtacgatccc gtcaaagaag ccgagattaa aaacaaattt attttagaag
      121 cggcggaaga cagaaattcc cacgtttggc gcggcccgtg cagtgtgtct tttgattgct
      181 tcggtgcttt cagttatcag cccggttcgg atactcgttc tacaaatatt ggcgatgctg
      241 ccgatttttc attttcagac aagccggcaa acggcgtttc ccattatttt tccagcggta
      301 aaaccgatcc aaattcatct gaagccttgt atgacgaaat caatatcacg ggtaaaaact
      361 acaatagcgg catcctcgcc gtcgataata tgcccgttgt taagaaatat gttacagaga
      421 attacggagc tgatttaaag caggcggtta aggatcaatt aaaggattta tataaaacaa
      481 gacccgaaga ttggggaaaa aaataaaaaa atagttgagg aagcgataat aaaacaatat
      541 ggaataccta gaaataaaat taataaattt agaaaagtta ttgatccaat tatagaagaa
      601 gctgtactca ctcctcatag taatacaaca ccgaccaatc tcgacaacat cttcaataaa
      661 aaattacacg tcaaaatcga aaacaaatcc cacgtcgctg gacaggtgtt ggaactgacc
      721 aagatgacgc tgaaagattc cctttgggaa ccgcgccgcc attccgacat ccatacgctg
      781 gaaacttccg ataatgcccg catccgcctg aacacgaaag atgaaaaact gaccgtccat
      841 aaggattatg cgggcggcgc ggatttcctg ttcggctacg acgtgcggga gtcggacgaa
      901 cccgccctga cctttgaaga caaagtcagc ggacaatccg gcgtggtttt ggaacgccgg
      961 ccggaaaatc tgaaaacgct cgacgggcgc aaactgattg cggcaaaaac ggcggattcc
     1021 ggttcgtttg cgtttaaaca aaattaccgg cagggactgt acgaattatt gctcaagcaa
     1081 tgcgaaggcg gattttgctt gggcgtgcag cgtttggcta tccccgaggc ggaagcggtt
     1141 ttatatgccc aacaggctta tgcggcaaat actttgtttg ggctgcgtgc cgccgacagg
     1201 ggcgacgacg tgtatgccgc cgatccgtcc cgtcaaaata tacggggtgg cgcggctgcg
     1261 gacgggcggc gcaaaggcgt gcaaatcggc ggcgaggtgt ttgtacggca aaatgaaggc
     1321 agccggctgg caatcggcgt gatgggcggc agggtcggcc agcacgcatc agttaacagc
     1381 aaaggcggtg cggcaggcag tgatttgcat ggttatggcg ggggtgttta tgctgcgtgg
     1441 catcagttgc gcgataaaca aacgggtgcg tatttggacg gctggttgca ataccaacgt
     1501 ttcaaacacc gcatcaatga tgaaaaccgt gcggaacgct acaaaaccaa aggttggacg
     1561 gcttctgtcg aaggcggcta caacacgctt gtggcggaag gcgttgtcgg aaaaggcaat
     1621 aatgtgcggt tttacctgca accgcaggcg cagtttacct acttgggcgt aaacggcggc
     1681 tttaccgaca gcgaggggac gggggtcgga ctgctcggca gcggtcagtg gcaaagccgc
     1741 gccggcattc gggcaaaaaa ccgttttgct ttgcgtaatg gtgtcaatct tcagcctttt
     1801 gccgctttta atgttttgca caggtcaaaa tctttcggcg tggaaatgga cggcgaaaaa
     1861 cagacgctgg caggcaggac ggcgctcgaa gggcggttcg gcattgaagc cggttggaaa
     1921 ggtcatatgt ccgcacgcat cggatacggc aaaaggacgg acggcgacaa agaagccgca
     1981 ttgtcgctca aatggctgtt ttgatgcgtc gggaaatgtt ttgacgtaca ggcggcacac
     2041 cggcacggca ccgcacgccg ccccgcaaac caatccgaac cctgctgccc cgaagggcgg
     2101 ggcataatga tgaaaccggc ggaaaaccgc cggttttttg ccgccgtttg aaacccgatt
     2161 ctggcttcag acggcattgt cgcggcatcg ggcggcaggg tttggaacag cggcataaaa
     2221 aactgataca atccgccgat tgataatggt tattttttat ttttgtggga agacatttat
     2281 gcctgcacga aacagatgga tgctgctgct gcctttattg gcaagtgcgg catatgccga
     2341 agaaacaccg cgcgaaccgg atttgagaag ccgtcccgag ttcaggcttc atgaagcgga
     2401 ggtcaaacca atcgacaggg agaaggtacc ggggcaggtg cgggaaaaag gaaaagtttt
     2461 gcagattgac ggagaaaccc tgctgaaaag tcccgaattg ttgtcccgcg cgatgtattc
     2521 cgcagtggtc tcaaacaata ttgccggtat ccgcgttatt ttgccgattt acctacaaca
     2581 ggcgcagcag gataagatgt tggcacttta tgcacaaggg attttggcgc aggcagacgg
     2641 tagggtgaag gaggcgattt cccattaccg ggaattgatt gccgcccaac ccgacgcgcc
     2701 cgccgtccgt atgcgtttgg cggcagcatt gtttgaagac aggcagaacg aggcggcggc
     2761 agaccagttc gaccgcctga aggcggaaaa cctgccgccg cagctgatgg agcaggtcga
     2821 gctgtaccgc aaggcattgc gcgaacgcga tgcgtggaag gtaaacggcg gcttcagcgt
     2881 tacccgcgaa cacaatatca accaagcccc gaaacggcag cagtacggca aatggacttt
     2941 cccgaaacag gtggacggca cggcggtcaa ttaccggctc ggcgcggaga aaaaatggtc
     3001 gctgaaaaac ggctggtaca cgacggcggg cggcgacgtg tccggcaggg tttatccggg
     3061 gaataagaaa ttcaacgata tgacggcagg cgtttccggc ggcatcggtt ttgccgaccg
     3121 gcgcaaagat gccgggctgg cagtgttcca cgaacgccgc acctacggca acgacgctta
     3181 ttcttacacc aacggcgcac gcctttattt caaccgttgg caaaccccga aatggcaaac
     3241 gttgtcttcg gcggagtggg ggcgtttgaa gaatacgcgc cgggcgcgtt ccgacaatac
     3301 ccatttgcaa atttccaatt cgctggtgtt ttaccggaat gcgcgccaat attggatggg
     3361 cggtttggat ttttaccgcg agcgcaaccc cgccgaccgg ggcgacaatt tcaaccgtta
     3421 cggcctgcgc tttgcctggg ggcaggaatg gggcggcagc ggcctgtctt cgctgttgcg
     3481 cctcggcgcg gcgaaacggc attatgaaaa acccggcttt ttcagcggtt ttaaagggga
     3541 aaggcgcagg gataaagaat tgaacacatc cttgagcctt tggcaccggg cattgcattt
     3601 caaaggcatc acgccgcgcc tgacgctgtc gcaccgcgaa acgtggagta acgatgtgtt
     3661 caacgaatat gagaaaaatc gggcgtttgt cgagtttaat aaaacgttct gattgctgtt
     3721 ccttttcgga ggaaaccctg ccggcggcgg tatcacggcg ggcatcggcg gctttcgggc
     3781 ggtgctttgc gtgccgccgc gtgtgcggaa acgcattccg gtttttccgg cataacggcg
     3841 atgcgaggta aaatgccgtc tgaaacccga ttcgggcttc agacggcatt gtcgcggttg
     3901 cggcaggcgg gttcaccaga ttccgtcaaa ggttttcgcg ccgcgccaaa atttccacct
     3961 gtcggcgggt ttgaaggtca gcgtaccgcc gtgttgtccg tccgtggtga tgtccagccg
     4021 tttgattttg ccggtacgga cggcttcgta aagcggtgcg aaccagcgtt cttcccactg
     4081 ctgcaatatt gccgcatacc gctccctgtc ccctgtcagg gcggtcaggc gcaaatcgtc
     4141 cataaacagg atatggtgcg tgtcaggcag gtgtgccgcc gtttcttcat aggcgcggaa
     4201 gttgtcgggc aatgcgcggc ggtcggggtg gaaacggctc caaaccgtat cggcgaaaag
     4261 tgtgccgcct tgcgcgccgc cgtttgtgcc gtcccaaagc cataagccgt tcaactcggg
     4321 cagcccgcgt tttttgcggt tatggttgac ggggtgcgcc gccagccaca tttggatttc
     4381 ggtttggacg cgcagccatt ccaacgcatc ttctccgtcc ggctgatcgt ccgcgcccaa
     4441 caatccgccc aagtccaaaa cgggcttcgc gccccagcgg tacgcgcaag gaagggaaac
     4501 cagccataat tcgggcagga cgggaacgaa acgccatgga atgtcgccgt aaaacgccga
     4561 caggtcgcgg cagagccgtt ccgcttcatc cgtaccgacg ttcagatatt ccgccgttag
     4621 cacatttgcc tgatgcatcc ccatcttttg ccagacgggc gtggcgagcg cgacggcttc
     4681 agacggcata ttcaggcttt gcgccgcgcg ttccgccagt ctgccgcacc acaaataacg
     4741 cgcgtaaaat gccgaagccg tgcagctttg gcggtgcagc gagccgtatt gcaggatttt
     4801 gttgaaggcg ggcaggcata gaggtattcg gatttcgtct tcatccaaat tgagcgaggg
     4861 gagggcgagg gtgagtttca tcgtttgacg tttcagaaat gcaggtcagg cgcaacatta
     4921 tagaggattc ggcgcaaacg ccgtcaaaaa ggaacaatat ggctgtcttc ccactttcgg
     4981 caaaacatcg gaaatacgcg ctgcgtgcgc ttgccgtttc gattattttg gtgtcggcgg
     5041 catacattgc ttcgacagag aggacggagc gcgtcagacc gcagcgcgtg gaacaaaatc
     5101 tgccgccgct gtcttggggc ggcagcggcg ttcagacggc atattgggtg caggaggcgg
     5161 tgcagccggg cgactcgctg gcggacgtgc tggcgcgttc gggtatggcg cgggacgaga
     5221 ttgcccgaat cacggaaaaa tatggcggcg aagccgattt gcggcatttg cgtgccgacc
     5281 agtcggttca tgttttggtc ggcggcgacg gcggcgcgcg cgaagtgcag ttttttaccg
     5341 acgaagacgg cgagcgcaat ctggtcgctt tggaaaagaa aggcggcata tggcggcggt
     5401 cggcttctga ggcggatatg aaggttttgc cgacgctgcg ttcggtcgtg gtcaaaacgt
     5461 cggcgcgcgg ttcgctggcg cgggcggaag tgcccgtcga aatccgcgaa tccttaagcg
     5521 ggattttcgc cggccgcttc agccttgacg gtttgaagga aggcgatgcc gtgcgcctga
     5581 tgtacgacag cctgtatttc cacgggcagc aggtggcggc gggcgatatt ttggcggctg
     5641 aagtcgttaa gggcggcaca aggcatcagg cgttctatta ccgttcggac aaggaaggcg
     5701 gagggggcgg caattattat gatgaagacg gcaaggtgtt gcaggaaaaa ggcggcttca
     5761 acatcgagcc gctggtctat acgcgcattt cttcgccgtt cggctaccgt atgcacccca
     5821 tcctgcacac atggcggctg cacacgggca tcgattatgc cgcaccgcag ggaacgccgg
     5881 tcagggcttc cgccgacggc gtgattacct ttaaaggccg gaagggcgga tacggcaacg
     5941 cggtgatgat acgccacgcc aacggtgtgg aaacgctgta cgcgcacttg agcgcgtttt
     6001 cgcaggcaca aggcaatgtg cgcggcggcg aggtcatcgg ttttgtcggt tcgacagggc
     6061 gttcgaccgg gccgcacctg cattacgagg cacgcatcaa cgggcagccc gtcaatcctg
     6121 tttcggtcgc attgccgaca cccgaattga cgcaggcgga caaggcggcg tttgccgcgc
     6181 agaaacagaa ggcggacgcg ctgcttgcgc gcttgcgcgg cataccggtt accgtgtcgc
     6241 aatcggattg aagtttgaac cggcgacgaa aacaatgccg tctgaaaatc tgcaaacagg
     6301 ttttcagacg gcatttatag tggattaaca aaaaccagta cgtcgttgcc tcgccttagc
     6361 tcaaagagaa cgattctcta agatgctgaa gcaccaagtg aatcggttcc gtactatttg
     6421 tactgtctgc ggcttcgttg ccttgtcctg atttttgtta atccaccata cagtcgatta
     6481 aaataaaact aagccaagga agcactgccg tcattcccgt accgtcggga atccggacac
     6541 cacggtacgg aaacccatcc gccgtcattc ccgcgaaagc gggaatctag aaatacaatg
     6601 cggcaggagt ttatcggaaa tgactgaaac ccaacgcacc ggattcccgc tttcgcggga
     6661 atgacgaagt gggcgggaat ccggatttat ccgttccgac agtgtttgca aataaaagaa
     6721 aacccaaccg tcccgatttc cggcagggct gttttacgga ttttgcagcg agggcgcggg
     6781 gcggtcttgc gcctgtttgg tttgcagggt cgtcagtttt ttcgtcagca gattcagaat
     6841 cacgccgtag gcgggcagga aaaacagacc gcagacggtg agtttgaaca ggtaatcgac
     6901 caaggcgatg ccctgccagt ttgccgccat aaatccatcg ctgctggcgt aaaaggcaac
     6961 ggcgaaaaat accagcgtat ccaaagcgtt gccgatgacg gttgatgcgg tcggggcaat
     7021 ccaccacgct ttcagacggc gtaatttgtt gaacacaaaa atatcaagga tttgtccgag
     7081 cgcgtaggcg gcaaagctgg ccagcgcgat gcgtccgaca aaggtgttga attcggacag
     7141 tgcgcccaag cccgtccaac tgccgttgtg gaacaaaacg gaaaagacat aggaaagcaa
     7201 aagggcgggg aacatgaccc aaaagataat ccgccgtgcc aagtgcgaac cgaaaatgcg
     7261 gacggtcagg tcggtggcaa ggaagatgaa gggaaaggaa aacgcgcccc aagtggtgtg
     7321 gatgccgaaa atttggaagg ggaactgcac cagatagttg ctggcggcga tgatgaggat
     7381 atgaaaaagc accagccgga agagtgcctt ctgttgctgt gcgtcggtaa atgcgtacat
     7441 aaaaaaacct ttcggaaagg cgttcagacg gcataccgta tcgaaagaat gccgtctgaa
     7501 agtgggaagg acggattatt ggctgtcgtg ttcgaacaag cgtttacgcg ccaatgcttc
     7561 aaactcggtg cctgctttgc cgtagttggc aaacggatga atggcgatgc cgccgcgcgg
     7621 tgtgaactcg ccgaatactt cgatgtattt cggatccatc agggcaatga ggtctttcat
     7681 gatgatgttg acacagtctt catgaaaatc gccgtggttg cggaagctga agaggtagag
     7741 tttcagggat ttgctttcca ccattttgat gtgcggaata tagcggatgt agatggtggc
     7801 gaagtcgggc tgcccggtca tggggcagag gctggtgaac tctgggcaga cgaatttgac
     7861 gaaatagtcg ttgtcgggat gtttgttgtc gaatgcttcg agaatttcag gcgcgtagcc
     7921 gatcggatat tgggtttttt gattacccaa aagcgagatg ccttgcagct cttcggtatt
     7981 gcgggacata gggtttcctt agttttttag tgtgggaggt tttcgaacca cggggcggcg
     8041 attgtaatat aagcggcggt atctgtgtag ttttcttcag acggcatggt ttggacggcg
     8101 gcgttttccg tgtcatatat agtggat
//
LOCUS       DBBZXW010000087         8018 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.087, whole genome shotgun sequence.
ACCESSION   DBBZXW010000087 DBBZXW010000000
VERSION     DBBZXW010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8018
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.087"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(68..814)
                     /locus_tag="ACJJD2_001664"
     CDS             complement(68..814)
                     /locus_tag="ACJJD2_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG7580161.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(798..977)
                     /locus_tag="ACJJD2_001665"
     CDS             complement(798..977)
                     /locus_tag="ACJJD2_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580162.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(993..1664)
                     /locus_tag="ACJJD2_001666"
     CDS             complement(993..1664)
                     /locus_tag="ACJJD2_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HGG7580163.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="ACJJD2_001667"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="ACJJD2_001667"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HGG7580164.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /gene="ispF"
                     /locus_tag="ACJJD2_001668"
     CDS             complement(2481..2963)
                     /gene="ispF"
                     /locus_tag="ACJJD2_001668"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HGG7580165.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /gene="ispD"
                     /locus_tag="ACJJD2_001669"
     CDS             complement(2995..3684)
                     /gene="ispD"
                     /locus_tag="ACJJD2_001669"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HGG7580166.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLEIGLASAD
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAISIADTLKRAEGGQISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIRPLLVQGDARNLKLTQPQD
                     AYIVRLLLNAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="ACJJD2_001670"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="ACJJD2_001670"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HGG7580167.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKRSGKLKVIRADENELAAHG
                     QYLDGLGEACIWRKEAVPSENGGTDA"
     gene            complement(4571..5881)
                     /locus_tag="ACJJD2_001671"
     CDS             complement(4571..5881)
                     /locus_tag="ACJJD2_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7580168.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRYKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="ACJJD2_001672"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="ACJJD2_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HGG7580169.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6056..6355)
                     /locus_tag="ACJJD2_001673"
     CDS             complement(6056..6355)
                     /locus_tag="ACJJD2_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580170.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            6706..7902
                     /locus_tag="ACJJD2_001674"
     CDS             6706..7902
                     /locus_tag="ACJJD2_001674"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG7580171.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTAGSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
BASE COUNT         1892 a         2399 c         1963 g         1764 t
ORIGIN      
        1 ataaatttgc cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa actttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcgctgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg cccggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcataat cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ctgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgca cgctgacttt cctgccttcc
     1321 gccgccgcac gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacaaggcga cgggaagcca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatatcgga atcggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tatgccgttt tcgagcacgc cggtgatttt gttgatttcg tcttccatcg
     1861 tcagcggctg atcgatattc aagccgtgga catcgacgat ttggttgccg taaaacgtgg
     1921 tgtagccgat acgcagttcg ggctgtccgc ccatagcgag cagtttgcgc gaaacaagag
     1981 agcgcgcgct ttcgacgact tccacaggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcatc cgcaatgcag acgaattttt cggatgcgct ggcgacgatt ttttcgttga
     2101 ggtgtgcgcc gccgccgcct ttaatcattt gcagggcgtg gttcacttca tccgcaccgt
     2161 caatatagac cgccaacccc gatacttcgt tcagggaaac gacgggaata tcatattggg
     2221 caagcagttc actggatttt ttggaagtag ataccgcgcc tttgattttt ttgccgctct
     2281 tacccaaggc ttcgatgaaa aagttgatgg tcgaaccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatcctt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacagcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg ttttgaattg aagttcagac
     3001 ggcattgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cgcgtcgccc tgcaccagca aagggcggat gcccaatttt tccacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagccccg cgcggaaaag
     3181 ctgcggcgtt tgtgcctgcc aaaggctcgt ccgctcgaca gtggcactga tttgtccgcc
     3241 ttctgcgcgt ttgagcgtat cggcaatgga aattgccaaa atcccgcctt cggcggcgtt
     3301 gcccgcctgt tctatcaacc gcgtcaaagc ttcagacggc aggcagcagc gcgcggcatc
     3361 gtgtaccaga atattgtcat ccgccgatgc caagccgatt tccaacagtt ttgccacacc
     3421 gtttcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacggcctca tgccgttcaa aaatcccaat cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatat tgcttgggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagcgcgata tttttgcgct tcatgcgtcc gtcccgccgt tttcagacgg cacggcttcc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatt gcccgtgcgc cgccaactcg
     3781 ttttcgtccg ccctgatgac tttcagttta ccgctgcgtt tggtttcggt atgcaccacg
     3841 ggtttggttt ccattttttc ctctgcggcc gcacccatca ggtcgaactg ccgccgcgtc
     3901 atagcaagat agacttcgcc caaaagttcg cagtcgatca atgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac aaggcatcca ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattgtgg
     4141 ataatcagtt ccgcaccgcg caggaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctgtatc gtcaagccgt ggacgcgtgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcca aaccggcaaa ctcgaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tgtctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc ggcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgcta ctggcggttt
     4801 gcagccaggt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcaggc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgatg gaaaacaggg caagcatcag gttgaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atagcggtaa agacgggttt gtaccgcacc gtttcacgaa
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg ggtatcggca gccttggcgg
     5281 ggacggacgg cataaacagg ctgccgaccg tgcctccgac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac aacaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtag
     5821 cgaaaagagg tgcgaaacgg cggcttttaa ccagtcccaa accgcctttt ttagcgtaca
     5881 tcgttttccc tctctttttc aatcagttta cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggtcaga tattcgttac
     6121 gcaaagttcc gacgggagct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg gatttccgtc tgaccgaacg gcgacaggac atgattttcc attccgcctt
     6241 caagtttgac ggcaaaacgc ccgctttgcg gccgtgcttc cgattcgtcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc cgtcccgatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 cgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt ccgtcaaaat gcccgacttc cgccattttc acgcaaacgc ccgattaagc
     6541 caagcaattg caaagatttt ttgctagaat agcctgcttc ttttatcaac cttttcagac
     6601 ggccccacta ctttcccgcc caggaaggca aaacggattc ggcacgaatc cggttagtat
     6661 ccgtgtccga ttccaatgcc gtctgaaact ttccggagta agaaaatgtc ccaaaaattg
     6721 atcttggttt tgaactgcgg cagctcgtcc ctcaaaggcg cggtcctgga taacggcagc
     6781 ggcgaagtcc tgctcagctg ccttgccgaa aaactcaacc tgcccgatgc ctacatcaca
     6841 ttcaaagtaa acggcgaaaa acacaaagtc gatctgtccg cacatcccga ccacaccggc
     6901 gcggtcgaag ccctgatgga agaactcaaa gcccacggcc tcgacagccg catcggcgcc
     6961 atcggccacc gcgtcgtcag cggcggcgaa ctgtacagcg aatccatcct cgttgacgac
     7021 gaagtcattg ccggcatcga aaaatgcatc ccgctcgccc ccctgcacaa ccccgcccac
     7081 ctcttgggcc tgcgtgccgc gcaaagcatt ttcaaaggcc tgcccaacgt cgtcgtattc
     7141 gatacctcct tccaccaaac catgcccgaa gtcgcctaca aatacgccgt tccgcaggag
     7201 ttgtatgaaa aatacggcct gcgccgttac ggcgcgcacg gtaccagcta ccgcttcgtc
     7261 gccgacgaaa ccgcgcgctt cctcggcaaa gacaaaaaag acctgcgtat ggtcattgcc
     7321 cacttgggca acggcgcgtc catcaccgcc gtcgccaacg gcgaatcgcg cgacaccagt
     7381 atgggcctga ccccgctgga agggctggta atgggtacgc gcagcggcga catcgatcct
     7441 tccgtattcg gcttcctcgc cgaaaacgcc aatatgacca tcgcccaaat cactgaaatg
     7501 ctgaataaaa aatccggtct gctcggcatt tccggcctgt ccaacgactg ccgcaccatt
     7561 gaagaagaag ccgccaaggg gcataaaggc gcgaaattgg ccttggatat gtttatctac
     7621 cgccttgcca aatacatcgg cagtatggcg gttgccgcag gcggtttgga cgcactggtc
     7681 tttaccggcg gcatcggcga aaactccgac atcatccgcg aacgcgtgat cggctacttg
     7741 ggcttcctcg gtctgaacat cgaccaagaa gccaacctga aggcacgctt tggcaacgcc
     7801 ggcgtgatta ccactgccgg cagcaaagcc gttgccgtgg tcattccgac caacgaggaa
     7861 ttgatgattg cacacgatac cgcccgcttg agcggtctgt aagattcaat ccccacgcga
     7921 actgcctccg aaaacggagg cagttttttt atccggcttt ccatgcttaa acagcaccgc
     7981 ctcttttcag acgttgacgg ttgcagccgc ttacctga
//
LOCUS       DBBZXW010000088         7908 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.088, whole genome shotgun sequence.
ACCESSION   DBBZXW010000088 DBBZXW010000000
VERSION     DBBZXW010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7908
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.088"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(197..268)
                     /locus_tag="ACJJD2_001675"
     tRNA            complement(197..268)
                     /locus_tag="ACJJD2_001675"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(233..235),aa:Arg,seq:cct)
     gene            complement(288..734)
                     /locus_tag="ACJJD2_001676"
     CDS             complement(288..734)
                     /locus_tag="ACJJD2_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HGG7580172.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(739..1713)
                     /gene="ispB"
                     /locus_tag="ACJJD2_001677"
     CDS             complement(739..1713)
                     /gene="ispB"
                     /locus_tag="ACJJD2_001677"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HGG7580173.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            1937..2245
                     /gene="rplU"
                     /locus_tag="ACJJD2_001678"
     CDS             1937..2245
                     /gene="rplU"
                     /locus_tag="ACJJD2_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HGG7580174.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2270..2542
                     /gene="rpmA"
                     /locus_tag="ACJJD2_001679"
     CDS             2270..2542
                     /gene="rpmA"
                     /locus_tag="ACJJD2_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HGG7580175.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            2931..4115
                     /gene="ubiM"
                     /locus_tag="ACJJD2_001680"
     CDS             2931..4115
                     /gene="ubiM"
                     /locus_tag="ACJJD2_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HGG7580176.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKARLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(4372..4527)
                     /gene="rpmG"
                     /locus_tag="ACJJD2_001681"
     CDS             complement(4372..4527)
                     /gene="rpmG"
                     /locus_tag="ACJJD2_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HGG7580177.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(4559..4792)
                     /gene="rpmB"
                     /locus_tag="ACJJD2_001682"
     CDS             complement(4559..4792)
                     /gene="rpmB"
                     /locus_tag="ACJJD2_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HGG7580178.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(5042..6568)
                     /gene="farB"
                     /locus_tag="ACJJD2_001683"
     CDS             complement(5042..6568)
                     /gene="farB"
                     /locus_tag="ACJJD2_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HGG7580179.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHSSGGGGH
                     "
     gene            complement(6592..7746)
                     /gene="farA"
                     /locus_tag="ACJJD2_001684"
     CDS             complement(6592..7746)
                     /gene="farA"
                     /locus_tag="ACJJD2_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HGG7580180.1"
                     /translation="MDTHADETKLQNTQAKRKRRLTALTLLFALAAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRTQIRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT         2125 a         2181 c         1849 g         1753 t
ORIGIN      
        1 cataaaacaa cagatttcca agccggaaca tcttttacgg agcctgaaaa tcatttcatg
       61 attctaccgt cctaaaggtc ggtttttcaa gcaggaagaa aaagttttca gatggcaaaa
      121 aagccctcca acactgaaag gccttatatc ggaaacttcc cgcaacacgg gaaacagaca
      181 aatgcaaatc gtcaaacctc gccaacagga atcgaacctg tattttacgc ttaggaggca
      241 tacgttctat ccgttgaact atggcgagcc gaaatgaaaa ggagatttta accctttccg
      301 acgacaaaag acaagatgcc ggccgcaatc agcggcccga cagggatacc gcccataaat
      361 gccaccccga taaccgtccc gattaacagc cctgtaatta aaacaggctg ctgtcccatc
      421 aaaggcacgc cgcgtcccgc cagccaagcc acgaaaatac cgataaaaac ggcggatatc
      481 attttaaaat tcaaaaattc ggcaacggga ggaacctgcg cctttcctga aaccaacgga
      541 ctcaaaaccc ctatggtcaa aagaatgata ccgagattca acccatgctt ctcgaccaac
      601 gggacaaact gtaccaatgc cgtctgctgc atcagcagca atatggttgc cgagatggta
      661 atcgaattgt tgttgctgac cacccccaac agaatcagcg taaccagaaa caggggaaca
      721 aaactgaaat tcatcgcctc aagacaccct gaccaaagat tccttcgcca gctgaatcat
      781 ggcatccttc acttcgctgt cgggcagggc atccaaggcg gtaacggcac aatcgactgc
      841 tttgcgcgcc tcgcctatcg aatatgccaa agcatccgaa cggacgacat aatcgtggat
      901 tttctcaaaa tagctgcgat ctgcattttc caaagcagta cgcacatcgt tcgcaacctg
      961 ttcggaaccc tgacgcatca gataaatcaa aggcaaagtc ggttttcctt ccgccaaatc
     1021 gtcgccgacg tttttgccgg tttcttcggt ttcgccagaa tagtccagca catcgtcaat
     1081 aatttggaat gccgtaccga catacatacc gtagtctttc aacgcctgtt cgtgttcggg
     1141 ggaagccttg cccaaaattg cgccgacttg agcggcagct tcaaacaatt ttgccgtttt
     1201 atattggatg acttggatat attgttcttc ggtaatgtcc gtattgccga tgttcatcag
     1261 ctgcatgact tcgccctcgg caataatgtt ggttgcatcc gccatcactt ccaaaacgcg
     1321 catactgccc gaggcaacca tcagttgaaa ggcgcgcgtg tataaaaagt cgccaaccaa
     1381 cacagccgcc gcattgccga acagattgtt tgccgttgcc cgcccacggc gcaaatcgct
     1441 ttcatcgacg acatcgtcgt gcaggagggt ggaagtgtgg ataaactcga ccatcgccgc
     1501 cagcgaatac agtttctcgt catcataacc gacagcctta cccgccaaaa tcgtcataat
     1561 cggacgcagg cgtttgccgc ccgcgctgat gatatatgta ccgatttgcg aaatcagtgc
     1621 gacatcggat tgcaccgcac ggttgatgac ttcattgact ttggcaaggt cttcaggcag
     1681 atgtcgctgg aaatagggca gattctcgag catggcagac tctcaggttt acgtttccgt
     1741 caaacggcag ataccgcttg aaagctgatt caaatagcgg gcaattatat cagcaaagcc
     1801 atcagggtac atcttttcag acggcatatg gttatccgaa ccgcgcaaac tttgacaaaa
     1861 caggcaaata acaatacaat gccgagttcc gcacaatggt gtgcggatat taaccataac
     1921 ccttatggag ttgagtatgt acgcggtcgt aaaaaccggc ggcaaacagt ataaagtttc
     1981 cgtcggcgaa aaattgaaag tagaacagat accagccgaa ctcgacagcc aaatcgaact
     2041 gaccgaagtt ttgatgattg ctgacggcga atctgtaaaa gttggcgcac cctttatcga
     2101 aggtgcaaaa gtaacggcta aagtagtggc acacggtcgt ggcgaaaaag tccgcatctt
     2161 caaaatgcgc cgccgcaaac actaccaaaa acgccaaggc caccgccaaa atttcaccca
     2221 aatcgaaatc gtggcaatcg cctaacctta aaacttagga gcattacaaa tggcaagtaa
     2281 aaaagcaggc ggcagcaccc gcaacggtcg cgattcagaa gccaaacgct tgggcgttaa
     2341 agcctacggc aacgagctga ttcccgcagg ttccatcatc gtacgccaac gcggtaccaa
     2401 attccacgca ggcgacaacg taggcatggg caaagaccac actttgttcg ccaaagttga
     2461 cggttatgtc gaattcaaaa ccaaaggcgc gctgaaccgt aaaactgtca gcatccgtcc
     2521 ttacaccggt tctgaagaat aatccaaccg atacctgaag ccgcatcttt tcacgatgcg
     2581 gctttttata gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaaa
     2641 tagtacggaa ccgattcact tggtgcttca gcaccttaga gaatcgttct ctttgagcta
     2701 aggcgaggca acgccgtact ggtttaaatt taatccacta tacatacccc acacccgatt
     2761 tgatacacat taagctgaaa gtaaaaatcc gcatacaccc tcccctgcat atttcttcaa
     2821 cagtgggttt tgatataatc gcctatctgt tacagatagt tcaaacggca ttcaaaccct
     2881 tacaaatacc gtctgaaatc atcggcatcc gtctatgcaa aggatatttt atgagtttac
     2941 acagcgacat cctcgtcgtc ggcgcaggcc cggcgggttt aagttttgca gccgaacttg
     3001 ccggcagcgg tttgaaagtt accctgatcg aacgcagccc actgactgtt ctgcaaaatc
     3061 ctccatatga cggacgcgaa atcgccctga cccatttttc ccgcgaaatc atgcagcgtt
     3121 tgggtatgtg ggacaaaatt cccgaaaacg aaatctaccc tttgcgcgat gccaaagtgc
     3181 tgaacggacg ttccgactac cagctccact ttccccaacc gactgaagcg cgcggcgaac
     3241 ctgccgactg tttgggctat ctgatttcca accacaatat ccgccgcgcc gcctatgaag
     3301 tcgtatcaca actcgacaat gtcagcattc tgaccgatac ggttgtcaaa gaagtcaaaa
     3361 catctgacaa cgaagcacaa gtcattttgg aaaacggcaa aatcctgact gcacgcctgc
     3421 ttttggcggc agacagccgc ttctcgcaaa cccgtcgaca actcggtatc tcctccgata
     3481 tgcacgatta cagccgaacc atgttcgtct gccgtatgaa acataccctt tccaaccaac
     3541 ataccgctta cgaatgcttc cattacggac gcaccatcgc actgctgccg ctggaagagc
     3601 acctgaccaa taccgtcatt accgtcgata ccgataaaat caacagcgtt caaaaccttt
     3661 cgcccgaaga attggccgca agcgtaaaag aacagctcaa ggccaggctc ggcgatatgg
     3721 aactggtcag cagcatccac cattaccccc ttgtcggtat gattgccaaa cgtttctacg
     3781 gcaaacgcag cgcgctgatc ggcgatgcgg ctgtcggtat gcaccccgtt accgcacacg
     3841 gtttcaactt gggtctgtcc agcgcagata ttttggcaaa actgatactc gaagccgagc
     3901 agcgcggtca ggacatcggc gcggcttcct tgttggaaaa atacagcagc aaacatatgc
     3961 tgcacgccca tccgctttat cacgggacca atatgatgct gaagctgttt accaacgaaa
     4021 ccgcgccggc aaaactgctg cgcggcttgg tattgcgtgc cggcaacaat ttcccgccgc
     4081 tgaaaaagct gattaccaaa caactgaccg gttgaaaact gccgaaatgc cgtctgaaac
     4141 gtttcagacg gcatttttgt attatagtgg attaacaaaa atcaggacaa ggcgacgaag
     4201 ccgcagacag tacaaataca cttggtgctt cagcacctta gagaatcgtt ctctatcctt
     4261 ggcagacggt ttgcagcaga ttcgcatacg gcagatgttt caagcggaaa agaaacacga
     4321 taaaaataaa aaagcctccg aacagtcgga ggctttgctt tcaaactgaa attatttcag
     4381 tttggtttct ttgtacacta cgtgtttgcg ggcaaccgga tcgaattttt taatttccag
     4441 tttgccgggc atagtgcgtt tgtttttggt agtggtgtag aagtgaccag tacctgcact
     4501 ggattccagt ttgattttat cgcgcattgc agtaatcctt aattaaatag tgtttaaatt
     4561 aagcttcgcc gcgagcacgc aaatcagcca atacgacatc aatgcctact ttgtcgatgg
     4621 tacgcagagc ggcgttagaa acgcgcaggc gaacccagcg gttttcactt tctacccaaa
     4681 aacgacgtga ttgcaagttg ggcaaaaaac ggcgtttggt tttgttgttg gcgtgcgata
     4741 cgttgttgcc ggacatcggg cgtttgccgg tcactttgca aactcgtgcc ataatcagtc
     4801 tccaaacttc taaaatagta aaacgcgatt tataccacga aaaacagtgt tagttcaagt
     4861 gttttaaaga aaaacggctg ttttgcgcgg ataatccttc cgattgtcgc atctgtggaa
     4921 cgtttgcagg tgcgaaacag atggggcgcg attatagcgg atttcgggaa ctgctgcatt
     4981 caaaatgccg tccgaacata tttccagtat tttcagacgg catttcaagt tttcaaatcc
     5041 ctcaatgtcc accgccgcca ctgctgtgga acggcggttt tgccagccat atgacgggta
     5101 tcatgataat gaataacaag ctgcctgcca taaagatttc attcgatccg atgatgaagc
     5161 cctgctgggt aatggtattg ttgatgatac ctagggtttg aatgtcggaa atgccttgtt
     5221 gggacaaatg cgccgccgtt tcgtgcaatg ttgcggaata gggcgtgatg tgttcggcaa
     5281 agcgcgtgtg gtgcaacgct tcgcgccgtt cccacagggt gctgacgacg gatacgccga
     5341 caccgcccat cagcacgcgc aggaaattcg acaggctgcc ggcggcggca atctgcccgc
     5401 ccttcatgtg cgacagtgtg atggtggtca gcggcaggaa gaacatggca acgcctgccc
     5461 cctgccaaaa ctgcggccag atgacgttgc cgatatccat gtcggcataa aaatcggtgc
     5521 gccaatagaa agtaaaggca aaggtcagga agctggcggt tacgagcagg cgcatatcga
     5581 ttttattgcc gaacctgccg attaacggag acaggaagac gggcaggatg ccgacgggtg
     5641 cggcggcaag ccccgcccac gtggaggtat agcccaggtt ggtctgcaac actaacggca
     5701 gcaaggtcag cgtccccata tacaccataa aacccaatga tgtggcaatt acgccgacgg
     5761 taaaattccg atctttaaac agcgataaat cgacaatcgg atatttttct cccaattccc
     5821 aaacaataaa atacgacaaa cacaccagtg cgactacgcc caaggtaatg atttctccag
     5881 aggcgaacca gtcgagttcc ttacccctgt ccagcatcat ctgtaacgcg ccgataccga
     5941 ctaccatcaa tgtaagcccg acatagtcgg tcggcatttt aacggtttcc gtttcccgat
     6001 atttcaaatg tttccatgta atccatgccg atatgatacc gatagggata ttaatgaaga
     6061 aaatccaacc ccaatgccag tttccggaaa tccaaccgcc gagtatcggc ccgagaacag
     6121 gggcgacaac gacggtcatt gcccacaatg ccagtgccag cgtccgtttt gcgggcggat
     6181 aggatgccat taacaggctt tgcgacaggg gaatcagcgg cccggcgata aagccctgca
     6241 agatgcggaa aacaaccagc gactgaaggt tgggggcaat accgcacagc cacgatgtga
     6301 tgacgaaacc gacagcggcg gcggtaaaca atttgacctc gccgatacgt tttgccaaaa
     6361 agcccgttaa cggcacggaa acggcgtttg ccacagcaaa agaagtaatg acccacgtcc
     6421 cctgcgtggt tgccgcaccg aggttgccgg cgatgacggg aacggcgaca ttggcgatag
     6481 tcgtatctaa aacttccata aatacggcaa gccccaaaga cagcgtaacc cacgccaatg
     6541 ccgcaccctt aagcggtgga taatccattg tgtcctccgt ttcagacggc atcagggcgc
     6601 ggattgcccg aggatttcat cgaccgtccg atcgacttcc gaccagtcgg tactttccat
     6661 ttccggcaat gccgcacccg gcgtttttga aacaggcgcg cctgcggcgg aagtatccac
     6721 tttaaccgtc atcgacaaac cgatacgcaa cggatgcctg tccacatctt cgcggttcag
     6781 cacgatacgg acggggacgc gctgcaccac tttaatccag ttgcccgttg cgttttgcgc
     6841 cggaatcagc gaaaacgcgc tgcccgtacc tgccgaaaaa cctgccaccc tgccgcgata
     6901 aacaatttgt ttgccgtaca aatcggacac cagctcggca ggctgtccga ttttcatatg
     6961 ccgcaactgc gtctctttaa aattagcatc cacccacaca tccgacagcg gcaccaccgc
     7021 catcagcggc gcgcctgccg ccacctgctg cccgacctgc accgaacgct tcgccacctg
     7081 accgtccgcc ggcgcgcgga tttgcgtccg ctgaaggttc aaccacgcat ctttcaacct
     7141 gccgattgcc gtctgaaccg ccggctgttc gcgcaaagaa acctgaccgc ccaaagccgc
     7201 acgtgccgaa gactcttccg ccaaagccgc cttaactgcc gcctgagcct gagacactgc
     7261 cgcacgggca tgtgccagct cttcggcgga caccgcgccc gattccgcta aagcagaccg
     7321 gcggcgtaaa tcatcctgcg cacgtgccaa atccgctcgg cgcaaggcaa cctgcgcccc
     7381 cgcctgcgaa gtggcggcat tttgccggcg gttttgccgc accgcctgaa tcagctcgtt
     7441 ttttgcccgc tcgtaagcca gcacatcatt atcgtcgtcc aataccgcca gcacgtcgcc
     7501 ttttttcacg gcatccgtat cgtcgtgcaa aaccttccgc accgtaccgc ccttttgcgg
     7561 cgtaacctga accacgcgtc cggcaacata agcgtcttcc gtttcctctt cgtgctgcca
     7621 ccataaaaaa aacgccgacc cggcggctgc ggcggcaagc gcgaacagca gcgtcaatgc
     7681 cgtcaggcgg cgtttgcgtt tggcttgcgt gttttgaagt tttgtttcgt ccgcgtgcgt
     7741 atccataaga ttgggttccg aatttcctga tttcatataa acaatgttct ttcaatagga
     7801 agcagattct atatccgcgc aataacgcaa tcaagtcagt attttagatg caatattcaa
     7861 aaaacaacgc ttcaggcggc aaaactgaaa atatatttcg tttatata
//
LOCUS       DBBZXW010000089         7692 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.089, whole genome shotgun sequence.
ACCESSION   DBBZXW010000089 DBBZXW010000000
VERSION     DBBZXW010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.089"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(1..3814)
                     /gene="hrpA"
                     /locus_tag="ACJJD2_001685"
                     /pseudo
     CDS             complement(1..3814)
                     /gene="hrpA"
                     /locus_tag="ACJJD2_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion exoprotein HrpA"
     gene            complement(3923..5602)
                     /gene="hrpB"
                     /locus_tag="ACJJD2_001686"
     CDS             complement(3923..5602)
                     /gene="hrpB"
                     /locus_tag="ACJJD2_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HGG7580181.1"
                     /translation="MEIINDAELIRSMQRQQHIDAELLTDANVRFEQPLEKNNYVLSE
                     DETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTGMCLGSNNLSRLQKAAQQILIV
                     RGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEKRDGKSAEGSISAFNNKFPLYR
                     NKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKSDLQIKWQQNKPIRFSIGIDDA
                     GGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHKTDLTDATGTETASGSRSYSVH
                     YSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQYQSSLAAERMLWRNRLHKTSVG
                     MKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYLNRWQLDGKLSYKRGTGMRQSM
                     PAPEENGGGTIPGTSRMKIITAGLDAAAPFMLGKQQFFYATAIQAQWNKTPLVAQDKL
                     SIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNHQFYLGADYGRVSGESAQYVSG
                     KQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQTTNTVYGFNLNYSF"
     gene            5549..6532
                     /gene="repM"
                     /locus_tag="ACJJD2_001687"
     CDS             5549..6532
                     /gene="repM"
                     /locus_tag="ACJJD2_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein RepM"
                     /protein_id="HGG7580182.1"
                     /translation="MLLTLHGTDKFCIVNNFHTNRNTAYKALKDTCNNLFERQFSFIE
                     KTPKGEKVVRTRWVSQVAYIEQQATVELVFAPNVAPLITMLEKNFTSYELDQVSSLSS
                     KYAVRLYEIIISWRAAGKTPMFSTMELRERLGMMPDEYQKMELFKRKVLDFAVKQIND
                     KTDISITYEQHKEGRKIVGFTFSILHKIGSKDIPLENQSELFAGMTDLEAGTIRVRAE
                     AYIASLIAKGQNVTKAHRLNILKKAVEERWGFEDVAKDNGAKNPENKNAKVVLNEWEK
                     ISNGTRFKDKDGTIWVKDSGMLRTEGTNRWIADSQIAKLFPMLTVMVEEGI"
     gene            6629..7045
                     /locus_tag="ACJJD2_001688"
                     /pseudo
     CDS             6629..7045
                     /locus_tag="ACJJD2_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
     gene            complement(7051..7149)
                     /locus_tag="ACJJD2_001689"
                     /pseudo
     CDS             complement(7051..7149)
                     /locus_tag="ACJJD2_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            7242..>7692
                     /locus_tag="ACJJD2_001690"
     CDS             7242..>7692
                     /locus_tag="ACJJD2_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR-type extended signal peptide-containing
                     protein"
                     /protein_id="HGG7580183.1"
                     /translation="MNRTLYKVVFNKHRNCMIVVAENAKREGKNTADTQAVGILPNDI
                     AGFAGFIHSISVISFSLSLLLGSALILTSSSANAQGIVADKSAPAQQQPTILQTGNGI
                     PQVNIQTPTSAGVSVNQYAQFDVGNRGAILNNSRSNTQTQLGGWIQGN"
BASE COUNT         1858 a         1761 c         1872 g         2201 t
ORIGIN      
        1 gctgcagttt gggcgacgac gcggacaggc aatttggttt cgttcagttc gtttttactg
       61 taattgctct tacctacctt gatgccgata aagcggcggc ttttttggac atccaactcg
      121 tgcttgtgga tgccttcttc tgccagcagt tgcagctctt cacccgcaac cagggtaact
      181 ttacctgcag gggcattgaa gcgggtggta ttagcttcga tgttgccgcc tgcctgaagc
      241 gtgataccgt tggcggtcag ctcgacgggg gctggcataa tcaggtggtc gcgggtgctg
      301 gtaaacttgg tttttctgat gattttgccg cttttacctt tggtttttaa gaaggtatag
      361 gcatcgtttt gtccagcctc cagtacaata tcactatggg ctttgatgtc tatgctgcct
      421 gagggagctt tgatttcgga tgcaccgata ataatacgtg catcatcgag tgccgcagct
      481 gcatgaatac ttacccccgt acgtccggtc aaacgtgaag gcttgttcag agcagctttg
      541 tcgtagtgac tcttgtaggt gggcttgcca atttcatatt ggtcggttat gccgtcaatc
      601 agaatagcag ccgcctctga atctgctgcc tttggcaata cgcctgcggc gtgaaggttc
      661 agttttttgg aagcggtaat atcggaaccg ctgatttcga tgccttgtgc ggaaatcaag
      721 tcaatatttt gtgcagaaag cttggcttgc agatattctt tgcctttggg ttttttacct
      781 ttaacttcct tgttgatggc ttgaatatag aaagcgagac ggtcgcgttc ttcttgcagg
      841 gttggaatca gcttgctttt aggcgagctt ttttcaactg cgcaatctgc tgttccaatt
      901 ctttggattt ttggttgagt tcagccgctt tttgtgtagg aaaataattg ctgaatgagt
      961 tgtttacggc ttcgatattc aacttgcctt tggtggtggc gacaaccaag tttttaccgg
     1021 ctgtaatttt agaacctctt aaatctgttt ctcctgtaac cagacggata ttgccttttg
     1081 cttccaatga ggaaacttga gcactaggcg cacctgcatt tcctcctttt acagacaaca
     1141 gcaattttcc gcctgttttg atgctcaggt cggtatgcgc actgatgcgg ttggcaggtt
     1201 cgatggttaa tgtgccgcta cctgcttcaa tattcagccg tccggccaat ggttttaatt
     1261 cggcattatc ttccaaagtt ttggtcgaaa cggtactcca attgatgttg ccgcgcttga
     1321 ctagggcggt accggcagta aggttgattg cacccgctct cagcgtggtg ttgtcggcaa
     1381 tttgggaata gcgcgcattg agtgccaata caccgttagc caccagcttg ttggcagaag
     1441 gcagtttgtc gttttgccaa atctggctgc cggtaatgct tagatgacgg tgtgcgtagg
     1501 catctacttg gttgagcgtt acccgctcgt gttgtgcatt aagatgcgta ttatgggtag
     1561 actccagctt ggtattttct atgctcaatg cccggtcgga atgaatgttc aatgccccgc
     1621 ttttggcatg gacgttaagg ttttttaagt cggcattacc accgttgttt ttgatgctga
     1681 tgtgttttcc gttgattgaa ttgcgttgtt ttccgtcacc aagctgaata ccgttgccgg
     1741 caaccaacgt aatatctcct gaagatgaag tgatattggt attgtctgct ttcagacggc
     1801 ctttaccaac cgatcctgca ttgacatcgg ccttggctgt cagggtattg tgaccggtaa
     1861 agtcggcatt accgttggcc aataaggata catgaccgtc tgcagaaaca gcatgaaggc
     1921 cgtctgaaac gatattgccc tgcaatgcgg tggtttcgag agccttggct gcgttcagct
     1981 tggtattgcg aagctgaata ttgcctttgg ctgcctgaat gtgcagatta cccgagttgg
     2041 tacgcagatt ggtattggta acattcagcg agcctgcctc cacacccatg tcttttgagg
     2101 cagtgagggt tttactggtg ccggtaatat gggcagcgtt atccgatttc aaatggatgc
     2161 tggcggcaga caaatcttta tcaacattca aattcagatc tttacctgta tgaacataca
     2221 gattgccggg agtattcaga ttggtagttt tggcagtaat gttatcgtct gccagtaaag
     2281 caagctgctt gccgcccttg atactgcctc cgtttaagcg gatatcggag gtaactgttg
     2341 aagcttccaa agaaagcggt ttgcctgctt cgatgtgtgc ggtgtctttg gcatctatta
     2401 cggcggaact gctgatggtg ccgttggata atacggtaac atctgccccg gtaatgcgtg
     2461 tgttattgcc taattcggcg ttgcctttgc tggaactgta tacggtagtg ccagtctgaa
     2521 tactggcctc cttgatgacg gtacggccgc cggtcgacag attggtcgaa cctttagcat
     2581 tgttcacatt tgctttgctt tcgataacca aattacggcc ggcatttaat accgtagcag
     2641 cagggcggtt gccgttgttt tgaacgaccg ctccgttacg caaaccgatg tcctccccgg
     2701 tatcaataac caataagcct ttgctctcga tccgaccatc attggagata aatgtgcctg
     2761 ccgctccttt ttcggtggtt tcgatggaga gataagtcgg tgaagcttcg gtgccgtcgg
     2821 cagtggtggc gatgcggccg ctgttttcaa tgcggcctga cgaagtcaca atcaattgct
     2881 tggccgcttc gagtgtgccg gcatttttga cgcctacgcc tttttcattg gcaatcagtg
     2941 tgatgctgtc ggcgtacata ccgcccagtg cggcagtatc aagggcaata gtcggtttcg
     3001 tacccgctgc cgtacctgca ctgatttcgc cgctggcgta atctactttc tgaggaccgg
     3061 tagaaaccgc caggttttta ccctgtaatt tcccctgcaa agcaactgca cgagcaagta
     3121 ccccggtgta gtcggcttcg cctttatcat tccaacctgc tgctcctacg gtcaatgtgc
     3181 cttgacgcac atcaaatcct gtcagtgcac cgtctttgcc gatttggggc gcaccggtag
     3241 ttaagatgcc ccgaccgaca tttttaaagc cgccgccatt aacggtaatg ccgttggggt
     3301 tggcaataat cacgtcggcc ttttgaccgc ctacggtaac gatgccgttg agtttgctag
     3361 ccgtaccgcg tacctcgttc aaaatcaatt gcgcactgcc tttgaccaca aacggattat
     3421 tgttacggtc gttgtttaac actgcccctt tgttgtcaac atcaaactgc gtatagcggt
     3481 tgtggctcaa tccgcgtcca ttcggagttt ggatattcac caagggggca ccagtgttgg
     3541 ttttaaggat aacgacctgc tggtttttag gtgctgattt gtcggtggta atttgggcat
     3601 gggcaggcaa taccatactc agggaaacca aagagcagac caaagtttta agggtggttt
     3661 tgagtttgcc gcaaaggtcg cctgaagttt tcagtgaaac agaaaccgaa ctgcctgcct
     3721 gtttaccttt gccctggctg ttggcagttt cggctactgc aaccatggtg ctgtgctttt
     3781 tactaaagat aatgcgatgt aaacctttat tcatgtctat tccattttga agatgaacgt
     3841 actgcgcgcc aagtacgtag gtaaagtttg acggtctgag gataaggaaa gaccgtctaa
     3901 atatcagtaa aaaattcaga ggttagaaac tgtaattcaa gttgaagccg taaacggtgt
     3961 tggtcgtctg aaagcctttg ggtttatgaa gcggcttgcc ggcaaacaga tcataagcaa
     4021 acataccgcc tactttatgc cctcctctga agccgaccac tgcacccatc agctgcttgc
     4081 ccgatacata ttgtgcactt tcgccagata cgcggccata gtccgcaccg agatagaact
     4141 gatggttcgg atgaaaatac caagttaaag tattctgcca gtagaaacct cgctctccga
     4201 aaagactctg ctccccatca aatccgcgaa cggtgtagcg gctgccgatt gacaatttat
     4261 cttgggcaac caacggcgtt ttgttccatt gagcttgaat ggcggttgcg tagaaaaact
     4321 gctgtttgcc caacataaac ggggccgctg catccaatcc ggcggttatg attttcatac
     4381 gggatgtgcc tggaatagta ccgccgccgt tttcttcagg tgcgggcata ctttggcgca
     4441 taccggtccc gcgtttgtaa gacaacttgc cgtcaagctg ccaacggttg aggtaagcac
     4501 ggtggcgcaa ttcggcttcc cagcctgcag agcggcggcg ttgcacttcg atttcggcat
     4561 cgtcgatgta tttataggtt tggcgtgtcc ataatttcat tccgactgaa gttttatgaa
     4621 gtctgttacg ccaaagcatg cgctcggcgg ccaagctgct ctgatattgt ttgccgttgt
     4681 aatcgtaatt gacggaatag ccttcggttg cttcgtggta acgatgtcca ttgtgattaa
     4741 aagaaaacag ccattttttt acgggcaccg aataatgcac gctgtaactt ctggatccgc
     4801 ttgcagtttc cgtaccggtg gcatcagtca agtccgtttt gtgcgccaaa ccgcgtccat
     4861 atgaaacata aaacaaatcg cttaagccca aagggttatc gaacgataaa gcgacatttc
     4921 cttgatattt gccggtcgtt ttgccgcccg catcatctat accgatactg aaccgtatgg
     4981 gtttattctg ctgccatttg atctgtaaat cgcttttgcc ttcttcttcg gacggtataa
     5041 tctgaatatc tgttttaaca ctcgacaaac gacgcaggtt ttccaagccc tgctctacat
     5101 cgcgaagatt gagaattttg ttcctatata agggaaattt gttattgaat gcactaatac
     5161 tgccttcggc agacttccca tcccgttttt cttcatagcg gatatcccct atttcgcctg
     5221 ctgatacccg taatttcaga attcccgaat ccatattctg tggttggata atagcttggg
     5281 aagtgaggta gccacgcaca atcagtatct gttgcgcggc tttttgtagc ctgctcaaat
     5341 tattggaacc taaacacatc ccagttttaa aagctgtttc tttcatgagc acagaaggaa
     5401 gaaaagaaaa tttgcgcgcc gtcttatcat ctaaactaat gtaatttacc cgagtacacg
     5461 gtgtttcatc ttcactcagg acataattgt tcttctccaa tggttgctcg aaacggacat
     5521 ttgcatcagt taacaattca gcatctatgt gctgctgacg ctgcatggaa cggataagtt
     5581 ctgcatcgtt aataatttcc ataccaaccg taatacggcg tataaggctt tgaaagatac
     5641 ctgtaacaac ctttttgaac gccaattcag ttttatcgaa aaaacaccaa aaggggaaaa
     5701 ggtagtacgg acaaggtggg tatctcaagt cgcctatatt gaacaacagg caacggtaga
     5761 gttagttttt gcaccaaatg ttgccccttt gattacgatg ctagaaaaaa acttcacaag
     5821 ctacgagctt gatcaggtct catcgttgag cagtaaatac gcggtgcggc tctacgaaat
     5881 tattatttca tggcgtgcag ccggtaagac accgatgttc agtacaatgg agttgcgcga
     5941 acgtttgggt atgatgcctg acgagtatca aaaaatggag ctattcaaac gtaaggtttt
     6001 ggatttcgcc gtcaagcaga tcaatgataa aacggatatt tccattacct acgagcagca
     6061 taaagaagga cgaaaaattg taggttttac attctcaatc ctacataaaa tagggtcgaa
     6121 agacatccct cttgaaaatc aatcggaact ttttgccgga atgactgatt tggaagccgg
     6181 aacgatacgg gtcagggcgg aagcatatat cgcttcgctc attgcaaaag gtcagaacgt
     6241 gactaaagcc cataggctga atattctgaa aaaagccgta gaggaacgtt ggggatttga
     6301 agatgtggct aaagataatg gggccaaaaa tcctgaaaac aaaaatgcaa aagtcgtttt
     6361 aaacgaatgg gaaaagattt ctaatggcac acgttttaag gacaaggatg gaacaatttg
     6421 ggttaaagat tcaggtatgc ttaggactga agggacaaac aggtggatag ccgattctca
     6481 gattgccaaa ttatttccta tgttaactgt gatggttgag gaaggtattt aacccggcaa
     6541 ctcgcgtatt ctacctgttt tgcggtacgg aaaccaattg aacctgcttt acgctacaat
     6601 agaagattgc aattttgtcg gatgtaccat gaacgattac acagccatgc cgtctgaaga
     6661 cggaggaatc ggctcattat cgcttccgcc gcactcaatg gaggcggaac aatccgtttt
     6721 gggcgggttg atgctggaaa atccggcttg ggacaggatt gccgatgtgg tttcgggaga
     6781 ggatttctac cgccacgaac accgcctgat tttccgatcc attgccaaac tgatcaatga
     6841 gagccgtcct gccgatgtca tcacggttca ggaagatttg cagcggaacg aagagctgga
     6901 agcggcgggg ggattcgaat atctgattac gctggcgcaa aatactccgt ctgccgccaa
     6961 catccggcgc catgccgaaa tcgtgcgcga gcgttccatt atgcgccaac tcgccgaagt
     7021 gggaacggaa attgcccgca gcgccatacc caaaatatcg gcagcggaac gggcggtagc
     7081 ttggagtacg aaaaattcaa gcagtttctt ttgaactcta ttgtttaatt tacaattggt
     7141 tatctttatt ttcgtagcct ggcataactg ttaatctacg tcagccccta aaaattaatc
     7201 taatttacga ttataaaaat attattaaga aagcccttac tatgaaccgc accctgtaca
     7261 aagttgtatt taacaaacat cgaaactgca tgatagtcgt tgctgaaaat gccaaacgcg
     7321 agggcaaaaa cacagccgac acccaagctg taggtatttt gccaaatgat attgcgggct
     7381 ttgcgggttt tatccattct atctctgtta tctcattctc cctttcatta ctgctcggtt
     7441 ctgcccttat cctgacttct tcttctgcta atgcccaagg tatcgttgcc gacaaatccg
     7501 cacctgcaca gcaacagcct accatcctgc aaacaggtaa cggcataccg caagtcaata
     7561 ttcaaacccc tacttcggca ggggtttctg ttaatcaata cgcccagttt gatgtgggta
     7621 atcgcggggc gattttaaac aacagtcgca gcaacaccca aacacagcta ggcggttgga
     7681 ttcaaggcaa tc
//
LOCUS       DBBZXW010000090         7509 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.090, whole genome shotgun sequence.
ACCESSION   DBBZXW010000090 DBBZXW010000000
VERSION     DBBZXW010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7509
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.090"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..325
                     /locus_tag="ACJJD2_001691"
     CDS             <1..325
                     /locus_tag="ACJJD2_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HGG7580184.1"
                     /translation="EEGIAQTVVKGKTTRAEVEARFGKRNPFGCYAYHEVSLPIYNFL
                     PTNFIYMKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVIRKEAGKSL
                     SQPEK"
     gene            389..1672
                     /gene="hemL"
                     /locus_tag="ACJJD2_001692"
     CDS             389..1672
                     /gene="hemL"
                     /locus_tag="ACJJD2_001692"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HGG7580185.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPTEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGIMPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FQTAADAAGIEFAADSVGGMFGLYFAAHAPRNYADMARSNIDAFKRFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1888..2160)
                     /locus_tag="ACJJD2_001693"
     CDS             complement(1888..2160)
                     /locus_tag="ACJJD2_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HGG7580186.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2171..2734)
                     /gene="orn"
                     /locus_tag="ACJJD2_001694"
     CDS             complement(2171..2734)
                     /gene="orn"
                     /locus_tag="ACJJD2_001694"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HGG7580187.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2752..3639)
                     /gene="prmA"
                     /locus_tag="ACJJD2_001695"
     CDS             complement(2752..3639)
                     /gene="prmA"
                     /locus_tag="ACJJD2_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HGG7580188.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGETLEDQDWVR
                     LTQAQFDPIQISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            complement(3757..5118)
                     /gene="accC"
                     /locus_tag="ACJJD2_001696"
     CDS             complement(3757..5118)
                     /gene="accC"
                     /locus_tag="ACJJD2_001696"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HGG7580189.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5232..5687)
                     /gene="accB"
                     /locus_tag="ACJJD2_001697"
     CDS             complement(5232..5687)
                     /gene="accB"
                     /locus_tag="ACJJD2_001697"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HGG7580190.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5669..5926)
                     /locus_tag="ACJJD2_001698"
     CDS             complement(5669..5926)
                     /locus_tag="ACJJD2_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HGG7580191.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6043..7083
                     /gene="queA"
                     /locus_tag="ACJJD2_001699"
     CDS             6043..7083
                     /gene="queA"
                     /locus_tag="ACJJD2_001699"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HGG7580192.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
BASE COUNT         1557 a         1898 c         2233 g         1821 t
ORIGIN      
        1 ggaagaggga atcgcacaaa cggttgttaa aggcaaaacg actcgggcgg aggtagaggc
       61 acgtttcggg aagcgcaacc ctttcggttg ttatgcctat catgaagtca gcctgccgat
      121 ttataatttt ttgccgacca atttcattta tatgaaatca gaacgccggc attgggagtg
      181 gtgtgtggat tacgactggg aaggagttgt ccgggactac cgctttacac ataaagtgga
      241 aaaagacgag cgttccgtca tccgggatgc ggttggcgtc atccgcaaag aagcaggcaa
      301 atccttgtcg caacctgaaa aatgataaaa tgggactttc tgcttctaag cccgaaacct
      361 gccgttcaga cggcatttga ggataaatat gaaccgtaac gaaattttat tcgaccgcgc
      421 caaagccatc atccccggcg gcgtgaattc ccccgtccgc gcattcggca gcgtcggcgg
      481 cgtgccgcgc ttcatcaaaa aagccgaagg cgcgtatgtt tgggacgaaa acggcacgcg
      541 ttataccgac tatgtcggct cttgggggcc tgcgattgtc ggacacgcgc accccgaagt
      601 cgtcgaagcc gtgcgcgaag ccgcgttggg cggtttgtcg ttcggcgcgc ccaccgaggg
      661 cgaaatcgcc attgccgaac aaatcgccaa aatcatgccg tccgtcgaac ggctgcgcct
      721 cgtcagctcc ggtaccgaag cgacgatgac cgccatccgt ttggcacgcg gttttaccgg
      781 tcgcgacaaa atcatcaagt ttgaaggctg ctaccacggg cattccgaca gcctgctggt
      841 gaaagccggc agcggcctgc tgacgttcgg taatccctct tccgccggtg tgcctgccga
      901 ctttaccaaa cacactttag tccttgagta caacaacatc gcccaattgg aagaagcctt
      961 tgctcaaagc ggcaatgaca ttgcctgtgt gattttggag ccttttgtcg gcaatatgaa
     1021 ccttgtccgc ccgaccgaag ccttcgtcaa agccctgcgc gaattgaccg aaaaacacgg
     1081 cgcggtgttg atttacgacg aagtgatgac cggtttccgc gtcgcgctcg gcggcgcaca
     1141 atcgctgcac ggcatcatgc ccgacctgac cacgatgggc aaagtcatcg gcggcggtat
     1201 gccgcttgcc gcgttcggcg ggcgcaaaga cattatggaa tgtatttccc cactgggcgg
     1261 cgtgtatcag gcaggtacat tatcaggcaa cccgattgcc gtcgccgccg gtttgaaaac
     1321 gctggaaatc atccgccgcg aagggtttta tgaaaacctg acggcgcgta ccgaacagtt
     1381 ggttcaaggt tttcagacgg cagcggatgc ggcgggcatc gagtttgccg ccgacagcgt
     1441 gggcggtatg ttcggtctgt atttcgccgc acacgcgccg cgaaactatg ccgatatggc
     1501 gcgttccaat attgacgctt tcaaacgctt cttccacggt atgctcgacc gcggcattgc
     1561 cttcggcccg tccgcttatg aagcaggttt cgtttctgcc gcgcatacgc ccgagctgat
     1621 tgacgaaacg gttgcggttg cggttgaagt gttcaaggcg atggctgcat gatgttttga
     1681 cggacagagt ttctctgttc gatttgtttg gcagattgaa gtaagaatgc acaccgccgt
     1741 cattcccgcg caggcgggaa tccagacctt tcagtttctg taatgattga aaataacggg
     1801 ccgaaatcag ccgcgcccgg caggaagccg ccgccacctg aaacaatgcc gtctgaagcc
     1861 ttcagacggc attttatcgg aagcgcatca gaaaaaacgg atagcgacat atgcggtaaa
     1921 agcaagggca attacataga taaacccctt tataaattca aaagtctcat ctatatcgct
     1981 atatttttct ttcagttcgt cagattttcg ataacgtttc attttcaaga ccacttcatg
     2041 accaacaagc ccgaccttcc ggattcccgc ctgcgcggga atgacgggcg tgtatatttt
     2101 tgatttcaat ctgctgtaaa aatgccgtct gaaatgcagg atttgcgctt cagacggcat
     2161 tttttgtttc ttattgcgct tcggctctcg gggcggaaat cagaaagtgt tcgcggtagt
     2221 ggcgcatttc ttcgatgctc tccaaaatgt cgtccaatgc cttgtgcgaa ccgcgtttga
     2281 cgacgctttt ggcaacgggc ggattccagc gtttggcaag ctctttcagt gtggaaacgt
     2341 caaggttgcg gtagtggaag tagttttcca gtttcggcat atatttgacc ataaaacgcc
     2401 ggtcttggtg gatggaattg ccgcacatcg gcgtggcgcg tccgggtacc cattccgaca
     2461 taaagtccag cagtttctgt tcgacttcgg cttcggtatg cgacgattcg cgcacgcgct
     2521 gcgtcagccc cgtcctgccg tgtgtggcgg tgttccactc gtccatattg tcgagcagct
     2581 cgtcgctttg gtggacggcg taaacttcgg attgcgccaa tacattcaaa tccgagtcgg
     2641 taataatcat cgcgacttcg ataatgcggt cggtttcggg attcagcccc gtcatttcca
     2701 tatcgagcca gcagaggttg tttttgtcct gcacggtgtt tccttttcgt ttcagcgttt
     2761 tacgccgctc aagcgcgccc agccttcttc ggtttccgcc gggtcgaggt cgaaccattg
     2821 gctgtaaatg ccgccgagtt cttcggcctg ttcgtccaac aaaccggaca acacgatgcg
     2881 tccgccctgt ttggtgcggg ctgcgagcat ttcgccgagc atacgcaaag ggttggcgag
     2941 gatgttggcg acaactacgt cgaattgccc ttgaggcaga ccgtcgggca ggaagaattg
     3001 tgcatcgacg ttgttttgcg cggcgttgtc cctgccggcg cggacggcct gttcgtcaat
     3061 atccacgccg acggcggaac ctgcaccgag tttgagggcg gcgatggtca ggatgcccga
     3121 accgcagccg tagtcgagga cgctttcgcc gtttttgagt tgcgtatcca gccatttgag
     3181 gcagaggcgc gtggtcgggt ggctgccggt gccgaaggcg aggccgggat cgaggcggag
     3241 gttgacggca gtgccttcgg gggcttcgtg ccaagagggg gtaatccaca ggcgttcgga
     3301 aatttggatg gggtcgaatt gcgcttgggt caggcgtacc cagtcttggt cttcaagggt
     3361 ttcgccggtg tatgccaagt cttttaatcc gcattcttgt gcggcggttt ggatgatggc
     3421 ggcggcttcg tcgtgttcgc cgaacagggc gatgactttg ctctgctgcc agatttgttc
     3481 ggcgggcata ccgggttcgc cgaaaatcgc ctgttcgttt tgcgtgccgg cgtaggcatc
     3541 ttcgatggcg gcggagagtg cgccgtgttc catcagcgcg tcggcgaggc gttcggcgac
     3601 ggcatcgttg acgttgacgg tgatttgttg gtagggcata acgggctttc ttaacagacc
     3661 ttcggaatag ggtcgtactg tataagggga tgggtgtgta acggaaatgc cgtctgaaaa
     3721 cggacaaact gtttcagacg gcatatcggc ggcggtttac ttgtcctgtt tggctttgcg
     3781 atcttccagc cagtgttcca aatagtggat gctgacaccg cctttttgga aacccgcatc
     3841 ggcgaacagg tcgcggtgaa gcggcgtatt ggttttgatg ccggttaccg ccagctcggc
     3901 gagtgcgacg cgcattttcg ccattgcctg ttcacgcgtt ttgccgtgta cgcagatttt
     3961 gccgatcagg ctgtcgtagt acggtgggat gcggtagcct tggtaaatgt ggctgtccac
     4021 gcggataccg aagccgccgg gcaggtggca gctttcaatc gggcccgggc tggggatgaa
     4081 gttgtatggg tcttcggcgt tgatacggca ctcaaacgcg tggccttcga cttgaatatc
     4141 cttttgtttg tattgcaaag gcaggccggc ggcgatgcgg agttgctcct gcacgatgtc
     4201 cacgccggtg atgagctcgg taaccggatg ctcgacctga acgcgcgtgt tcatctcgat
     4261 aaagaaaaat tcgccgtctt cgtataaaaa ctcaaacgta cccgcgcccc ggtagccgat
     4321 gcgtttgcag gcatcggcac aggcgttgcc gattttggcg cgttcttttt cagtgatgaa
     4381 cggagccggt gcttcctcga tgactttttg gtggcggcgt tgcagcgaac agtcgcgctc
     4441 ggcaaggtag atggcgttgc cgtgttcgtc ggcaatcact tggatttcga cgtggcgcgg
     4501 acgttgcaaa tagcgttcca tgtaaaccat cgggttgccg aatgccgcgc ccgcttcggc
     4561 cttggtcatt tcgacagatt ggaggaggtc ttcttttttc tcgaccacgc gcataccgcg
     4621 accgccgccg ccaccggagg ctttgataat gacgggataa ccgactttat cggcgatttt
     4681 gaggatttct tcgccgtcgt cgggcaatgc gccgtcagaa ccggggacgc agggtacgcc
     4741 tgccgctatc atcgcgtgtt tggcggagac tttgtcgccc atcaggcgga tggtgtcggg
     4801 tttcgggccg ataaaggtaa agccggactg ctcgacctgt tcggcgaaat cggcgttttc
     4861 ggcaaggaaa ccgtagcccg gatggacagc gtccgcgcag cttacttcgg cggcggcgat
     4921 aatggcgggg acgttaaggt agctttgcgc ggaagcggca gggccgatgc acacggattc
     4981 gtcggcgagt ttgacgtgca ggctgtcttt gtcggcctcg gaatgcacgg cgacggtggc
     5041 aatgcccatt tcgcggcagg cacggagtac gcgtaatgcg atttcgcctc ggttggcgat
     5101 taaaactttt ttcagcatga tgactgttcc tgtggttccg gcaacccgtc cgtaaaaaaa
     5161 aaggtgcggg aacgccgaag ggggaaagca tttcagacgg catcggaagt ttatgccgtc
     5221 tgaaaacagg attatccgat gatgaagagc ggttcgccga attcgacggg cgtaccgttt
     5281 tcgaccagaa tttctttgac cgtgccggat ttttcggctt cgatttcgtt catcagcttc
     5341 atcgcttcga tgatgcacag cgtgtcgccg gctttaacct gttggccgac ttcgacaaaa
     5401 ggcgcggcat tcgggccggg tgcgcggtag aacgtgccga ccataggcga tttttgcgcg
     5461 tcggacaaat cgcgggcggc aggtgcggcg gcgggcgcgg atgccgcaac gggtgcggcg
     5521 gcaggcgtta cggccggcgc ggcggcaggt acgggcgcgg cgtaaacggg tgcggcggcg
     5581 atggttcggg tgatgcggac tttttcctcg ccttcggtta cttcgatttc ggcgataccc
     5641 gattcttcaa ccaaatcaat cagttttttt aatttgcgca aatccatttc tgttccttta
     5701 aaggctgccg gtgttccggc gggttgttgc gttggttttt cagaaaacag ccggcttgcg
     5761 gcaacggcgc aaaccgggcg gaatggtgtt cggatacggt tttcctgtgg tggaaaacaa
     5821 ccgtgagaat gtgtttattt tcccgaagtt gtcggtaaat gtccagtaaa atatcaaaaa
     5881 acggcggttt ttgggggaaa tgtgcaggaa gtttgatttt gcgcacaaga tgttccaggt
     5941 taagagtgtt tattctaatc tgttggtttt tcggacaaag atgccgtctg aaaaagggct
     6001 aaagtgcgta taatggcggc ttgcccgaac gagagtgtaa aaatggatat ttcagatttt
     6061 gattttaccc tgcccgaaaa gctgattgcc cagcatccgc ccgaagtgcg cggcagcagc
     6121 cgccttttgg ttgcgttgcc cgatatgccg ctgcaagacc gggtgttcgg cgatttgccg
     6181 gattatgtcg aggcgggcga cgttttggtg ttcaacaaca ccaaagtcat gaaggcgcgg
     6241 ctgtttgggc agaaagacag cggcggcagg atcgaagccc tgattgagcg cgtgttggac
     6301 aaccataccg cactggcgca catccgttcg tccaagtccc ccaagcccgg tatggggctg
     6361 gtgtttgaag gcggcatccg tgccgtgatg gtcgggcgtg agggcgaact gttctgcctg
     6421 cgttttgaag gcggtcaaac cgtttacgaa cttttggaac agaacggaca cctgcccctg
     6481 ccgccttata tcgaacgcgc cgccgacgcg gacgacgaca gccgttatca aaccgtttat
     6541 gccaaatatc agggtgcggt cgccgcgccg acggcgggtc tgcattttac ggaagaactt
     6601 ttgcgccgcc tgaaagacaa aggcgcagta accgcagaag taaccctgca cgtcggtgcg
     6661 ggaacgttcc agcccgtgcg tgtggaaaaa atcgaagaac acaaaatgca cagcgaatgg
     6721 tttgaagtgc cgtctgaaac cgccgccgcc gttgaggcgg caaaagcacg ggggaacaaa
     6781 gtctgggcgg tcggcacgac ttccatgcgc gccctcgaat ctgccgcgcg tgcgacgggt
     6841 cgtctgaaag cggggcaggg cgacaccgat attttcatca cgccgggcta ccgttttaat
     6901 gttgtcgaca ggctggttac caattttcat ttgccgaaat cgacgctgct gatgcttgtc
     6961 agcgcgtttt cgggtatggg tcatatccgc gccgcgtatc gttatgcggt cgaacgcgaa
     7021 taccgtttct tcagctacgg cgatgcgatg gttttggggc ggaacgaagg ggtggtacgt
     7081 tagaacagcc ccaagtctat tgggggaaga caagtgccgt ctgaacggac gttcggacgg
     7141 cattcttttg ttgatttgaa tgaaaggaac tgtatgacat agattcaggc gcgagaggcg
     7201 agaaactcag tcattgttga tgacgcgcaa tacgttaaaa ttcattccgt tttggtcgta
     7261 taaacatatt acatacgcca tttttttgta ttcaaggctg cctgaaaaca gtgggcaaga
     7321 atatctaacc caacgaaaag ctgaaaaagc aacaaaaaat aatctgcacc ttagtcggtt
     7381 ggttagtcca accttagggg tgcagaccat tcaatctttc aggctgcctt tgtttgttta
     7441 taagataaat ttttagccga acactttttc caagtgtgcc tgataatctg ccaagtattt
     7501 ttccacttg
//
LOCUS       DBBZXW010000091         7432 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.091, whole genome shotgun sequence.
ACCESSION   DBBZXW010000091 DBBZXW010000000
VERSION     DBBZXW010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.091"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(358..2400)
                     /gene="recG"
                     /locus_tag="ACJJD2_001700"
     CDS             complement(358..2400)
                     /gene="recG"
                     /locus_tag="ACJJD2_001700"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HGG7580193.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAIGTHALFSDGVTFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRL
                     VNNVRRAEVEGFVLNTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(2486..2929)
                     /gene="secB"
                     /locus_tag="ACJJD2_001701"
     CDS             complement(2486..2929)
                     /gene="secB"
                     /locus_tag="ACJJD2_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HGG7580194.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(2950..3207)
                     /gene="grxC"
                     /locus_tag="ACJJD2_001702"
     CDS             complement(2950..3207)
                     /gene="grxC"
                     /locus_tag="ACJJD2_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HGG7580195.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHTAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            3421..4914
                     /gene="rng"
                     /locus_tag="ACJJD2_001703"
     CDS             3421..4914
                     /gene="rng"
                     /locus_tag="ACJJD2_001703"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HGG7580196.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(4949..6199)
                     /locus_tag="ACJJD2_001704"
     CDS             complement(4949..6199)
                     /locus_tag="ACJJD2_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7580197.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTERGRIAV
                     MQESEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(6212..6369)
                     /locus_tag="ACJJD2_001705"
                     /pseudo
     CDS             complement(6212..6369)
                     /locus_tag="ACJJD2_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003824008.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(6592..>7432)
                     /locus_tag="ACJJD2_001706"
     CDS             complement(6592..>7432)
                     /locus_tag="ACJJD2_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HGG7580198.1"
                     /translation="PTGRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKR
                     RIVRELGALPAVADLIKPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYV
                     FMLAATAALLLNYRSPQEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISK
                     DIVHILPDALLPYLHIAIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGY
                     AMLIGSIVGTFVTPLSPALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIV
                     PLP"
BASE COUNT         1711 a         2182 c         1951 g         1588 t
ORIGIN      
        1 tcccatcatt gccgtgaaaa caaaccaaaa acctaaaatc ccgtcattcc cgcaaaagcg
       61 ggaatctagt ttatccggct tcagcgattt ccgacacatt tccacacgct tcgattccgt
      121 catttctccg gtttcaatca tttccgataa caccgtggtt tttcatttct agattcccgc
      181 ctgcgcggga atgacggcgg agggcttgcc gttttcccga taagtctctg cggcttccca
      241 ttgccggatt tccgcccact tgggaataac gagatttaaa atcatgaaaa tgtgtcaaaa
      301 ataatgcaaa atcagattcc gttgcacttt tttccaatat ttccggcgac atttcgctca
      361 cacgcccaaa taaccttccc tgccggaaag ccatcgtgcc aaatgcgctt cgacgatttc
      421 ggggttttgt tcaatcagta tcggggcgat ttcgcgcgct tgttccaaaa ggtgtaagtc
      481 ttcttcgagc ttggcgaaac gcagcatagg cacgccgctt tgacgcgcgc cgagaaattc
      541 gccggggccg cggatgttga ggtcttggcg ggcgatttca aagccgtcgg tgtgttcgta
      601 gatgactttc agccgcgctt tggcgagttc gcccaagggt tcggcaaaca ggaggacgca
      661 cacgctttct gccgcgccgc gcccgacccg accgcgtaat tggtgcagct gcgccaagcc
      721 catgcgctcg gcgtgttcga tgaccatcag ggcggcattg ggcacatcta cgccgacttc
      781 gataacggtg gtggcgacca agacgttcag ctcccccgaa gaaaaccgtg ccatcacttc
      841 ggccttttcg gcggccttca tgcgcccgtg taccagtccg atattcagct cgggcaatgc
      901 cgtctgaagc cgggcgaggg tttcggcggc ggtttgcagt tgcagggttt cgctttcttc
      961 aatcaatggg cagacccaat acgcctgccg cccttttcgg caagtattga ggacgaagcc
     1021 ttcgacttcg gcgcggcgga cgttgttgac gaggcgcgtt ttaatcgggg tgcgcccggg
     1081 cggcagtttg tcgatgacgg acacgtccaa atcggcgaaa aaactcatcg caagcgtgcg
     1141 cgggatgggc gtggcggaca tcatcaactg atggacttcg cgccctttgt ttttaagggc
     1201 gaggcgttgg gcaacgccga aacggtgctg ttcgtccacg atggtcaggc ccaaattgtg
     1261 aaacgtcacg ccgtctgaaa acagggcgtg cgtgccgatg gcgattttga cgctgccgtc
     1321 ggcgagtttg gctttggctt cgtctttggc ttttttacgc aaactgccaa aaaggcggac
     1381 aacttcaatg cccaaaggtt cgagccattg tttaaattta ataaaatgtt gttcggcaag
     1441 gatttcagtg ggcgccatta cagccacctg cgcaccggat tcgatggcgg tcagcgcgga
     1501 caaggcggcg acaatggttt tgccgctgcc gacatcgccc tgcagcaggc ggtgcatcgg
     1561 gtaggtttgc gccatatcgc ggcagatttc ggaaacaact ttttcttgcg catcggtcag
     1621 ggcaaacggc agggcttggc gcagggcttg ggtcaatgtg ccgtcgccgc ccaatgccgc
     1681 cgccgtgccg ccgatacgct tctgtcgcgc caagcgcatc gaaagctgtt gcgccaaaag
     1741 ttcatcgaat ttgagccgtt gccatgcagg cagcgtgccg tctgaaagct gatgaatcgt
     1801 gaaactcggc ggcggcgaat gcaaaagacg caggctttcg gcgaggtgtg gcagcttcag
     1861 acggcacagc agggcatcgg gcagcgtgtc gtgcagcggc gtaacgtcca acgccgtctg
     1921 aataatacgg cgcaaagtgg gctggttcaa accgtttacg gtcgggtaaa ccggcgtgag
     1981 gctttccgcc aaaccgccgc cctcggcatc gcggattttg ggatgaatca tctcgtcgcc
     2041 gtaaaagccg tgtttgattt cgcccacggc gcggatgcgt ttgccgaccg ccgtctgttt
     2101 ctgatggctg gcgtaaaagt ggatgaagcg cagaaaaagg acgctgccgg aaccgtcggc
     2161 gatttggaca atcaactgct tgcgcggttt gaacgttact tcctgatgga taacctcgcc
     2221 ctcgacctgg cacggcacgc caatcggcgc gtccttaatc ggcataatgt gcgtctcgtc
     2281 ctcgtaacgc agcggcaggt gcaacaccaa atcccacgcg gtatggaggt tgagtttgtc
     2341 gagcttcttg gcggaaacat cggtgatttt gagctgtttc tgggtttcgg gcgacatcat
     2401 aggcagattc ctttgaacgc acctatttta tccgaaaaca aaaataccgt ctgaaacgga
     2461 ttcagacggc atcggcaggc aggaatcaag ccccggcggc ttcggcttcc tgctgttgtt
     2521 ggtaaatcgc ctcaaaatta atcggcgcga gcaggacggg cgggaagccg gcacgtgtta
     2581 ccgtaccgga aacggcttcg cgcgcgtaag ggaagaggat gttcggacac gccacgccca
     2641 gcagcagctg cacatcttct tcggggatgt tttccaaacg gaagatgcca ctttgggtta
     2701 cttcgttcaa aaacatcgtg cgctcgttat ccagcttggc ggtaacggtt acggtaacgt
     2761 ccacgttgta gtagccgtct tccagctttt ggctgccggt ggaaacgcgc atatccactt
     2821 caggctcgcc ctgttccaaa aagatttgcg gcgcgtgcgg cacttccaaa gacaagtctt
     2881 tgacatacag tcgctcgatg ctgaatacgg gttgcagttc ttcgctcatt ttgttttcct
     2941 agttgggggt taagggttca gcagtccgtc cagcccgcct tcctgctgga ggcggtagag
     3001 gtcggtaaat ccgccgacgt gcgtttcgcc gatgaaaatc tgcggcacgc tgcgctgtcc
     3061 cgaaagctgc tgcatttcgg caaaggcttc ggggcttgca tcgacacgga tttcgtcgat
     3121 atgtccgaca cctgccgtgt gcagcagcct tttcgccatc gcgcagtagg gacaaaacgg
     3181 acctgtgtac atggtaacgg tctgcatatt gggtttccga aagttttgca atgataatca
     3241 atataggggc atttcccctg tttggcaagt gcggaacaga tgcacgttca aacggcatgt
     3301 gcggaatgtg tcaaagtttc ttttttaaag tatgataggc attgtgaaaa atatttttgc
     3361 acccgcgctg cgcggcggaa cgggtgcaaa aatattttta ttacattttc aggaaaaacc
     3421 atgttgtcag gactccccat ccccaaagac atcgcgcgcc cgcccgaaac gatattggtc
     3481 aacatcacgc cgcaggaaac gcgcgtagcg gtgttggagg aaaacaatat ctgcgagctg
     3541 cacatcgagc gcaacagcga acacagcctg gtcggcaata tctatctggg cgtggtgcgc
     3601 cgcgtgctgc ccgggatgca gagcgcgttt atcgacatcg gcttggaacg cgcggcgttt
     3661 ttacacatcg tcgatgtcct cgaacaacgc cgcaaccccg aagaaaccca gcgcatcgaa
     3721 catatgctgt ttgaagggca gtctgttttg gtgcaggtca tcaaagaccc gatcaacacc
     3781 aaaggcgcgc ggctttccac ccaaatctcg ctggcggggc gtttcctcgt ccatcttccg
     3841 caagaagacc acatcggcgt gtcccaacgc atcgaagacg atgccgaacg cagcagcctg
     3901 cgcgaacgcc tcgacaagct cctgccggaa aatgcctgcc ggggctacat catccgcacc
     3961 aacgccgaaa acgccaccga cgaacagctc cagtccgaca tcgactacct gaccaaagtg
     4021 tgggaacaca tccaagaaca ggcgaaaatc cggccgccgg aaaccctgct ttatcaggat
     4081 ttgcccttga gtttgcgcgt attgcgcgat atggtcggct gcgacacgca aaaaatcctc
     4141 gtcgattcca ccgtaaacca cgggcgcatg acgcgttttg ccgaacaata cgtccacggc
     4201 gcattgggca ggatagaatt gttcaaaggc gaacgcccgc tgtttgaaac ccacaacgtc
     4261 gaacaggaaa tcagccgcgc cctgcaaccg cgcgtcaacc tcaacttcgg cagctacctg
     4321 attatcgaat ccaccgaagc catgaccacg atagacgtga acaccggcgg cttcgtcggc
     4381 gcacgcaact tcgacgaaac catcttccgc accaacctcg aagcctgcca caccatcgcc
     4441 cgcgaattga ggctacgcaa cctcggcggc atcatcatca tcgacttcat cgatatggcg
     4501 caggaaagcc accgcgaagc cgtgttgcag gagcttgcca aagccctcgc cttcgaccgt
     4561 acccgcgtta ccctgcacgg ttttaccagc ctggggctgg tcgagctgac gcgcaaacgc
     4621 tcgcgcgaaa acttaaacca agtcctctgc gaaccctgcc cttcctgcca aggcagaggc
     4681 cgtctgaaaa cgccgcaaac cgtgtgctac gaaatccagc gcgaaatcgt ccgcgaagcg
     4741 cgccgttacg atgccgaaag tttccgcatc ctcgccgccc ccaacgtcat cgatttgttt
     4801 ttggacgaag aatcgcaatc cttggcaatg ctgatagatt tcatcggcaa accgatttct
     4861 ctggcggtcg aaaccgctta cacgcaggaa caatacgata ttgtgctgat gtaaaaaatg
     4921 ccgtctgaag ccttcagacg gcatctgtct atttcagggt ttccttgtcc aacaaggcgc
     4981 gtatcagcag accgtgtccg aacctgcggc tgtcggtcag ttccaaatat ccgccgtatt
     5041 ttttggctag cgtgtcggca atcgacagcc ccagccccgt cccctgctgc tccgttccca
     5101 aaatacggta aaacggatcg aggacgcgga cgcgttcgga ttccggaatg ccgttcccgt
     5161 tatcttccac ccacacggca agatatttcc cttcgtctgt gaaacccaaa tctatcctgc
     5221 cttcggacgg ggtataacgt attgcgttat caacaaacgt tttaaccaag gtatagattt
     5281 cagtttcatc ggcaaatatt tcgacatcac ctccgaccgc cacaccaatg tcctgacgtt
     5341 tttccaaggc aagcggcatc agttcctgca acacttggcg gaaacggctt tgcagaccga
     5401 atgtcgtttt cgccaaaggg gtttcgtccg actgcgaacg cgccagtgcc aaaagctgct
     5461 cgagcaggtg tttgttgcgc cgtatgcttt gctgcaaaac ggcagactgc cgcgccgcat
     5521 cgggtggcag agacatattg ttgagccgtt ccgcctgaag ggaaagggct gtcatcggcg
     5581 tacgcaattc gtgtgccgcg tcggcgacaa accgctgacg gtggcggatg tcttcatccg
     5641 cacgtttcaa aagcaagttg atggcggtta cgaaccctct gatttcactg ggaatattgt
     5701 ccacactcaa ggcagacagg tcattgattc ggcgttgttc gagactttgc gacaatttgc
     5761 ggacggggcg catggctttg tgcgtaatcc acacggtcag cagtatcatc agcggcagtg
     5821 ccgccagcag gggcaacacg ctttgccgtg ccgcatccgc cgccaaatct tcccggtatt
     5881 cgctttcctg catcacggca atccgccccc gctccgtcgt gcggatatag acgcggtaat
     5941 aatcgtcgtc cccgtccgcc tgaagcgtgt gcagaccgtc cgccagatgc gcaggcaggc
     6001 tgacaacagg gtcttcctgc tgcggcatct gtaccaaaat acgcgtatcg ccgtcgccct
     6061 cgggcaaagt ttcgggtttg gaatcggggg cgacgtacaa tgccgcctga cggagcaggt
     6121 cgtcctgcaa cgcttccgtt tcgtggaagg tttcgtagta ggaaaacata cctgcaagca
     6181 ttgccagcgg aacaaacatc caaaccgtcc gccccggcaa acccaaatcc agcagcatca
     6241 agtcataagg ctgggcagcg gcagccgcgc gccgtttttg acccaatcca ccgcatagcc
     6301 gccgtctttc aaacttgccg acaccgcctc cgcaatcatc gcatcgtctt ccaccagcaa
     6361 aacacgcatc aactttccct ttcagacaaa ccgtgcctat tctaacaccc caaaattagc
     6421 cgcaatttag cggcctttac gcttgccggt atttttcaaa actgcagcac aaaaaaaccg
     6481 cgccggcaac tgccttcaga cggcattggg gcgcgattgc aacacacggg caggcaggca
     6541 gagcctgcga cagaccacag gaacgattcg ggcttcagac ggcttcgccg tttacggcag
     6601 aggcacgatt cctgccgcta tcgaactggc caatatcgcc agcgacaaac cccacgccca
     6661 aaaaaacgaa taacggatgt gtttgcccat cgacaatttc gccaaaccca agcccatcca
     6721 caaagccggc gaaagcggcg taacaaaagt gccgacgata ctgccgatca acatcgcata
     6781 acctgctgct tcgggcgcca cgcccgcctg cgaggtaatc tgctccacaa tcggaaacag
     6841 tccgaaataa taagcgtccg tactcaaaac caactcaagc ggaatgccca acacaccgat
     6901 ggcaatatgc agataaggca gcagcgcgtc tggcaggata tgcacaatgt ctttggaaat
     6961 cgcgtccaac atccccgcac ccttcaaaat ccccaaaaac gtacctgccg ccaaaataat
     7021 ggacgccatc atcaccgcgc cgccggcgtg ggcataaatc cgctccatct gttcctgcgg
     7081 gctgcggtaa ttcaaaagca acgccgccgt tgcagccagc ataaatacat aacccggcgg
     7141 gaagatgccc gaaaaaagca ggctcatcgc cgccaaaaac agcaggacat tccaccaaaa
     7201 cagtttcgga cgcgccaatt tttgttcttc ttccgacaaa ggcaccggct ttatcaaatc
     7261 cgccacggcg ggcaacgcgc ccaactcccg gacaatccgc cttttttcac gcacacccaa
     7321 aagcagggac agcgcaagga taaacactac accgataatt tgcaccgtca acaaaggttt
     7381 atacaattcg cccacatctg cgcccaacac gcttgcaacc cgcccagtcg gc
//
LOCUS       DBBZXW010000092         7400 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.092, whole genome shotgun sequence.
ACCESSION   DBBZXW010000092 DBBZXW010000000
VERSION     DBBZXW010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7400
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.092"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..128)
                     /locus_tag="ACJJD2_001707"
     CDS             complement(<1..128)
                     /locus_tag="ACJJD2_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7580199.1"
                     /translation="MRKSRLSQYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYF"
     gene            complement(433..1692)
                     /gene="rho"
                     /locus_tag="ACJJD2_001708"
     CDS             complement(433..1692)
                     /gene="rho"
                     /locus_tag="ACJJD2_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HGG7580200.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEAAEFLIGKIKASKNNDDFFELMRGK"
     gene            complement(1912..4296)
                     /gene="ppsA"
                     /locus_tag="ACJJD2_001709"
     CDS             complement(1912..4296)
                     /gene="ppsA"
                     /locus_tag="ACJJD2_001709"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HGG7580201.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTAEAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFAINGDKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLENGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4707..5528
                     /locus_tag="ACJJD2_001710"
     CDS             4707..5528
                     /locus_tag="ACJJD2_001710"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HGG7580202.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(5768..6430)
                     /locus_tag="ACJJD2_001711"
     CDS             complement(5768..6430)
                     /locus_tag="ACJJD2_001711"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7580203.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLIKLGAGITPDHPDYARWRTEYLEEYDRRYAQDTELFDGVNELIAELNQRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTDSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(6443..7270)
                     /locus_tag="ACJJD2_001712"
     CDS             complement(6443..7270)
                     /locus_tag="ACJJD2_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HGG7580204.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNTPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPVALFRSLITRYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT         1543 a         1778 c         2167 g         1912 t
ORIGIN      
        1 tgaaaataat aggctgcggt atttttatta acgcctacta actctgctgc tgttcttgca
       61 gttacacctg cgacaaacag ttcaatgagt ttattttgtt tatactggct tagacgactt
      121 tttctcatag gggcaactct aacttaattt gaatttccct agttatctag gacagcccca
      181 aatttataca aaaatgagcg cggttcggcg caaccttgaa tcaagttccc gcatcggttt
      241 tcattgccgg tacggatgcg ttcaagccgg ttttgcaaag gccgcgcttt cggcaagcgg
      301 acacggacac tgccggcggt tgcgccgtta acggggggag ggaggagctg cgccggccgt
      361 gtgaatgaaa gtgccgtctg aaacccgatt ttcaggtttc agacggcatt tcgcctaatg
      421 tcgatgatgt gtttattttc cgcgcatcag ttcaaagaaa tcatcattgt ttttagaggc
      481 tttgattttt ccgattaaaa attcggctgc ctcgatttcg tccatcgggt gcaggaactt
      541 gcgcagcagc cacatacgtt gcagctggtc gttcggcaca agcagctcct cgcggcgcgt
      601 gccggatttg ttgatgttga tggcggggaa gagacgtttt tccgccatac ggcggtcaag
      661 gtgcaattcc atattgccgg tgcctttgaa ttcttcgtaa atcacatcgt ccatacggct
      721 gccggtttca accaatgctg tggcgatgat ggtcagcgaa ccgccttctt ccacgttgcg
      781 cgccgcgccg aagaaacgtt tggggcggtg cagcgcgttg gcatcgacac cgccggtcag
      841 gattttgccc gaggtaggca cgacggtatt gtaggcgcgg gcaaggcggg taatcgaatc
      901 aagcaggatg accacatctt ttttgtgttc taccatacgc ttggcttttt caagcaccat
      961 ttcggcaact tggacgtggc gttgagccgg ctcgtcaaag gtggaggaga ctacttcgcc
     1021 tcggacggaa cggctcattt cggttacttc ttcgggacgc tcgtcaatca agaggacgat
     1081 gagttcgact tcgggatagt ttgcggtaac ggcgtgggca atgttttgca gcatcacggt
     1141 tttaccgctt ttgggcgggg caaccaagag ggcgcgctga cctttgccga tgggggaaat
     1201 caggtcgata gcacgtccgg tcaggttttc ttcggacttt aagtcgcgtt ccagcttcaa
     1261 ctgttcggtc ggaaacagcg gggtcaggtt ttcaaacagg attttatggc ggcatacttc
     1321 cgggtggtcg ccgttgatgg tatcaagcct gaccagggca aaatagcgtt cgttgtcttt
     1381 tgggacgcgc acgcttcctt cgatggtgtc gcccgtatgc aggttgaagc ggcggatttg
     1441 ggtgggtgag acatagatgt cgtcgggacc ggcaagatag gacgtgtccg cgctgcggag
     1501 gaagccgaag ccgtcgggca ggatttcaag cgtgccggag caggtgaaac cctcgccttt
     1561 tttcatcatc tggcggacga tggcaaatac gaggtcttgt ttgcggaatc ggttggcgtt
     1621 ttcgatgccg tgttcttccg ccaattctaa gagtttggaa atgtgcaggg tttgtaattc
     1681 ggagacgtgc ataataatga tgtattttga agaggaaaaa gacaggcaga tgccgtctga
     1741 aagaagaagc tgaccgttgc cggttgctcg gggaaggggg aattgtaggc agtcggcgcg
     1801 tgggtgtcaa atattatcgc ggacggggca tcggcagaaa atgccgtctg agcggagctg
     1861 cttggaaaaa aatacccccg cgcttttcag gctcgggggt atgggcattg attatttgtt
     1921 caattcattc gccaaataca gccaagtttc gatgacggta tccgggttca gggaaacgct
     1981 ttcgatacct tcctcaacca gccatttggc gaagtccgga tggtcggacg ggccttgacc
     2041 gcagatgccg acatatttgt tctgcttgcg gcaggcggag atggcaaggt gcagcatcac
     2101 tttgacggca gggttgcgtt cgtcaaacga ttcggatacc aagccgctgt cgcggtcgag
     2161 accgagggtc agttgggtca tgtcgttcga gccgatggag aagccgtcga agtattgcag
     2221 gaattgttcc gccaataccg cgttgctcgg cagctcgcac atcataatca ggcgcaggcc
     2281 gtttttgccg cgttccaagc cgttttcttt cagggctttg acaacggctt cggcttcgcc
     2341 caaagtgcgg acgaacggaa tcatgatttc aacgttggtc agacccattt catcgcggac
     2401 gcgtttcaag gctttgcatt ccaaggcgaa acagtctttg aagttgtcgg cgacataacg
     2461 cgccgcgccc cggaagccca acatcgggtt ttcttcatgc ggttcgtata cgttgccgcc
     2521 gaccaggttg gcgtattcgt tggatttgaa gtcggacata cggacgatgg ttttacgcgg
     2581 ataaaccgat gcggccaatg tcgccacgcc ttcggcgatt ttatcgacgt agaagtcgac
     2641 aggggacgcg taaccggcga tacggcgggt aatttccgct tttaattcgt cgtcttgttt
     2701 gtcaaattcc aacaaggctt tcgggtggat accgatttgg cggttgatga taaattccat
     2761 acgcgccaag ccgatgcctt cgctgggcag gttggcgaag ctgaatgcga gttcggggtt
     2821 gccgacgttc atcatgactt tgacgggtgc tttgggcata ttgtccaagg cgacatcggt
     2881 gatctgtacg tccaacaggc cggcatagat gaagccggta tcgccttcgg cgcaggatac
     2941 ggtcacttcc tgaccgtttt ccaagagttc ggtcgcattg ccgcagccga cgacggcagg
     3001 aatacccagt tcgcgcgcga tgatggcggc gtggcaggta cggccgccgc ggttggtcac
     3061 gatggcggaa gcacgtttca tcaccggttc ccaatccggg tcggtcatat cggtaacgag
     3121 tacgtcgccg gcttcgacgg aatccatctc ggaagcatct ttaatcaggc gtaccttgcc
     3181 ctgaccgact ttctgaccga tggcacggcc ttcgcataat acggttttat cgccgttgat
     3241 ggcgaagcgg cgcaggttgc ggctgccttc ttcctgggat ttgacggttt cggggcgggc
     3301 ttgcaggatg tagagtttgc cgtccaagcc gtcgcgtccc cactcgatgt ccatcgggcg
     3361 gccgtagtgt ttttcgatgg tcagtgcgta atgcgccaac tcggtgattt cttcgtcggt
     3421 aatggagaag cggttgcggt cttcttcggg gacatcgacg ttggttaccg atttgccggc
     3481 ttcggctttg tcggtaaaaa tcattttgat gtgtttcgaa cccatggttt tacgcaggat
     3541 ggcgggcttg cccgctttga gcgtgggttt gaacacataa aattcgtccg ggttgaccgc
     3601 accttgtacg acgttttcgc ccagaccgta agaggaggta acaaagacga cttgatcgta
     3661 gccggattcg gtgtcgaggg tgaacatcac acctgatgcg ccgctgtcgg aacgcaccat
     3721 gcgttgaacg ccggcggaaa gggcgacgat atcgtgttcg aagcctttgt ggacacggta
     3781 ggaaatggcg cggtcgttgt acagggaggc gaatacatgg tgcatcgctt ctttaacgtt
     3841 ttccaatccg ttgatgttca agaaggtttc ctgttggccg gcaaatgatg cgtcgggcag
     3901 gtcttcggcg gttgcggaag agcgtacggc aacggaaatg tccgcgccgc cggcatcggc
     3961 aaccattttg ttccatgccg cttcgatttc ggcatcgagc tgttcgggga agggtgtgtc
     4021 caaaatccat tggcggattt ctttgccgac gcgtgccagt tcggcaacgt cttcgacatc
     4081 caattttgcc agtgcggcgg aaatgcgttc gctcagaccg ttgtgtgcga ggaatgcgcg
     4141 gtaggcttcg gctgtggtgg caaagccgcc ggggacgcga acgccttttt cggtcagctg
     4201 actgatcatt tcgcccagcg aggcgttttt accgcccacg cgttcaacat ctgtcatacg
     4261 caggttttca aaccaaatta cgtagttgtc ggccatttgt gtgtccaatc caaaatatgt
     4321 taaaaaagaa acaaatccgc gtgcttattt taagcgattc gttcctctgc tgtcatgtgt
     4381 tttatccgtt ttaaaatcat gatgccgtct gaaaaattgc ggtttcggcg tgtgtagcgg
     4441 tttgaaactt gcagccggta tacttctttt tttgggtatt ttctttgtaa aacaggtggt
     4501 ttgaataggt taatgttttt tctgtttgat ttttttgttt attttttaaa attttctgcc
     4561 aaaaaatact ttatataaat aattttattt caaaattata ttgtgtctgt ttgggtgtaa
     4621 tccgaggtag gcgtgctgcg ggtgctttcc ttgtgtctgc cgctgctgtt atgatgatat
     4681 ttttattctg tatttaagga tggaagatga gcagtccgcg ccatgtgttt tacatttccg
     4741 accgtaccgg tctgactgcc gagaatatcg gcgaggcttt gctgaaccag tttggcaatc
     4801 tgtcgttcaa acgccatacg catccgtttg tcgatacgcc ggaaaaggcg cgcgcggtgg
     4861 tggagaaggt caatcggagc cggcaggaaa acggtcagcg tccgattgcg tttgtcagtg
     4921 tggttgatga cgaaatccgt cggattatca aaggggcgga tgcttttcag attaatttct
     4981 ttgagacttt tttgggactg ttggagaaag aactcaatac cgaagccacg gcatccgagc
     5041 aggggcatca cagtatcggt aatacgaagc gttacgatgc gcgtatggag gcggtaaatt
     5101 tctcattgaa ccacgatgac ggggtcagcg ataagaacct tcaggaagcg gatgtaatct
     5161 tgatgggtgt atcgcgttcg ggcaaaacgc cgacctgcct ttacctcgcc ctgcaatacg
     5221 gcatccgtgc ggcaaactat ccgctgattc ctgacgattt ggaatcggcc gatctgccgc
     5281 gtatggtcaa gccttatagg gataagctgt tcgggttgac catccagccg gaacgtttgc
     5341 aggccatccg ccaagagcgc cgcccgaatt caacttatgc caaaatcgat acatgccgca
     5401 gcgaggtggc agacgcgcag agtatgttca gacggcatgg gattccgttt gcgaatacga
     5461 cggataaatc agtggaagag cttgccgtac acatccttca ggcgtgcaag ctcaaacgca
     5521 ggttttgacg ggttttgatt cggtttgaag gtggaaatgc cgtctgaaat caggtttcag
     5581 acggcagttt tatagtggat taacaaaaat catgacaagg cgacgaagcc gcagacagta
     5641 caaatagtac ggagccgatt cacttggtgc ttcagcacct tagagaatcg ttctctttga
     5701 gctaaggcga ggcaacgctg tactggttta gatttaatcc actatatgtt tgtggggcgg
     5761 atatttttca gggctgtatt ttgtccagac attcgagcag atcgagcggc gttcggatgt
     5821 ggaaatccgc ctgccatgag tcggtatcgt cttcatctga gatgtagccc cattcggcga
     5881 ggacggtttt catgccggcg ttgcggcctg cttggatgtc gcgttcggca tcaccgacgt
     5941 agagtgtgtg ttgcgggtcg gcgtggattt gtccgcacgc atacagcatg ggtttgatgc
     6001 tgggcttggg ttcgccgcag gtgtcgccgc tgacgacgac ggcgggtggg atgatgaagc
     6061 cgagtttggg gacgagtttg tcggtgaagc gcatgggttt gttggtgatg atgccccatt
     6121 tgatgccgcg ttggttgagt tcggcaatga gttcgttcac gccgtcaaag agctcggtgt
     6181 cttgggcgta gcggcggtcg tattcctcca gatattcggt gcgccatcgg gcatagtcgg
     6241 ggtggtcggg ggtgatgcct gcgccgagtt tgatcagtcc tgccgcgccg tggctggctt
     6301 gggtgcggat ctcgtccatg ctttttgcag gtagtccgtg gcgagcgagc agggtgttga
     6361 gtgcgcctcc gaggtcgagg gcggtgtcgg caagtgtgcc gtcgaggtcg aagagtacgg
     6421 cgtgtatcat gtgtgttcct tttcagacgg tatttttgtt ctgtttcaaa ccctgctcga
     6481 aatcttccag catatccaat tcaaagcggc tgaagcccgc tttttcgcgc gcttcgatgt
     6541 tcacatagcc gcggaagata aacatatcgt aacgggtaat cagactgcgg aacagggcga
     6601 caggttccaa accgcgttcg cggcagaggt gttgatacca atggttgccg atggcgacat
     6661 ggcccacttc gtcgcggtaa atgatgtcca atacgccgca ggtttccgaa tcgccgcgct
     6721 gcgccacctt cgcgcgtatc cccggcgtaa cgtccagccc gcgcgcttcc aacacgcgcg
     6781 gtaccaacgc catacgcaac agcgggtcgt aggcggtttt gtacgccata tcccacaaat
     6841 ggttgtgcgc ctcgaaactg ccgtaatcga agccgaaagc gcgcaatctg tcgcgcatca
     6901 ggcggaaatg gtacacctct tccttcgcca ctttcaccca gtcgcggaca aactgaaacg
     6961 gcagcgtgcg gaaacggtat gccgcgtcca aagctagatt gacggcgttg aattcgatat
     7021 gcgcaatcgc gtgcagcatc gccgcatagc cttctgccgt gttcattttg cgcggggtca
     7081 gttgcgacgg cgcgaccaaa acaggcttgt ccggccgtcc cgctcggggg aagtccgccg
     7141 gcggcgtgtt tgtttcagca ccgtccatgt tctgaacggc ggcaaacgcc tcatccgtca
     7201 gccgtccttt ttcatctggg tcgcccgaaa gcagggcgcg ttccagcaaa gcataaatat
     7261 cgagtttcat ctcaagtccg ccgtgttcgg aaaacaaata ttatagcgtt ttaaaaaaaa
     7321 caagatgagg catataatct ccgcgattcg gcattccgcg cccaaaccgt caaatatagt
     7381 ggattaacaa aaaccggtac
//
LOCUS       DBBZXW010000093         7371 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.093, whole genome shotgun sequence.
ACCESSION   DBBZXW010000093 DBBZXW010000000
VERSION     DBBZXW010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.093"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(108..2711)
                     /gene="pepN"
                     /locus_tag="ACJJD2_001713"
     CDS             complement(108..2711)
                     /gene="pepN"
                     /locus_tag="ACJJD2_001713"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HGG7580205.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLFVKINGAAADYVLEGEMLTIAGVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRATMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAVAFDYQGKRATEAVLLLA
                     EAEQTFPLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGVELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLCADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2923..3717)
                     /locus_tag="ACJJD2_001714"
     CDS             complement(2923..3717)
                     /locus_tag="ACJJD2_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HGG7580206.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWSEFAQAWK"
     gene            complement(3834..3968)
                     /locus_tag="ACJJD2_001715"
     CDS             complement(3834..3968)
                     /locus_tag="ACJJD2_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580207.1"
                     /translation="MPSERIFRSILRLVGVSSETVKQKFAGVELSYAGKAAGESLYCL
                     "
     gene            complement(4468..5337)
                     /locus_tag="ACJJD2_001716"
     CDS             complement(4468..5337)
                     /locus_tag="ACJJD2_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HGG7580208.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWSEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIRTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLQFYPAWKSFPGEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5388..5924)
                     /gene="ruvC"
                     /locus_tag="ACJJD2_001717"
     CDS             complement(5388..5924)
                     /gene="ruvC"
                     /locus_tag="ACJJD2_001717"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HGG7580209.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADAS
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(5927..6166)
                     /locus_tag="ACJJD2_001718"
     CDS             complement(5927..6166)
                     /locus_tag="ACJJD2_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HGG7580210.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6197..7207)
                     /gene="dusB"
                     /locus_tag="ACJJD2_001719"
     CDS             complement(6197..7207)
                     /gene="dusB"
                     /locus_tag="ACJJD2_001719"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HGG7580211.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTS
                     DPTLRNTKKTLHRSDFADEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPA
                     KKVCNAQAGSALMQNEPLVAAILEAVVRAVDVPVTLKTRLGWHDDHKNLPAVARIAED
                     CGIAALAVHGRTRTQMYKGEAAYDLIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHVRAMHAFYGETAGV
                     RIARKHIGWYIDEMPDGEQTRREINRLDSAAAQYDMLAGYLERLAGKTDRWACAYRQN
                     AV"
BASE COUNT         1656 a         1944 c         1948 g         1823 t
ORIGIN      
        1 atatgacttt gcggccgttt tgccattgcg taataaaacg atggggaagt gatgataaaa
       61 cgtgtgtgta actatatcag acggcattgt ttttctgttt gacggcctca atccaaaatt
      121 ttgccgacga tttcgcccac gtctttcgac aatccttcct gcgcccgaat gcgctgcaat
      181 gcttgtttca ccaagttttt gcggtgcggc tcgagcttgt tgcagaggtt gaacgcctgc
      241 accaggcggg cggcgacctg cgggttaaag cggtcgattt cgatgacttt gtcggcgatg
      301 aagcggtagc cgctgccgtc ttctgcgtgg aaatgcggga cgttgcggct gaagctgccg
      361 atgagcgagc gggctttgtt gggattttcg aggctgaact tcggatgctg caaggcggtt
      421 tgaacctgtt gcagggtgtc gctgcggcgg cttgagccga cgagggcgaa atatttgtcc
      481 atcaccagcg cgtcgtctga aaacttgtcg gcaaactgag ccagcaggcg gttgcgcgta
      541 tcgctttcgt tgccgttaac ggcggacagg atgccccatt cgtgggtcat gttttgcgcc
      601 atttcgccgt atttttcggc aacggtttcg atgtgcgcgg ggtcggcgca caggacgaag
      661 gcgcggcaga cgttgcgcag cgtgcgccag ccggcagctt cggggctgta ctcgtagctt
      721 tggttttcct gcttcgccgc ctgacggttc aattcgtgcc atttcggcag gaagcggacg
      781 gcaagcgtat ccaacaaggc ttcgcgcgcc tgatggtagc gcagcgggtc gatgttttct
      841 gcgccgtccc acagttcggc ttcagacgga acgcccaaaa gcagggcttt gaaggcgttg
      901 tccaagaggt cgtctgaaat gactttttcg acggcggcaa gcagtttttc atgtttcggc
      961 aactcgacgc cgtctgaaag cgcggcaagg ttggcggcga cggcgcggcg gtagagcgtt
     1021 tgcgcggctt cccagcgcgt gaaggcgtcg ctgtcgtggg caagcaggag cagcaggtca
     1081 tcgtcgctgt acggatagtt cagatgcact ggcgcactga acccgcgcag cagcgaggga
     1141 acgacggctt cggttacgcc ttcgagcggg aaggtctgtt cggcttcggc cagcagcaac
     1201 acggcttcgg tcgcgcgttt gccctgataa tcaaatgcca ccgcttcgcc gttgcggttc
     1261 agcagcccga ttttgacggg aatcatcatc ggctgcttgt ccgccatatc gggcgtgggc
     1321 ggcacggttt gtttaatggt caactcgaaa acattgtttt tcagacgacc ttccgcttcc
     1381 aaaacgggcg tgcccgcctg gctgtaccac aaggcgaact ggtcgagatt aatgccgttc
     1441 gcgtccgcca ttgtcgcgcg gaaatcgtcg caggtcacgg cttgcccgtc gtggcgttgg
     1501 aaatagagct tcatgccttt ttggaagccc tcttcgccga gcagggtgtg atacatccgc
     1561 accacttccg cgcctttttc ataaacggtc atggtgtaga aattgttcat ctcctcatag
     1621 ctggcggggc gcaccggatg ggcggtcggg cctgcgtctt cggggaactg gtgctggcgc
     1681 agcaggcgga tgttctcgat gcggcgcacg gcgcggctgg cgcggtcgcc ggaaaattct
     1741 tggtcgcgga acacggtcag cccttccttc agtgaaagct ggaaccagtc gcggcaggta
     1801 acgcggttgc ccgtccagtt gtggaaatat tcgtgtccga tcacggattc gatgccttca
     1861 aaatcggtat cggtggcggt tcggctgtcg gcaaggacga acttggtgtt aaagatgttc
     1921 aaacccttgt tttccatcgc acccatattg aaatcgccta cggcgacgac catgaaaata
     1981 tccaagtcgt attccaagcc gaagcgcgtt tcgtcccact tcatcgcgtt tttcaaggat
     2041 tccacggcaa agccgacctt gggcttgtcc gcttcggtgg tgtaaaactc gattttgacg
     2101 tttctgccgc tcatggtggt gaaacggtct tccgttaccg ccaaatcgcc cgcgaccaaa
     2161 gcaaacaaat agctcggttt ggcaaacggg tcttcccatt tcacccaatg gcggccgtct
     2221 gaacactcgc cgccgtcgat tttgttgccg ttggagagca aaacgggata gcgttttttg
     2281 tccgcaacga tggtggtcgt gaatttggac atcacatccg gacggtcgat gtagaacgtg
     2341 attttgcgga agccctccgg ctcgcattgg gtaaacagat tgccaccgga agcatacagc
     2401 cccatcagcg atttgttttc cgccggcagg atctcggttt ccacttcgac ggtgaagcgt
     2461 tcggacggca cgcctgcaat cgtcagcatc tcgccttcca acacataatc cgctgccgcc
     2521 ccattgattt tgacgaacaa gagtttcgcc gaaccgtcca acaccagcgg ctctcctacc
     2581 ctctgcggct cgaccgtcaa acgtgatttc acgacggttt gcggttcggc aatgtcaaaa
     2641 tgcaggtcgg tttcaaggat gcggtaggca ggcgtttggt aatctttcag ataacggacg
     2701 gttttgctca tttttttctt tcaatattgt ttggtttgac tggaaaaggc ttcagacagc
     2761 acggatacag cttttaaagc ggattaacaa aaatcaggac aaggcgacga agccacagac
     2821 agtacagata gtacgggctg taccggtttg aatttaatcc accatatgcc gtctgaaacc
     2881 gaaacggcgg cacaagcgta ccgccttcgg acagcaggtt ttctatttcc acgcttgggc
     2941 aaattctgac caatgcggtt tatcttctgt ttgggcggaa agatagtttc tgatccgctt
     3001 gatttccatt tcgtattcgt ccgcgtcgaa tctgccgctg accagacaaa aacgcagata
     3061 catcaaatac gtattcacgg catcggtttc gcaataattg cggatttctt tcagcctgcc
     3121 cgcgtggaac gcatcccaca ccttgctgcc gtccataccc agcttgcccg gaaaaccgca
     3181 cagtttcgcc atatcgtcca gcggcacgtt tgccctcggc tggtaaagcg cgagcaaatc
     3241 catcaaatcg cagtggcgtt ggtgataacg gctgatgtag ttgttccact tgaaatcgcg
     3301 gctgtcgccg aaatcgccgt cgcccatatc ccaatagcgc gcggcgttaa tgccgtatat
     3361 cagggagcgg taatgcagaa ccggcaggtc gaaaccgccg ccgttccaac tgaccagttg
     3421 cggcgtatgt ttttcaatca actcgaaaaa tttggcaatc acgacttctt cgccatcgtc
     3481 catctcgccg atggtgccga catggacttt atcctgcccc caacgcatgc agcacgaaat
     3541 cgccacaatc tgatgaagat gatgctgcat aaaatcccca cccgtctgag cacggcgttt
     3601 ttgctgggca aacagcacca cttcatcgtc gggcagcgag gacggcagct cgtacaatgt
     3661 tcggataccc tgcacatcgg gtacggtttc aatatcgaaa gccaaaatcg tattcatggc
     3721 agtaccttgc attcaaaaac agacttgcgc ctattgtgtc attaaaaggc ggataaaaaa
     3781 agaggcaacc ccccacagga ttgccccaat acctcaaatc agagatttac gcttcacaaa
     3841 caatacaggc tttcgcctgc ggctttgccc gcgtagctca actctacgcc ggcaaacttt
     3901 tgtttcaccg tttccgatga aaccccgacc aatcgcaaga ttgaccggaa aatcctttca
     3961 gacggcattt cctgcctgtc gtgtaattcc atgtagcgaa atgtacgcca ttttctacgc
     4021 tttgccaagc attttttaca atataaatgt caaaacatta attttataaa attgctgaaa
     4081 atattaaata tatgaatttt tattttaaat attttaataa atataaattt aattttgatt
     4141 tatatttaaa tttaagcata aaatgttaaa tattaaaggc aatatgaaag gcatatatta
     4201 aatatttatt tataacgcta tgtttttaaa gaaaattaat tttaatatat taactagatt
     4261 gtctgcagat attcatgggt ttgcggtatt tcttccaaaa cctgcttcga attttccgac
     4321 caagtcttaa aaatattgtt ttttgagata cttaaatagc agcgattatc aaatgaaatc
     4381 tgttcatata atctgccatt tcgcatttaa aaaaacaaac aggagtttcg actcgaaacg
     4441 cctgatatgt tttgtaattt tacgtagtca gtaaaaatcg gggctgcctt ccggacgggt
     4501 tttaaaacgc ttgtgcagcc aaaaatattg ttctggatgt tcgcgcaccc gctcttcgat
     4561 aaagcggttc atacgctgcg catcggcttg cgcgtcttca cccggaaagg atttccaagc
     4621 cgggtagaat tgcaatgtaa ccgtattgtc cgcctcgcgg acagggatgg cgggtatcac
     4681 ttttgcattt gcaagcgcgg caatgcggct caatccggta atcgttgccg tccgaatacc
     4741 gaagaaatcc acaaaaaccg aatcgttgcg tccgaaatcc tgatcgggca gatacagaaa
     4801 cggcgcgctg cttttgcgga actgtttgac gagggcgcgc agcccttcgg tgcgcccgat
     4861 aaggaagacg ttgtcgtagc ggttgcggcc tttcaaaatc tgtgcgtcca atatcttgtt
     4921 tttttggtgg gaatacatac taattagcgg gacatcctga ttaagcgcgt acaccgccat
     4981 ctcgaacgcg gtaaagtgcg gatacaggat gatgactttt tcccccgccg ccagcgcgtc
     5041 gtccaaataa tgcttattgc ggtagcgcac cagcgatttc aaacgcccgg cgggcgcgta
     5101 ccaatataag ccgtattcga gcatcagttt cgccatatgt ttgaaatgct gtttcaacac
     5161 ggttttacgc ttttcctcac tccattcggg aaaacatttc gccaaattga tttcgccgat
     5221 acggcggcgg ggtttgacca aaaggtaggc aagcaaaccc gtcagatcgg caagtttgtg
     5281 cagcagcgca aacggcagaa actgcaaaac atacagtaca aaaaatataa atttcatctc
     5341 gatacacatt ttcttttcag acggcaaaat acaaatgccg tctgaaacta ttgaaacctg
     5401 ccgcgcttga cctgcatccc cgaaggattg agtttggcgg caagcccgtg gttgcgtaag
     5461 gcgtgggtca gcgcgacggc aagaccgtcc gccgcatccg cctgcggcgt tcccgaaagc
     5521 cccagcatct gcaccaccat atgctgcacc tgttctttcg ccgccttgcc tttgccgact
     5581 accgcctgtt tgacctgcaa ggccgtgtat tccgaaacgg gcagcttatg gctgaccaat
     5641 gccgccaatg ccgcgcccct agcctgaccc agcatcagcg tcgatgcagg attgacgttg
     5701 acgaacacct gttccactgc cgcctgttga ggcttgtaaa cggcaacgac ttcgccgata
     5761 tgccgcacaa tcacggcaat cctgtctgcc agagacgcat cggcaggcgt tttgatgcag
     5821 ccggaggcaa cataaaaatg atcccgcccc ctgacatcga tgatgccgaa acccgttacg
     5881 cggctgcccg ggtcaatgcc caagatacgg acggttgccg acatattcac aacaaaccgt
     5941 gttgaatcag ttttttacgc aaggtattgc ggttcagccc cagcatcacg gaggctttgg
     6001 actggttgcc gccgcattgc tccatcacgc acaccagcag cggtttttcc acctgatgca
     6061 agaccatatc gtacacgccg caaggttcgg taccgttcag gtctttgaaa tattgttcca
     6121 aattttgtct gatacattgg gaaatatcgg gaagggtatg gggcataatc gcgctttcaa
     6181 aaggataatc gggtgttcag acggcatttt ggcggtaggc gcacgcccaa cggtcggttt
     6241 ttccggcaag tctttcaaga taacctgcaa gcatgtcgta ttgcgccgcc gcactgtcca
     6301 agcggttgat ttcacgacgt gtctgttcgc cgtcgggcat ttcgtcgatg taccagccta
     6361 tgtgtttgcg tgcaatgcgc acaccggcgg tctcaccata aaacgcgtgc atggcgcgga
     6421 cgtggttcaa aatggcggca ctgcattctg ccaaactcaa ggcaggcggt aaaacaccgt
     6481 gttcggcgta atgtttcaaa tcgcggaaga accacggtct gccttgcgcg ccgcgcccta
     6541 tcatgatgcc gtctgcggcg gtttgtttaa ggacggcttg ggctttttgc ggcgaagtaa
     6601 tgtcgccgtt gacccaaacc gggatgttca gacggcattt ggtttcggca atcaggtcgt
     6661 aagccgcttc acctttgtac atttgcgtgc gagtgcgtcc gtggacggca agggcggcaa
     6721 tgccgcaatc ttcggcgatg cgggcgacgg caggcaggtt tttgtggtcg tcgtgccagc
     6781 ccaaacgggt tttgagggta acgggtacgt ccaccgcacg gacgacggct tcgagaatgg
     6841 cggcaaccag cggctcgttc tgcatcagcg cgctgccggc ttgggcattg cacactttct
     6901 tggcgggaca gcccatgttg atgtcgataa cctgcgcccc aaggctgacg ttgtaacgcg
     6961 cggcatccgc catctgctgc ggatcgctgc cggcaatctg cacggcaacg atgccgcctt
     7021 catcggcaaa atcgctgcgg tgcagggtct ttttggtatt tctaagtgtc gggtcgctgg
     7081 tcagcatttc gcacaccgcc caacccgcgc cgaaatcgcg gcagaggcgg cggaagggtt
     7141 tgtcggtaat gcccgccatc ggtgcaagtg cgatggggtt gtcgataaaa tagccgccga
     7201 tgtgcataat ggatccgcgt ttcaaaaaag tgcgccattg tacatttttt aagcaggatt
     7261 tccaatctcc ggacgcgccc gcgattgggg cggacaccgt tttatggcat aatccgcaca
     7321 cagattccct gccccgccac tcacaggcgg gcagtttata gtggattaac a
//
LOCUS       DBBZXW010000094         7329 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.094, whole genome shotgun sequence.
ACCESSION   DBBZXW010000094 DBBZXW010000000
VERSION     DBBZXW010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7329
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.094"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(176..1588)
                     /gene="trkA"
                     /locus_tag="ACJJD2_001720"
     CDS             complement(176..1588)
                     /gene="trkA"
                     /locus_tag="ACJJD2_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HGG7580212.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAETGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(1686..3209)
                     /locus_tag="ACJJD2_001721"
     CDS             complement(1686..3209)
                     /locus_tag="ACJJD2_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HGG7580213.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTGLLGMIGKSERGAAACEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            complement(3516..4322)
                     /locus_tag="ACJJD2_001722"
     CDS             complement(3516..4322)
                     /locus_tag="ACJJD2_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG7580214.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDEQAAK"
     gene            complement(4374..4625)
                     /locus_tag="ACJJD2_001723"
     CDS             complement(4374..4625)
                     /locus_tag="ACJJD2_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580215.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            4725..5486
                     /locus_tag="ACJJD2_001724"
     CDS             4725..5486
                     /locus_tag="ACJJD2_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580216.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRIRFDAQKDSAEFETGQIEGRENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            5631..6800
                     /gene="metZ"
                     /locus_tag="ACJJD2_001725"
     CDS             5631..6800
                     /gene="metZ"
                     /locus_tag="ACJJD2_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HGG7580217.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VVSSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGAILVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAALIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            6887..7093
                     /locus_tag="ACJJD2_001726"
     CDS             6887..7093
                     /locus_tag="ACJJD2_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HGG7580218.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
BASE COUNT         1566 a         1817 c         2149 g         1797 t
ORIGIN      
        1 aacgggaatc tagaacctct aaattttcag ataacctttg aatattgccg ctatcccaag
       61 gtctggattc ccgcttacgc gggaaggacg gggagggcgg atgccgtctg aagcccacct
      121 accattattt ccgcttccat accgcttggc ggcaatgtgt ccggaatggg gcggtttatc
      181 cgaaaaagcc cattttgacc tggatgagtt tttccagttc gttcaggatg cgccggcgcg
      241 agacgaaaaa gatgatgtgg tcgccgtctt ggatgacggt ttcggtatgg tgtcccataa
      301 tggtttcgcc ggtttcggcg cggacgacgg cggcaatgtg gcagccttcg ggccatttga
      361 tgccgctgat gcgcctgccg atgatggcgg aagttttttt gtcgccgtgt gcgacgactt
      421 cgatggcttc cgccgtgccg cgccggatgg ggtggacggc aacgatgtcg ccgcgccgga
      481 tgtgggcgag tatcgagccg atggtgatga ggtgggggga gacgacgatg tcgattttgt
      541 tgccttcgag caaatcgacg tagcttgagc ggttgacgat gccgataacg cgcttcgcgc
      601 cgaggttttt cgccaaaagg gcggacataa tgttgctttc gtcgtcgttg gtcagggcgc
      661 agaatacgtc gatttcgtcg atgtattcgt tgtcgagcag ggtttcgtcg gttgccgaac
      721 cttgcaggac gagggtgttg tcgaggtttt cggctatcca ttcggcacgg cgcggccggc
      781 attcgatgat tttgacgttg tatgcgtgtt cgagctgctt ggcgagacgg tagccgatgt
      841 tgccgccgcc ggcaatcatg atgcggcggg tgctggtttc tttggggcgc aattcgggta
      901 tgaccgcgcc gatgttttcg gcggcggcgg caaataggat ttcgtcgcct tcgatgatga
      961 cggtttgcgg cgcggggacg atgaggcggt tgttgcggta aacggcgcag atttggcagt
     1021 cggccccgtc gggcaaatct tgggcgatgt cggcaatgct gcgtccgaca agcaacccgc
     1081 cgcgccgcgc ctgtatgatg accatccgca cgcggtcgtc tgcaaaacgt aaaacctgca
     1141 atgcgcccgg gcagtctatc aggccggcaa gctgttcggt aacgagctgt tcggggctga
     1201 tggtttcggt tatgccgaat atggaaaggc tgccgttttc gttgttttcg agcttggggc
     1261 tgaggtattc gaggtattcg ctggaacgga cgcgcgcgat gcggccgggg atgttgaaca
     1321 ggtcggcggc aactttgcag gcgacgatgt tggtttcgtc gctgcgggag agcgcgagca
     1381 gcaagtcggc atcttccgcg ccggcgcgtt ctaatgtgaa gggggatgcg ccgttgccga
     1441 aaacggtttg gacatcgagg cggctgcctg tttcctgcaa tgctttttcg tcgatgtcga
     1501 taacggttac gtcgttgttg ggtatggcgg caaggttttg tgcgacggta gaacctacct
     1561 gtccgttgcc taaaatgagg attttcacgg tgtgggtcgc cgagtgatga aatggtggat
     1621 tgtaccgcaa ccgggggcgg aaatgccgtc tgaaagcaga ttttgtgttc agacggcatg
     1681 acgcctcaag atttgacggg gatgatgccg attttcgcct gccattgggg cggggcggtg
     1741 gcgtggatgg attcgccttt gctgtctacg gcgacggtta cgggcatatc tttgacttca
     1801 aattcgtaaa tggcttccat acccaattcg gggaacgcca agactttgga agatttgatg
     1861 gcttttgcca cgaggtatgc cgcgccgccg accgccatca ggtacacggc tttgttgtcg
     1921 gcgatggctt cgcacgccgc cgcgccgcgt tcggatttgc cgatcatgcc caagaggccg
     1981 gtttgttcga gcatttggcg ggtgaatttg tccatgcggg tggctgtggt cggacctgcc
     2041 ggaccgacga cttcatcgcc gaccggatcg acggggccga cgtagtaaat caggcggttg
     2101 gtgaaatcga cgggcaattc ttcgcctttg ttgagcatat cgacgaggcg tttgtgtgcg
     2161 gcatcgcggc cggtgaggat tttgccgttc aacagcaata cgtcgccggt tttccagctt
     2221 gccacttctt ctttggtcag cttgtcgaca tcgacgcgtt tgccgttgtc ggggctgtaa
     2281 gtcaaatcgg gccagtcttc gacgcgcggc ggcgtgagtt cgacagggcc tgagccgtcc
     2341 aattcaaatt cgacgtggcg ggtggcggcg cagttcggaa tcatggcaat cggtttggag
     2401 gcggcgtggg tcgggtaatc gaggattttc acgtccaaca cggtggtcag accgcccaaa
     2461 ccttgtgcgc cgatgcccag cgcgttgact ttttcaaaga gttcgaggcg cagggcttcg
     2521 gtggtggaca attccgcgcc ggacgcggct ttttcctgca attcttggat gtcgatgtgg
     2581 ctcatcaggg actcttttgc catcaacacg gctttttcag gcgtgccgcc gatgccgatg
     2641 cccaagatgc cgggaggaca ccagcccgcg cccatcgtcg ggatggtttt caatacccaa
     2701 tcgacgatgt tgtcggaagg attgagcatg gcgagtttgg atttgttttc agaaccgccg
     2761 ccttttgccg cgcaggttac ttcgactttg tcgcccggca cgatgctcat atggatgacg
     2821 gcgggcgtgt tgtctttggt attttggcgt ttgccggcgg ggtcggcgag aacggaagcg
     2881 cgcagcgtat tgccttccca agtgtaggcg cggcgcacgc cttcgttaac catttcttcg
     2941 acgctcatgt ccgcatccca ctgcacatcc ataccgactt tgaggaagac ggtcgcgata
     3001 ccggtatctt ggcagatggg gcggttgttt tcggcacaca tgcggctgtt gaccaaaatc
     3061 tgcgtcatcg cgtctttggc ggcggggttt tcttctttct gccacgcttt atagagcgcg
     3121 tcgatgtagt ctttgggatg gtagtagctg atgaattgga aggcatcgca aatgctttgg
     3181 ataaagtctt cctgtttgat gacggtcatg attgtgttcc ttttcaaggt tgtggcggta
     3241 agtgtctgct gctgttttaa gcaacctttt tgaaggctgt tttttatcag gttgaaatag
     3301 tgccagcgtt tgtacggtaa agacaataca taattctaat ctcttgatta tcaatttgtt
     3361 ttaataaaat actgttttac tcggattttg atatttgtaa tctttgcctg ttgctttgcg
     3421 gtagggagaa atcagcaggc agttcattgt aggccgattg atgaacaatg ccgtctgaaa
     3481 gggcttcaga cggcattgtg ttcggacggg cgggcttatt ttgcggcctg ttcgtcttct
     3541 tttgcaaaat atttggcgta aatcttgtcg tattcgccgc tttcgcgtac tttttccaac
     3601 gcatcgttca gcattttgac ggttgcttcg tcgcctttgc gtaccgcgat gccgtagtgt
     3661 tcggtggtga agtcgggcag ggtaacgaag tccatccctt tggtcggatt gtttttcaca
     3721 taattggcga tgaccgcgct gtcgctgacc acggaatcca agccgccgtt ttccagttct
     3781 ttgataatca ggggaacgtt ttcaaagcgc gcgattttcg gattgtcgtt gcccaagagt
     3841 ttggatacgg agaaatcgcc cgtgtagccg gttaccacgc cgactttgtt catgtttttc
     3901 aaatcgtcgg aagaagatat ttttttgcct ttcggaacga ggacgacttg ggtgatttca
     3961 aaatacgggt cgctgaagtc catagactgt ttgcggtcgt cggtaatggt tacgcccgac
     4021 atcacaacgt ccgcatcgcc gttgttcaag gcggggaaaa ggctgtccca cggctggtgt
     4081 ttgaattcga ttttaaaatt gcccgccttc gccatcgcgt tcatcaaatc cacatcgaaa
     4141 ccttcgacat tgcctttcga gtctaaagat tcaaaggggg caaactcggc gttggaagcc
     4201 acgcggtaca ctttgtcggg atttgcggcg ggcgcggcgg catctttacc ctgaccgccg
     4261 caggcagaca gcgcaagcgc ggaacaggca agggcggcgg caatccattt tttcatattc
     4321 atcaaaattc ctttcggtaa tcaaaaagcc taaaaaatca gtttaacata aaattaacgt
     4381 tctttttcac ggaaaaacgc ataagtaacg tcgtggaaca aatcggtatg ggggctgtcc
     4441 tcatagctca attctgccaa ggcgtcctca aaagcaagct gaatcgactc gaccgcgatt
     4501 tcggcggttt cggcgggaag ggcgcggatt aaggctttga atgcggtgga caggacgtgg
     4561 ttctgcatac gcagcacgtc gttcgcctct tccagatatt ccaaacgctg ttcgatgctg
     4621 cccatgatgt atcctcgcga atctgttaaa atgcgccatt atatcaaacc gcgctttggg
     4681 cgcgggtttg tctgcttgca aagattaaga accggaagcc gaaaatggat gcgaataaag
     4741 agccgaattg ggaaaaacgt ttggaaaacc tgcgtcagac gcgccgtatg aaggcagtgc
     4801 cgacttacgc gccgctgtcc cgcccctctg aaaccggaac ggacgcgcct gtgccgaaac
     4861 tggacgatga gagccgagcc cgtgtgttga aggcgtatct gaaaaaatgg caggaggaac
     4921 acaatgccgc cgttgccgat tgcggcgagg aagtcgaaac cgacccgatg attgtccttc
     4981 aggaaaactg gctcaacgcg caggcttccc tgcaaatgtc ggtttcggaa aaacacatcg
     5041 aatcgcggcg gagaatccgg ttcgatgccc aaaaagacag tgccgaattt gaaaccggac
     5101 agattgaagg cagggaaaac gccgatgcgg cagaatcggg tacggcggca gacggggttg
     5161 cggaaaacgg cgaaggcggt gcggaagagg cgttgatgcc cgtccaaatc aatatcctga
     5221 acccgaaagc cgtcaaccgg cgcgaagtgt tctgcctgtc cgaacaggag ctgaccgaac
     5281 ggctgatcaa acgcctgcgc ccgcatctga ccgataccgt caacggcatc atccgaacgg
     5341 cggtgcaaaa gcagatggcg gttttcacct atcagctcca gcagatgctg cacgagcagg
     5401 cgggggcggt agtcgaagac gtgttggaac acgatgtccg caaaatcctc aacgacatca
     5461 agtacgagtt aaaatacaaa cgctgattgc catgccgtct gaaagccgtt tcagacggca
     5521 tttgcattct catccgactt gaaagcatca tagaacaggc gcaaaatatt aacaaattaa
     5581 acaacgggcg cacgctccgt tgccgaacgg acaaaaccga ggaatcaccg atgagcaaaa
     5641 aactccatcc gcaaacgctc gccatacgcg gcggcaaaga acaaaccgaa taccgcgaac
     5701 acaatcaggc attgtttctg accagcagct tcatgtggga caacgcccaa cacgctgccg
     5761 atttgttttc aaaaaaaatc aaagggttca cttatacccg taccgccaac ccgaccacag
     5821 ccgcctttga aaaacgcatc gccgctttgg aaggtgcgga acgcgcggtc gccacttcga
     5881 cgggtatgtc tgcgattcag gcggcgtttt tcaccttttt gcaggcgggc gaccacgtgg
     5941 tttccagccg cagcctgttc ggcacgaccg tcggctttat caataacatc gttaccaaat
     6001 tcggcatcga agtgagccac gtgtcgccga ctgatataaa cgaatggaaa gccgccgtca
     6061 aagccaacac caaactgctg tttttggaaa cgccgtccaa tcccttgggc gaagtggccg
     6121 acttggaagc cttggcggaa ttggcgcacg gcatcggcgc gattttggtg gtggacaaca
     6181 gcctgctgtc gcccgtcggc tcgcagcctt tgaaacacgg cgcggatatt tccgtttcct
     6241 ccgcgaccaa agccatagac ggacacggac gcgtgatggg cggcgtgttg gcgggttcgg
     6301 aagaattgat ggcgcaggcc gccgtttact gcaactcttg cgggctggcg atgtcgccgt
     6361 ttaatgcgtg gcagttgttg agcggcgtgg aaaccctgtc gctgcgtatg gaaaaacagt
     6421 tcgacaacgc cctgaaaatc gcacaatggc tgcaagcgca gccgcaggtt caagccgtgt
     6481 actacaccgg attgcccgac catccgcagg cggcgcttat ccgcaaacag caaaacggcg
     6541 gcggcatcgt catcggcttt gaagtcgccg accaagcagc cgcgtggaaa gtcgtggacg
     6601 gcgtggaact cttttcccgt accgccaacc tcggcgacgt gcgctcgacc atcacccatc
     6661 cgtggacaac cacgcacggc aggatgcagc ccgaagaaaa actcgccgcc aacatccgcc
     6721 ccggattggt gcgcctgtcg gtcggtttgg aatatgttgg cgatttgatt gacgatttga
     6781 aacaggcact cgcacgctga ttgcgtgttt cagacggcat tggacagcag atgccgtctg
     6841 aaacccttat cttatatggc atacacatca acaataggaa aaaaatatgg atgaagcggt
     6901 ttttgccgat tgggcgttga aaatctgcct gaccggcttg attatttttt tgggttttat
     6961 cgtttggaat ttgggcaagg agtccaaagc aggcaaattc ggcatcgcca ttttgttttt
     7021 ggttttgggc ttgggcgtgt tcggttttgt attcaaagaa ctgctgatta agtttttggt
     7081 attgccgaaa taggtttgcg gcctgtcaaa atgccgtctg aaatcataaa aagtaatctg
     7141 caccctaaaa gtttgattta accgccaact gattaaggtg cggattttta tgacaaaata
     7201 aaaatcatct ttccgcagtc attcccacgg acgcgaaagt ctgtcttttt gaatcccgga
     7261 taattttaca tcgtcattcc cgcgcaggcg ggaatctagt ccgttcggtt tcagtcattt
     7321 acgataaat
//
LOCUS       DBBZXW010000095         7311 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.095, whole genome shotgun sequence.
ACCESSION   DBBZXW010000095 DBBZXW010000000
VERSION     DBBZXW010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7311
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.095"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            228..440
                     /locus_tag="ACJJD2_001727"
     CDS             228..440
                     /locus_tag="ACJJD2_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HGG7580219.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            588..2171
                     /locus_tag="ACJJD2_001728"
     CDS             588..2171
                     /locus_tag="ACJJD2_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HGG7580220.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDADLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYAAAFVEHGAEAFVR
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2253..3350
                     /locus_tag="ACJJD2_001729"
     CDS             2253..3350
                     /locus_tag="ACJJD2_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HGG7580221.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3464..4579
                     /locus_tag="ACJJD2_001730"
     CDS             3464..4579
                     /locus_tag="ACJJD2_001730"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HGG7580222.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     VCGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIIGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4704..5159
                     /locus_tag="ACJJD2_001731"
     CDS             4704..5159
                     /locus_tag="ACJJD2_001731"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HGG7580223.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKICQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5230..5706
                     /locus_tag="ACJJD2_001732"
     CDS             5230..5706
                     /locus_tag="ACJJD2_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HGG7580224.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5694..6620
                     /locus_tag="ACJJD2_001733"
     CDS             5694..6620
                     /locus_tag="ACJJD2_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG7580225.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTTEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6685..7242
                     /locus_tag="ACJJD2_001734"
     CDS             6685..7242
                     /locus_tag="ACJJD2_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7580226.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGFTEDLVQKATDKAVANESGNGLKN
                     TAGTIAMARTADPDSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVGQ"
BASE COUNT         1905 a         1805 c         1908 g         1693 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataaatg cgccgattgc caaggcgatg atgctcaacc
       61 agggtttttg cgaagcgttc attgttgtcg tcctgatggg aattgccgcc attatgcgca
      121 agcgtccgtc tttttccaaa ccgccgcacc gtttccgcgt ttgcccaagt tcacgccccg
      181 acttacaata acgcccgtca gattgcagtt ccaacgaaag gaaaatgatg gaaaccctta
      241 tcctcgacat cggcggcatg agctgcggcg gctgcgtcaa aagcgttacc cggatattgg
      301 aaggcgtaaa aggcgtggca agcgtcgaag tcagtcttga aaacaaaagt gcgaccgtcg
      361 gatacgaccc cgcgcaaacc gatgcagggg cgttgattga agccgttgaa gacggcggct
      421 atgatgccgc gttgaaataa agcggcaaaa atgccgtctg aagccttcgc gcctcccaga
      481 tgccgtctga agtacgctcc gcgccttcag atggcatttg atttagttga acgggtagga
      541 tgaattggtt aaacttgcgg gcaatagtgc cttcagacaa acaaaatatg ccgaacaaaa
      601 agaaaaaagc cgcctttgcg cgtgctgcaa cggagaacgg tgtgccggac gtgtccaaca
      661 tcaaaaattc atatgatgat ttgatgtatg aatccaaagc attttcccaa accgccatca
      721 acgccttgga ggctcgcgcc cgcatgatgg gtttgcagcc cgcgcccgcc gccaatgcca
      781 aggtcttgga gctgggctgt tcgatgggcg gcaacatcat cacgcaggct ctttattacc
      841 cggatgcgga atttgtcggt atcgacttgt ccggcaggca ggttgcgcag ggcaacgcca
      901 tcattgaaaa aatgggcttg aaaaatgtgc gtctggaaga aaaagatatt ttgaccgtcg
      961 atgagtcatt cgggaagttt gactatatca tcgtccacgg catttggtcg tgggtgcctg
     1021 acgcagttaa agacaaaatt ttttcgattt gccggaacaa cttgaccgaa cacggcattg
     1081 cctatatttc atacaatgtt taccccggct ggaaacggca ggagcagttg cgcgaaatta
     1141 tgtactttgc cggcagggat gtgcttgaag aacccttgga agcacggacg cggaaaggct
     1201 tggacgcgct caaggcgctg gcggaaattt tagaaaacga caagggcttg gacggcggcg
     1261 gcaaacttcc ggcgattcaa aaaatattga atcataattt ttattacatc gcacacgaat
     1321 atatggaggc gtttaacgac ccgatttacg tcaacggctt catcgaatgg gcaaaccgcc
     1381 accggctggc gtatatcggg gatgccgatt tgcacgcgtc ttttgtttct tggatggcgg
     1441 agcatacgcg ggagcggatt ctggcattgg cagggggcga ttatattgcc aaagaatttt
     1501 acagcgatat tttatccgac cgccaattcc gccgttcgct tttatgccgt gaggaagtcg
     1561 gggatactgt caggcgtgac gagtcggttg ccgtcgaagt gatagaaagt ttgaatttcc
     1621 gcccggcaag aggggaaaca atcaactttg atgaaaacga taccctgctt tcgggcatac
     1681 gcgatgtgat gaaaaccgga gagccgttta aaacggaaga tgttgcggaa aatctcgccc
     1741 gccgatttcc cggtttgaca ttcgaccgta tgaaaatcaa ttcccagctt ttattgcaaa
     1801 ccattctcgg gcgtttttct gtttcatcag acaatgcggg caaacaattt tttgaagacc
     1861 ataaaaccta tgtgccggcg cgttttacag attatgccgc cgcctttgtg gaacacggcg
     1921 cggaagcgtt tgtccggcct gccaaccgtt acaacgaaag caccccctca ttcggatatg
     1981 ggcatttgta cattatgcgg caattgtcgc ggccgacgag caaacaggca ttgattgaaa
     2041 cggttgccga aaacttgaac atcgtcagca ccacgcccga cggtttgaca ttccatccgc
     2101 ctgccgaagt gtatgtggaa gaaatattgg cagacttggc agacaggcat tttctcgttt
     2161 cggcggattg acgggcaagt cccgacggca atccgtccga tatattttca aacaggaaaa
     2221 acacacacta cgaaaagcgg tacacgacac atatgaacca gacatttacc ttgcccgata
     2281 cgcgcccgta tccccaaaat ccgattaaga accacctgct gctcaatgcc taccagttgg
     2341 cgcataattc ttcccaggct tcgcgcaaac tctcgtccgg ccaacttcaa accgaaatca
     2401 gggggatgct tgagcaaaac cactatatca acctttccct cgcgttgacg atgtcgcccg
     2461 atgccggaac ttatgccgcg ctgctttcca gtgtgaacgc ggtactcgat tgcgagaaag
     2521 aaggcgaagt gcagtggttc gccctgccgg tcgtgctggt gtccggctgc aagaaagaac
     2581 gggcaatcga gatgaagctg ccgacggagg cattgtttgc ctgcctgcaa aactatccgc
     2641 acctgcgcgc gttgacgcaa gagacacaat ggctgcctta tcttgtgcat tcgtccgatt
     2701 tgagtgcggt cgcgccggat gagtggtggc gtgccaaaca aaataccgaa gcggcggcgc
     2761 aacacttacg ccgtttcgcc ccgcgccctt tgctgttgcc cgaagggcag tccgtccacg
     2821 tcgtttacgc gctgggtttc ggcagcggca aggttcagac ggcattgggt cagaaccttc
     2881 ttcaggcagg cctgccctta atgcaggtat ggcaggaaaa tcttgcatcg gaaggtgtta
     2941 cgctgtttgc caatccactt tccccggatt ctccggtacg cgcgctttca gacggcagcc
     3001 acacgcgcca gcgtatggcg atggatgttt ttgcggcaaa cgcgatacgc gccgtccgta
     3061 tgcagagtcc gcgcgtcggc gtggtcgctg cggcaaaggc gggcggacag gttttattcg
     3121 ggtttaatgc gaccgacggc gcgtttgaag tcgtgccgca ggtgttttcg tggcagcttt
     3181 cctttaccga caacatcgcc gtcatccagc aaaatttcct cgacctgatg gcggagtgcc
     3241 gcgtggaaca cgtttacctg ttgcacaatc ccttgggcga acaggaaagc atcccgagct
     3301 atgcggaagc attgaaacgg gaagggcaca atccgttttt cagcgcatag tgatttgtag
     3361 tagtgatagg ctttctcatt tatataataa atcaaaataa agagcacaac actttttcat
     3421 tctgtgttgt gccttgagtg aaacgaaagg atgaattata aatatgaaga ttgtaattgc
     3481 accggattcg tttaaggaaa gcttgacagc tcaacaggta gctgaagcaa taaaaagagg
     3541 cttccaacaa tcgatagcag atgtggaatg tctcctctgt cctgtcggtg atgggggaga
     3601 aggcactgta gatgctatcc gacattctct tgacctagaa gaaaaatgtc ttcaagtgac
     3661 aggacctttt ggacaaaaag aagtcatgcg ctattttcaa aaagaacaac tagccctatt
     3721 cgaagttgct gatttggttg gtcttggaaa aatcccgcta gagaaacgaa atccattaca
     3781 aatccaaact cgtggtattg gagaattgat tcgccacctc attagtcaag aaattaaaga
     3841 aatctatatt ggcgttggcg gtacggccag taatgatgga ggtattggga ttgctgctgg
     3901 tttaggttat caattttatg atgaggatgg aaatacctta cccgtttgcg gtcaatcctt
     3961 actaaaccta gcttctgttt caacagaaaa tcgctatgaa attcctgaag atgttcacat
     4021 tcgtatttta gcagatgttg tgagtccctt atgtggacac caaggtgcga cctatacgtt
     4081 tggcaagcaa aaagggttgg attctactat gtttgaggcc gtagatcagg caatacaaga
     4141 tttttatgaa aaagtctccc ctgcaacatt aaaacttaaa ggagcaggag ctggtggagg
     4201 catcgctggt ggtttgtgcg cctttgctca ggcaagtatc gtatctggaa ttgacacctg
     4261 cctggacttg attgactttg ataagaaagt gtcagatgtt gacttggtta tcattggtga
     4321 aggaagacta gatcgtcaaa gtttagcagg gaaagcgcct attggtgtag caaaaagaac
     4381 ccctgtcgga gttcctgttg tcgctatttg tggcagtctc gttgaagatt tgccttccct
     4441 gccatttgaa aatatccaag ctgccttttc tattttggag aaaagtgaac ctttagaaga
     4501 tagtttgaaa aatgccagtc tctatttgga gcatacggct tctaatattg gacacttatt
     4561 aaatatgcct aagatttagc caaaccattt cttccagatg gatgttttgg ctggttctgc
     4621 cttatgcggt tacgattaac cgaccgatgc cgtctgaaag ggtttccgct tcagacggca
     4681 tcgcgccgga acagggaggg gatatgaaaa aaccgaaaat cctttttgtc tgcctcggca
     4741 acatctgccg ttcgccgatg gcggaataca ttttgcgccg ccgcgccgcc gaagcgggca
     4801 ttccccttga agcggacagc gcggggacat cgggctggca cgacggcgaa gatatgcacc
     4861 gcgagacggc aaagatattg aaaaaacacg gtatcgatgc ttcaggcttt accagccgca
     4921 aaatctgcca aagcgatgcg gcggcgtttg actgcatcat cgcgatggac ggcaagaatt
     4981 tgtccgaatt ggaaagaacc ttcggcaggc ggccggaaaa aatattcaag ctgaccgacc
     5041 tgatacccga aagcggttac gaccatgtcc ccgatccgtg gtatacgggc gattttgaag
     5101 aaaccttcag gcttgcggat gcgggctgtc gggcattgtt ggaaaagatt tccaaataaa
     5161 gcaattgaat acaaatataa aaccgcctcc tgccgtatcg gttgttcaga cggcataaac
     5221 agagaattta tgaaaacaaa tttcaaacag aaaattatcg aacaggcacg cagcgaaggc
     5281 ttgcaggtaa ccgctttgcg cgagcaggta ttagatattg tcttgcagca aagcggcgtg
     5341 attaaagcct acaacgtctt gtcgcagatg cagcagcaaa gcgagggcgt gcttgcgccg
     5401 ccgaccgcct accgcgccct tgatttttgg gcggagcagg gcgttttgca caaagtggcg
     5461 gcggtcaacg gctatatttt gtgcagccac gcgcagcacg agtgcgacga ccattgccac
     5521 gaccacgaag aagccgaagc gcaccacagc gcgtttattt tggtctgcac cgaatgcggc
     5581 acggcggacg agcaaaccct cagccacgag tgggcggcac tgcgcgcagg cgttgccgaa
     5641 agcggctttg cgctgaaaga agaacacgtt gttttaactg ggatttgtaa aaaatgtcag
     5701 aagtgaaaaa aaccaaagtc cacctgattt caggttttct gggaacaggc aaaaccactg
     5761 cgctcaaaag cctgatggcg caaaaagacc cgaacgaaaa atgggtcatc atcgtcaacg
     5821 agttcggcga aatcggcatt gacggcgcgg tattgagcga caacggtatc cctgtggcag
     5881 aaatcgccgg cggctgtttg tgttgcaccg ccggcccgca aatgggcgta accgtgcaga
     5941 aaatgctgcg cgacgccaag cccgaccgcc tgatgattga agcaagcgga ctggctcacg
     6001 cagccagcgt catcgacgaa ctcaaagcca aaccgctgga cagccttttg gaaatcggcg
     6061 ccgtctttac cgtcgtcaat ccgcgccagt tcatcaaccc cgattacgcg caacaggcgt
     6121 tgtataaaga ccaaatcggc atctgcgacg tattggtcgc cagcaaaacc gatttatgca
     6181 ccaccgaaca gcttgccgaa tttcacgaca aagcggcaaa actgttcccg cccaaagcca
     6241 aagtggtcga agtccaaaac gcacaactcg acatccggtg gctcgatatt cccgtcatcg
     6301 aaaaatcacg ctaccgcctc aaagccctgc cggacaacac catgggcttc cagtcgcaag
     6361 gtttcacatt ccccgccgga cgcgatttcg acggcgaaaa gctgaccaac tttttcaacg
     6421 acctgcccaa aatgaccgaa ggactcgtcc gcgccaaagg cgtgtttcaa gtattgggaa
     6481 cgtgggtgtg gctcaactgg gtagacggac agtggggcgc gaaccaagtc tcatggcggc
     6541 gcgattcgcg ttttgaattg attgccaaat cgtttgatgc ggatttaatc gaacaaaaac
     6601 ttaaagatgc attggaatag cgttaacgcg ctttcagacg gcatatgaaa tgaaaatgcc
     6661 gtctgaaggt ctgaggagga tgggatgaaa cccaaattta aaaccgtttt aaccgcgctg
     6721 cttttggcgg tttccctgcc gtctatggcg gcaacccatg ttttgatgga aaccgatatg
     6781 ggcaatatcc gtttggtttt ggacgagtcc aaagccccca aaaccgttgc taatttcgtg
     6841 cgctatgccc gaaaaggctt ttacgacgac accgtttttc accgcgttat cgacggtttc
     6901 gttatccaag gcggcggatt taccgaagac ttggtacaaa aggcaaccga taaagccgtt
     6961 gccaacgaat ccggcaacgg cttgaaaaac accgccggca ccatcgccat ggcgcggacg
     7021 gcagaccccg attccgccac cagccaattc tttatcaatc tcgcggacaa cgcttcgctc
     7081 gactacaaaa acggacaata cggctatacc gttttcggca gggtcgaaag cggaatggac
     7141 acagtttcca aaatcgcccg cgtcaaaacc gccacgcgcg gcttttatca aaatgtaccc
     7201 gtacagcccg tcaaaatccg tcgcgttgtt gtcggacagt aacacgcaga cagacgttca
     7261 gacggcgtcg cccgtttcac aaaaaacgcc gtctgaagtg aaaaaatatt t
//
LOCUS       DBBZXW010000096         7304 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.096, whole genome shotgun sequence.
ACCESSION   DBBZXW010000096 DBBZXW010000000
VERSION     DBBZXW010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7304
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.096"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..99
                     /locus_tag="ACJJD2_001735"
                     /pseudo
     CDS             1..99
                     /locus_tag="ACJJD2_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(120..1034)
                     /locus_tag="ACJJD2_001736"
     CDS             complement(120..1034)
                     /locus_tag="ACJJD2_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7580227.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1302..2771
                     /locus_tag="ACJJD2_001737"
     CDS             1302..2771
                     /locus_tag="ACJJD2_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HGG7580228.1"
                     /translation="MDKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3023..3394
                     /locus_tag="ACJJD2_001738"
     CDS             3023..3394
                     /locus_tag="ACJJD2_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580229.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLASSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3467..4876
                     /gene="thrC"
                     /locus_tag="ACJJD2_001739"
     CDS             3467..4876
                     /gene="thrC"
                     /locus_tag="ACJJD2_001739"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HGG7580230.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGSAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDENIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFNATSSNDETVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPA
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGEMVVCLETALAAKFDATIREAVGDAAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4922..5716
                     /locus_tag="ACJJD2_001740"
     CDS             4922..5716
                     /locus_tag="ACJJD2_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580231.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSAGIAVPELLAVRK
                     NALMFGNLEGIPLDAQIRQEAEAGKSDAWLAGLEAIARVHKKQQFLSQAFARNMMWDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5904..6680
                     /locus_tag="ACJJD2_001741"
     CDS             5904..6680
                     /locus_tag="ACJJD2_001741"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HGG7580232.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            6756..6862
                     /locus_tag="ACJJD2_001742"
                     /pseudo
     CDS             6756..6862
                     /locus_tag="ACJJD2_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(6933..7076)
                     /locus_tag="ACJJD2_001743"
     CDS             complement(6933..7076)
                     /locus_tag="ACJJD2_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580233.1"
                     /translation="MENNKVKSDYAAKQESLGKVDENKNETMKIPPQVGTHMLGFSFI
                     FKC"
BASE COUNT         1789 a         1804 c         1910 g         1801 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggtg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agtttttcgg atgatgatta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtga cggcttcctt tcggtggccc gaacgcagcc catatcaaaa agaaaagtca
     1261 tgcgcccctt ttgcgaggcg cgatatataa ggaggaagat tatggacaaa cataatggga
     1321 cttatcggga tttgcaccgt ccggcttcgg aatttgcgac gcgggacgaa tatttggaac
     1381 atgaattgca gattatgcaa ccaaaacgct ggcggcccaa cctgcccttt cgcgattacc
     1441 gcttcgagtg ggaggatttg attcctgcga tggcgggaac gattggaaaa gtggtgatgg
     1501 tgggggcggt ggcggcggcg tttgccgcac ctttggggct gcctgacagc tttgtactgg
     1561 aaaatgtgcg ctatgagctt ttaatcgccg ccgcgtttat cttattggta tcgggctttt
     1621 ttctgcccgg cgccaacctg cccggtacgc acgggccgct gattccgatg attcccatcg
     1681 ttgtgtcggc aggcgggcat cctttggcgt tcggcatttc gattgcggtt ttaggtctgc
     1741 tgatggcttt atttcgcggc ggcagtatta tggcgaagct gacaagcaac ggcgtatgcg
     1801 gcggattatt actctatttg ggctttatcg gcacgacggg gcaggtaaaa aaattgtttt
     1861 cgtgggcagg cggttttaat atgccctaca tcgcttttac cgtcattatt gtaacgattg
     1921 tgatgtacgc tttgttggag cattggaaaa aacgctggtt agccgtgcct ttgggatgct
     1981 tgattgccgg tgtggtggca tttgcattgg gtgcgccgtt tgagtttcac accgcccccg
     2041 gcctgcctcc aatgagtcct gcttattggt ggggtgaaaa cagcggctgg catctggggt
     2101 tgccgacggc agaaagtttt ttggttgtct ttccatttgc ggtattggct gttgcaatgt
     2161 ggtcgcccga ttttttagga catcaagtgt tccaaaaaat cagctatccg gaaaaaaccg
     2221 ataaggtatt gatgaatata gacgacacca tgacaagttg ttctgtccgt caagcagtgg
     2281 gttctatttt agggggtgca aattttacct cttcttgggg aacttatatc gtaccggcat
     2341 cgattgccaa acgccccatt ccgggcggtg cggttttaac ggcggtttta tgtattatcg
     2401 ccgggttatg gggctatccg atggacttgg cgatttggca gccggtattg agcgtagcct
     2461 tggtcgtagg cgtatactta ccgcttttgg aagcgggcat ggaaatgacg cgcaaaggca
     2521 aaaccaccca atccgccgcc atcgtggtgt tctcttccgc cttggtcaat ccggttttcg
     2581 gctgggcgtt gacgatgctg ttggataatt tgggcttaat cggctgcaaa gagcgcagtg
     2641 cgcaattagg tttcgccgga cgcgtgttga tacccgcagt aggtttcttg atcttgtgtg
     2701 tggcgatggg tgcggtcggg atgctgcccg gtatcccgcc gtttttggaa cacttcaaat
     2761 ctttgggcta ggctgaaatc ggaaatgccg tctgaaccgc tttcagacgg catttttgca
     2821 aacaggcaaa atgacggcgg cgggattttt tattttcccg attgaagtat aatgttgccg
     2881 ggcttcaacc ggatattcaa aacggtttgt tccaacactc ggaacggcgc ataaaacgcc
     2941 gcccttcgcg ttatcccgaa cggggcggct aatcagattc tatcgccata aaaggcgggg
     3001 tttcaaccga aaaggaattg agatgaataa aaccttgtct attttgccgg tggcaatctt
     3061 actcggcggc tgcgccgccg gaggcggtaa cacattcggc agcttagacg gtggcacagg
     3121 catgggcggc agcatcgtca aaatggcggt tgggagccaa tgccgtgcgg aattggacaa
     3181 acgcagcgaa tggcgtttga ccgcgctggc gatgagtgcc gaaaaacagg cggagtggga
     3241 aaacaagatt tgcgcttgcg tcgcccaaga agcacccgaa cggatgaccg gcaacgatgt
     3301 gatgcagatg ctggcttcgt ccacgcgcaa tcaggcactt gccgccctga ccgccaaaac
     3361 ggtttccgcc tgcttcaaac acctgtaccg ctaaccttct tcagacggca tgaggcagat
     3421 gccgtctgaa gccgttttcc tgcaatttcg acagacgaga aaaatcatga aatacatcag
     3481 cacgcgcggc gaaaccgcac acaaaccgtt cagcgaagtt ttattgatgg ggcttgcccc
     3541 cgacggcggt ctgatgctgc cggaacatta tccgcaaatc gggcgcgaaa ccttggacaa
     3601 atggcgcggt tcggcttatc ccgaattggc gtttgaaatt atgcgcctgt tcgttacgga
     3661 tattccggag gacgatttgc gcgacattct gaaccgtact tacacggaag cggcgttcgg
     3721 tactaaggaa atcacccccg tccgcacgct ttcagacggc atcaaaatcc aagccttgtc
     3781 caacggcccg acgctggcgt tcaaagatat ggcaatgcag tttttgggca atgcgtttga
     3841 atatgtttta aacaaagaag gcaaaaaact caatatcttg ggcgcgacca gcggcgatac
     3901 gggttcggct gcggaatatg ccttgcgcgg caaaaagggc gtgaacgtat ttatgttgtc
     3961 gcccgacggt aaaatgagcg cgttccaacg cgcgcaaatg tacagcctgc aagacgagaa
     4021 tatccacaat atcgccgtga agggaatgtt tgacgactgt caggatattg tgaaggcggt
     4081 gcagaacgat gccgcgttca aggaaaaata ccatatcggt acggtcaact cgatcaactg
     4141 gggacgcatc gtcgcgcaag tggtttatta ctttgcaggc tatttcaacg ccacttcaag
     4201 caatgacgaa accgtcagct tctgcgtacc gagcggcaac ttcggcaatg tttgcgcggg
     4261 acacattgcc aaacaaatgg gcctgcctat ccgccgcctg attgtcgcga ccaatgaaaa
     4321 cgatgtgttg gacgagtttt tcaaaaccgg tgcataccgc ccgcgcaaca gcgcgcatac
     4381 ttatgtaacc tccagcccgt ctatggacat ttccaaagcg tccaacttcg agcgtttcgt
     4441 gttcgacctg atggatcgcg atcctgcgga aatcaatacg ctgtgggcgg aagtggctgc
     4501 aggcaaaggc tttgacctgc gatttgcctt ggacaaagtc ggtggcaaat acggttttac
     4561 ctctggcaaa tccacccacg ccgaccgcct cgccaccatc aagcaggttt acgagcaaga
     4621 ccaagaactc atcgacccgc acactgccga cggcgtaaaa gtcgcccgcg aagtgcgcga
     4681 agaaggtgaa atggtggttt gtttggaaac cgcgttggcg gcgaaattcg atgcgaccat
     4741 acgcgaagcc gtcggcgatg ccgccattcc gcgccctgcc gcgctggaag gtttggaaaa
     4801 cctgccgcag cgcgtgcaaa ccgtgccgaa cagtgcggat gcggtaaaag gcatcatcga
     4861 acaaaccctt gcctgatatt ccgtacaggg gcattccgtc cgaacttaag attgaaagaa
     4921 aatgacctta cctatgcagg aaacccgttt ttccatactg ctagacgaat tggcggcaaa
     4981 acaggaggca gccatcgccc cccacctgct tgccgacgga accaaggtat ggatacgcaa
     5041 agcaggcagg cacaatgcac gatggcgtta cgcgctgctc ggtatggttg cccgatattt
     5101 gaaactgggg gtgttgaagc cggttcccag cctcggcggc gagcctgcca ttgcaaccga
     5161 atcaaaacgc ctgtacgaat tgcgctcggc ggggatagcc gttcccgaat tgctcgccgt
     5221 caggaaaaat gcccttatgt tcggcaattt ggaaggcatc ccgctcgatg cgcaaatccg
     5281 ccaagaagcc gaggctggaa agtcggacgc ttggcttgcc ggtttggaag ccattgcacg
     5341 cgtgcataaa aaacagcagt tcctcagtca ggcgtttgca cgaaatatga tgtgggacgg
     5401 aaaaaacatc agctttttgg attttgaaga cgatccttcc gaagtcctga ccatagcgca
     5461 atgccaagcc cgcgattggc tctgctacat tcattctacc gcgctaatat tgaaaaacgg
     5521 cggactgctg gaagctgctg cggaaaaatg gggcggcgta ttgtcggatc agcctgccga
     5581 aatacaaaag ctgattgccg ccaccgtcaa accgatcctc ccgatacgca ggctggaaca
     5641 cccccgctgg ggacgggacg cgctcaggct ggcagcctcg atttccctga tttcccttgc
     5701 cgatatgccg ccataagccg ccgcccgccc cacgatgccg tctgaagccc ttcagacggc
     5761 atataaccaa cgcgcatcaa gcattgtcgc aaccatccgt ttcgtttaga attttgactt
     5821 tatcccgaat tgggcagata ttctcattct gacacacgtc ccaaataaac actccccatt
     5881 tcttttaccg acaggaaacc caaatggcag cattcaatac ccaaaaagta ttgtccgtac
     5941 accactggac agacgcatat tttaccttta cctgcacccg cgacgaatcg ttgcgctttg
     6001 aaaacggcca attcgttatg gtcgggctga tggtggacgg caagccactg atgcgcgcat
     6061 acagcgtcgc ctccgccaac tgggaagaac acctcgaatt tttcagcatt aaagtccaag
     6121 acggcccgct gaccagccgc ctgcaacacc tcaaagtcgg cgacgacgtg ttaatcagca
     6181 aaaaaccgac cggaaccttg gttgccggcg acctgaatcc gggcaaacac ctttacctgt
     6241 tgagcaccgg taccggcatc gcccctttct tgagcatcac caaagatccc gaaatttacg
     6301 aacagtttga aaaaatcatc ctcgtacacg gcgtgcgcta caaaaaagat ttggcgtact
     6361 acgaccgctt taccaaagaa ttgcccgaac acgaatacct cggtgacttg gttaaagaaa
     6421 aactgattta ctacccgatt gtttcgcgcg aagaattcga acaccacggc cgcctgaccg
     6481 acctgatggt gagcggcaaa ctgtttgaag acatcggcct gcccaaaatt aatcctcaag
     6541 acgaccgcgc catgctgtgc ggcagccccg cgatgctgaa agacacctgc aaagttttgg
     6601 acgatttcgg actgaccgtc tctccgaaaa caggcgtacg cggcgattac ctgattgagc
     6661 gcgcatttgt ggaccaataa tctgcttgaa aatgccgtct gaacggcatc tgcgataaaa
     6721 aaccccgaat cctgccaatc aggattcggg gtttttatag tgaattaaat ttaaattagg
     6781 acaaggcggc gagccgcaga cagtacaaat agtacggcaa ggcgagccaa cactgtaccg
     6841 gtttaaattt aattcactat atagtgggta aaaattagaa atgcacattt ccgtcattca
     6901 cgcgcaagtg ggaatccaga cctatccgtt aattagcatt tgaaaataaa agaaaaacca
     6961 agcatatggg ttcccacttg cgggggaatc ttcatcgtct catttttgtt ttcatcaact
     7021 tttcctaaac tttcctgttt ggctgcataa tcagacttga ctttgttatt ttccatattg
     7081 agcttctctt aatttgaaaa aattaacata aacatttaaa aataaaacaa aattatataa
     7141 taaaaaaaat aatgagaata taaaggataa aaagagagtt aagttattta atcggacttg
     7201 ttctctataa atcataagac accaaataag ccataataaa tttagtaaat aaaaactgct
     7261 tatacccaac tttcttttct tggaacctat tattatttca actc
//
LOCUS       DBBZXW010000097         7224 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.097, whole genome shotgun sequence.
ACCESSION   DBBZXW010000097 DBBZXW010000000
VERSION     DBBZXW010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7224
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.097"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(16..771)
                     /locus_tag="ACJJD2_001744"
     CDS             complement(16..771)
                     /locus_tag="ACJJD2_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HGG7580234.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPKWQKGKVSSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNADAQMFCSGASVGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(951..2126)
                     /gene="nirK"
                     /locus_tag="ACJJD2_001745"
     CDS             complement(951..2126)
                     /gene="nirK"
                     /locus_tag="ACJJD2_001745"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HGG7580235.1"
                     /translation="MKRQTLAALIASVFALAACGEQAAKPAETPAATASAEAPAASNS
                     QAAAETPSSELPVIDAIVTHAPEVPPPTDRDHPAKVRVKMETVEKTMKMDDGVEYHYW
                     TFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTS
                     TFSFKALQAGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTK
                     GKKGAQGLQPFDMDKAIAEQPEYVVFNGHVGSIAGDNALKAKAGETIRMYVGNGGPNL
                     VSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFR
                     AFNKGALGQLKVEGEENPEIMTQKLSDTAYAGNGAASAASAPAASAPAASASEKSVY"
     gene            2524..4779
                     /locus_tag="ACJJD2_001746"
     CDS             2524..4779
                     /locus_tag="ACJJD2_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HGG7580236.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQTTGGMEVGSILGHGAYQAPDWTADWLHRELVAWLDLTAQE
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRVKEDGSVVVSETRVKAIESILPYYHGVY
                     SDDPKFQTTREHFAMKNNTLPSQEAREKLFNFFFWTSWSASTNRPDENFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNVQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            4958..5491
                     /locus_tag="ACJJD2_001747"
     CDS             4958..5491
                     /locus_tag="ACJJD2_001747"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HGG7580237.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5554..6738)
                     /locus_tag="ACJJD2_001748"
     CDS             complement(5554..6738)
                     /locus_tag="ACJJD2_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HGG7580238.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRVADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6778..7182)
                     /locus_tag="ACJJD2_001749"
     CDS             complement(6778..7182)
                     /locus_tag="ACJJD2_001749"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HGG7580239.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1691 a         1719 c         1957 g         1857 t
ORIGIN      
        1 ctataattga aggggttatc ggcttgtgca acggaagccc aagttgtgca agacgtattt
       61 ggattgtagg ctggtgcgga tgccgtagcg gaggaatgcg gcatagttgg acgagtcgct
      121 cgacccgaca gatgcgccgc tgcaaaacat ttgcgcatcg gcattgccgg aagaaagcag
      181 gctgctgttg aaatcttccg tccattccca aatcagaccg tgcatatcgt aaacgcccca
      241 gtagttcggg cggcctttgc cgacatcgtg caggccttta cgaccgccat ccgcatacca
      301 atcgagaata gtgcggttgt agccgggttc gtttgagccg tttttctgcg tggcggaagc
      361 aagtccggca aattcccatt cgtcaatggt cggcaggcgt ttgccttgtg cagcgcaata
      421 ggcgttggcg gcaaaccagg aaacattggt taccggttgt tttaattcgc ccgccttcgg
      481 cgcatagctg cggctgccgt ttttcatcca atgcttcagg taagcaggct ctgcctgttt
      541 ggaactgacc ttgccctttt gccatttggg gtgactgttg acaaattcgg caaactcggc
      601 attggtaacg ggatatttat ccagtttgaa cggtttgact ttaatcaggc cggtatcttt
      661 tttcagataa agcgggcggt agctgccgcc ttcgatttga accatttcgg cagccgccgc
      721 ttgggtgccg gcgagagccg cacagagaaa gagtaaccgg gcaaacttca tattatgcct
      781 cctgacaggc ggttaacatt gatttttcag acggcatttt aaacgagaac cgcgaatgcc
      841 gtctgaagaa tcaagcttcc aaagtaaaaa ggttgatgat taaaaaacca ctgccgtgcg
      901 taatgaagta cggcggcagt ggtttgttcc gctaatgacg gatatccgat ttagtaaacg
      961 cttttttcgg atgcagaggc tgccggagcg gaagctgcgg gagcggaagc tgcggaagcc
     1021 gcaccgttgc cggcgtaagc ggtatcactc agtttttgag tcataatttc agggttttcc
     1081 tcaccctcta ctttcaattg acccaacgcg cctttgttga atgcgcggaa gatagagtgg
     1141 tcgaccaagg tgtagctgcc tggaatgtcg actttgaatt cgacaatggc ggaaccgccg
     1201 gcaggaacaa ttgtactttg tacgttttcg ttaatcagtt taccaccttc aacatatact
     1261 ttgtcgaaga tttcgccgat aacgtggaaa gaagatacca agttaggacc accgttacca
     1321 acgtacatac gaatagtttc accagcttta gctttcagag cgttatcgcc ggcgatagag
     1381 cctacgtgac cgttgaatac aacgtattca ggttgttcag caatcgcttt atccatatcg
     1441 aaaggttgca ggccttgagc acctttttta cctttagtat agaagtcacc ttgtacgatg
     1501 tagaactctt tgtccacttt aggcagacct tctttaggtt caaccaagat caaaccgtac
     1561 ataccgttgg cgatgtgcat acctacagga gcaacggcac agtggtagat gtacaaacca
     1621 gcttgcagcg ctttgaagct gaatgtggaa gtacggcccg gagcggtaaa ggttgcagcc
     1681 gcgccgccgc cctgaccggt agccgcgtgg aagtcgacgt tatggggaac ggtagaagaa
     1741 ggattgttgg agaattccac ttcaaccgta tcgccttcgc gtacgcggat catgcggccc
     1801 ggaacatcgc cgtcaaatgt ccagtaatgg tattccacgc cgtcgtccat tttcatggtt
     1861 ttttcaacgg tttccatttt aacgcgtact ttagccggat ggtcgcgatc agttggaggt
     1921 ggaacttccg gagcgtgagt tacgatagca tcgattacag gcagttctga agaaggagtt
     1981 tctgcagcag cttgtgagtt ggaagcggca ggagcttcag cagaagcggt agcagctgga
     2041 gtttcagcag gtttagcagc ttgctcgccg catgcggcca gtgcaaatac agaagcgata
     2101 agtgcggcta aggtttggcg tttcatgttt aaagtttcct tatagtaaga aaagttaaga
     2161 atcctgatag gatggtttga aattttgtat gattatgtag gcgcttgttt ggtcatattt
     2221 tgatgtaaat caaattattc agggaatatg aatcttttac tacctaaata ctcctttaga
     2281 agtataaaaa aatacatcga aaagtttaat tttgtgtgaa aatgttagcg aaaatttaac
     2341 acaaatacga taaaggaggg tttgtataag aaaatgggaa tcaatatcat ataagttaat
     2401 ggttttaaag gaatattttt gacaaaatat ttctttactt gttaaaccgt gatacaatct
     2461 ttaacattca tatttgatga attaataccc aaccactttt accaaaatta aggagtactt
     2521 aaaatgggac agtacaagaa gctttggtac ttgctgtttg ccgttctggc ggtatgcttt
     2581 accattcttg gctatatggg cagcgaggtt tacaaaaaag ccccgcctta ccccgaacag
     2641 gtcgtttccg catccggcaa ggtcttgatg acgaaagacg atattttggc aggtcagtct
     2701 gcatggcaga ctaccggcgg tatggaggtc ggttcgattc tgggccacgg cgcatatcag
     2761 gctccggact ggacggcgga ctggctgcat cgtgagttgg ttgcctggtt ggatctgact
     2821 gcgcaagaaa cttacggtaa aaaatttgac gaagtttctc ctgaagaaca agctgttctg
     2881 aaaacacgtt tggctgacga ataccgcaac caaagccgtg ttaaggaaga tggttctgtt
     2941 gttgtcagcg aaacccgcgt gaaagccatc gaaagcatcc tgccttacta ccacggtgtg
     3001 tacagcgacg atcctaagtt ccaaaccact cgcgaacact ttgcaatgaa aaacaataca
     3061 ttgccaagcc aagaagcgcg tgaaaaactg ttcaacttct tcttctggac ttcttggtct
     3121 gcttcgacca accgtcctga cgagaatttt acttacacca acaactggcc gcacgaacct
     3181 ttgatcaaca acgtaccgac cactgaaaac tatatgtggt cattcaccag cgttgttctt
     3241 ctgctgatgg gcatcggttt gctgatgtgg ggttattcct tcctgaccaa acacgaagaa
     3301 gtggaagtgc cgtctgaaga cccgatttcc aaaatccaac tgaccccttc gcaaaaagca
     3361 ttgggcaaat acgtcttcct gacggtcgcc ctgtttgtgg tacaagtatt gctgggcggc
     3421 ctgaccgcac actacaccgt cgaaggccag ggtttctacg gtatcgacga ggcgttgggc
     3481 tttgaaatgt ccgactggtt cccctacgcc ctgacccgta cttggcacat ccaatccgct
     3541 atcttctgga ttgcaaccgg ctttttgacg gcaggtttgt tcctcgcgcc gattgtcaac
     3601 ggcggcaaag atcccaagtt ccaacgtgcc ggtgtgaact tcctctatat cgccctcttc
     3661 atcgtggtcg gcggttctta cgcgggcaac ttcttcgcgt tgacgcacat ccttcccccc
     3721 gaatttaatt tctggttcgg acaccaaggt tacgaatacc tcgatttggg tcgtttctgg
     3781 caactcctgc tgatggtcgg actgctgttg tggctgttcc tgatgttgcg ctgcacggtt
     3841 tccgccttca aagaaaaagg cgtggacaaa aacctgctgg caatctttgt cgcttctatg
     3901 gtcggtgtgg gcgtgttcta cgcaccggga ctgttctatg gcgaaaaatc cccgattgcc
     3961 gtaatggaat actggcgttg gtgggtggtt cacctgtggg tggaaggctt ctttgaagta
     4021 tttgccactg ccgccttcgc atttgtcttc tacaatatgg gctttgtccg ccgcagtacc
     4081 gccactgcct ccactttggc cgctgccgcc atctttatgt tgggcggcgt tccgggtacg
     4141 ctgcaccacc tgtacttctc cggctctacc tccgcctcta tggcaatcgg cgcctgcttc
     4201 tccgctttag aagtcgtgcc gctggtgttg ctgggtcgtg aagcatacga gcattggtct
     4261 taccaacacc tgtccgactg ggcgaaacgc ctgcgttggc cgctgatgtg cttcgttgca
     4321 gtcgccttct ggaatatgat cggtgccggc gtattcggct tcctgatcaa tccgccgatt
     4381 tccctgttct atatccaagg tttgaacact tctgccgttc acgcgcacgc cgccttgttc
     4441 ggtgtgtacg gtttcttggc attgggcttc gtattgctgg ttgcccgtta tttgaaaccg
     4501 aacgtgcagt ttgacgacaa actgatgact tggggcttct ggctgctgaa cggcggtttg
     4561 gtgggtatga ttgccatcag cctgttgccg gttggcgtga ttcaggcata cgcctccatc
     4621 acgcacggtc tgtggtatgc gcgtagcgaa gagttcctgc aaatggaaat cttggatact
     4681 ctgcgttggg ttcgtactgc tgctgacttg atcttcatcg gcggtgcaat ctgtgtcgcc
     4741 atccaagcca ctaaaatcgt attcggccgc gacaaataag ttttgcggta tgaaatgagc
     4801 aactgcaccc gttttcgggt gcagtttttt attgcggatt gggacgggaa tggaaaagga
     4861 tgtggatttt ttattttaat cggctataca attgctgctt tcatgccgtc tgaagcacgt
     4921 ttcagatggc atcggtttac atcagataag gataaaaatg ggtatttacg attttcaaat
     4981 gaaagatgca gaaggcaatg cggttgattt gtcaggctat cgcggcaagg ttctgctgat
     5041 tgtcaacacg gcaacgcgtt gcggtctgac cccgcaatac gaggctttgc agaagctgta
     5101 tgcacaatat accgcagaag gcttggagat tttggatttt ccgtgcaacc agttccgcga
     5161 acaggctccc gaaagcagcg gagaaattgc ccaagtgtgt atgatgaagt ttggcacgaa
     5221 gtttaagatt ttcgacaaaa tcgaagtcaa tggagcaaat accgcgccct tgtatgccta
     5281 cctgaaatcc gtcaaaccgc aagataaagg caatcatctg tttaaagatt tcgtgttgaa
     5341 gctcgcagct ttgggagaga agcgcgacga aggcgacatc aaatggaact ttaccaaatt
     5401 cctcgtcaac cgcgacggcg aagtggtcga gcgttttgcg cctagtgtta cgcccgaaga
     5461 aatcgaagcc gatattcggg cattgctgta atctgccgcc gtcttgggaa atgccgtctg
     5521 aaggcttcag acggcatttg tccgtttgcg ggtttattcc gaaatatcgg caacaccgct
     5581 ttcggggaag atgggcaaat ccggcggtgg gagcagggta tccaaagtca gggcggacgc
     5641 atcgagtgtg gggtagcctt caaacgcgac cgaataaccg ctgtttccgt tcatacggat
     5701 tcgggcgtgc gcgcccagag ggaaagtgat tttgtcggca atgtgcccga agggaaagcc
     5761 cgtcagcacg gggattttcg ccgtgcgcga aacatggttg gcaacggcgg aaaaatcata
     5821 agacggatca tagacatctc gaattttttc catacggaaa ttgccgaaca cgatggcgcg
     5881 ctgtttcttc aaaatacccg aaagatacag cgtattgagc atacgttcga tgcggtaggg
     5941 ctgttcgccg acatcttcga ggaacaaaat gccgccgtcg atgtcgggca tataaggcgt
     6001 gccggcgagc gaggcgagga cgcttaagtt gccgccccac aatatgcctt cggtttcgac
     6061 atcggcgcgt tggatataag gaacatcaac ggtcaggcgg ttttgggttg cacccttgat
     6121 aaaggcatcc atcgtaaacg caccgggggc gggtttgcca aaatcgctat aagccatcgg
     6181 gccggcaaaa ctcatcatat tgccttttgc caacaatgcc agctggacgg cgcatacgtc
     6241 gctgaatccg aaaaacagcg tgccgtgttc gcgcatcctt gcgccgagcg aagcaaaatc
     6301 gatatgcggc agaatccgcg ccgcaccgta accgccgcgc aagcccatca gcactttagg
     6361 cgtggcgacg cggccggaag cgacctcttg gaaatcggcg acacgttgtg cgtccgtacc
     6421 agcaaaccgt tggaagcggc ggctgcccgc ctgttggttg gttacggtaa aaccggcatt
     6481 gtaaaggcgg gttaaggctg tgttgacgcg gttggtgtct tcggcaaagc ctgacgaagc
     6541 gacaacgcgc agaaggttgc cgtccgaact ttgacggcgt ggcgtttgga gaggcacggt
     6601 tcgggctttc acaacagaat gggaagaggg aaggggcgga acggatgtgg cggatgtgcc
     6661 gcaagcctga agcagtcccg cgccggcggc ggcggtgcag gttttcagaa aacgacggcg
     6721 ggaggtcggt tcggtcataa tttccctttc atacggtttc agacggcatc ggcgggctta
     6781 aagcagcttt ttaagctgtt ccgtccaatc ttgcggcagg gtcataccgt gttttcggac
     6841 ggggtttgcc caaatcggcg cagggaagga cgcatcgttt tcaaagcggg cgataatatg
     6901 ccaatgcagg tgcggcacga cattgcccaa gctggcgagg ttaatcttgg caggttgaaa
     6961 cacttggcgc atagcggctt cgactttgta caccatttcc atcaattcgc cgcgttccgc
     7021 tgccgaaagg tcggtcattt cggcaatatg cttacgccaa atgacgcggc agaatgcagg
     7081 cgaaccgctg tcgttatgga cggcgatgac gcgcagcttg ggggtttgca gcaaaatatc
     7141 ttcatcttgt gccgtgcaga tggggcaggg ttgggcggtc atttttcctt attcctgaaa
     7201 gtgtttaaaa aacggtagga taat
//
LOCUS       DBBZXW010000098         7147 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.098, whole genome shotgun sequence.
ACCESSION   DBBZXW010000098 DBBZXW010000000
VERSION     DBBZXW010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7147
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.098"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..306
                     /locus_tag="ACJJD2_001750"
                     /pseudo
     CDS             1..306
                     /locus_tag="ACJJD2_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684347.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(363..1421)
                     /gene="trpD"
                     /locus_tag="ACJJD2_001751"
     CDS             complement(363..1421)
                     /gene="trpD"
                     /locus_tag="ACJJD2_001751"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HGG7580240.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFAAKVPLEDAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQIAQSIRQTGIGFMFAPNHHS
                     AMRYVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(1485..2075)
                     /locus_tag="ACJJD2_001752"
     CDS             complement(1485..2075)
                     /locus_tag="ACJJD2_001752"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HGG7580241.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIERGTLPECLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            2496..4772
                     /gene="znuD"
                     /locus_tag="ACJJD2_001753"
                     /gene_synonym="tdfJ"
     CDS             2496..4772
                     /gene="znuD"
                     /locus_tag="ACJJD2_001753"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HGG7580242.1"
                     /translation="MAQITLKPIVLSILLISTPLLVLAHETEQSVDLETVSVVGKSRP
                     RATSGLLHASTSSDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVTD
                     GKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGNNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVVYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGSHDGDGAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPLPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVQQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNHF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYIKTDNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            complement(5433..6230)
                     /locus_tag="ACJJD2_001754"
     CDS             complement(5433..6230)
                     /locus_tag="ACJJD2_001754"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HGG7580243.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTEVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLAAP
                     QIESEPESEPALQTAPVETAATPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            6385..>7147
                     /locus_tag="ACJJD2_001755"
     CDS             6385..>7147
                     /locus_tag="ACJJD2_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HGG7580244.1"
                     /translation="MCNHHPRHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVITGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAIEMDSGEEH"
BASE COUNT         1827 a         1994 c         1666 g         1660 t
ORIGIN      
        1 ttataccgtc gttgttccta atgcgcaatc agcgacattg ttgccaatta tccgaaagaa
       61 agttaagcct gatggcattg tatacacgga tacctttcgt agttatgatg tgcttgatat
      121 tagtgaattt agccatttac gtaagtttaa cggcattccc aaagagcatt tggggctgca
      181 tttaaagaaa tgccaatggc attttaaata gaatctcaaa ttcagatttt aagacaatta
      241 gttaatggga atttggtctg gttatctagt acagccccaa gtttttatat aaaaacagtt
      301 tggtaagttc tcttcgtgaa gtgcttatgt tttgccacaa aagttccata atcatggcgg
      361 catcacccaa gctccatctt tccaagaaaa tggcatcttt gttgtggttg aaaaccgaca
      421 aactcctctt ttttcgattt ggccctgcct gaatcgatgg cttcccgtgc ggcagatatg
      481 ccgtctgaaa gcgaagcagc gacatttccg gcatacaggg cggcggcggt gttgagcaat
      541 acgatatcgc gcgcagcccc ttctcttcct tccagcacct cattcatttt caacaaagat
      601 tcctgagtat tggcaacttt gatttcatcc aaattgcggc gggtttcgat accgaaatct
      661 tctgggcgga tgtcgtattc gctgattttt ccgtctttga gctcggcaac gcgtgttttg
      721 cccgtcagtg taatttcatc caaaccgccc tccccgcaaa caaccaaaac atgcttggag
      781 ccgagctgtt gcaatactct ggaaaggatg ccgcacaaat cggtgtggaa cacgcccaaa
      841 agctggttcg gcgcgcccgc aggattcgtt aacggaccca atatgttgaa aatacttcgg
      901 aaaccgagcg aacgtcgtac cggggcaaca tagcgcatgg cactgtggtg attgggggcg
      961 aacataaacc cgatgccggt ctgcctgata ctttgggcaa tctgttcggg agtcagattg
     1021 aggtttgcgc ccatttgctc catcacgtca gccgcaccgc tggaggaaga gaccgaccgg
     1081 cctccgtgtt tggcaacctt cgcgcctgcc gctgcggcaa caaacatcga agtcgtcgaa
     1141 atattgaagg ttttcgcgcc atccccgccc gtaccgacga tatcgaccag cccttccgca
     1201 tcctccagcg gcacttttgc cgcaaactcg cgcatcacgg cggcggcagc ggtaatctcg
     1261 gaaacggttt caaccttgat acgcaagccg gtcaaaatcg ccgcaatttg ttcgggcggc
     1321 acttttccgc tcataatctg acgcatcaag tcggtcattt catcgtaaaa caactcgtta
     1381 ttgctgatta atcgttcgat ggcctgttgc ggtgtaatca ttttttgtcc tccgttcaat
     1441 attcggacga aaatgccgtc tgaagggctt cagacggcat cacgtcagat tttttgcggt
     1501 ttgaagtttt gaaattcgat taaaaaattg tttaacatat catgtccgtg ttcggtcaag
     1561 agggcttcag ggtggaattg taccccctca acggcatatt ccttatggcg cacgcccata
     1621 atctcgccgt cttccgtcca tgccgtgatt tccaaacatt cgggcagcgt gccgcgttcg
     1681 ataacgaggc tgtgataacg cgtacaggta accggattgg gcaaaccctt aaacatcccc
     1741 ttgcccgaat gggacacggg cgacacctta ccgtgcatca gcgttttggc gcggactatc
     1801 ctgccgccga acgcctcgcc tatcgtctga tgcccgaggc acacacccat aatcggcagc
     1861 ctgccggcga aatggcgcat cgccgccacg gaaatccccg cttctttggg cgaacacgga
     1921 ccgggtccga taacgagata ttgcggattc aatgcctcga tttcctccaa cgtaatatca
     1981 tcgttgcggc gcacggcaac ttcctgcccc aattctgcga aatactggac gatgttgtaa
     2041 gtaaaactgt cgtaattgtc gataaacaaa agcattttgt gattaaccta ttgatttata
     2101 atttatttat tattaactgc attttcgata cccccattca taccccttat atcttagcgt
     2161 gcccgatgcg ccctcgtgaa tctggcgcag agcctcgcgt tctgacgagt acgccatttt
     2221 gccacctttt cgagcgttcg ggaacgtgcc gtttttatgc actcataaat tttggttatc
     2281 ccgcagccga acataatgga caaacacaac ggaatccgca tcaacatcaa ccgcgccccc
     2341 gaatgacgga ggatacaaat ggacaccgcc tgatgccgca accgtgtcat ttgaaaaact
     2401 tttgcctatg ccctctgagt gttctcaaaa tcttatgata taaaaaatgc aatgttatat
     2461 aataacaaac ttttaaaatg cgaagagaag ccaaaatggc acaaattaca ctcaaaccca
     2521 ttgttttatc aattctttta atcagcacac ccctcctcgt cctagcgcat gaaaccgagc
     2581 agtcggtgga cttggaaacg gtcagcgtcg tcggcaaaag ccgtccgcgt gccacttcgg
     2641 ggctgctgca cgcttcgacc tcctccgaca aaatcatctc cggcgatacc ttgcgccaaa
     2701 aagccgtcaa cttgggcgat gctttggacg gcgtaccggg cattcatgcc tcgcaatacg
     2761 gcggcggcgc gtctgctcct gtcattcgcg gtcaaacggg caggcggatt aaagtgttga
     2821 accatcacgg cgaaacaggc gatatggcgg atttttcgcc cgatcacgcc attatggtag
     2881 ataccgcctt gtcgcaacag gtcgaaatcc tgcgcgggcc ggttacgctc ttgtacagct
     2941 cgggcaatgt ggccggtttg gtcgatgtta ccgatggaaa aatccccgaa aaaatgcctg
     3001 aaaacggcgt atcgggcgaa gccggattac gtttgagcag cggcaatttg gaaaaactga
     3061 catccgcagg catcaatatc ggtttgggca acaacttcgt gctacatacc gaaggcttgt
     3121 accgcaaatc aggcgactac gccgtaccgc gttaccgcaa tctgaaacgg ctgcccgaca
     3181 gccacgccga ttcgcaaaca ggcagcatcg ggctgtcttg ggttggcgaa aaaggcttta
     3241 tcggcgtggt gtacagcgac cgcagagacc aatacggcct gcctgcccac agccacgaat
     3301 acgatgattg ccacgccgac atcatttggc aaaagagttt gattaacaaa cgctatttgc
     3361 agctttatcc gcacttgttg accgaagaag acatcgatta cgacaatccg ggtttgagct
     3421 gcggttctca cgacggtgac ggtgcacacg cacacaccca cagcggcaga ccgtggatag
     3481 acctgcgcaa caaacgctac gaactccgtg ccgaatggaa gcagccgctc cccggttttg
     3541 aagccctgcg cgtacacctg aaccgcaacg actaccacca cgacgaaaaa gcaggcgatg
     3601 cagtagaaaa cttcttcaac aacaaaacac acaacgcccg tatcgagttg cgccaccaac
     3661 ccataggccg tctgaaaggc agctggggcg tgcaatattt gggacaaaaa tccagcgcac
     3721 tttccgccat tcccgaaacc gtccaacaac cgatgttgat tgacaacaat gtgcgccatt
     3781 acagcttttt cggtgtagaa caggcaaact gggacaactt cacgcttgaa ggcggcgtac
     3841 gcgtggaaaa acaaaaagcc tccatccgat acgacaaagc attgattgat cgggaaaact
     3901 actacaacca gcccctaccc gatctcggcg cgcaccgcca aaccgcccgc tcattcgcac
     3961 tttcgggcaa ctggtatttc acgccgcacc acaaactcag cctgaccgcc tcccatcagg
     4021 aacgcctacc gtcaacgcaa gagctgtacg cacacggcaa acacgtcgcc accaacactt
     4081 ttgaagtcgg caacaaacac ctcaacaaag agcgttccaa caacatcgaa ctcgcgctgg
     4141 gctacgaagg cgaccgctgg caatacaatc tggcactcta ccgcaaccat ttcggcaact
     4201 acatttacgc ccaaacctta aacgacggac gcggccccaa atccatcgaa gacgacagcg
     4261 aaatgaagct cgtacgctac aaccaatccg gtgcggactt ctacggcgca gaaggcgaaa
     4321 tctacttcaa accgacaccg cgctaccgca tcggcgtttc cggcgactat gtacgaggcc
     4381 gtctgaaaaa cctgccttcc ctacccggca gggaagatgc ctacggcaac cgtcctttca
     4441 tcgcacagga cgaccaaaat gccccccgtg ttccggctgc gcgcctcggc ttccacctga
     4501 aagcctcgct gaccgaccgt atcgatgcca atttggacta ctaccgcgtg ttcgcccaaa
     4561 acaaactcgc ccgctacgaa acgcgcacgc ccggacacca tatgctcaac ctcggcgcaa
     4621 actaccgccg caatacgcgc tatggcgagt ggaattggta catcaaaacc gacaacctgc
     4681 tcaaccaatc cgtttacgcc cacagcagct tcctctctga tacgccgcaa atgggtcgca
     4741 gctttaccgg cggcgtgaac gtgaagtttt aaaactagat aggcaaacaa aaaaggtttt
     4801 cagacggcat tctgaaaacc ttttttcttt ttaatcaatt tgttaggaaa tatgacaaag
     4861 acaaagaaca aaccactatg ccatcattcc catttttttg tttcatcatt cttgctttca
     4921 cgccgtcatt ctcgcaaaag cagaaaccca tcattcccgc gcaggcggga atccaattca
     4981 ttcggtttca gccgtttccg ataaatcgcc ttagcatttg ggttctagat tcccactttc
     5041 gtgggaatga cggcgtaaag gtttctgttt tttaagtgtt aggtaactaa taagtcgtca
     5101 ttcccgcgca ggcgggaatc caattcgttc ggtttcagcc gtttccgata aatcgcctta
     5161 gcatttgggt tctagattcc cactttcgtg ggaatgaggc ggaaaggttt ctgtttttta
     5221 agttttaggt aactaataag tcgtcattcc cgcgcaggcg ggaatacaat tcgttcggtt
     5281 tctgttattt ctgataaatc accgtaacgt taagttccca gatttccact ttcgtgaaca
     5341 taacggtgtg aacattagca aaaattcaaa aaaccaaact tcctcattcg tgtgaatgat
     5401 ggtactgata ttttctattt cagttcgcaa aattaatctt tcaacacatc ttgcacagcc
     5461 gcctgaatct tagccgccgc tgcctcgatt tgccgttgtt cggcagatgg ggttgccgct
     5521 gtttcaaccg gagcagtttg taaagcaggc tcagattcag gctcggattc gatttgcggc
     5581 gcagccagcg gcaaacgcgc caatacagtg ctgacgccgg ttactttatc gccaatcgcc
     5641 acttgcgcct gcgcatcgac aggcagatac atatccacgc gcgaaccgaa gcgaataaag
     5701 ccatagcgtt cgccgcggga cagtttcgca cctgcttggg tgtagcacaa aatacggcgc
     5761 gccaccaaac cggccacttg aacaaaagta atttcacgac cagaagccgt cgtcgccaaa
     5821 accgcgttgc gttcgttttc cgtgctggct ttgtccaaat ccgcatttac gaatttgcct
     5881 ttgttataga ccacttccgt taccgtacaa tcggcaggcg atttttgcga atgcacgttg
     5941 aacacgttca taaaaatact gattttcaaa gcatcgacat cacgatacgg atcgcgtgcg
     6001 cgctcgacca ccacaatgcg gccgtcaaca gggctcaaca ccgcttcagg attttgcgga
     6061 atctcacgcg cagggtcgcg gaaaaactgc aatgcaaata cggtaaacac ccaaaacggc
     6121 aaagaccacc agccgcagca catcgacacc agcaggctca aagccaaacc gccgccgata
     6181 atcggccagc cctcacgggc gataatcggg tgggggtaaa gacggttcat ttgtcatcct
     6241 tctattcaag cgggttaaaa ttgccgccat tataacggaa tccgccgcat tccgccgaca
     6301 aatgccgtct gaacgcggct tcagacagca tccgagaaag tgctacaata tcggttttcc
     6361 tttatttttc aggcggcatc cattatgtgc aaccatcatc cccgacattc gcacgacaac
     6421 gacaccatcc gcatacgcgg cgcacgcacg cataatttga aaaacatcga tttggacatt
     6481 ccgcgccaca agctcgtggt cataacagga ttgtcaggca gcggcaaatc atcgctggca
     6541 tttgacacgc tgtatgccga agggcagcgg cgttatgtcg agagcctttc cgcctatgcc
     6601 cgtcaatttt tacagatgat ggacaaaccc gatgtcgatt tgatcgaagg cctctcgccc
     6661 gcgatttcca tcgagcaaaa atccaccagc cacaatccgc gttccaccgt cggcacggta
     6721 actgaaatcc acgattacct gcgccttttg tacgcccgcg tcggcacgcc gtattgcccc
     6781 gaacacaatc tgccgctatc cagccagacc gtgtcgcaga tggttgatgc cgtgttgaag
     6841 ctgccggaag acacgcgcgt gatgattctg gcgccggcgg tacgcgagcg taaaggtgag
     6901 tttgtcgatt tctttgccga cttgcaggcg cagggctttg cacgggtgcg agtggacggc
     6961 gaggtctatc agcttgacga agtgccgaag ctggaaaaaa acatcaagca caatatcgat
     7021 gtcgtcatcg accgcgtgaa agtaaaagct gacatcaagc aacggctggc agaaagtttt
     7081 gaaaccgctc tgcgccacgg caacgaacgc gcactggcga tagagatgga cagcggcgaa
     7141 gagcatt
//
LOCUS       DBBZXW010000099         7094 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.099, whole genome shotgun sequence.
ACCESSION   DBBZXW010000099 DBBZXW010000000
VERSION     DBBZXW010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7094
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.099"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            143..1993
                     /gene="ltgA"
                     /locus_tag="ACJJD2_001756"
     CDS             143..1993
                     /gene="ltgA"
                     /locus_tag="ACJJD2_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HGG7580245.1"
                     /translation="MYLPSMKHSLPLLATLVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKS
                     LGARKQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQL
                     TDDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKL
                     YKQAAATGRNFYAVLAGEELGRKIDTRNNVPDADANSVLRMAEDGAIKRALVLFQNSR
                     TAGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTP
                     LEGAVYAETIPFSETRDYVKKVMANAAYYASLFGAPHIPLKQRMGIVPAR"
     gene            2282..2494
                     /gene="rpsU"
                     /locus_tag="ACJJD2_001757"
     CDS             2282..2494
                     /gene="rpsU"
                     /locus_tag="ACJJD2_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HGG7580246.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            2626..3072
                     /locus_tag="ACJJD2_001758"
     CDS             2626..3072
                     /locus_tag="ACJJD2_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HGG7580247.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(3150..3392)
                     /locus_tag="ACJJD2_001759"
     CDS             complement(3150..3392)
                     /locus_tag="ACJJD2_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580248.1"
                     /translation="MPSERNRVSDGILSDGAQTESVYRQNPFRCIETVLPLPIRYWDV
                     IASALECNYGAANQAIERQRQRAAAVAVHERVAKFL"
     gene            complement(3397..3789)
                     /locus_tag="ACJJD2_001760"
     CDS             complement(3397..3789)
                     /locus_tag="ACJJD2_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HGG7580249.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3861..4466)
                     /locus_tag="ACJJD2_001761"
     CDS             complement(3861..4466)
                     /locus_tag="ACJJD2_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HGG7580250.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            complement(4568..6244)
                     /locus_tag="ACJJD2_001762"
     CDS             complement(4568..6244)
                     /locus_tag="ACJJD2_001762"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArnT family glycosyltransferase"
                     /protein_id="HGG7580251.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADSYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPTVHFLNPAAAAFAAAGLV
                     LHGYSLACRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGVVWMLAVLVLLAANPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENILKTTD"
     gene            complement(6405..7019)
                     /locus_tag="ACJJD2_001763"
     CDS             complement(6405..7019)
                     /locus_tag="ACJJD2_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000615741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HGG7580252.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGIYILVENNSFDMLWTVLG"
BASE COUNT         1844 a         1952 c         1883 g         1415 t
ORIGIN      
        1 aatttaatcc actataaatt atgtcggaaa cattccaaag gcggtgcagt ttcggcatat
       61 aattcgggca aacgcctgtt cagacggcat tttgtctttt ccaaccctga ccgttcaggg
      121 ttccgattct taaggaaatc cgatgtacct accctctatg aagcattccc tgccgctgct
      181 ggcgacccta gtgcttgccg cgtgttcttc gacaaacaca ctgccagccg gcaagacccc
      241 ggcagacaat atagaaactg ccgacctttc ggcaagcgtt cccacccgcc ctgccgaacc
      301 ggaaggaaaa acgctggcag attacggcgg ctacccgtcc gcactggatg cagtgaaaca
      361 gaaaaacgat gccgccgtcg ccgcctattt ggaaaacgcc ggcgacagtg cgatggcgga
      421 aaatgtccgc aacgagtggc tgaagtcttt gggcgcacgc aaacagtgga cgctgtttgc
      481 acaggaatat gccaaactcg aaccggcagg gcgcgcccaa gaagtcgaat gctacgccga
      541 ttcgagccgc aacgactata cgcgtgccgc cgaactggtc aaaaatacgg gcaaactgcc
      601 ttcgggctgc accaaactgt tggaacaggc agccgcatcc ggcttgttgg acggcaacga
      661 cgcctggagg cgcgtgcgcg gactgctggc cggccgccaa accacagacg cacgcaacct
      721 tgccgccgca ttgggcagcc cgtttgacgg cggtacacaa ggttcgcgcg aatatgccct
      781 gttgaacgtc atcggcaaag aagcacgcaa atcgccgaat gccgccgccc tgctgtccga
      841 aatggaaagc ggtttaagcc tcgaacaacg cagtttcgcg tggggcgtat tggggcatta
      901 tcagtcgcaa aacctcaatg tgcctgccgc cttggactat tacggcaagg ttgccgaccg
      961 ccgccaactg accgacgacc aaatcgagtg gtacgcccgc gccgccttgc gcgcccgacg
     1021 ttgggacgag ctggcctccg ttatctcgca tatgcccgaa aaactgcaaa aaagcccgac
     1081 ctggctctac tggctggcac gcagccgcgc cgcaacgggc aacacgcaag aggcggaaaa
     1141 actttacaaa caggcggcag cgacgggcag gaatttttat gcggtgctgg caggggaaga
     1201 gttggggcgc aaaatcgata cgcgcaacaa tgttcccgat gccgacgcaa acagcgtcct
     1261 ccgtatggcg gaagacggcg cgattaagcg tgcgctggta ctgttccaaa acagccggac
     1321 cgccggcgat gcgaaaatgc gccgtcaggc tcaggcggaa tggcgttttg ccacacgcgg
     1381 gttcgacgaa gacaagctgc tgaccgccgc acaaaccgcg ttcgaccacg gtttttacga
     1441 tatggcggtc aacagcgcgg aacgcaccga ccgcaaactc aactacacct tgcgctatat
     1501 ttcgccgttt aaagacacgg taatccgcca cgcgcaaaat gttaatgtcg atccggcttg
     1561 ggtttacggc ctgattcgtc aggaaagccg cttcgttata ggcgcgcaat cccgcgtagg
     1621 cgcgcagggg ctgatgcagg ttatgcctgc caccgcgcgc gaaatcgccg gcaaaatcgg
     1681 tatggatgcc gcacaacttt acaccgccga cggcaatatc cgtatgggga cgtggtatat
     1741 ggcggacacc aaacgccgcc tgcaaaacaa cgaagtcctc gccaccgcag gctataacgc
     1801 cggtcccggc agggcgcgcc gatggcaggc ggacacgccc ctcgaaggcg cggtatatgc
     1861 cgaaaccatc ccgttttccg aaacgcgcga ctatgtcaaa aaagtgatgg ccaatgccgc
     1921 ctactacgcc tccctcttcg gcgcgccgca catcccgctc aaacagcgta tgggcattgt
     1981 ccccgcccgc tgacgtaccg atgccgtctg aaacccgccc ggtctttcag acggcatttt
     2041 tatcccgaac ggcattgacg gcgaaccata aatataagac aatccgaaaa ttgtttttcc
     2101 tgctttttca agcagcttga cacggcacaa gccgacccgt taggaggtga tgtttccgtc
     2161 acggcgcgta tcccgccgcc gcaaggcaca gcgatacggt aaaccttcaa caccgtctgc
     2221 cctacccttt ccaccgatat gatgggcaga tgaaacaacc gaatttatta aaggaaataa
     2281 aatgcctgca atccgcgtaa aagagaatga accatttgaa gtcgctatgc gccgtttcaa
     2341 acgcgccgta gaaaaaaccg gcctgctgac cgagctgcgc gcccgcgaag cctacgaaaa
     2401 accgactacc gaacgcaaac gcaaaaaagc ggcagccgta aaacgcctgc aaaaacgcct
     2461 gcgcagccaa caactgccgc ccaaaatgta ctaaacgttc aagtacagat tacaggtcag
     2521 ccctgtgata tgaggacaca ccgcaagacc tgctctgcgg tgtgttttgc ttttcagacg
     2581 gcatcgaaac ccgccgtttc catccgacat cccagcgagg acatcatgag cctgaaaatc
     2641 cgccttaccg aagacatgaa aaccgcgatg cgcgccaaag accaagtttc cctcggcacc
     2701 atccgcctca tcaacgccgc cgtcaaacag tttgaagtgg acgaacgcac cgaagccgac
     2761 gatgccaaaa tcaccgccat cctgaccaaa atggtcaaac agcgaaaaga cagcgcgaaa
     2821 atctacactg aagccggccg tcaggatttg gcagacaaag aaaacgccga aatcgaggta
     2881 ctgcaccgct accttcccca aatgctctcc gccggggaaa tccgtactgc ggtcgatgcc
     2941 gccgttgccg aaaccggcgc ggcaggtatg gcggatatgg gcaaagtgat gggcgtattg
     3001 aaaacccgcc tcgccggcaa agccgatatg ggcgaagtca acaaaatcct gaaagccgtg
     3061 ctgaccgcct gattgcccga atatcggaca aaatgccgtc tgaagcccgt atcgcaggtt
     3121 cagacggcat tttcatggtt tgatgatatt tataaaaatt ttgcaacacg ctcatgcaca
     3181 gcaactgccg ctgctcgttg gcgttgccgc tctatcgctt ggttagctgc accataattg
     3241 cactctaatg ctgatgcaat aacgtcccaa tatcgaatcg gcaggggcaa cacggtttcg
     3301 atacaccgaa acgggttttg ccgataaacg gattccgttt gcgccccatc ggacaaaatg
     3361 ccgtctgaaa cacgattccg ttcagacggc atagatttat ttgaccaatt tcaagccttt
     3421 tttggcgggc cggggcgcgg tttcggcaga ggtgttttca ggcggcgtgt cggggcgata
     3481 cgcttccaat tcaaacccca taccttcgcc ggtctcccgt gcgaaaaggc tgaggacgtg
     3541 tccgacaggt atccatatgt cgtgcgcctg tccgccgaag cgggcggaaa agctgatcca
     3601 atcgttgtcg atttgaaggt tttgcgtggc ggtcgcgccg atgttgagca taatttcgtt
     3661 gtcgcggacg tactgcatgg ggacacgcgt gtgttcgttg acccagacaa gaatgtgcgg
     3721 cgtgaggctg ttatcgctgc accattcgca aagtgcgcgg aggatgtagg gtttggtgga
     3781 agtgggcata atgggttccg tgtggtgtgc ctgaatgtga aaatgcctac aaaacggcgg
     3841 gttttgcaag cattccgggc ttatttgcgc atggcttttt cggcgggtgt cagtgcttcg
     3901 ataaaggctt cgcgctggaa gatgcgctcg gcgtatttga gcagcggcgc ggcacttttg
     3961 cccagtttga catcgtagtg gtcgagccgc cacagcagcg gagcaagggc gacatcaatc
     4021 atagaaaaat cttcgccgag gatgtatttg cttttgctga acgaaggggc aagcatggtc
     4081 agaccgttgc cgatggcttc gcgcgctttt gcctgttcct tgttggtggc ggcggggttt
     4141 tctaacactt ggacgtggtt gaacaattct ttttccatac ggtacagcac cagccggccc
     4201 cggccgcgca taacgggatc gccgggcata agctgcggat gagggaagcg ttcgtcgatg
     4261 tattcgttga tgatgttgga ctcgtgcagc accaaatcgc gctcgaccag cacgggaact
     4321 tggttatacg gattcatgac ggcgaggtct tcgggtttgt tgtaaatatc gacgtctttg
     4381 atttcaaaat ccataccttt ttcgtacaaa acgaagcggc agcggtggct gaaggggcag
     4441 gtaatgccgg aatagagggt catcataata attgtcgctc ctgtgtgatg cctgcaaaac
     4501 ggctgattta taaaggttta atcgcgcaat tatacgcgat ttccggcact taatccagaa
     4561 attcggctca atctgttgtt tttaatatat tttccccgat tttccgtatc agtgcgaact
     4621 tactgtcttt gttgcgcggg cgcgcaccct gccagaccgt ctgccagcct tgcgacgcat
     4681 ccgcattttg gggcaagcgg acgatacggt agcggcattg tacatcgccg acgcggtgcg
     4741 gcaatgtgcc gtactgcgtc caaacaatcc gcgtgtgcag gtcgccgccg cctatgtcga
     4801 tacactcgat gccgtctgaa agctcccgtt ttaattccgg ggaaagcgat gcctccatac
     4861 tccggacgac cggcgcgtgg cttttcgccg cgtccagcca cggcaggaac agcgtcatca
     4921 gcaaagccca ggtcagggta acgcctgccg cccagttggt aaccgcctgc ctgccgcgta
     4981 tgtttttccg ggtaatcgcc cacagccaca agggtgtgaa cagtacggca accgccatcg
     5041 gaatgggatc gatatcagga acataatacg ggctgaaata ggcggcgcgt tcggcaagct
     5101 tggcgggcca gccgtaattc atggcgaaaa agcccgtcca caggaacacg gcaaacagtc
     5161 cgaacgccat aatgccgaac cagttgacaa acgccgccgc gccgcgcctc aggctgtcca
     5221 gttgcgccgc gccgaacagg gcaagcggcg gcagcagcca gacgaggttg tcctgaaaac
     5281 gctgcggatt ggcggcgagc agcaccaaaa cggcaagcat ccacacaacg cccaaaatcc
     5341 cccagtcggt cgaaaacagg cgcgtgcggc aaaccgtcca aaccgccagc ggcagcgcgg
     5401 gcagtgcaaa ccaaagcagg tttttcagat agtaaaacaa actgaatgcc gtctgaacgt
     5461 gccgcacgcc gccgaacgta ccgaaaacgt gatcgtcgag ccattgcgcg aacagcgcgg
     5521 gctgcgtttt tgccaagagc agcgggtaaa cggtcatcag cggcagggca aaggcaagcg
     5581 aggcgactgc cgtcaacatc aaacgcctgc tttgccacgg acggaaaaac atcagcactg
     5641 gcaggggcag catcagggca aatgctgccg gataagctgc tgccaacgac atcagcgtcc
     5701 aacccgtacc gagcagaaaa gaggcggcaa tcacacggcg gcacgccagc gagtagccgt
     5761 gcagcaccag tccggcggcg gcaaaggcgg cggcagcggg attgagaaag tgtacggtcg
     5821 gaatcagccc gatacagccg ataaggatta aaacaacgct gcgcccgtgg tgtctgccca
     5881 aaaagttgaa accggcaaag ccgcaggaag tcagtccgac aacggcgaaa aacacgcctg
     5941 caaagcgtgc ggcatcgtat gagtcggcag cccacggcga cagcaaatgt ttgaacgcgg
     6001 cggcaaccca aagatacacg ggcggtatgc cgaaatcggt ttgaccgaac agatgggcaa
     6061 ccaagggggt ggggctgcct gccagtgctt cgacggcggt atagacggca ggttcggcag
     6121 gattccataa atcatgtgaa aatacacccg gccacaacca ggcaaacgcc atcaacagca
     6181 gcagccacgg cttttcgtgg gttttggcgg gcgggcgggc atcgggcggg gtataggtca
     6241 gcataagcgt gagaaaaaat ggacggattg ccaagtgtag caaatattcg cacaaaggtc
     6301 gtgcagagac tgcttcagac ggcatcagac acaaaaagac cggcaacaaa aaagactgca
     6361 catggcagtc tttgcagata ctatcttttt cataatattt tttcctagcc caacacagtc
     6421 catagcatat caaaactgtt gttttcaacc aggatatata tccccaatcc taaataaaca
     6481 acagcaacaa accatctgct atatttttcc aaagtttctc caacagaagg gacttgtgct
     6541 aatttttggg cagaaaaaac caagagataa atcatgacta gaaaggtaag taaagccact
     6601 atcaaattcg ctaaatttaa ggtagtaaaa tatgggacaa agacaccaat attgtcagca
     6661 ccacaacttg caaaagtaat catagcgact agaaaaatca ggtttttatt atctttgcgc
     6721 aaaccctctt tggcaatagc ctctccatca gaatctccta acagcaaaac tttgatgcct
     6781 aggaaaattg gaatcaagcc gagcaaacct aaaatctctt tactaggaat ataatctaag
     6841 acaaatgcaa aaagcaaact tagcaatatc aggctaacag agcctagaaa ttgtcctaaa
     6901 tagatgttaa tgatgtcttt tctgcttttt cttttggcaa aaaataacat taggataata
     6961 agtaagtcta cggctgtccc agaatacagg attattgaag taacaacatt ttgaatcata
     7021 aaacatctca ttcaaatata tttttaaatg tattcaaaca ttaaaccttg tagatgtcaa
     7081 cttcaacccc gtca
//
LOCUS       DBBZXW010000100         7089 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.100, whole genome shotgun sequence.
ACCESSION   DBBZXW010000100 DBBZXW010000000
VERSION     DBBZXW010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7089
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.100"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(17..955)
                     /locus_tag="ACJJD2_001764"
     CDS             complement(17..955)
                     /locus_tag="ACJJD2_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580253.1"
                     /translation="MDAYTEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
     gene            1262..2374
                     /gene="nadA"
                     /locus_tag="ACJJD2_001765"
     CDS             1262..2374
                     /gene="nadA"
                     /locus_tag="ACJJD2_001765"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HGG7580254.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETADRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            2426..3934
                     /gene="nadB"
                     /locus_tag="ACJJD2_001766"
     CDS             2426..3934
                     /gene="nadB"
                     /locus_tag="ACJJD2_001766"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HGG7580255.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEASAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NHNDLHLTREGGHTCRRIAHVADYTGEAVMQSLLAQIRRRPHIRVCERQMALDIQTES
                     GVACGLIVLDRRTQETYLIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARSSENGRTFLISEAVRGEGGILTNQAGERFMPYYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYSLGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAKTSPRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRC
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            complement(4112..4777)
                     /gene="pgmB"
                     /locus_tag="ACJJD2_001767"
     CDS             complement(4112..4777)
                     /gene="pgmB"
                     /locus_tag="ACJJD2_001767"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HGG7580256.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRRKNDNYVEMIQAVKPEDVYLGILPLLEA
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPIGVGKAEDLGSDIALVSDTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(4790..7048)
                     /locus_tag="ACJJD2_001768"
     CDS             complement(4790..7048)
                     /locus_tag="ACJJD2_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HGG7580257.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFDVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFESEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDESYLAKEGLE
                     VLVEVSRFWADRVHFSKRSGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYTFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
BASE COUNT         1445 a         1977 c         2083 g         1584 t
ORIGIN      
        1 gtcgtctgaa aacgggctaa cggctgccca gcggcaatcc gatgtccgaa atcagcctgt
       61 cgggcaggac gtcgtcgcgg aagcggcaaa gctgcgcggg acggcctttg ctgcccgata
      121 cgccggtatc cgacggctcg ataaggtttt gctgctgaat ctggcggcgg aagttttgct
      181 tgtgcagcaa tcttccgctg atggcttcga cactgttttg cagttgcagc agcgtgaatt
      241 cgggcggcat cagttcaaaa atcacggggc ggtatttgat tttggcgcgc aggcgggaca
      301 gggcggtcgc cagtacgcga cggtgatcgt ggcgcatggg ctgccccgtg agcgcgaagt
      361 cgaagtttgc ctgcggctcg gcggcttcca ctatcagacc gctttcatac agcatttcat
      421 agcgttgtaa aacgtattct tccgaccagt tttccggttc gaccccccag cacaaatgaa
      481 tgcgcttgag ccgcatttga cgcacttcct ccgtgtccgc cgaatttgcc caaatgcgca
      541 ggcggctgac gacggcgtcg cgctgcccgc cgtcggtgcg caagtcttcc cacgggaaat
      601 agccgtagca gtcctgccat ttcgcatccg ggtgcaggat gctgtcggct gcctcgcgca
      661 ccagccccaa atagctgacg tacaagacgg gcatgccgtg ttcgttgcgg cggtgggtat
      721 cgacaaaggt gtaaagctgt tccacatagc ccataggctg cgaagtctgc ttggcaaccc
      781 acagcttcac gcccgcctgc agggaattgc gcagagggga gagcgggccg ttgggcagga
      841 gtgtgccttg ggcgacggtt aatacccgca ggccgccgtc ggtaacggca atcaatacgg
      901 gaaccagctc gacgatgctt tgcggcgggg cttcggcttc ggtgtaggca tccatgctcg
      961 gctttctgcg ggtgggaaag gctttattgt atagtggatt aaatttaaac cagtacagcg
     1021 ttgcctcgcc ttgccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt
     1081 tgttaatcca ctataaacca aagcggtttg tcggaacgaa gcgggtcggt tttacggtat
     1141 cgcaaacctg ttttcagacg accttgctta ttatactcaa tttgagcata atataaaaat
     1201 atttcaaaat ataaacggca aatctttatg ccgtctgaaa aaccagccat aaggaagtct
     1261 catgcaaacc gccgcccgcc gctcgttcga ctacgatatg ccactcatcc aaacgccgac
     1321 ttccgcctgc caaatccgtc aggcgtgggc gaaggttgcc gacacgcccg accgcgagac
     1381 ggcagatcgt ctgaaagacg aaatcaaggc tttgctgaag gagaaaaacg cggtcttggt
     1441 ggcgcattat tatgttgatc cgctgattca ggatttggct ttggaaacgg gcggatgcgt
     1501 gggcgattct ctggaaatgg cacgcttcgg cgcggaacac gaagccggta cgctggtggt
     1561 ggcgggcgtg cgtttcatgg gagagagcgc gaaaatcctc tgccctgaaa aaacggtgct
     1621 gatgcctgat ttggaagcgg aatgttcttt ggatttgggt tgcccggaag aggcgttttc
     1681 ggcgttttgc gaccaacacc ccgaccgcac ggtggtggtg tacgccaaca cttccgccgc
     1741 cgtgaaagcg cgtgccgatt gggtggtaac gtcttcggtg gcgttggaaa tcgtgtcgta
     1801 tctgaaatcg cgcggcgaga agctgatttg ggggcccgac cgccacctcg gcgactacat
     1861 ccgccgcgaa acgggcgcgg atatgctgtt gtggcagggt tcgtgcatcg tccacaacga
     1921 atttaaaggg caggagctgg cggcgttgaa ggcggaacac cccgatgcgg tggtgctggt
     1981 tcatcccgaa tcgccacaaa gcgtcatcga actgggcgac gtggtcggct cgaccagcaa
     2041 actgctgaaa gctgccgtat cacgccccga aaaaaaattc atcgtggcga ccgatttggg
     2101 catcctgcac gaaatgcaaa agcaggcgcc cgacaaagaa tttatcgccg cgccgacggc
     2161 gggcaacggc ggaagttgca aaagctgcgc gttctgcccg tggatggcga tgaattcgct
     2221 gggcggcatc aaatacgccc tgacaagcgg acgtaacgaa atcctgttgg acaggaagct
     2281 gggcgaagcc gccaaactgc ctttgcagcg tatgctcgac ttcgcggcag gactcaaacg
     2341 cggggatgtg ttcaacggca tggggcccgc ctgatttgcc gtccatattg ccgtttcaga
     2401 cgacctctcc aacaaggaca acaccatgca aaccgattgc gacgtattga ttgccggaaa
     2461 cgggctggcg gcactgacgc tcgccctgtc gctgcctgaa tcgttccgca tcgtcatttt
     2521 gtgcaaaaac cggctggacg acaccgccag ccgtcatgcg caaggcggga ttgcggcggc
     2581 gtggtcggga gaggacgaca tcgaaaaaca cgtcgccgat actttggaag cgagcgcagg
     2641 tttgtgcgac gaagccgccg tccgcaccat cctgtcgcag ggcaaaccgg caatcgaatg
     2701 gctgttggcg cagggtgtgg cgttcgaccg gaatcataac gacctgcacc tgacgcgcga
     2761 aggcgggcat acctgccgcc gaatcgccca cgtcgccgac tacacgggcg aagccgtcat
     2821 gcagagcctg cttgcccaaa tacgccgccg cccgcacatc cgcgtttgcg agcggcagat
     2881 ggcgttggac attcaaaccg aatcaggtgt ggcgtgcgga ctgatcgtcc ttgaccgccg
     2941 aacgcaagaa acctacctca tccgcgcccg ccataccgta ctcgcaggcg gcggcttggg
     3001 acagatttac gccgccacca ccacgccgcc cgaatgcacg ggcgacgcca tcgccatggc
     3061 gatacgcgca ggctgcgcag tcgaaaacct cgaatttatc caattccacc ccacaggctt
     3121 ggcaagatcg tctgaaaacg gccgcacctt cctgatttcc gaagccgtgc gcggcgaagg
     3181 cggcatcctg accaaccaag cgggcgaacg gtttatgccg tattacgacc gccgcgccga
     3241 actcgcgccg cgcgacatcg ttgcccgcgc catcgccgcc gaaatcgcca aacaaacgca
     3301 agacttcgtc tcactcgata tcagccatca acccgcagcg ttcgtccgcc ggcatttccc
     3361 gtccatccat cggcactgtt tatcccaatg cggcctggat atcacgcgcc aagccatccc
     3421 cgtccgcccc gtgcaacact acacctgcgg cggcatccaa accgacccct gcggcagaac
     3481 ttccctgccg cagctctact ccttaggcga aaccgcctgc accggcttgc acggagccaa
     3541 ccgccttgcc agcaactccc tgctcgaatg tgtcgttacc gccagacttg ccgcccaaac
     3601 catcgcagac ggacaagcat tccaagccaa aacgtctcca aggccgtctg aaagcctctc
     3661 ctccgaagca ggcatctttt cagacggcat ccaaagcgca ttcagccgcc ccgtcctgca
     3721 agcgttcaac caacgccatc tgggcatcct ccgcaacgat accggtctgc gctgcgccat
     3781 cgcccagctg cggctttgga aacaaaacca aaccgaaccg cacaccgcgt ccgaatacga
     3841 aaaccgcaac ctgctcgaat gcagcctcgc cgtcgcccaa gccgcataca ggcggagaca
     3901 gaacatcggc gcgcatttta atagtgattg ttaaggttgg ctggttagaa aaaaaatcgt
     3961 tcaaataaat ttgaatagca tggttaagaa attggcattt agtttttagg gttgcgtaag
     4021 ttgggttatc aatctgttct aaaagcagaa aggccgtctg aaacactgtt cagacggcct
     4081 tttacttcct tgacacttta tctgacgcgt tttacctgcc cgactgtgcc cacacgtttt
     4141 gcaggtaggc gtaggtcagc tcggcggtat cggacaccag cgcgatgtcg ctgcccaagt
     4201 cttcggcttt gcccacgccg ataggcaagg cgccggcggc tttgatggcg gcgacacctg
     4261 cggcagcgtc ttcaatgccg atgcagcggc ggatgtccgc gcccacgccc tcggcggcgg
     4321 cgaggaagat gtcgggggcg ggtttggaat gcgcgacggc ggcagggtcg gcgacggtgt
     4381 cgaagaagtg ggtcagcccc atgcgttcga gcaggaaggg gccgttttta ctggcggacg
     4441 caagggcgat ttttttgccg tttgctttta atgcttccag cagcggcaaa atgccgagat
     4501 acacgtcttc gggtttgact gcctgaatca tctcgacgta gttgtcgttt ttgcggcggg
     4561 tcagttcggc gaactcggct tcgccgacgg ttttgccgcc gtgtgcgagg atgcgtttga
     4621 gcgaatcgtc gcgcgacacg cctttgagct gctcgttaaa cttgcggtct atgccgatgc
     4681 ccagttcttc ggcgagcttt ttccatgcgc ggtagtggta ttcggcggtg tcggtgatga
     4741 cgccgtcgag atcgaagagc actgcggtaa acgtcatttt gcgccctcct tatttttcca
     4801 acgcggcggt atggctgccg ttgagtgtga tgtctttgcc gtacacctgc aaatcgagcg
     4861 gctcgccttt gagcagggtg aagacgacgt tttctttgcc gacggcgact ttaatcagac
     4921 ggcctcggta gttgatatgg aaggtgtagc ctgtccacgc gctcggcagg aacggtgcga
     4981 agctgagttt accgccccaa gttttcattt gggcgaaacc ttggacgatg gcgagccacg
     5041 agccggtcat agaagtaatg tgcaggccgt cttcggtgtc gttgttgtag ttgtccaagt
     5101 ccaggcgtgc ggtgcgccgg tacatttcca cggctttttc ttctttgccc agttcggcgg
     5161 cgagaataga gtggatacac ggcgacaacg agctttcatg cacggtcatc ggttcgtaga
     5221 agtcgaagtt gcggcgtttt tcgtcgatat tgaaacggtc gccgaagaaa tagatgcctt
     5281 gcaatacgtc cgcctgtttg ataaagggcg aacgcaggat tttgtcccac gaccatttct
     5341 ggttgagcgg caaatcgtcg ggcgaaagcg cggacacggg gcggatgtct ttgtcgagga
     5401 agccgtcgtg ttgcacgaat acgccgagtt cttcgtcatg aggacggtac atattcgcgc
     5461 tgatgtccgc ccatttttcc aactcggcgg cgctcacgtt caaatccgga cgcgggtatt
     5521 tcgccagggc ttcgcgggtg tagtccaata cccatgcggc gagggtgttg gtgtaccagt
     5581 tgttgttgat gttgttttcg tattcgttcg ggccggttac gccgtgaatc atgtatttgc
     5641 cgctgcgttt ggagaagtgg acgcggtccg cccagaagcg ggacacttcg accaagactt
     5701 ccaagccttc tttggcaaga tagctttcgt cgccggtgta gttggtgtag ttgtagatgg
     5761 cgtaaggaat cgcgccattg cggtggattt cctcgaaggt gatttcccat tcgttgtggc
     5821 actcgatgcc ggtaaacgtt accatcggat agagtgcgcc cgccaagccc tgttcgcgcg
     5881 cgttgtgctg cgcctgcggc agttggttgc ggcggtattg cagcaggttg cgggtaactt
     5941 cgggttccgc cagtgcgagg tagagcggta cggcataggc ttcggtatcc caataggtcg
     6001 cgccgccgta tttttcgccg gtaaagcctt tggggccgat gttcaggcgc gcgtcttcgc
     6061 cgtagtaggt ggagaacagt tggaacagat tgaaacggat gccttgctgc gcttcgtcgc
     6121 tgccttcgat gaccacgtcg gcgatttccc aacggtgcag ccagcctgct ttgtgcgcgt
     6181 ccagcaaggt ttcaaacgca acgcctgcga ctttttccga caaggcgcgg cctgcggctt
     6241 tcactgcttc caagccctga taatcgcggc tggtggtaac aatcacgcgt ttttcaaagg
     6301 ttttgggcgt gccgccgact tcggactcga aagaattgga gacctgccag tcggtttggc
     6361 tgccgccgag ggctttgaag ctgccggcga aagtttgctc ggcgttgacg ataaattgtt
     6421 ccacgccgaa gggattggcg acggtttggg cggcaatgta ggagagactg tctgaaacgc
     6481 ctttgtccaa tacctgccag aatttttctt cgtagttgga gtcttcgttt ttcacgtcgg
     6541 catcgatgat ggaatcgatg cggacttggt gggttttgcc gtcaacggat acggcttccc
     6601 agcggatgac cgccaactct ttttgcgcga cggacaggaa tttacacaca tcgaaacgca
     6661 cgccgaatac ggtgaacgag cggcgcaaca cgccgtgctg catatcgagt tcgacggaga
     6721 agccggcaac atcgtttttc gccaagtcca cctcttgtcc gtcgacaaag attttgactt
     6781 tgctgaaatt gagcgcgttg atggctttac cgaaatattt ggggtagccg tttttccacc
     6841 agccgacgcg ggttttgtcg ggaaaccaca caccggcgat gtaggtaccc aagtggctgt
     6901 cggcggaata ggtttcctca aagctgccgc gcatacccat atagccgttg cccaaactgg
     6961 tcaggctctc ttgcagccgt ttgtgttctt tttccagctt tgccgaacgc agcgtccaag
     7021 ggctgatttc cataattctt gtgtacattt atgaagctcc tgtttggatt gatttgaggg
     7081 aatggtgaa
//
LOCUS       DBBZXW010000101         7030 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.101, whole genome shotgun sequence.
ACCESSION   DBBZXW010000101 DBBZXW010000000
VERSION     DBBZXW010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7030
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.101"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            99..1004
                     /gene="glyQ"
                     /locus_tag="ACJJD2_001769"
     CDS             99..1004
                     /gene="glyQ"
                     /locus_tag="ACJJD2_001769"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HGG7580258.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1081..1491
                     /locus_tag="ACJJD2_001770"
     CDS             1081..1491
                     /locus_tag="ACJJD2_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding protein YggL"
                     /protein_id="HGG7580259.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFGRFMDELIAYLVVNGFEMAGGGDCGDFSCLFQKSGARSLGETEKKAIISWLA
                     DREDVATLYATPLVDGFYGDDGWENYSETYKQAD"
     gene            1512..3575
                     /gene="glyS"
                     /locus_tag="ACJJD2_001771"
     CDS             1512..3575
                     /gene="glyS"
                     /locus_tag="ACJJD2_001771"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HGG7580260.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLIAGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGGLLEDIINAAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVVA
                     SFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIA
                     TAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDVVAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3592..3993
                     /locus_tag="ACJJD2_001772"
     CDS             3592..3993
                     /locus_tag="ACJJD2_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7580261.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNAEKYFAQSLAAVVNQ
                     TWRNLEILIVDDGSTDGTLAIAKDFQKWDSRIKILAHDRLLNRKQQRRDSPANTFKHR
                     LIRALTKISREREKRRQRREQLIGKIIVPFQ"
     gene            4005..4945
                     /locus_tag="ACJJD2_001773"
                     /pseudo
     CDS             4005..4945
                     /locus_tag="ACJJD2_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712695.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
     gene            5000..5995
                     /locus_tag="ACJJD2_001774"
     CDS             5000..5995
                     /locus_tag="ACJJD2_001774"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7580262.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLAAVVNQTWCNLDILIVDDGSTD
                     GTLAIAKDFQKRDSRIKILAQAQNSGLIPSLNIGLDELAKSGGEYIARTDADDIAAPD
                     WIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHGKIWKKPTRHEDIADFFP
                     FGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSKLGRLAYYPEALVKYRLH
                     ANQVSSKYSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQIKAVAYELLEKHLP
                     EEDFERARRFLYQCFKRTDTLPAGAWLDFAADGRMRRLFTLRQYFGILHRLLKNR"
     gene            6037..6864
                     /locus_tag="ACJJD2_001775"
     CDS             6037..6864
                     /locus_tag="ACJJD2_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HGG7580263.1"
                     /translation="MQNHVISLASAAERRAHIAATFGARGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLKERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISK
                     KAIRFFLQHFVMLQPEQIKPIDLMMFSDFFDKEGMPVYQVSPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQRRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            6876..6971
                     /locus_tag="ACJJD2_001776"
                     /pseudo
     CDS             6876..6971
                     /locus_tag="ACJJD2_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
BASE COUNT         1813 a         1919 c         1831 g         1467 t
ORIGIN      
        1 tatgccgtgt tttcaaatca gtctgtcttc gagataaacc tatccaaaca gcaatggaaa
       61 cagtaaaata aaccctttat tttatcgaat cataagccat gcttaccttc caacaaatca
      121 tcttcaaact gcaaacattc tgggcagaca aaggctgcac cgtcatccaa cccttcgaca
      181 tggaagtcgg tgcaggtact tcccatcccg ccacctgcct gcgcgcgctc gggcccgagc
      241 cttggtttgc cgcctacgtc caacccagcc gccgccccaa agacggccgc tacggcgaca
      301 accccaaccg cctgcaacac tattaccaat tccaagtcgc cctcaaaccc gcccccgcca
      361 atatccaaga cctttatctc gactccctgc gcgaattggg catcgacccc aaagtgcacg
      421 acatccgctt tgtcgaagac gactgggaaa accccaccct cggtgcgtgg ggtttgggct
      481 gggaagtctg gctcaacggt atggaagtaa cccagttcac ctatttccaa caagtcggcg
      541 gcatcgactg cacccccgta ctcggcgaaa tcacctacgg catcgaacgc ttggcgatgt
      601 acctgcaagg cgtggaaaac gtctatgacc tcgtttgggc aaaaacgctg gacggtaata
      661 cagtaactta cggcgacgtg taccaccaaa acgaagtcga acaatccacc tacaacttcg
      721 aatacagcga tgccgattgg ctgctgcgcc agttcaacga ctacgaagcg caagccaaac
      781 gcctgcttgc cgaagaaaac gccgccctcg ccttgcctgc ctacgagctg gttctcaaag
      841 cggggcatac gttcaatctt ttagacgcac gcggcgcgat ttccgtaacc gagcgggcaa
      901 cttatattgg acgtattcgt gcattgagcc gcgccgtggc gcaaaaatat gttgaaagcc
      961 gcgaaaaact gggcttccct ttaatgaagg caaatgctgc ctaagggggc gacgattttt
     1021 tacgttcggg cggcacgata aggcagccgt ccgtaaacca ttatatattt taggaaaatc
     1081 atgcctgtct atttccgcac cccaagcagg aaacgcctgc acaaaatgaa ccgccgccag
     1141 cataaaaagc tgcatttggg cgagtttcaa acattgattt tcggcgttca aggcagtttg
     1201 caccaagctg aggacgatgc cgaagcgttc ggccgcttta tggacgagct gattgcgtat
     1261 cttgtggtaa acggctttga aatggcgggc gggggcgatt gcggcgattt ttcgtgcctg
     1321 tttcaaaaat ccggtgcccg aagcttggga gaaaccgaga aaaaagccat tatctcttgg
     1381 ctggcagacc gcgaagatgt tgccactttg tacgccaccc cgctggttga cggtttttat
     1441 ggggatgacg gctgggaaaa ttacagcgaa acctataaac aggcagatta accaaattca
     1501 aagaaagccg aatgatgacc caaacccttt taatcgaact ccttaccgaa gaacttcccc
     1561 caaaagccct gaataattta ggcaaccatt tcgccgcttc cgttgccgaa ggcttggaaa
     1621 aagcgcaact gatagccggc gcggcagaat ttaccgccta cgcttctccg cgccgtttgg
     1681 cggttcaagt caaaaacgtc aaagccgtgc aagccgatca gaaaatcgtg aaaaaaggcc
     1741 ctgccgtggc gaatgccgta aaagacggtg cgccgaccaa ggctttggaa ggtttcgcac
     1801 gcggtgcggg cgcgaaaatc gaagacttga ccatcgtcca cgacggcaag caggacgtgt
     1861 acgcctacga atacgtccaa accggcaaac cgttgggcgg acttttggaa gacattatca
     1921 atgccgcagt gaaaaaactg ccgattccga aagtgatgcg ttggggcagc agcacattta
     1981 ccttcgtgcg ccccgtccac gggctgattg tgctgcacgg cggcgacatc gtaaacgtca
     2041 gcgttttggg tctgcaaagc agcaatcaaa ccttgggaca ccgcttcttg tccaacggcg
     2101 aaatcaccat tgaaaacgcc gacagctacg ccgcacaaat gcgcgagcaa ggcaaagtcg
     2161 tcgcttcgtt tgccgagcgc aaagccgcga ttcagacggc attggaaggg caggcgcgcc
     2221 gtctgaacgc gaccgttgcc gccgatgaag cattgctgga cgaagtaacc gcgctggtcg
     2281 aataccccgt tgttttggaa gccggttttg aggaacactt cctcgccgtg ccgcaggaat
     2341 gcctgattct gacgatgcag caaaaccaaa aatacttccc gctgctcgac caaaacggca
     2401 agctgatgaa ccgcttcctg ctggtttcca acctgcaaac cgaagatccg tcgcacatca
     2461 tccgaggcaa cgaacgcgtc ttgcgcgcgc gcctgtctga tgccgagttc ttctacaaac
     2521 aagaccaaaa agcgactctg gaaagccgcc tgcccaagct ggcaaacgtg gtgtaccaca
     2581 acaaaatcgg ttcgcaagcc gaacgcatcg aacgtttgca aagcattgcc gcccacatcg
     2641 ctaaagcgtt gggcgcagat gctgccgcag ccgagcgcgc cgcgcgtctt gccaaagccg
     2701 atttggttac cgaaatggtc ggcgagttcc ccgaattgca aggcacgatg ggcaaatact
     2761 atgcccgctt ggacggcgaa actgaagaaa tcgccgaagc cgtcgagcaa cattaccaac
     2821 cgcgttttgc cggcgacaag ctgcccgaaa gcaaaattgc cactgccgtt gcacttgccg
     2881 acaagctgga aaccctggtc ggcatttggg gcatcggtct gattccgacc ggcgacaaag
     2941 acccctacgc cctgcgccgc gctgccttgg gtattttgcg tatgctgatg cagtatggtt
     3001 tggacgtgaa cgaactgatt cagacggcat tcgacagctt ccccaaaggt ttgctcaacg
     3061 aaaaaacgcc gtctgaaacc gccgacttta tgcaggcgcg ccttgccgtg ttgctgcaaa
     3121 acgattatcc gcaagacatc gttgccgccg tattggcgaa acagccgcgc cgtttggacg
     3181 acgtagtggc gaaactgcaa gccgttgccg cgttcaaaca actgcccgaa gccgccgcgc
     3241 tcgccgccgc caacaaacgc gtgcaaaatc tgctgaaaaa agccgatgcc gagttgggcg
     3301 cggttaacga aagcctgctg caacaggacg aagaaaaagc cctctttgcc gccgcgcaag
     3361 gcttgcagcc gaaaatcgcc gccgccgtcg ccgaaggcaa tttccaaacc gccttgtccg
     3421 aactggcttc cgtcaagccg caagtcgatg ccttctttga cggcgtgatg gtgatggcgg
     3481 aagatgccgc cgtaaaacaa aaccgtttga acctgttgaa ccgtttggca gagcagatga
     3541 acgcggtagc cgacatcgcg cttttgggcg agtaaccgtt gtacagtcca aatgccgtct
     3601 gaagccttca gacggcatcg tgcctatcgg gagaataaat tgcagccttt agtcagcgta
     3661 ttgatttgcg cctacaacgc agaaaaatat ttcgcccaat cattagccgc cgtcgtgaat
     3721 cagacttggc gcaacttgga gattttgatt gtcgatgacg gctcgacaga cggcacactt
     3781 gccattgcca aggattttca aaagtgggac agccgtatca aaatccttgc acacgaccgc
     3841 ctcctgaacc gcaaacagca aaggcgcgat tcccccgcca acacattcaa acaccgcctg
     3901 atccgcgcct tgaccaaaat cagcagggaa agggaaaaac gtcggcaaag gcgcgaacag
     3961 ttaatcggca agatcattgt gcctttccaa taaaaggaga aaagatggac atcgtatttg
     4021 cggcagacga caactatgcc gcctatcttt gcgttgcggc aaaaagcgtg gaagcggccc
     4081 atcccgatac ggaaatcagg ttccacgtcc tcgatgccgg catcagtgag gcaaaccggg
     4141 cggcggttgc cgccaatttg cggggggggg gggtaatatc cgctttatag acgtaaaccc
     4201 cgaagatttc gccggcttcc ccttaaacat caggcacatt tccattacga cttatgcccg
     4261 cctgaaattg ggcgaataca ttgccgattg cgataaagtc ctgtatctgg atatagacgt
     4321 attggtcagg gacagcctga cgcccttatg ggataccgat ttgggcgata actggcttgg
     4381 cgcgtgcatt gatttgtttg tcgaaaggca ggaaggctac aaacaaaaaa tcggtatggc
     4441 ggacggcgaa tattatttca atgccggcgt attgctgatc aacctgaaaa agtggcggcg
     4501 gcacgatatt ttcaaaatgt cctgcgaatg ggtggaacaa tacaaggacg tgatgcaata
     4561 tcaggatcag gatcaggaca ttttgaacgg gctgtttaaa ggcggggtgt gttatgcgaa
     4621 cagccgtttc aactttatgc cgaccaatta tgcctttatg gcgaacaggt ttgcgtcccg
     4681 ccataccgac ccgctttacc gcgaccgtac caatacggtg atgcccgtcg ccgtcagcca
     4741 ttattgcggc ccggcaaagc cgtggcacag ggactgcacc gcgtggggtg cggaacgttt
     4801 cacagagttg gcgggcagcc tgacgaccgt tcccgaagaa tggcgcggca aacttgccgt
     4861 cccgcaccgt atgttttcga caaagcgtat gcttcaaaga tggcgcagaa agctgtctgc
     4921 cagattctta cgcaagattt attgacgggg caggccgtct gaagccttca gacggcatcg
     4981 tgcctatcgg gagaataaat tgcagccttt agtcagcgta ttgatttgcg cctacaacgt
     5041 agaaaaatat ttcgcccaat cattagccgc cgtcgtgaat caaacttggt gcaacttgga
     5101 tattttgatt gtcgatgacg gctcgacaga cggtacgctt gccattgcca aggattttca
     5161 aaagcgggac agccgtatca aaatccttgc acaagctcaa aattccggcc tgattccctc
     5221 tttaaacatc gggctggacg aattggcaaa gtcggggggg gaatatattg cacgcaccga
     5281 tgccgacgat attgccgccc ccgactggat tgagaaaatc gtgggcgaga tggaaaaaga
     5341 ccgcagcatc atcgcgatgg gcgcgtggct ggaagtgttg tcggaagaaa aggacggcaa
     5401 ccggctggcg cggcatcaca ggcacggcaa aatttggaaa aagccgaccc ggcacgaaga
     5461 tattgccgac tttttccctt tcggcaaccc catacacaac aacacgatga ttatgcggcg
     5521 cagcgtcatt gacggcggtt tgcgttacaa caccgagcgg gattgggcgg aagattacca
     5581 attttggtac gatgtcagta aattgggcag gctggcttat tatcccgaag ccttggtcaa
     5641 ataccgcctt cacgccaatc aggtttcatc caaatacagc gtccgccaac acgaaatcgc
     5701 gcagggcatc caaaaaaccg ccagaaacga ttttttgcag tctatgggtt ttaaaacccg
     5761 gttcgacagc cttgaatacc gccaaataaa agcagtagcg tatgaattgc tggagaaaca
     5821 tttgccggaa gaagattttg aacgcgcccg ccggtttttg taccaatgct tcaaacggac
     5881 ggacacgctg cccgccggcg cgtggctgga ttttgcggca gacggcagga tgcggcggct
     5941 gtttaccttg aggcaatact tcggcatttt gcaccgattg ctgaaaaacc gttgaaaaac
     6001 gccgctttat ccaacagaca aaaaacagga taaattatgc aaaaccacgt tatcagctta
     6061 gcttccgccg cagaacgcag ggcgcacatt gccgcaacct tcggcgcgcg cggcatcccg
     6121 tttcagtttt tcgacgcact gatgccgtct gaaaggctgg aacaggcaat ggcggaactc
     6181 gtccccggct tgtcggcgca cccctatttg agcggagtgg aaaaagcctg ctttatgagc
     6241 cacgccgtat tgtggaaaca ggcattggac gaaggtctgc cgtatatcgc cgtatttgag
     6301 gacgacgttt tactcggcga aggcgcggag aaattccttg ccgaagacgc ttggctaaaa
     6361 gaacgctttg accccgattc cgcctttatc gtccgcttgg aaacgatgtt tatgcacgtc
     6421 ctgacctcgc cctccggtgt ggcggactac tgcgggcgtg cctttccgct gttggaaagc
     6481 gaacactggg ggacggcggg ctatatcatt tccaaaaaag cgatacggtt tttcctgcaa
     6541 catttcgtaa tgttgcagcc ggaacagata aaacctatcg acttaatgat gttcagtgat
     6601 tttttcgata aggaggggat gcctgtttat caggtcagtc cggccttatg cgcccaagag
     6661 ctgcattatg ccaagtttca cgaccaaaac agcgcattgg gcagcctgat cgaacacgac
     6721 cgcctcctga accgcaaaca gcaaaggcgc gattcccccg ccaacacatt caaacgccgc
     6781 ctgatccgcg ccttgaccaa aatcagcagg gaaagggaaa aacgccggca aaggcgcgaa
     6841 cagttcattg tgcctttcca ataaaaggag gagagatgga catcgtattt gcagcagacg
     6901 gcaggatgcg gcggctgttt accttgaggc aatacttcgg cattttgcgc cgattgctga
     6961 aaaaccgttg aaaaacgccg ctttatccaa cagacaaaaa acaggataaa ttatgcaaaa
     7021 ccacgttatc
//
LOCUS       DBBZXW010000102         6845 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.102, whole genome shotgun sequence.
ACCESSION   DBBZXW010000102 DBBZXW010000000
VERSION     DBBZXW010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6845
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.102"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..150)
                     /locus_tag="ACJJD2_001777"
     CDS             complement(<1..150)
                     /locus_tag="ACJJD2_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7580264.1"
                     /translation="MLRFFVLEVTARSAADILGIHPNSAALFYRKIRMVINHHLALAA
                     DEVFEG"
     gene            251..751
                     /locus_tag="ACJJD2_001778"
                     /pseudo
     CDS             251..751
                     /locus_tag="ACJJD2_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714696.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            754..837
                     /locus_tag="ACJJD2_001779"
                     /pseudo
     CDS             754..837
                     /locus_tag="ACJJD2_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            1118..1552
                     /locus_tag="ACJJD2_001780"
     CDS             1118..1552
                     /locus_tag="ACJJD2_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580265.1"
                     /translation="MCGLWLLRALTAKLPQQRYAALFITLFFAAVLVFGRHDSMYWYP
                     VLVNLMMLAVFGGSLFAGQTVIEKLARLQQPDLPEKAVRYTRRVTQVWCVFFIINGTL
                     AALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYRKLVLKV"
     gene            1559..2074
                     /locus_tag="ACJJD2_001781"
     CDS             1559..2074
                     /locus_tag="ACJJD2_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HGG7580266.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNRLPPYESDTFGMHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            2094..3572
                     /gene="ubiD"
                     /locus_tag="ACJJD2_001782"
     CDS             2094..3572
                     /gene="ubiD"
                     /locus_tag="ACJJD2_001782"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HGG7580267.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(3636..5750)
                     /locus_tag="ACJJD2_001783"
     CDS             complement(3636..5750)
                     /locus_tag="ACJJD2_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HGG7580268.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYAQWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            5841..6734
                     /locus_tag="ACJJD2_001784"
     CDS             5841..6734
                     /locus_tag="ACJJD2_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HGG7580269.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVCIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
BASE COUNT         1481 a         1668 c         2067 g         1629 t
ORIGIN      
        1 gccctcaaaa acctcatcgg cagccaaggc caaatgatgg ttgataacca tgcggatttt
       61 acggtagaac agtgctgccg aattgggatg gatacccaaa atatcggcgg cagaacgggc
      121 ggtaacttcg agtacaaaaa aacggagcag ttctttctgt acttttttct ttcatttgca
      181 gtgcgttatc ttcatatttc gagggtaaca tatctgctaa tctagtacag cccctaaaat
      241 ttaatccact atagtttatg cctcgcacga cggggaaatg gcgcgcagtt tcgatttgtg
      301 gttggaactg ttgaaatcgc aaatcgtgtc gccgacttcg ttcggtttgt cggtgcacaa
      361 tgcaacggcg gggtaatggt cgatattgag gcgggatatg agcgagcaga cggcattggc
      421 cgtgtgtgcc gacggtgtgg aaacggcatt ggcggaagcg gcatcactgt tggaagaggg
      481 atgcgggtcg gttttggttt tggcggcgga cgatccgctg ccggaaggat atgccgtatc
      541 ggcaacgcgc gcgccgtttg cttatgcttt ggcgatggtt ctgaccaaag ggacgcgtta
      601 cagtctgact ttatctgctt cggacgatat gccgtctgaa gccggtatgc tgcccgaggc
      661 atattggagc ggtttggaat gggtgcgctt tctgctgaac ggcagtcggg aatgccgccg
      721 ggtatatcgc aatcgtgaat ggctgtggca gcccgcaagc tgcaggctga agatttccgc
      781 aatgtccgca ccgtcaacga cgtggtacag gcggtattga agattcaggc gggctaatcg
      841 ggtatttcta attatttttc agacggcatg tttttatcgg atgccgtctg aaaacatttg
      901 tgcggattca aaatgaaacc cggttttttc ggacatattt ttctgaccgt attaagcatt
      961 gcctatcccg ctttgtggta tagtggatta acaaaaatca ggacaaggcg acgaagccgc
     1021 agacagtacg gcaaggcgag gcaacgctgt actggttttt gttaatccac tatattacgg
     1081 cagggaggcg ggctggtttg tctggctggc ggcggcgatg tgcgggttgt ggctgctgcg
     1141 cgccctgact gccaaactgc cccaacagcg ttatgcggct ttgtttatta cactgttttt
     1201 tgccgcagta ttggtgttcg ggcggcatga ttcgatgtat tggtatcccg tcctcgtcaa
     1261 tctgatgatg ttggcggtgt tcggcggcag cctgtttgca gggcagacgg tgattgaaaa
     1321 acttgcgcgg ctgcaacagc ccgacctgcc tgaaaaagcc gtgcgctata cccgccgggt
     1381 aacgcaggtt tggtgcgtat tttttataat caacgggacg cttgccgctt tgttggcacg
     1441 gttggggcga tatgattggt gggcggttta tacaggcgtg attgcctatg tattgatggg
     1501 gatgctgttt gccggcgaat ggctttaccg caaactcgtt ttgaaagtct gaaaccttat
     1561 gtacacttgc acttcctgcg gcgaaaaaca tgaagatatg cccgcaatcg gctttaccgc
     1621 ccccgatccc tataatcaac tcagtgaaga agaacgcatt gcttatcaag cagaatgcga
     1681 ttctgatttc tgcatcatcc gctatcccga ccaaaccgac cgctttatcc gcgcggtgct
     1741 gccgattccg attatcgggc atgaggaaac gctggaatat ggcgtgtggg tgtccgtcag
     1801 cgaaaagagt tttaacgact atcaaagcca ctttcacgac aatccggaaa atgtcgttta
     1861 tttcgggatg atctgcaacc ggctgccccc ttacgaatcc gacaccttcg gtatgcattg
     1921 caatgtcgtt acccaacccg atggtcaacg ccctttgctg caactccatc aaggcagcga
     1981 acatccgctg gtacgcgact tttatcacgg catagaatat gccgaggcac aggcaaggat
     2041 aggggcggta tccgaatcgg attgctcagg ataaaaggac aaaaaggatg aatatgaaat
     2101 acaaagacct gcgcgacttc atcgccatgc tcgagcagca gggcaaactc aaacgcatcg
     2161 cgcaccccgt ttccccgcat ttggaaatga ccgaaatcgc cgaccgcgtg ctgcgcgccg
     2221 aagggccggc gttgctgttt gaaaacccgg ttaagcccga cggtacgcgc tacggttatc
     2281 ctgtgttggc aaacctgttc ggcacgcccg aacgtgtggc gatgggcatg ggcgcggaca
     2341 gcgtgtccaa gctgcgtgaa atcgggcaga cgctggcgta tttgaaagaa cccgaaccgc
     2401 ccaaaggcat caaagatgcg ttttccaaac tgccgctact gaaagacatt tggagcatgg
     2461 cgccgaacgt ggtgaaaaac gcgccgtgtc aggaaatcgt gtgggaaggc gaaaacgttg
     2521 atttgtataa acttccgatt cagcattgct ggccggaaga cgttgcgccg ctggtaacat
     2581 ggggcttgac cgtaacgcgc gggccgcaca aaaaacgcca aaatctcggc atttaccgcc
     2641 aacaactcat cggcaaaaac aagctgatta tgcgctggct gtcgcatcgc ggcggcgcgt
     2701 tggattatca ggaattccgc aaactcaatc ccgatacgcc gtatcccgtc gccgtcgtgc
     2761 tcggctgcga ccctgccacc attttgggcg cggtaacgcc cgttcccgat accttgagcg
     2821 aataccagtt tgccggactg ctgcgcggtt cgcggacgga gctggtgaaa tgtatcggca
     2881 acgatttgca agtgcctgca cgcgcagaaa tcgtgctgga aggtgtgatt catccgaacg
     2941 aaaccgcgtt ggaaggcccg tacggcgacc acacgggcta ttacaacgag caggattatt
     3001 tccctgtgtt tacggtcgaa cgcatcacca tgcgcgaaaa cccgatttac cattcgacct
     3061 acacaggcaa accgcccgat gagcctgccg ttttgggcgt ggcgttgaac gaagtgttcg
     3121 taccgctctt gcaaaagcag ttccccgaaa tcaccgattt ttacctgccg cccgaaggct
     3181 gctcctaccg catggcggtg gtgagcatga aaaaacagta cgccggacac gccaagcgcg
     3241 tgatgatggg ctgctggtcg ttcctgcgcc agtttatgta caccaaattc atcatcgtgg
     3301 tggatgacga tgtgaacgtg cgcgactgga aagaagtcat ctgggcggta accacgcgca
     3361 tggaccccgt gcgcgacacc gttttggtgg aaaacacgcc catcgactat ctcgacttcg
     3421 ccagcccggt cagcggactc ggcggcaaaa tgggcttgga cgcaaccaac aaatggccgg
     3481 gagaaaccga ccgcgaatgg ggacgcgtca tcaaaaaaga ccctgcggtt acggctaaga
     3541 ttgatgggat ttgggaggaa ttggggttgt aggttttacg gtctgccgtc tgaagcgcgg
     3601 gggcgtttca gacggcattt ttgtacgcag gatgtttacg gttctttagg tttgagccac
     3661 tgccattgtt ccagcagggt gtcttcgagg attttctgtt tctctttgcg cgaattgatg
     3721 ccgccggtca gcctgccgta atcgacggta atggacggct tgtccaccgt accggtgatt
     3781 ttcaggggaa tcggtttgtt tttcggatgg acggcgttgc ggataaggac atcttcagac
     3841 aattcctgcg tatccagatt ggtatagccg ttgctggtaa catagaggct gtcggagaag
     3901 agttcggtat cgatgtggcg gctgatgccg tctgaaattt cgctgttgag cgtgaatcgg
     3961 tggaagggtg tgctgggtgc ggcattgtcg gcagttttgc ccgaaatgcc gtttttcagg
     4021 atattgtcca tgtcgatacc gtgccatgca ccgttggaaa tattcagcga caggctgccc
     4081 tgaagcgagc ggataagctc ttttcgggtt tcgccgctcg cggtcaggtc gatgaccgca
     4141 tcgccgttgc cgctgaagct gtggaagccg aacaggtctt gcagcagcgg ttggatttgg
     4201 atgttgcttg cattctgttg caggcggtaa gtggcgggac gggtgttggc gatgctgatg
     4261 ccgccttcgg tatggccgcc gtaaagccct gacttgaaac ggctgagcgc gatatggcct
     4321 ttgtcggcgt ggaggtaggt ttccatatcg tccagttgca ggccgggaag ttggactttt
     4381 ccgattttca ggtgcgcctc gatgtcgccg gacagcttgg cgagggtgtc gggaaatatt
     4441 ttgccgtttt gttgccgcac gtcgtcaaga tagggggtca ggttcaattt ttgcagtgcg
     4501 acggcggctt ccagatgcgg tgcgtcttca tgtgtgtatc tgaatttcgc ggcaacggtt
     4561 tggcggtcga atgtgccgtt taattcggca ttccaatttt gcagattcgg tacggacagc
     4621 gaaccgtcga gccggctgat gaaacggggt tgcggcaggc ggttgacggt atcctgaagg
     4681 gtcgatacat acaggcgcgg cgcgtccagc cctttgtttt ccgtccatac gagcggcgaa
     4741 ttgagggaga agttggtctg gtggcgcggt gttttgaagc tgccggagat ttcggcgttg
     4801 ccgatgttgg cgatgccgga gtgaaggttg gctttgtcga gtttgaacga accgtcccat
     4861 tgggcatatt cgccgccggc ggtaaatgcg ccgttgacgg tttcaatttt aatgctgtta
     4921 tttctgagtg ccagcgtagg gatttgggcg gtcaggtgga ggttgcggaa ggaagtgtct
     4981 gcacgcaggc cgaggccggc ggcatccgct ccgccggcgt tgaagcggac agaagggctg
     5041 ccggtggtgg aaatggtaat gccgtgtccg tccagcgaag tggaagcttc aaaatggaac
     5101 ggtgagattt tgggcgtgcc gatgccgtct gaaaggaaca gccccctgct tttccacggg
     5161 acggacagct ttccccaaac cagtatgccc gaactttcaa acggctgccc cgacgaatcg
     5221 ggggattgca ggttgaggtt gatttccttc aggataagct gttcctgcag gaaattgagg
     5281 cggacggtgc tgttttcgac gataatgcgg ttgactgagg cttggcgttt ttggctgtcg
     5341 atcaggtctt ggatgttcca aacacctttc ccgtcgcgcg tcagggcaag ttccgcactc
     5401 gaaaccaccc atttttcaat ctgtatctga tccgaccaca ggtttttcca gctcaatccg
     5461 attttggttt cttggacgga aacggcagtc tggtcgccgc cgggttcggt aatggtcagg
     5521 tttttcagga tgacggtcgg ccggggcagg agcctgcgct gaatgtccgc atcaaacgag
     5581 attttccggt gtgtgtgtgc aatgctttgt tggaggcggc tgcggatgtt ttcaggcgtg
     5641 aaggtgcgat atacggaagc gtgcagcccg actgccgcca aaagcagtat cgtcagcacg
     5701 gccaccgcat atttcagacg gtatttgtgg aaaaccgata ataaatccat agcccgaaca
     5761 atctgtaaaa cacgccacag tataacacgg cttgcaaaaa tcctattttg ggcaggccgt
     5821 ttcttgtgtc aggaggaaat atgattattg tcatgagcag gcgtgccgcc gaagcggaca
     5881 ttgccggcgt tgtcgccttt atccgcagca gaggtctgcg agaacacatt tctcacggcg
     5941 acgagcgtac cgtcatcggc gcaatcggcg acgatagggt tttgagcgtc agggaggtgc
     6001 agacgctgcc ggaggtcgag aaagccgtcc gcattttgga tacatggaaa accgtcagtc
     6061 gggaaaatcg ggcggaagac agccgcgttg ccgccaaagg cgtggctttc ggcggcgggg
     6121 aaaccgtctg tatcgccgca gaaccgtcag tatggcgcaa tgcggatgca gtgtttctgg
     6181 atccgttttt cacttcggca aacttatacg acacttcaag tgcggatgaa gggcgaggac
     6241 ggtgcagacg gttggcggaa cagaccgcat cggcgcatgg cgcagggaaa cccgtattgg
     6301 tgcgcgtccg caacgtccgc catgtcgaag cggctttgaa tgcgggggcg gacatcctgt
     6361 atttgggcgg cgggctgatg tccgatcttg ccgtattgaa tgaagccgga agcctgaaca
     6421 ttcccttggt gctgtgtaaa gacaagcacc attctgccga agattggttg aatgccgcag
     6481 aatatgtcgt ctcgcgcggc aaccgccacc tgattctggg cgagtcgggc gtgttgagcc
     6541 ataccaaaga ccatccctac cgtttggatg tcgaatccat cgtgaaagtc cgccaaatca
     6601 gccatctgcc cgtgattgcg aatattacgg gattatggaa ccgcgatatg ccgcaggaaa
     6661 tcctgtacgg cttggcaaag gcggcaggcg cgtgcggaat cgtcggaacc tgttttgaaa
     6721 agtcgggcgg atagcaggca taccggcaga ttcaaaggcg gagcagacat tcggacaaca
     6781 tgccgtctgc cgcccgaata gcggtgccgt ctgaagcgca caagacggtt tcagacggca
     6841 tataa
//
LOCUS       DBBZXW010000103         6718 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.103, whole genome shotgun sequence.
ACCESSION   DBBZXW010000103 DBBZXW010000000
VERSION     DBBZXW010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6718
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.103"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            637..2085
                     /gene="gnd"
                     /locus_tag="ACJJD2_001785"
     CDS             637..2085
                     /gene="gnd"
                     /locus_tag="ACJJD2_001785"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HGG7580270.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDERAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPTWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2148..3419
                     /gene="waaA"
                     /locus_tag="ACJJD2_001786"
     CDS             2148..3419
                     /gene="waaA"
                     /locus_tag="ACJJD2_001786"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HGG7580271.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRKSGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGDRQVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACWHALASGAAVQVESADAWREAVEKTLSSKGGGMQMQ
                     VRVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3460..3909
                     /locus_tag="ACJJD2_001787"
     CDS             3460..3909
                     /locus_tag="ACJJD2_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HGG7580272.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGLVSCEARRE
                     VENAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISW"
     gene            3942..4916
                     /locus_tag="ACJJD2_001788"
     CDS             3942..4916
                     /locus_tag="ACJJD2_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HGG7580273.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGIKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPKGDEKEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLSFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            4985..5060
                     /locus_tag="ACJJD2_001789"
     tRNA            4985..5060
                     /locus_tag="ACJJD2_001789"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5018..5020,aa:Lys,seq:ttt)
     gene            5432..6685
                     /gene="murA"
                     /locus_tag="ACJJD2_001790"
     CDS             5432..6685
                     /gene="murA"
                     /locus_tag="ACJJD2_001790"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HGG7580274.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGV
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVEQLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
BASE COUNT         1553 a         1633 c         1924 g         1608 t
ORIGIN      
        1 gttcgtggga atgacgcggt acaggtttcc gttacgtatc cccatccgaa agtttactta
       61 tacacaagca atccaaagtt atctgactga aatattgtga gatttacccg caaatctcat
      121 tttctccacc acttatacac aaactcggat gcacactctg ccaatatgca gagaaaaaga
      181 cattcgtgcc gttaacttac tattcccaca cgttccaaac acatttccct ctcaaacctc
      241 cacagtattc ccgttcttaa aggcgccagc agccattcgg taaagaaaag taggatgcca
      301 tctgcacaac aagcaaactg tccacaaaaa ctattcttca tgaaaaacaa tccacaggta
      361 tgcacaaaag ggaatccgcc ttaccgacac ccttttaaaa cggcaatctc gatgattttt
      421 aaaataaaaa aaagttaccc acagaaaatg tctcctatca atataatcat cgttttatta
      481 tttaaatttt atattttatt tataagcctt cagggaaacg cacggtaaag cgtaaaggca
      541 tcttttcaaa aaattaaaaa gttaaggatt gttaaacaag tgtaaatcag gtagagttgc
      601 ggtcgataaa ttaaatctat aacggagctt cctgcaatga aaggcgatat tggtgtaatc
      661 ggtttggcgg ttatggggca aaacctgatt ttgaatatga acgattgcgg atttaaggtt
      721 gtcgcctaca accgaacaat cggtaaggtg gacgaatttt taaacggcgc ggctaaggga
      781 acggatattg tcggcgcgta ttccctgcaa gacttggtcg ataagctggc aaaaccgaga
      841 aaaatcatga tgatggttcg cgcaggttcg gtggttgacg actttatcga acaactgctt
      901 ccgttgttgg aagaaggcga catcattatc gacggcggca atgccaatta ccccgacacg
      961 acacggcgga cacattacct tgccgaaaaa gggattttgt ttgtcggcgc gggcgtatcc
     1021 ggcggcgaag aaggcgcgcg gcacggcccg tctatcatgc cgggcggaga tgagcgcgct
     1081 tgggaagccg tcaaaccgat ttttcaggcg attgccgcca aaacgccgca gggcgaaccg
     1141 tgttgcgact gggtcggcag ggacggcgcg gggcattttg tcaaaatggt gcataacggc
     1201 atcgaatacg gcgatatgca gttgatttgc gaagcgtacc agttcatgaa agacggcttg
     1261 gggctgtctt acgacgaaat gcaccgcgtg tttgccgagt ggaacaaaac cgagctggat
     1321 tcttatctga ttgaaatcac agcggcaatt ttgggctata aggacgaagg cggcgaaccg
     1381 ctggtcgaga aaatcctcga tacggcaggg caaaaaggca cgggcaaatg gacgggcatc
     1441 aatgctttgg atttgggtat tccgttgacg ctgatttccg aagcggtatt cgcccgctgc
     1501 gtttcgtcgt tcaaagaaca gcgcgtgcag accggcaagc tattcgcccg aaccgttacg
     1561 cccgtcgaag gcggcaaaca agaatgggtt gaggcgttga gacaggccct gcttgcatct
     1621 aaaatcattt cctacgcaca aggcttcatg ctgatccgcg aagcgggcga aagctacggc
     1681 tgggatttgg actacggcaa cactgcgctg ctgtggcgcg aggggtgcat catccgcagc
     1741 gcattcttaa gcaatatccg cgacgcgtat gaaaacaatc ccgatttggt gttcttgggt
     1801 gcggatccgt atttcaaaaa tattttggaa aactgcctgc cgacgtggcg caaggtggtt
     1861 gccaaggcgg tcgaatgcgg catccctatg ccttgcatgg cttcggcgat tacgttcttg
     1921 gacggctaca cgaccgaacg tctgcctgcc aacctcttgc aggcacagcg cgactacttc
     1981 ggcgcgcaca cttacgaacg caccgacaaa ccgcgcggcg agtttttcca taccaactgg
     2041 acgggcaagg gcggagatac cgcttcgaca acctacgata tttgattccg ttgccgaaat
     2101 gccgtccgaa ccgttcggac ggcatttgtt ttgcaggaaa tagaaagatg ttccaatggc
     2161 tttatgatgt attgtggctg cttgcgccga tatggatacg gcgttatttg gacaaacgct
     2221 ccggaagtgc cccggcatat cgggcgcatc gggacgagcg tttcggcaag ccgtatccga
     2281 atcccgttac cggcgcggtt tggatacacg ccgtttcggt cggagaaacg cgtgccgccc
     2341 agcccttgat acgcgagttg cggcagcgtt ttcccgatgc gccgctgctg atgacgcaga
     2401 tgaccccgac gggacgggaa accgcgcaag ttctgtttcc tgatgcacaa tgccgttatc
     2461 ttccgtatga caaaaaaacg tgggtacggc agtttttgcg cgaacaccgc ccgatgttcg
     2521 gcattttgat ggaaaccgaa atctggccca acctgatgac ggagtgccgg aaatcgggcg
     2581 ttccgctgtt tttggcgaat gcgcggctgt cggaaaaatc gctaaacggt tatctgaaag
     2641 tccgccgcct gatccgtcct gccgccgctt cgctgacggg ttgtctggcg cagacggagg
     2701 cggatgcggc gcggttggcg aaattgggcg cggcatccgt gcaggtgtgc ggcaatacca
     2761 aatacgacct gatgccgtcg gaacagatga aaacgctggc ggggcagttt gaaaaacgca
     2821 tcggagaccg gcaggttgcc gtgtgcggca gcacgcgcgt ttatcggggt gaagacgagg
     2881 cggaaaaact gctggcggcg tggcaacaat atcgcggcga tgcgctgctg gtcgtcgtgc
     2941 cgcgccatcc cgagcatttt cagacggtat ttgaaacggc aaaacgcttc gggtttaagg
     3001 ttcagcggcg cagcgacggt ttgccggtcg aacctgatac gcaggtgtgg ataggcgaca
     3061 gtatgggcga gctgtatgcg tattacttgt gcgccgatgt cgcttttgtc ggcggcagtc
     3121 tggtcgattc gggctgtcag aacattatcg aaccgctttc ctgcggcgtt ccgacgatat
     3181 tcggcttttc aacctacaat ttttccgaag cctgctggca cgccttggca tcgggggcgg
     3241 cggttcaagt cgaatcggcg gatgcgtggc gtgaagccgt tgaaaaaacc ttatcgtcca
     3301 aggggggcgg aatgcagatg caggtgcgcg tggacggctt tatcgcacaa catcgcggag
     3361 cgggcgcgag aatcgccgag gcggtgcggg aagcggtatg cggacatcgg gggcgatagt
     3421 gatacaatcc gtatccgagt tttccgtttg gagcatcgta tgagtattta tgccgtcgcg
     3481 cacatcgttc atctgtattg cgctattgcc tttgtcggcg gcgtgttttt tgaagtgctg
     3541 gttttgtccg tcctgcatac gggactggtg tcgtgcgagg cgcggcgcga agtggaaaat
     3601 gcaatgtctt accgcgccgt cagggtgatg ccgtttgtgg tcggactgct gttcgccagc
     3661 ggcatcgtga tggcggcaaa ccgctatctt tctatattgg gcgaaccgtt tgccacttcc
     3721 ttcggtacga tgctgacgct gaaaatcctg ttggcgttca gcgtgttggc gcacttcgcc
     3781 atcgccgtcg tcaaaatggc gcgttccaca ctgaccgtcg gctggtcgaa atacatacac
     3841 accgtcgtct ttacccatat gctgctgatt gtctttttgg caaaagcgat gttttatatc
     3901 agctggtaac acaattacat ttcaaatcag gagattgaac catgacagaa tatcccggca
     3961 tcgggtcgcc gttgttttac ggcgtttttt ttgcggcagt gctggtcatg attgccttgg
     4021 atatgttttc gctgaagaaa aacggcagcc ataaagtcgg catcaaagaa gccttggcat
     4081 ggagcggctt gtgggttgcc gtatcctgcc tgttcgcggg ctggctgtat ttcgaactcg
     4141 ccggcaatcc cggctacggc gcggcagtcg caaaagaaaa agtattggaa ttctttaccg
     4201 gctacatttt ggaaaaatcg ttggcagtcg ataatatttt cgtgttcctg atgatattcg
     4261 gctacttcaa agtcgcaccg cagtttcagc accgcgtgct gctgtacggc gtattgggcg
     4321 cattggtatt gcgcaccgtc atgattttcg tcggcgcggc actggttcgg cagttcgagt
     4381 ggattctgta tctgttcggc gcgttcctgc tctataccgg catacacatg atgaagccca
     4441 aaggcgatga gaaagaggat ttggcaaaca gcaggctgct gaatgccgtc aagaaagtcg
     4501 ttccggtcgg cacggaattt cacggcgaga aattttttac cgtcgaaaac ggcaaaaaaa
     4561 tcgccacgcc gctgtttttg gtgctggtca tgattgaatt gagcgatgtc gtgtttgccg
     4621 tggacagtat tcccgccgtc tttgctgtta ccaccgatcc gtttatcgtg ctgacctcca
     4681 atattttcgc cattttgggt ttgcgggcga tgtatttcct gctggcggat gtggcggaac
     4741 gctttatctt cctgaaatac ggcttggcat tcgtgttgag ttttatcggt gtgaaaatgc
     4801 tggtaatgca ttgggtgcat atcccgattt ccgtttcgct gtcggtcgtg ttcggcgcgt
     4861 tgggtgcatc gatactgacc tcgttaattt atacgaaaaa acagcctgat aaataaaatg
     4921 ccgtctcaac gccgacaaaa tggttgacag catcaggctt gatgtataga atttcgagct
     4981 tgtcgggtcg ttagctcagc cggtagagca gcggactttt aatccgttgg tcgagcgttc
     5041 gaatcgctca cgacccacca gataaaacaa aaaaagctga gttttcaaaa ctcggctttt
     5101 ttgtcttccg acaatccttg ttcggaaagc gcggcatttc gtcaaattct ttggtgcggc
     5161 ttccgtattt ttcccgaaaa tcccttataa ttccgcctct gcaaccttca tcgggtgatg
     5221 ctttatgcgt tgtcccaaga attgaaatat tatagtggat taacaaaaac cagtacggta
     5281 ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg ctgaagcacc aagtgaatcg
     5341 gttctgtact atctgtactg tctgcggctt cgccgccttg tcccgatttt tgttaattca
     5401 ctatacaagt acccaccagg aaagaacaaa cgtggacaaa ctgaaaatct ccgcaaacgg
     5461 cccgctcaac ggggaaataa cggtctcggg cgcgaaaaac gcggcattgc cgctgatgtg
     5521 cgcgggtttg ctgacatcgg gtacgttgcg cctgaaaaat gtgcctatgc tggcagatgt
     5581 gaaaaccacg caaaagctgc ttcaggggat gggcgcgcgc gtcctgaccg acaatatcag
     5641 cgaatttgaa atcaacggcg gtacggtaaa caatacgtgc gccccttacg agttggtccg
     5701 gacgatgcgc gcttcgattt tggtgctggg cccgacgctg gcgcgtttcg gcgaggcgca
     5761 agtcagcctg ccgggcggct gcgccatcgg ttcgcgcccc gtcgatcagc atttgaaagg
     5821 cttggaagcg atgggtgctg agattgttat cgaacacggt tacgtcaagg ccaaaggcaa
     5881 actcaaaggt acgcgcgtgg cgatggatgt cgttaccgtc ggcggcacgg aaaacctgct
     5941 gatggcggcg acgctggcgg aaggtacgac ggttttggaa aactgcgcca tcgagcctga
     6001 agtggtcgat ttggcggaat gcctggtcaa aatgggcgcg aaaatcagcg gcatcggtac
     6061 gtccacgatg attgtggaag gtgtggacga gctgcacggc tgcgaacaca gcgtcgtccc
     6121 cgaccggatt gaagcgggga cgttcctgtg cgcggtggcg ataaccggcg gcagggtggt
     6181 tttgcggaat gccgccccga aaacgatgga agtggtgttg gacaaactgg ttgaggcagg
     6241 tgcggtgatt gaagcgggcg acgattggat cgccatcgat atgcggcagc gtccgaaggc
     6301 ggtggacatc cgcacggtcg tccaccccgg cttccccacg gatatgcagg cgcagtttat
     6361 ggcattgaat gccgtggcag agggaagctg ccgcgtggtg gaaacgattt ttgaaaaccg
     6421 ctttatgcac gtccccgagt tgaaccggat gggggcgaac atcacaaccg agggcaatac
     6481 ggcatttgtg cagggtgtgg aacagctttc cggcgcggtc gttaaggcga cggatttgcg
     6541 tgcgtccgca agcctcgtta tcgccggttt ggcggcgcgc ggcgaaaccg tggtcgaaca
     6601 gatttaccac ttggatcgcg gttatgaaaa tattgaaaaa aaactcggca gcgtcggcgc
     6661 gaaaatcgag cgcgtatccg gctgatcggg ttgcgatgcc gtctgaagcc ttcagacg
//
LOCUS       DBBZXW010000104         6538 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.104, whole genome shotgun sequence.
ACCESSION   DBBZXW010000104 DBBZXW010000000
VERSION     DBBZXW010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6538
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.104"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..399)
                     /gene="murJ"
                     /locus_tag="ACJJD2_001791"
     CDS             complement(<1..399)
                     /gene="murJ"
                     /locus_tag="ACJJD2_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015648 - lipid-linked peptidoglycan
                     transporter activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HGG7580275.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEAAEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAQDADKFQLSIDLLRI"
     gene            complement(399..590)
                     /locus_tag="ACJJD2_001792"
     CDS             complement(399..590)
                     /locus_tag="ACJJD2_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580276.1"
                     /translation="MLEINRNPAILLHFRVLIQFAAGKGRFRFGKPLQTASNPMPSEA
                     VSVVQYAPLPQTGTTVEEQ"
     gene            617..1315
                     /locus_tag="ACJJD2_001793"
     CDS             617..1315
                     /locus_tag="ACJJD2_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7580277.1"
                     /translation="MKSRQLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLPLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(1372..2376)
                     /gene="amgK"
                     /locus_tag="ACJJD2_001794"
     CDS             complement(1372..2376)
                     /gene="amgK"
                     /locus_tag="ACJJD2_001794"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HGG7580278.1"
                     /translation="MQRQTELKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDFGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            2446..4854
                     /locus_tag="ACJJD2_001795"
     CDS             2446..4854
                     /locus_tag="ACJJD2_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HGG7580279.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMEIEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            4956..6002
                     /locus_tag="ACJJD2_001796"
     CDS             4956..6002
                     /locus_tag="ACJJD2_001796"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7580280.1"
                     /translation="MMKIKALMIAAALLAAADVHAAPQKAKTASAKVAKVAKVAKVAK
                     VAKVAKVAATAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKE
                     AQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRD
                     FADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKA
                     DSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFE
                     EAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVN
                     LLRDLHSGAYVDIR"
BASE COUNT         1637 a         1983 c         1699 g         1219 t
ORIGIN      
        1 aatccgcagc aaatcgatgg aaagttggaa cttgtccgcg tcttgggcaa agccgggtgc
       61 ggaaacataa atcacccaag gcgcggcgag tatgcccagc gcggtaacga tgaccagcac
      121 aaacgacagc atccccgcca catggcggat aaaagcctcc gccgcctctt tagaacgcgt
      181 ttccttatat tccgccaaaa tcggcacaaa cgcttgggca aacgccccct ccgcaaacac
      241 gcggcgcagc aggttgggca gtttgaacgc gacaaaaaac gcatccgtcg ccatacccgc
      301 gccgaatgcc cgcgcaatga ccgtatcgcg cacaaatccc aaaacgcgcg acaccatcgt
      361 caggctgccg acttttgcca aagctcccag catattcatc attgttcctc aacagtcgta
      421 cccgtttggg gcaacggcgc gtattgtacg acagaaaccg cttcagacgg catcgggttt
      481 gatgccgtct gaagcggttt cccgaaacga aaacgtcctt ttccggcggc aaactgtatc
      541 aacacgcgga aatgcaataa aatagccgga ttccgattga tttccaacat ctgtttccaa
      601 catcacggag agccgtatga aatccagaca actcgccctc ggcgttgccg ccctgttcgc
      661 ccttgccgcg tgcgacagca aagtccaaac cagcgtcccc gccgacagcg cgcctgccgc
      721 ttcggcagcc gccgccccgg cagggctggt cgaagggcaa aactataccg tccttgccaa
      781 cccgattccc caacagcagg caggcaaagt cgaagtcctt gagtttttcg gctatttctg
      841 tccgcactgc gcccacctcg aacctgtttt gagcaaacac gccaagtctt ttaaagacga
      901 tatgtacctg cgtaccgagc atgtcgtttg gcaaaaagaa atgctgccgc tggcacgcct
      961 cgccgccgcc gtcgatatgg ctgccgccga cagcaaagat gtggcgaaca gccatatttt
     1021 cgatgcgatg gtcaaccaaa aaatcaagct gcaagagccg gaagtcctca aaaaatggct
     1081 gggcgaacaa accgcctttg acggcaaaaa agtccttgcc gcctacgagt cccccgaaag
     1141 ccaggcgcgc gccgacaaaa tgcaggagct gaccgaaacc ttccaaatcg acggtacgcc
     1201 cacggttatc gtcggcggta aatataaagt tgaatttgcc gactgggagt ccggtatgaa
     1261 caccatcgac cttttggcgg acaaagtacg cgaagaacaa aaagccgcgc agtaagcccg
     1321 tttgaaaaat gccgtctgaa acttggtttt cagacggcat tttgattggg tttaaaacgt
     1381 aaagcccgtt tccagttctt catcgccgac cagttcgacc aagagcgcgt agagcggggc
     1441 gagttcggca taacggcgcg atacgcggcg caggtaattg aggaaacgcg ggatttcggg
     1501 acggtatttg tctttgccgt cgcggtagta caggcgtgcg aagatgcctg caaccttcaa
     1561 gtgccgctgc acgcccatcc attcgaacca gcggtaaaac tcgtcaaacg cttcggggac
     1621 gggcaggccg gcagcccgcg ccttttccca gtagcggata accaagtcca agacaaattc
     1681 ttcttcccat tcgataaagg catcgcgcaa cagcgacacc aaatcgtagg aaatcgggcc
     1741 gtaaagcgcg tcttggaagt ctaaaacgcc cggcctgccg cgcgtcagca tcaggttgcg
     1801 gacgataaag tcgcggtgca catagacttt gggctgcgcc aacaggggcg gcagcagcgt
     1861 atcgacggtt tgctgccaaa gttggcgttg tttgaatgtt aattcgcgcc ccaattcttt
     1921 tgcgacaaac cattccggga acaggttgat ttcgcgcaac atcgtttcac ggtcatattc
     1981 gggcaaaacc ccttcacggc tcgccttctg caattcgacc aactcgccga ttgcctccaa
     2041 aagcagggct ttgtgcgccg tttcgccctg ttcctgaagc attgcggtca aaaacgtcgt
     2101 attgccaaag tcgttcaata ccacaaaccc cagatccgtg tccgcgtgca atacctgcgg
     2161 cacattgacc atgtcaaaca gtttctgcac tttcaaataa ggtgcgacac tcatcttgtc
     2221 gggcggtgca tccatgcaga cgacactgct gccgtctgaa aacgttgcac ggaaatagcg
     2281 gcggaaatca gcatccgccg ccgcaaaagt cagatcgaag tcccgttcgg gataaacggt
     2341 ctgaagccaa tttttcagtt cggtttgccg ttgcataaca gtactaaagc atttcaggtt
     2401 acaataaacg ctattctaac tggcaaaccg acttgagggg cgattttggc tcgtttattt
     2461 tcactcaaac cactggtgct ggcattgggc ctctgcttcg gcacgcattg cgccgccgcc
     2521 gatgccgttg cggcggagga aacggacaat ccgaccgccg gaggaagcgt tcggagcgtg
     2581 tccgaaccca tacagcctac cagcctgagc ctcggttcga cctgcctgtt ttgcagtaac
     2641 gaaagcggca gccccgagag aaccgaagcc gccgtccgag gcagcggcga agcatccatc
     2701 cccgaagact atacgcgcat tgttgccgac aaggtggaag gacagtcgca ggtgcaggtg
     2761 cgtgccgaag gcaacgtcgt cgtcgaacgc aaccggacga ccctcaatac cgattgggcg
     2821 gattacgacc agtcgggcga caccgttacc gcaggcgacc ggttcgccct ccaacaggac
     2881 ggtacgctga ttcggggcga aaccctgacc tacaatctcg agcagcagac cggcgaagcg
     2941 cacaacgtcc gcatggaaat cgaacaaggc ggacggcggc tgcaaagcgt cagccgcacc
     3001 gccgaaatgt tgggcgaagg gcattacaaa ctgacggaaa cccaattcaa cacctgttcc
     3061 gccggcgatg ccggctggta tgtcaaggca gcctctgtcg aagccgatcg ggaaaaaggc
     3121 ataggcgttg ccaaacacgc cgccttcgtg ttcggcggcg ttcccctttt ctatacgcct
     3181 tgggcggact tcccgcttga cggcaaccgc aaaagcggcc tgcttgttcc ctcactgtcc
     3241 gccggttcgg acggcgtttc cctttccgtt ccctattatt tcaaccttgc ccccaatctc
     3301 gatgccacgt tcgcgcccgg cgtgatcggc gaacgcggcg cggtctttga cgggcaggta
     3361 cgctacctgc ggccggatta tgccggccag tccgacctga cctggctgcc gcacgacaaa
     3421 aaaagcggca ggaataaccg ctatcaggcg aaatggcagc atcggcacga catttccgac
     3481 acgcttcagg cgggtgtcga tttcaaccaa gtctccgaca gcggctacta ccgcgacttt
     3541 tacggcaaca aagaaatcgc cggcaacgtc aacctcaacc gccgtgtatg gctggattat
     3601 ggcggcaggg cggcgggcgg cagcctgaat gccggccttt cggttctgaa ataccagacg
     3661 ctggcaaacc aaagcggcta caaagacaaa ccgtatgccc tgatgccgcg cctttccgcc
     3721 gattggcgca aaaacaccgg cagggcgcaa atcggcgtgt ccgcacaatt tacccgcttc
     3781 agccacgaca gccgccaaga cggcagccgc ctcgtcgtct atcccgacat caaatgggat
     3841 ttcagcaaca gctggggtta cgtccgtccc aaactcggac tgcacgccac ctattacagc
     3901 ctcaaccgct tcggcagcca agaagcccga cgcgtcagcc gcactctgcc cattgtcaac
     3961 atcgacagcg gcgcaacttt tgagcggaat acgcggatgt tcggcggcgg agtcctgcaa
     4021 accctcgagc cgcgcctgtt ctacaactat attcctgcca aatcccaaaa cgacctgccc
     4081 aatttcgatt cgtcggaaag cagcttcggc tacgggcagc tctttcgcga aaacctctat
     4141 tacggcaacg acaggattaa caccgcaaac agcctttccg ccgccgtgca aagccgtatt
     4201 ttggacggcg cgacggggga agagcgtttc cgcgccggca tcggtcagaa attctatttc
     4261 aaggatgatg cggtgatgct tgacggcagc gtcggcaaaa aaccgcgcaa ccgttccgac
     4321 tgggtggcat ttgcctccgg cagcatcggc agccgcttca tcctcgacag cagcatccac
     4381 tacaaccaaa acgacaaacg cgccgagaac tacgccgtcg gtgcaagcta ccgtcccgca
     4441 cagggcaaag tgctgaacgc ccgctacaaa tacgggcgca acgaaaaaat ctacctgaag
     4501 tccgacggtt cctattttta cgacaaactc agccagctcg acctgtccgc acaatggccg
     4561 ctgacgcgca acctgtcggc cgtcgtccgt tacaactacg gttttgaagc caaaaaaccg
     4621 atagaggtgc tggcgggtgc ggaatacaaa agcagttgcg gctgctgggg cgcgggcgtg
     4681 tacgcccaac gctacgttac cggcgaaaac acctacaaaa acgctgtctt tttctcactt
     4741 cagttgaaag acctcagcag tgtcggcaga aaccccgcag acaggatgga tgtcgccgtt
     4801 cccggctaca tccccgccca ctctctttcc gccggacgca acaaacgacc ctgaccgtcg
     4861 gaaacccggc aggagcaccg ttcccgcaca agacggcatt ccaccgacaa ccccaaaccc
     4921 gccatcaaag gtaggattca aacgataagg aaagaatgat gaaaatcaaa gccctgatga
     4981 ttgccgccgc attgctggca gcagccgatg tccacgccgc accgcaaaag gcaaaaaccg
     5041 catccgccaa agttgccaaa gttgccaaag ttgccaaagt tgccaaagtt gccaaagttg
     5101 ccaaagttgc cgccacggcg caaaaagaag ccgcacccgc acaacagcag ggcggtatcc
     5161 gcttttcaga cggcattgcc gccgttgccg acaacgaagt catcacgcgc cgccggcttg
     5221 ccgaagccgt tgccgaagcc aaagccaacc tgcccaaaga ggcgcagata agcgaatccg
     5281 agctgtcccg acaggtgctg atgcagcttg tcaaccaatc cctgattgta caggcgggca
     5341 aacgccgcaa cattcaagca agcgaagcgg aaatcgatgc cgtcgtcgca aaaaattccg
     5401 ccctcaaaaa cctcagcccc gcccaacgcc gcgattttgc cgacaacatc attgccgaaa
     5461 aagtccgcca gcaggcagtg atgcagaaca gccgcgtgag cgaagctgaa atcgatgcct
     5521 tcctcgagca ggcgcaaaaa caaggcatca ccctgcccga aggcgcaccg ttgcgccaat
     5581 accgcgccca acacatcctg attaaagccg acagcgaaaa cgccgccgtc ggcgcggaaa
     5641 gcaccatccg caaaatctac ggagaggccc gcagcggcac agacttttcc agcctagcgc
     5701 gccaatattc gcaagacgcg agcgcgggca acggcggaga tttgggctgg tttgccgacg
     5761 gcgtgatggt tcccgccttt gaagaagccg tccacgcgct caaacccgga caggtcggcg
     5821 cgcccgtccg cacccaattc ggctggcata tcatcaaatt gaacgaagtg cgcgatgccg
     5881 gcacacctca ggaacgtatc cgcaattccg tgcggcaata catcttccaa caaaaagccg
     5941 aacaggcaac cgtcaacctg ttgcgtgacc tgcattccgg cgcgtatgtc gacatccgct
     6001 aaggcggttt gaagcaaaaa gccataccga tcggcaaaaa tccgggcggt atggcttttt
     6061 ggatttcgag ttacttttac accgtcattc atcattcccg cgaaagcggg aatctagaaa
     6121 cgaaaagtaa caggaattta tcgggaatgg ctggagttta aaggactgga ttcccgccgt
     6181 cgcgggaatg acgggatttt gggttgtggt aatttatcgg aaaaacaaaa aaacctatgc
     6241 cgtcattccc gagcaggcgg gaatccggtt atttaaaact gcagaaattt atccgaagca
     6301 acaacaatct ttccatcgtc attcccgcgt aggcgggaat ctaggacgta gaatctaaag
     6361 aaaccgtttt atccgataag tttctgtacc gaagaatctg gattcccgct ttcgcgggaa
     6421 tgacggcgca taagttcccg tgcggacaga cctagattcc cacctgcgtg ggaatgacga
     6481 ttcagaagtt gcctgaaacc taaaaaactg aaaccgaacg agccggattt ccgctttc
//
LOCUS       DBBZXW010000105         6520 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.105, whole genome shotgun sequence.
ACCESSION   DBBZXW010000105 DBBZXW010000000
VERSION     DBBZXW010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6520
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.105"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            106..489
                     /locus_tag="ACJJD2_001797"
     CDS             106..489
                     /locus_tag="ACJJD2_001797"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HGG7580281.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            603..1076
                     /locus_tag="ACJJD2_001798"
     CDS             603..1076
                     /locus_tag="ACJJD2_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HGG7580282.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            1202..2305
                     /gene="mnmA"
                     /locus_tag="ACJJD2_001799"
     CDS             1202..2305
                     /gene="mnmA"
                     /locus_tag="ACJJD2_001799"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HGG7580283.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYEGDVCLGGGIIQSTDKPVIITR"
     gene            2376..4046
                     /locus_tag="ACJJD2_001800"
     CDS             2376..4046
                     /locus_tag="ACJJD2_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HGG7580284.1"
                     /translation="MKKIWLDSYEKGVSAEIDITQYNSVSDVFRQSVEKFADQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPVALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETISFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            4158..5792
                     /locus_tag="ACJJD2_001801"
     CDS             4158..5792
                     /locus_tag="ACJJD2_001801"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HGG7580285.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            6020..6325
                     /locus_tag="ACJJD2_001802"
                     /pseudo
     CDS             6020..6325
                     /locus_tag="ACJJD2_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227159.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1695 a         1790 c         1619 g         1416 t
ORIGIN      
        1 ggtgcttcag caccttagag aatcgttctc tttgagctaa ggcgaggcaa cgccgtactg
       61 gtttttgtta atccactata ttgagaacat tttgaaagga taccgatgga accttcctcc
      121 tacgcggcag aaaaaaaagg caaaggcggc atcaggcgcg tcattaacgc attcggctat
      181 tcgatagacg gcatcgccgc cgcctaccgt tacgaagcgg cattccgtca ggttttgtgg
      241 ctgaacgtac tgctggtgtg cgcggcattt ttttgggttt ccgaaaccgc cgtccgcctg
      301 ccgttgatta tcgcgtcttt tgtgtcggtc attgtcgaac tgttcaacac cgccgtcgaa
      361 gctgccgtcg atcatacttc gaccgaaaaa cacgagctgg ccaaacgcgc caaagacgca
      421 ggttctgccg cacaattgtt cgcgatgctg atgttggcgg cggtttggct gtctgccctg
      481 ttcgggtaaa acgcttgcag caggatttgt aatcctttag gattagtatg tggtatttat
      541 tattcactta atccactata agattaagca cattccccgt ctgatattca aggagcagaa
      601 agatgaaaaa attattggca gccgtgatga tggcaggttt ggcaggcgcg gtttccgcgg
      661 ccggagtcca cgtcgaggac ggctgggcgc gcaccaccgt cgaaggtatg aaaataggcg
      721 gcgcgttcat gaaaatccac aacgacgaag ccaaacaaga ctttttgctc ggcggaagca
      781 gccccgttgc cgaccgcgtc gaagtgcata cccacatcaa cgacaacggc gtgatgcgga
      841 tgcgcgaagt caaaggcggc gtgcctttgg aggcgaaatc cgttaccgaa ctcaagcccg
      901 gcagctatca cgtgatgttt atgggtttga aaaaacaatt aaaagagggc gacaagattc
      961 ccgttaccct gaaatttaaa aacgccaaag cgcaaaccgt ccaactggaa gtcaaaaccg
     1021 cgccgatgcc ggcaatgaac cacggtcatc accacggcga agcgcatcag cactaatctg
     1081 ctgaaaatat ttgaaatgcc gtctgaaaaa gcccgggctt tcagacggca tttttatgac
     1141 tgcctttaaa atgtgttaaa atccgccttt aaaaaccgcc gtttccaacc atattctacg
     1201 catgaatacg acagcaaacc cttccaatat catcgtcggg ctctccggcg gtgtcgattc
     1261 ttccgtaacc gccgccctgc tcaagcagca gggttatcaa gtgcgcggtg tgttcatgca
     1321 gaactgggaa gacgacgaca acgacgaata ttgcagcatc aaacaggatt cgtttgatgc
     1381 catcgccgtt gccgatattg tcggcatcga catcgacatc gttaatttcg ccgcgcaata
     1441 taaagacaaa gtctttgctt attttcttca ggaatacagt gcggggcgca cgccgaatcc
     1501 cgatgtgttg tgcaacgccg aaatcaaatt caaatgcttt ttggattacg ccgtagggca
     1561 gggcgcggat accatcgcca ccggacacta tgcgcgcaaa gaagtccgca acggcgtgca
     1621 ttacctgctc aaaggtttgg atcgaaacaa agaccaaagc tatttcctct accgcctcaa
     1681 gcctttccaa ctcgagcgcg cgatttttcc gttgggcggt ttggaaaaac ccgaagtccg
     1741 ccgccttgcc gccgagttca aactgccgac tgccgccaaa aaagacagca cgggcatctg
     1801 cttcatcggc gaacgcccgt ttcgcgagtt tctgcaaaaa tacctgccga ccgacaacgg
     1861 taaaatggtt acgcccgaag ggaaaaccgt cggcgaacac gtcgggctga tgttctacac
     1921 gctcggacag cgcaaaggtt tgggcattgg cggcgcgggc gaaccgtggt ttgttgcggc
     1981 taaagatttg acgaaaaacg aactgattgt cgtgcaagga cacgaccatc cgctgctcta
     2041 tacccgcagc cttgtgatga acgatttgag tttcacgctt cccgaacgcc cgaaggcagg
     2101 acgctatacc tgcaaaacgc gttaccgtat ggcggacgcg ccttgtgagt tgcgctattt
     2161 ggatgaagaa accgccgagc tggtgtttga cgaaccgcaa tgggcggtta cgccgggcca
     2221 gtctgccgtg ctgtatgagg gcgatgtctg cttgggcggc ggcattatcc aatcaaccga
     2281 caaacccgtc atcatcacgc gataaaggta atgccgtctg aaacggtttt cagacggcat
     2341 tgttccgctc aattccactt taaagaccga tacctatgaa aaaaatctgg ttagacagct
     2401 acgagaaggg cgtcagtgcc gaaatcgaca tcacgcaata caattccgtc agcgacgtat
     2461 tccgccaaag cgtggaaaaa tttgccgacc aacctgcttt tcaaaacatg ggtaagacgc
     2521 tgacttatgc cgaaaccggc aaactggcaa cagattttgc ttcttatctg caaaacgtcc
     2581 ttaaattgcc tcgaggagag cgcgtggcaa taatgttgcc caatgtactg caatatccgg
     2641 ttgccctttt cggcattttg caggcaggtt tggtagcggt gaacaccaat ccgctctata
     2701 ccccgcgcga gctggagcat cagttgaaag acagcggcgc gaccgccatc atcgttttgg
     2761 aaaatttcgc caacacgctg gagctggtgc tgccgcgcac gcagatcaaa cacgtcatcg
     2821 tcgcctctgt cggcgaaatg ttcgggctgc ttaaaggttc gctgatcaat ttcatcatcc
     2881 ggaaaatcaa gaaaatggtg cccgaatacc gtattcggga aaccatttcc tttcagacgg
     2941 cattgaaaga aggggcgaag cacgttttcc aacctgtcgc attaaaccgc gaagataccg
     3001 cgctgttgca atacacgggc ggcacgacag gtgttgccaa aggggcggtg ctgagtcacg
     3061 gcaacatctg cgccaatatg cttcaggcaa aagaatggat taaaaaccag ttgcgcgagg
     3121 gcaaagaaac cgttatcgcc gccctgccgc tgtatcatat ttttgcctta accgtgaatc
     3181 tgatgatttt tgccaatgcc ggctcgaaaa tcatcctgat taccaacccg cgcgatatga
     3241 aaggctttat cggagaactg aaaaaacagc gggttaatgt atttatcggc gtgaacacgc
     3301 tgtttaacgc gatggttaac cgtcctgatt ttgccgaagt cgatttttca ggattgcggc
     3361 tgactttggg cggcggtatg gcgacccaaa aagccgttgc cgaaaaatgg aaaaaaatca
     3421 ccggcacgcc catcgtcgaa gcctacggtc tgaccgaagc cagccccggc gtgtgctgca
     3481 accccttaaa catcgaatca tacagcggca gcatcggttt gcccgtctcg tccaccgaag
     3541 tcgaactgcg cgacgcaaac ggcaaagaag tccccgtcgg gcagccgggc gaattgtggg
     3601 taaaaggccc tcaagtgatg caaggctact ggaaccgccc cgaagaaacc gccaaagcca
     3661 tagacgcgcg cggcttcttg gaaaccggcg atattgccgt catggacgaa aaaggctggt
     3721 tgaagctggt cgatcgtaag aaagacctcg tcgttgtttc cggattcaat gtttatccga
     3781 acgaaatcga ggaagtcatc gcgcatcacg gcaaagtcat ggaagtcgcc tgtatcggcg
     3841 ttcccgacga aaaaaccggc gaggcactca aagtattcgt cgtcaaaaaa gacccgtcat
     3901 tgaccaaaga agaacttatc gccttttgcc gcaccgaatt aaccgcatat aaagtaccga
     3961 aaaatatcga attccgcgac gagttgccca agtccaacgt cggcaaaatc ctgcgccgcg
     4021 agttgcggca aagtaccggg aaataaagaa aagatgccgt ctgaaaacag ccgtccaccg
     4081 ttcagacggc atccgtccgt ttgccagaac cgcgcgcttc acgttaaaat cacgcattcc
     4141 aacatgggta ttccatcatg accaaattca ttttcgtaac cggcggcgtt gtctcctcac
     4201 tgggtaaagg tatcgccgcc gcttctattg ccgccatcct cgaatcgcgc ggcttgaacg
     4261 ttaccatgct caagctcgat ccttatatca acgtcgatcc cggcacgatg agcccgtttc
     4321 aacacggcga agtgttcgta accgacgacg gcgcggaaac cgacctcgac ttgggacact
     4381 acgaacgttt catcgattcc acgatgaccc gccgcaacag cttcagcacg gggcaggtgt
     4441 acgaaaacgt catcgccaaa gaacgacggg gcgactacct cggcggtacg gttcaagtca
     4501 tcccgcacat taccgacgaa atcaaacgcc gcatccacga aggcgcggca ggttacgatg
     4561 tggcgattgt cgaaatcggc ggtacagtcg gcgatatcga atctttgcca ttcttggaag
     4621 ccatccgcca aatgcgcagc cagctcggcc gcaacaatac attgtttgcc cacctgagct
     4681 atgttcctta catcgccgct gcaggcgaaa tcaaaaccaa gccgacccag cacaccgtta
     4741 aagaaatgtt gagcatcggt ttgcaacccg acatcctgat ttgccgtatg gacaggacaa
     4801 tgcctgcgga cgaacgccgc aaaatcgcct tgttctgcaa cgtggaagaa cgcgcgattg
     4861 tcggcagcta cgatgtggac agcatctacg aatgccccga aatgctgcac gaccaaggca
     4921 tcgataacat cattaccgag cagttgcagc ttaatgtgca gcaggcggat ttgaccgcgt
     4981 ggaaaaaaat cgtccacgcc atccaaaacc cgaaacacac cgtcaaaatc gccatggtcg
     5041 gcaaatacgt cgatttgacc gagtcctaca aatcgctgat cgaagccttg aaacacgcag
     5101 gcattcacac cgaaaccgac gtacaaatta cctttgttga cagcgaaagc atcgagaaaa
     5161 acaacggcga cgtttctatg ctcaaagata tggacgccat cctcgttccc ggcggtttcg
     5221 gttcgcgcgg cgtggaaggc aaaatcgccg ctgtgcgcta tgcccgcgaa aacaacgtgc
     5281 catacttggg catctgcctc ggtatgcaga ttgcgctgat cgaatacgcc cgcgacgtgg
     5341 caggtttgaa aggtgcgaat tccaccgagt tcgacctcaa atgcgccgcc cccgtcgttg
     5401 ccctgattga cgaatggcaa actgccgacg gcagcgtcga aacccgcgac gaatccgccg
     5461 atttgggcgg caccatgcgt ttgggcgcgc aagaagtcga attgaaagca ggcagcctcg
     5521 ccgccaaaat ctacggcagc gaacacatcc gcgaacgcca ccgccaccgc tacgaagtca
     5581 acaacaacta cgttcctacg ctggaacagg caggtttggt catcggcggc gtatccgccg
     5641 gacgcgaacg cttggtcgaa accatcgaac tgccgaacca tccttggttc ttcgcctgcc
     5701 agttccaccc cgagtttacc tccaatccgc gcaaagggca tcctttgttc accgcgtttg
     5761 tcaaagctgc gttgaacaat aaaaaagcct gataaagcgt tacttgatga tcaaaatgcc
     5821 gtctgaaagc ctgaatgaag actttcagac ggcatttttg caaatcgggg atcataaaag
     5881 ccatcaattt aatttttatg gttttatcta atattgacca actgaatatt gttaagcggg
     5941 gcgtgaaact caagttgaga cctttgcaaa attccccaaa atcccctaaa ttcccaccaa
     6001 gacatttagg agatttctca tgagcacctt ctttcagcaa accgcacaag ccatgattgc
     6061 caaacacatc gaccgcttcc cgctattgaa gttggaccag gtgattgatt ggcagccgat
     6121 cgaacaatac ctgaaccgtc aaagaacccg ttacctcaga gaccaccgcg gccgtcctgc
     6181 ctacccgctg ttgtccatgt tcaaagccgt cctgctcgga caatggcaca gcctctccgt
     6241 tcccgaactc gaacacagcc tcatcacccg catcgacttc aacctgtttt gccgtttcga
     6301 cgaactgagc atccctgatt acagtatagt ggattaacaa aaaccagtac ggcgttgcct
     6361 cgccttagct caaagagaac gattctctaa ggtgttgaag caccaagtga atcggttccg
     6421 tactatttgt actgtctgcg gcttcgtcgc cttatcctga tttttgttaa tccactataa
     6481 agaccgtcgg gcatctgcag ccgtcattcc cgcgccggcg
//
LOCUS       DBBZXW010000106         6485 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.106, whole genome shotgun sequence.
ACCESSION   DBBZXW010000106 DBBZXW010000000
VERSION     DBBZXW010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.106"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..96)
                     /locus_tag="ACJJD2_001803"
     CDS             complement(<1..96)
                     /locus_tag="ACJJD2_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7580286.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTAAELVG"
     gene            163..465
                     /locus_tag="ACJJD2_001804"
     CDS             163..465
                     /locus_tag="ACJJD2_001804"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580287.1"
                     /translation="MKDFDEVCEKWEKSFKENGKEIEYNQKYSRIYGEVRGAGFNGDI
                     GEKLHRCAVMEWAENETVKLAQKWEQEQKKQQIQQKKETEKSPKHKASRDDWEMER"
     gene            complement(547..2634)
                     /locus_tag="ACJJD2_001805"
     CDS             complement(547..2634)
                     /locus_tag="ACJJD2_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HGG7580288.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLA
                     ILQQLISLLQAWVGMHLSTTLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAVFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
     gene            complement(2637..3902)
                     /locus_tag="ACJJD2_001806"
     CDS             complement(2637..3902)
                     /locus_tag="ACJJD2_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HGG7580289.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKLEQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            complement(3946..4083)
                     /locus_tag="ACJJD2_001807"
     CDS             complement(3946..4083)
                     /locus_tag="ACJJD2_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580290.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGIS
                     I"
     gene            complement(5123..5359)
                     /locus_tag="ACJJD2_001808"
     CDS             complement(5123..5359)
                     /locus_tag="ACJJD2_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HGG7580291.1"
                     /translation="MKELHTSELVEVSGGKFHIFAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGISKKW"
BASE COUNT         2067 a         1141 c         1121 g         2156 t
ORIGIN      
        1 gcctactaac tctgctgctg ttcttgcagt tacacctgcg acaaatagct caatgagttt
       61 attttgttta taccggctta gacgactttt tctcataggg ataattctaa cttaatttga
      121 atttccctag ttatctagga cagcccctta aaaaatatcc ctttgaaaga ttttgatgaa
      181 gtttgtgaaa agtgggagaa atcctttaaa gaaaatggaa aagaaattga atataatcaa
      241 aaatattcaa gaatttatgg tgaagttcgt ggagctggct ttaatggcga tatcggagaa
      301 aagctacatc gttgtgccgt gatggaatgg gctgaaaatg agaccgtgaa attagcccaa
      361 aaatgggaac aagagcagaa aaaacaacaa attcaacaga aaaaggaaac tgaaaaatcg
      421 ccaaaacaca aagccagtcg tgatgattgg gaaatggaac gttaaaccgc tattttcatg
      481 tattctatta aattatttga aaaaagactt cactttttgt taaagaaaaa tgaagtcttg
      541 ttctgttcaa cctaaattca gaattttatc tgccgattga attgtttctt ggcggtgtgc
      601 aaccattatt ttcataatac caagactttt taggttatgg ttaatttttt gttcattttc
      661 tacatctaaa tggctacttg cttcgtctaa aaatagaatt ttgggtcgtt tatacaatgc
      721 acgagccaag ataactctct gcttttgtcc acctgataag atatttccca tatcgccaat
      781 caaggtctca tagcccattg gcattttaag tatatcgtca tgtatttgtg ccatttttgc
      841 acattgttca atgagctcca tatttgggct ttcatcaaaa aatgaaatat tttccccaat
      901 agaacctgca aaaaggacat catcttggcg aacaatcccg ctcaatcccc taataaagga
      961 tggagaaact tgatatatat catgcccatt aatactaact gtaccagttt caggttttag
     1021 gctacctgtt aaaatgttta acaaagtgga cttcccccga ccagattgtc ctgttaaaac
     1081 aactgcttca ttatctttaa attccaaatt aatgttttca aaaagatatg gctcattatc
     1141 agcatatctg aatgagacgt tttcaacttt aagaaccagt tgttcattat ctaatttagg
     1201 tatatgatta tacttaataa tttcagtttc tgtttcattt aaagtaatgt cagccaaacg
     1261 ttcagcatga agccctaaca ttttgatttg gatgtattgg tcaacgagag aagctgttct
     1321 gctttcaaat tgccctttat aagccaaaaa agccatcaga acaccgactg taaatgaacc
     1381 atctaaaatt gcgcttgcac caagataaat tatgataata ttttccatgc taaacaacag
     1441 tttatttgaa aattcaaata aagcagagag tttatctgtt gtcagcttgg tattgactgt
     1501 attcacaaat aggctcatcc aagtgccatg tctttgataa tgtttatcaa ataatttaac
     1561 tgattggata ccacgaatgg tttccatgaa atatgagttt tgtttggctt catgaacaat
     1621 attttcttct gttgcatttc ttaatgggta atatgcaagc caacgaatta gtatgtacaa
     1681 aacaagtgtt aaaagaacaa tcagcgataa ttgagtgctg taaattgtca ttaacacgaa
     1741 agtaaaaaca gccattaagc tatttaaaac taaaacaaaa aaagtagaag ttagtgtttc
     1801 ttggatatga tctattgaac caaatcttga aatcacatct cctaaatgtc gtttactgaa
     1861 atagtcatta ggtaagtcaa gtaacctttt aaatatattg gctttccatt gtaaattaag
     1921 agttgtagat aggtgcatac ctacccatgc ttgtaacagg ctaattaact gttgcaggat
     1981 agccagtaaa ccaaatccca aagtaagggt cagtaataaa tttttatcag cagttacaat
     2041 gacatggtct attacccatt gcataaagaa tggactaacc aatgcaaaga cttccaaaga
     2101 aatagctaat ataagcattt gaattaaaga gcgttttaag cctgaaatcc cccttaatag
     2161 agataatatt ttgattttct ttgtttcttt tttctcttca aaatgggtat tggggaataa
     2221 ttctagggca atccctgtga atttttgtga aacttcgtcc attttgattt ttcgcatacc
     2281 gacagcaggg tccataatga cgatactgtc tttggaaatg gaacaaagta caacaaaatg
     2341 gtttaagttc caatggagaa tgcagggtag ttgtaaattt gacagctcat ctaactctaa
     2401 acgcaaagct cgtggcgtta aattcatttc attgccaaat ctcatgatgt ctgcaagatt
     2461 tgcgcccttt aatgacaggg tgtatttttg gcgtaacgtt cttaaatcag tgtgaaagcc
     2521 ataataggac aagatggatg tcaggcatgc taaaccacat tcagcaactt ctgtttgcag
     2581 aatgacaggt agctttttgt taaatccaaa ggacagtctt gataaataat ccatttttaa
     2641 ttgatttttc ctgaaatgct gtaaagtggg tcaagtaccc attcgtacaa tttttttcgt
     2701 tcatggagaa tatctgcttc taaaatcatg ccaatttgaa gcggcttgtt ttctccgtat
     2761 gctttaatcg tttgtttttc caatttaact ttcacaagat aggcaggttc atttaataag
     2821 gttgggttag tgaaaatgat acctaaacct gatagctctt gtttaccgag agcagttctg
     2881 gcaactgaaa taatttctcc tgtggcatgt ccaaattttt ggtaagggta cgcttggtaa
     2941 cgtaaaacaa ctttatcttt cggtttaata aaaccaacag ctttactggg tatgtaaaga
     3001 ttggcgacca attcagtttg ttcagggaca atgcttaaca gcaatttaga cggttcaact
     3061 tgttgcccta tatcaacatt aattgttgat atataacctg atttactagc tcgtatggtt
     3121 tgttcggatt tcaaatcaaa atccaaaatt tcttggttca tttccgtaat cgcacggttg
     3181 agttggctca attcggtttt atggcgttca ggcaggctgc ttaatgtaat tttctgttca
     3241 tcaagttccc tgattgcatt attttgttca agttttaggc tctccaaacg tgagcgttgt
     3301 tccaataaat ggctttcggc ggtcatctta tcttgttggg atactgcgcc ttgactggct
     3361 aaaaacttgt tcttgttaag ggttttttcc gctaaacgaa tttgacgatt ttgccctgta
     3421 atttgctgtt taatattctc taattgattg tttaaacgat gaatgttgtt atgaacattt
     3481 ttttgctcat tttgatgaat gcgctttaaa cgttccaatt cttgtaatgc caaagttttt
     3541 ttaaggttgg cttctgctgc caatttggct tgtacgtttc ctttttcgcc aaaacgcgat
     3601 gtggaaagtt tgaacaatgg ttcgccagct ttgacaaagt taccatcttc aacaaattta
     3661 tgcgtaatcg tgccgatatc ggaagagtaa acacgaacca cccccatagt tggaagtaat
     3721 tgaccttcaa cggttgtttt attggtatag ctaccaaaaa tcaaaaagat aatgatacac
     3781 agagcaatga gaaaagcgca aaaagtcaga aataaaaaag agaatggacg ggtcaagata
     3841 acctgacctg tccacttatt ttgttgggct acaaagactt cttttcggaa taagtgggac
     3901 atttattatt atttcttaaa aaaatggata gaaaaacacc aataattaaa tacttatgcc
     3961 taataacata aatttgctat tgattgatgt ttctatttta attacattaa atttaaccaa
     4021 taatccagaa atggttgcag ctaaaatgca aaagacagtg gcgtaaatgg tttcagtatt
     4081 cataattttt ctctttcaaa attgttcaat ctaaatagaa aaaggtaact tcaatacata
     4141 ttgctgtaac tgaaattacc ttttccttaa tgatgtaatt atcttatggc ttcatcatgc
     4201 cacgaccgat attgtatccg ccagcagcag agaaaatacc agctccaatt gcgccaaccc
     4261 agcctactgg tcctgtccac ttgttccgtt gagctacaaa gacttctggt ctgaaaaatg
     4321 agtgattgtt agacatgtgt acttatttat gtttctttga ttgggataaa tttgtaaaaa
     4381 caaaaaaaag gcaagttgtt attatagaag aacttaaaat gcttaacata ctcattgagg
     4441 tttgtaccac ataatgagat acgagataat ttgttgggag taaaatcaaa aaaagattaa
     4501 atatttaaaa taatcactat attttttcat tatttgttcc tttttgtatt taagttctta
     4561 tgaaaaacta gggtattttg aatagaaaat atcaaaatac cctagtttta ttaaggaata
     4621 ttaccaccaa caagtgcttc catattgtac agcaccagtg attgcaccac caatagctcc
     4681 gaatttcgca cttggaatag caccaatacc acctgcaaat gaaccaacaa ttgccccacc
     4741 agctgctcca cctaatgcac taccaatggt attttttgag aaatcacgcc agttacaagc
     4801 agcaccagaa acttgttaaa tttcattcaa agtcaaaact tgcataatat tcacctttgt
     4861 taagtgtggt tgagaaaaaa gtaaattttc atcgttactc attatttgca atcatgcata
     4921 tactgtaacc aagcactata ttcagttgga tcatagtttt tcctactggg ttgtctgata
     4981 tgactattgg cactattggc acaattggga ttagcaactt tattgtgagt acctaatgga
     5041 ttgatatttc ctgtaaagtg gctattgcat gcgcttaatg agcatagatt tattaatgtc
     5101 agaaaggata aaacaaaaaa tcttaccatt ttttactaat accaaaagta ggtttcgaaa
     5161 actgtacacc aagaccttgt acatatccaa attgcttgct aacagaaaac tctactccac
     5221 tattgttagg ggaataggaa gcaccaattt taccaacagc aaccatatct tttttaccta
     5281 ggttgccgcc accctgtgca aagatatgga atttgccacc tgacacttca actaattcag
     5341 aggtgtgtaa ctctttcatg attttctcct gtaaagaagt atggttggaa atgtaaatca
     5401 gaattaacct ttcttaagtt taatttaata ctttttttgc aagtatttta ttttaaatta
     5461 aatcaatatt ttaaaaatat ttacttgtat actgaatatt tacttgtata ctgaaaaaga
     5521 aactcctaat ggtggagtgg ggcttttgtt taagtaagca ttgaaaaaat ttaaatttcc
     5581 cattatgatt aacttaatgc aagagctttt tcaggacgta caaaccagcg aacgggcgtt
     5641 ctgatgtggg caggttggtt gtcgctaacc aatttcagta gctcaatcgt cagattggta
     5701 tccggcccta tcaagctaag gagaggctgc ggctactaca caaagcacct gaaattattg
     5761 ggtgcttttg tctttttatg gcattgtacc aatttgtgta ccacgagggc ttgttcgacc
     5821 aaacgcggta acaactgaat acacactttc cccctcaact tctttgcgtt ctaaaacgac
     5881 tgtcccaatc cgagaataga caatcatagg acgatgattg ccccttacat cactaaattc
     5941 actaaaaatt tttgcgcctg attgaaaaat catttccaca taaaagggtt acacctgttt
     6001 catcgtggct taatccaaac cgcgttaaat ctgctttgtg ttctgccaaa atgtgaatca
     6061 caccaaagcc gtgattaacc tttttgtgtt cgccgtgttt taaaacaatt tgacctgccg
     6121 ggaagtctgc tctattgttc ggacaatagg gggaatatac caattacttt aactacatca
     6181 ttttttgaca tttttcttgc ctttcaattt aaaatccaaa atcatactgc cataatttag
     6241 caatccaaaa aaatttaggc agcagtcatg gtttcgtatt ttagaaaacg aaacttggtt
     6301 tggtgttttg aagcatttca gtacacaaac atggaatttt aaattgtctt gtgttgcctt
     6361 gatttaggat gttccagttt tttaataaat agtttggggc tgtcctagat aactaggaca
     6421 aacttgattt tactaattgt tttaaaatgg aacaagaact tttatctcac tgttgttaaa
     6481 acgtc
//
LOCUS       DBBZXW010000107         6332 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.107, whole genome shotgun sequence.
ACCESSION   DBBZXW010000107 DBBZXW010000000
VERSION     DBBZXW010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.107"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..218
                     /locus_tag="ACJJD2_001809"
     CDS             <1..218
                     /locus_tag="ACJJD2_001809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580292.1"
                     /translation="YCLRLRRLVLIFVNPLYRHSRKNKKIKNTKLKYRHSRAGGNLGL
                     SVRKLIGKNGFSNPETPDSCFRGNPVF"
     gene            complement(536..781)
                     /locus_tag="ACJJD2_001810"
     CDS             complement(536..781)
                     /locus_tag="ACJJD2_001810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580293.1"
                     /translation="MPSELQTAFPASQLQRERTHTAIPAKNRKSKKKPKIRHSRAGGN
                     PIRPVSVFFEFQVTSKPPFPQKRESRNSKLQEFIKND"
     gene            complement(794..1378)
                     /gene="rnhB"
                     /locus_tag="ACJJD2_001811"
     CDS             complement(794..1378)
                     /gene="rnhB"
                     /locus_tag="ACJJD2_001811"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HGG7580294.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRHDFAPVRNLLAQQTLF"
     gene            complement(1446..3341)
                     /gene="mnmG"
                     /locus_tag="ACJJD2_001812"
     CDS             complement(1446..3341)
                     /gene="mnmG"
                     /locus_tag="ACJJD2_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HGG7580295.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(3666..5093)
                     /locus_tag="ACJJD2_001813"
     CDS             complement(3666..5093)
                     /locus_tag="ACJJD2_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7580296.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            5253..6242
                     /gene="pdxA"
                     /locus_tag="ACJJD2_001814"
     CDS             5253..6242
                     /gene="pdxA"
                     /locus_tag="ACJJD2_001814"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HGG7580297.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAVEAVEAGKLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
BASE COUNT         1331 a         1668 c         1815 g         1518 t
ORIGIN      
        1 tgtactgtct gcggcttcgt cgccttgtct tgatttttgt taatccacta tatcgtcatt
       61 cccgcaaaaa caaaaaaatc aaaaacacaa aactgaaata tcgtcattcc cgtgcaggcg
      121 ggaatctagg tctgtcggta cggaaactta tcgggaaaaa cggtttttcc aaccctgaga
      181 ctccggattc ctgttttcgc gggaatccgg ttttttgagt ttcagtcatt tttgataaat
      241 tcttgcagct ttgagtttct agattcccgc ttttgcggga atgacgcgga aaagttgctg
      301 tgatttcgga taaattttcg tcacgcttaa tttctgtttt atccgataaa tgcctgcaat
      361 ctaaaatttc gtcattcccg caaaaacaaa aaatcaaaac agaagcctaa aatttcgtca
      421 ttcccgcgaa ggcgggaatc taggtctgtc ggtacggaaa cttatcgggt aaaacggttt
      481 tgccagccct gagactccgg attcctgttt tcgtaggaat ccggtttttt gagcttcagt
      541 catttttgat aaattcttgc agctttgagt ttctagattc ccgcttttgc gggaatggcg
      601 gtttggaagt tacctgaaat tcaaaaaaaa cggaaaccgg acggattgga ttcccgcctg
      661 cgcgggaatg acggatttta ggtttctttt ttgattttct gtttttcgcg ggaatggcgg
      721 tatgggttct ttctctttga agttgcgatg ctggaaatgc cgtctgaagt tcagacggca
      781 tttttgtgcc ggtttaaaac agcgtctgct gcgcgagcag gtttctgacg ggggcgaagt
      841 cgtggcgatg ttcgggcagc acgccgtatt gtttgagggc ttccagatgc tgcttcgtgc
      901 cgtaaccttt gtgtttgtcg aaaccgtatt ggggatggcg ttgcgccagt gcgtacattt
      961 ccgcatcgcg tgcggtcttt gccaaaacgg atgcggcgga gatttcgatg attttgctgt
     1021 cgcctttgac gacggcttcg gcagggatgt tcaaatgttc gggaatgcgg ttgccgtcga
     1081 tgaatattct ttcgggacgc acagccaaac cgtcaacggc gcgtttcatc gcgagcatgg
     1141 tggcgtgcag gatgttgagg ctggcgattt cttcgggcga ggcggcggca acgtgccacg
     1201 caaccgcctg attttttatc atttcggcaa gcgcgtcgcg ttttttctcg ctgagttttt
     1261 tggagtcggt cagtccgggc aggtcgaata tttccggaag gatgacggcg gcggcaaaca
     1321 cgctgccgac taaaggcccg cgccctgcct cgtccacgcc ggcggtcagt atgtgcatga
     1381 tgtttcctgt cgggatggcg cgatgccgtc tgaacggtgt ttcagacggc atcgcgccga
     1441 tgtgtttatt tcgcgtcttt aaacccgcgc ttcaaatgca ccatcagcaa tgccactgcc
     1501 gcaggggtta cgccggaaat gcggcttgcc tgcccgacgg tttcgggttt gtgctggttg
     1561 agcttttgct gcacttctgc cgacaaacct ttaactttgc tgtaatcgat atcctcgggc
     1621 agctttaagg tttcgatgtc gcggcggctg tcgatttctt cgttttggcg gtcgatatag
     1681 ccttggtatt tgacttggat ttcgacttgt tcgaccactt cggcggagag gcgttcagac
     1741 ggcatcgcgc cttcgagcgt catcagcgcg gcgtagtcga ggttcgggcg gcgcaggagg
     1801 tcgtgcaggt tggcttcgcg gctgagcttt tgcccgaata cgcggatttg ttcgtcttcg
     1861 gcgagttttt gcggcgtgta ccacgttgtt ttcaaacgtt ggatttcgcg ttcgatggct
     1921 tcgcgttttt cgttgaacat gcgccattgc gcttcaccca ccaagccgat tttgtagccg
     1981 tcttcggtca ggcgcatatc ggcgttgtct tccctgagtt gcaggcggta ttcggcacgg
     2041 ctggtgaaca ttcggtaggg ttcgttcacg cctttggtga tgaggtcgtc caccaatacg
     2101 ccgagatagg cttgttcgcg gcgcagcagg agcgggtctt gttcgcggac gtattgcacg
     2161 gcgttcgcgc ctgccagcag tccttgcgcg gcggcttctt cataacctgt cgtaccgttg
     2221 atttgcccgg cgaaaaacaa tccggcaatg gttttggttt cgaggcttgc tttgaggttg
     2281 cgcggatcga agtagtcgta ttcgatggcg tagccggggc gcaggatatg ggcgttttcc
     2341 aaacctttca tactgcggac gagcgcgatt tggatgtcga acggcaggct ggtggagata
     2401 ccgttggggt agtattcgtg cgtagtcagg ccttcgggtt ctaggaaaat ctggtggctg
     2461 tctttgtcgg cgaagcggtt gattttgtct tcgatagacg gacaataacg cgggcccacg
     2521 ccttcgattt tgccggtaaa catcgggctg cggtcgaagc ctgagcggat gatgtcgtgg
     2581 gtttgcgtgt tggtatgcgt aatccagcag gacacttggc gcgggtgcat ttcggcgttg
     2641 ccgcgtacgg acatgacggg aacgggcgtg tcgccgggct gttcggtcag ttgggagaag
     2701 tcaatcgtgc gtccgtcgat gcgcggcggc gtgccggttt tcagacggcc ttgcggcagg
     2761 ttcaattcgc gcaaacgtcc gcccagcgat ttggcggcgg ggtcgccggc gcgtccgccc
     2821 tcgtagtttt ccaaaccgat gtggattttg ccggacaaaa acgtgcctgc ggtcaacacc
     2881 acggcgcgtg ctttaaactc cacgcccatc gcggtgatta cgcctgaaat gcggtcgcca
     2941 tcgagcgtta cgtcttcgac ggcttgttgg aaaaggtcga ggttttcttg gttttccaac
     3001 atttcgcgga tggcggcttt atataggata cgatccgcct gcgcgcgcgt ggcccgtact
     3061 gccgcgcctt tgctggcgtt cagacggcgg aactggatgc cggatttgtc ggttgccaac
     3121 gccatcgcgc cgccgagcgc gtcgagttcg cgcaccaaat gccctttgcc gatgccgccg
     3181 atggaagggt tgcacgacat ttgtccgagc gtttcaatat tgtgtgtgag caaaagcgtc
     3241 tgcgcgccca tacgggcggc ggcgagcgcg gcttctgtgc cggcgtgtcc gccgccgacg
     3301 acgataacgt cgtaggtttt ggggtaaatc atgtgggtca tgtgtgtatt gcctgacggt
     3361 gtttcagacg gcatttatag tggattaaca aaaaccagta cagcgttgcc tcgccttagc
     3421 tcaaagagaa cgattctcta aggtgctgaa gtaccaagtg aatcggttct gtactatctg
     3481 tactgtctgc ggcttcgccg ccttgtcccg atttttgtta aaccactata ttcaatatgc
     3541 cgtctgaaaa acgaaatgga ttcaaaagta aagggttggg attgtacgct tgttcgccct
     3601 gtttttacag tgtgcggaaa gggaaaagcc gcttcgcggg gaagcggctc cggtaagggc
     3661 gggatttacc aaacgtcgga tttgatacgg cgtttcaggc ccggatgttc ggaaagtttg
     3721 aactcggggt ctttgcccat tttcagcttg gcggtgtaat cgcgcagcag cataaacgcc
     3781 agtggcgaga gcagcaggat ggcgacaagg ttgatccacg ccataatgcc catcgccata
     3841 tccgccatat cccagaccaa aggcacattg gcaaccgcgc cgaaatagac ccacgccaaa
     3901 accagcatac ggaaaacggc ggtaatcagc caatggcttt tgatgaattg gacgttggac
     3961 tcggcatagg catagttgcc gataacggtg gaaaaggcaa acataaacag gatgacggcg
     4021 aggaagcccg cgccccattg ccccacttgg ctgacaatcg ccgcctgcgt cagcgccgca
     4081 ccgctcaaat cgccgtaagg ctgttggtaa atcaagatga tgaaggcggt gcaagaacaa
     4141 acgatgatgg tatcgacaaa cacgcccagc atttgaatca taccttgcga aacagggtgt
     4201 ttcacttcgg cggcggcggc ggcgttcggc gcggaaccca tacccgcctc gttggaatac
     4261 aggccgcgtt tgatgcccat catcatcgtt tgcgaaatca gaccgccgag taagccgcct
     4321 gctgccgcgt cgaatttgaa cgcgcccgaa aaaatctgac cgaacacgtc cggaatcatc
     4381 ggaatattgg tcaaaatgat gaaaagcgcg ataaagaggt acaaaaccgc catcaggggg
     4441 acgacgattt ccgccgcttt agatatgcgc ctgatgccgc cgaagataat cggcgcggtt
     4501 aaaatcacca gggcgacgcc gacataatga ggctcccaac cccacgccgc tttgacggta
     4561 tcggcaatgg tattggtctg aaccgcttca aacacaaagc cgaaacagaa aatcaggctc
     4621 agggcgaaca acacgcccag ccatttctgc cccagccctt gagtgatgta gtaggcaggg
     4681 ccgccccgga aatggtggtt gtcgtagtcg cggactttaa agagctgcgc cagcgaagat
     4741 tcgacaaacg ccgaactcat accgattaag gcggttaccc acatccaaaa caccgcgccc
     4801 ggtccgccga ctttgatggc gatggccacg cccgcgatat tgcccacgcc cacgcggctg
     4861 gcaaggccgg ttacaaatgc ctgaaacggc gtgatgccgt gagggtcgtc cccctgtttg
     4921 cggccgccga gcatttcttt gatgctgcgc ccgaacaggc ggaattggac aaagcccgtg
     4981 gttacggtga agaaaagccc cgtacccaaa agcatataaa ccaagtatga ccacatcgga
     5041 tcgttgatgg cgccgaccca gccgtgcagc cattcggtaa agttctcgtt catatcgctt
     5101 ccttaaagtt gaaactcgca catattggcg gtatgcaagc agggtttaaa ttttgtaaac
     5161 gcccattcta gcagattgtc aacaaaatca gaaaaattta catcgccgcg cggctgcggc
     5221 gttagaatcg cattttgttt ggagcaaaca cgatgaaaca gcctgttttt gccgttactt
     5281 ccggcgagcc tgccggcatc ggccccgata tttgtttgga cttggcgttt gcacgcctgc
     5341 cctgccgctg cgcggtattg ggcgacaaaa acctattgcg cgcgcgcgcc gaagccttgg
     5401 gcaaaagcgt cgtcctgcgc gacttcgatc cagaatcagg cggcgcggca tacggcgagc
     5461 tggaagtgct gcacatccct gccgtcgaag cggttgaggc gggcaaactc aatcccgcca
     5521 acgccgccta tgtgctgcaa cttttggaca ccgcgctcgc aggcatttca gacggcattt
     5581 tcgacggcat cgttaccgcg ccgctgcaca aaggcatcat caacgacgcg cgcgcaagca
     5641 caggtttttt cagcggacac accgaatatc tggcggaaaa aagcggcacg gggcaggtcg
     5701 tgatgatgct tgccggcaaa ggcctgcgcg tcgccctcgt aacgacccac ctgccgctga
     5761 aagacgttgc cgccgccatc acgcaaccgc tgattgaaag cgtcgcacgc attttgcatc
     5821 acgacttaaa acacaaattc ggcatcaaaa atcccaaaat ccttgtcgcc ggacttaatc
     5881 cccacgccgg cgaaggcgga cacctcggac acgaagaaac cgacaccatt atccctgcat
     5941 tggaaaacct gcgccgcgaa gggataaacc ttgccggccc gtatccggcg gacacattgt
     6001 tccagccgtt tatgctcgaa ggtgcggatg ccgtattggc gatgtaccac gaccaagggc
     6061 tgcccgtgtt gaaataccac agtttcgggc agggcgtgaa catcacgctg ggtctgccct
     6121 ttatccgcac ctctgtcgat cacggcaccg cgctcgattt ggcggcaacc ggcagggcgg
     6181 attccggcag cctgataact gccgtggaga ccgccgtcga gatggcgcgc ggcagccttt
     6241 aaagatgata aaagacccgt catttccgcg caggcggcat cgtccaccct ccgccgtcat
     6301 tcccgcgcag gcgggaatcc agaccttcgg gc
//
LOCUS       DBBZXW010000108         6273 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.108, whole genome shotgun sequence.
ACCESSION   DBBZXW010000108 DBBZXW010000000
VERSION     DBBZXW010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6273
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.108"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(154..2082)
                     /gene="dnaK"
                     /locus_tag="ACJJD2_001815"
     CDS             complement(154..2082)
                     /gene="dnaK"
                     /locus_tag="ACJJD2_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HGG7580298.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDHIIAEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLITRSIEPCKIALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVRDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGTASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2290..2562)
                     /locus_tag="ACJJD2_001816"
     CDS             complement(2290..2562)
                     /locus_tag="ACJJD2_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580299.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2748..3434
                     /locus_tag="ACJJD2_001817"
     CDS             2748..3434
                     /locus_tag="ACJJD2_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7580300.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3566..3904
                     /gene="erpA"
                     /locus_tag="ACJJD2_001818"
     CDS             3566..3904
                     /gene="erpA"
                     /locus_tag="ACJJD2_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HGG7580301.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3921..4067
                     /locus_tag="ACJJD2_001819"
     CDS             3921..4067
                     /locus_tag="ACJJD2_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580302.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4064..4315
                     /locus_tag="ACJJD2_001820"
                     /pseudo
     CDS             4064..4315
                     /locus_tag="ACJJD2_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            4466..4681
                     /locus_tag="ACJJD2_001821"
                     /pseudo
     CDS             4466..4681
                     /locus_tag="ACJJD2_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            4716..6227
                     /gene="ubiB"
                     /locus_tag="ACJJD2_001822"
     CDS             4716..6227
                     /gene="ubiB"
                     /locus_tag="ACJJD2_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HGG7580303.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAVWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT         1414 a         1382 c         1675 g         1802 t
ORIGIN      
        1 taaaaaattt ccagagaacc gatataacag ttagaacttg ggcttgggaa tatcacggta
       61 gatgaatttg gaacctctgt tatgctatgg tcttttatct caattgaaaa aagcgcgaat
      121 caaacggttc gcgctttttt cagacggcat caattatttt ttgtcgtctt ttacttcttc
      181 aaagtcggca tctacgacat catcgtcttt ctttgcagaa gcattggctt gttcgctttc
      241 gcctgcttgg gcttcagctt gtgcttgagc gtaaaccatt tcccccagtt tttggctggc
      301 tgtgcccagt gcttcggttt tggcatcgat agcggctttg tcgtcgcctt taactgcttc
      361 ttcggcttct ttcagcgcgg cttcgatttt ttctttctcg gctgcgtcga gtttgtcgcc
      421 gtagtcggcc aaagattttt tcacagagtg aatcagggct tcggcttggt tgcgggaagc
      481 gaccaattca gtcagttttt tatcttcctc ggcattggct tcggcatctt tcaccatgcg
      541 ttcgatttct tcttcgctca aacctgaaga accttggatg gtgatgttgg ctgctttacc
      601 ggtgcctttg tctttggcgg aaacgtgcag gatgccgttg gcgtcgatgt cgaaggttac
      661 ttcgatttgc ggcataccgc gcggtgcagg tgcgatgtcg cccaagttga actgacccaa
      721 agatttgttg gcagaagcgc gttcgcgttc gccttgcagt acgtggatgg ttactgcgct
      781 ttggttgtct tcggcggtag agaacacttg cgacgctttg gtcgggatgg tggtgttctt
      841 ctgaatcagt ttggtcatca cgccgcccat ggtttcgata cccaaagaca gaggagttac
      901 gtccagtagc aatacgtcgc tgcggccgcc gctcaatact tcgccttgga tcgctgcgcc
      961 tacggcaacg gcttcgtcag ggttcacgtc tttgcgcggt tctttgccga agaagtctct
     1021 cacggcttct tgtactttcg gcatacggga ctgcccgccg accaagatta cgtcgtcgat
     1081 gtcgccggtg ctcaagccgg catctttcaa tgcaattttg caaggttcga tagagcgggt
     1141 aatcaggtct tcaaccaggc tttcgaattt ggcgcgggta attttcatcg ccaagtgttt
     1201 cgggccggtt gcgtccatgg tgatgtacgg caggttaatt tcggtttgct ggccgctgga
     1261 caattcgatt ttggcttttt cggcagcttc tttcaggcgt tgtagagcca tcacgtcttg
     1321 tttcaaatca atgccttgtt cttttttgaa ctcggcgatg atgtggtcga tgaggcgttg
     1381 gtcgaagtct tcaccgccca agaaggtatc gccgttggtt gccaatactt cgaattgttt
     1441 gtcgccgtcg aggttggcga tttcgatgat ggaaatatcg aaagtaccgc cgcccaagtc
     1501 atatacggct actttgcggt ctttgttgtc gcctttgtcc ataccgaatg ccaaagcggc
     1561 tgcggtcggc tcgttgatga tgcgtttcac gtccaaaccg gcgatacggc ctgcgtcttt
     1621 ggtggcttga cgttggctgt cgttgaagta ggcagggacg gtaatcacgg cttcggttac
     1681 tttttcgccc aagtaagctt cggcggcttc tttcatttta cgcaggactt ctgcggaaat
     1741 ttgaggagga gacagctctt tgccttgtgc ttttacccat gcgtcgccgt tgttggcttt
     1801 gatgatttcg aaaggcatag attcgatgtc gcgttggact tctttgtctt caaatttgtg
     1861 gccgatcagg cgtttggcgg cgtaaatggt gtttttagcg ttggttacgg cttggcgttt
     1921 ggcaggcgca ccgacgagga tttcgccgcc gtccaaataa gcgataacgg acggcgtggt
     1981 gcgtgcgcct tctgcgtttt cgatcacttt ggtttgaccg ttttcggaaa tggccaaaca
     2041 agagttggtt gtacctaagt cgataccgat tacttttgcc atgtggataa tcctatttga
     2101 ttttgcttat tttgagaaat atgttggaac attttgtccc gatgggctgt aaatagggcg
     2161 ggcggcgggc tgtttcaagc tacagcatgg ctataagtat ataactttat gaatatattg
     2221 gttttatatt tgatttaata catttggctc caatgcattt aagcataata tttcaaatgg
     2281 caggcaggtt tattcataga cgatgccggc gagcatttcc tgttcgttca agttgccgta
     2341 ctctttttcc cagtcgtgtg aagactcgat gatgtcgcat tctttggaaa gggagacttg
     2401 ttctgcatcc atatctttgg cgttcagtat gttgaattgt tcgcacaggg atgcggataa
     2461 agtgatgtca ggctgtttgg cttcagaacg gttttcttgg aaggcaaagc agaatgcggt
     2521 aaatgccgca gcatagataa gatatttgcc ggttttcttc attttctatc ctttttctgt
     2581 caactcagga ttaaacctat ggaaaatctt aaaaattatg tattgagtaa gaaaaatcat
     2641 aatttaaatt tagtttatca tagttgtttc gtttttggga tagctaaggt aaaatatatt
     2701 tcatgtttac tttagatgat tgaatgaagg ggagcggaag gatatttatg gaaaccttta
     2761 aagacagact ggttttttta tggaaaagcg aagcgaagca ggcaaaaatc gcatccgata
     2821 ttgaaatgac gattgcgggc ttcagcagga tatggaatga aggcggtctg ccgaagtctg
     2881 aaacattaaa aaaaatcaag cagttgaagg ggtgtagtat cgattggctg ctgaccgggg
     2941 agggtaatcc gtttccggat gaagccccaa aaaaatccct tgcttacgat accttgggaa
     3001 atgaagtcga tacggacgag tttgtctttg tgccgagata tgatattcgg gcggctgcgg
     3061 gatacgggca gtttgtcgat catgaggaac cggtatttac aatggcgttc agacggcatt
     3121 ggattgagaa ttatgttacc cgcgatacga aaaacctgtc tgtaatttcc gtcaaggggg
     3181 attcgatgga gggggttttg aatgacggcg attcgatttt ggtcaatcat ggtgaaaata
     3241 cgccgaggga cggtctgtat gtgttgcgga ttaatgaaaa tctgctggtt aaacgtttac
     3301 agattgtacc gggcgggatt atcaatgtga tttctgcaaa cgaggcttat cctgcttttg
     3361 aaatcaattt gaacgatttg accgatgatg tggagattat cgggcgtgtc gagtggttcg
     3421 gcaggacgat ttgagtttgg ggcttgaaat tgcaggcggt caaacttatc tattggaaca
     3481 attccttttt caaaggcgaa gcctgcttgc ctttaaaggg ggtttgagag agaatgcaga
     3541 aaatattata ttaaggaata acaccatgtc ggatgaaagc cctattattt ttactgacag
     3601 ctgctgtgcc aaagttgccg atttgattgc cgaagaaaac aatcccgatt tgaaattgcg
     3661 ggtttttgtc aatggcggcg gctgttcggg tttccagtac ggatttactt ttgacgaaat
     3721 caaaaacgac gacgattttg aaattgagaa aaacggtttg gtctttttgg tcgatccgat
     3781 gagctatcaa tatctggtcg gtgcggaaat cgactatacg gaaagtttgc agggttcgca
     3841 attcgtcatc cgcaatccga atgcggaaac aacctgcggt tgcggatcgt cgttttccgt
     3901 atgaccgctt ggtttgtgtg atgccgtctg aacgttcaga cggcattttt acttttggaa
     3961 aatatattat cgggatgaat tcacatataa tccgattgtt tgaagatgaa tcgggtttcc
     4021 cgaaaggaac gggcggaacg gtatcaggcg tatttgttcc cttatgattg agatgagtaa
     4081 agattaccga aatgatttgt acgatgtata tgtttcctac ccgccccaag tggatcgcgg
     4141 gcttatccgg gagtgcctca gggagaatct cggcgaggaa aaggcggaag gattgatcga
     4201 atcgctcgat tccaaacctc aagtgctggt tgaggaaaaa tgcacttggg cgaaacggga
     4261 agagttgcat gattatttca gctatttggg tttggatatt attacccgga gatatagtgg
     4321 attaacaaaa accagtacgg cgttgtctcg ccttagctca aagagaacga ttctctaagg
     4381 tgctgaagca ccaagtgaat cggttccgta ctatctgtac tgtctgcggc ttcgtcgtct
     4441 tgtcctgatt tttgttaatc cactacatat ggagttagaa acggtcgtgc cgccggagga
     4501 aggggagggc gaaggagaag gcggggatgg ggaaataccc gaatatcttg aacttcatag
     4561 cgaacgggaa gatgatattt ccgcaccttc gcaagccgaa ccgccgcccc gcaatatcaa
     4621 accgctggtt ttcgggctgc tgatagcctt tttgggctat ctgctcggta agattttttg
     4681 attgtccgat aaatgctgta ttcgggattt tatatatgaa atggttgaaa cgcctgacgg
     4741 ttattgtcgg gactttttac cgctatcggc tggcaggtct gtgcgcttcg ctgatgggta
     4801 gcggttggat atgcgctctg ctgaaaatga tgccgcagtc gtccaaattg aaaaacgaac
     4861 cgcctgccgt ccgtctgcgc cttgccttgg aaagcctggg gccgattttc atcaagttcg
     4921 ggcaggtttt gtccacacgc cctgatttga ttccgcacga ttacgccgtc gaactggcaa
     4981 agctgcaaga caaagtgccg ccttttgacg cgcggctttc gcgtgaacaa atcgaaaaat
     5041 cgttgggtca gtccatcgaa aagctgtatg cggaatttga aaccgagccc gtcgccagcg
     5101 cgtccatcgc ccaagtacac aaagcccgcc tgcattcggg cgaacgagtg gctgtcaaag
     5161 ttttgcgccc caaccttttg ccccttatcg aacaggattt gtcgctgatg cgtttcggcg
     5221 cggtttgggt ggagcgtctg tttgccgacg gcaagcgtct gaagccgctc gaagtggtgg
     5281 cggagttcga caaatacctg cacgacgagt tggatttgat gcgcgaagcc gccaatgccg
     5341 gacagctcgg gcgcaatttc caaaacagca atatgctgat tgtgcccaag gtgttttacg
     5401 actactgcac cagcgacgtg ctgacaatcg aatggatgga cggcacgccg gttgccgaca
     5461 tcgccaaact caaagcagac ggcatcgatt tgcacaaact cgccgattac ggcgtggaaa
     5521 tctttttcac gcaggtcttc cgcgacggct ttttccacgc ggatatgcac cccggcaata
     5581 ttttggttgc cgccgacaac cgctacatcg ccctcgattt cggcatcgtc ggcacgctga
     5641 ccgattacga caaacgttat ctcgccatca atttcctcgc ctttttcaac cgcgattacc
     5701 ggcgcgtcgc caccgcccac atcgaatcgg gctgggtgcc tgccgacacg cgtgcggaag
     5761 aattggaagc cgccgtccgc gccgtgtgcg aaccggtgtt caacaaaccg atttcgcaga
     5821 tttccttcgg cttggtgctg atgcgcctgt ttgaagtcag ccgccgcttc aatgtcgaaa
     5881 tccaaccgca gcttgtgctg ctgcaaaaaa cgctgctcaa catcgaaggc ttgggccgcc
     5941 agctcgatcc cgatttggac ttgtggaaaa ccgccaaacc gtttttggtg aaatggatga
     6001 acgggcaggt cggccctaaa gccctttggc gcaacctcaa aaacgaagcc cccgactggg
     6061 cgcaaatcat cccttcattg ccgcgcaaaa tcagtgcgtt gattgatgaa aaccgccagc
     6121 aggaaatgcg tgatgcctat atccatttgg tcaaagtgca gcagcggcaa agcctgtggc
     6181 tggctgtgat tgcggttgtt ttgctgctga ttttgctttt gaaataggct ttgtccgaat
     6241 catcgcccga ctccgcccgt ttataaggaa atc
//
LOCUS       DBBZXW010000109         6160 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.109, whole genome shotgun sequence.
ACCESSION   DBBZXW010000109 DBBZXW010000000
VERSION     DBBZXW010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6160
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.109"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            297..809
                     /locus_tag="ACJJD2_001823"
     CDS             297..809
                     /locus_tag="ACJJD2_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HGG7580304.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            889..1968
                     /gene="aroB"
                     /locus_tag="ACJJD2_001824"
     CDS             889..1968
                     /gene="aroB"
                     /locus_tag="ACJJD2_001824"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HGG7580305.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
     gene            2535..3377
                     /locus_tag="ACJJD2_001825"
     CDS             2535..3377
                     /locus_tag="ACJJD2_001825"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HGG7580306.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSVEEGLETARAA
                     GVAV"
     gene            3407..3871
                     /locus_tag="ACJJD2_001826"
     CDS             3407..3871
                     /locus_tag="ACJJD2_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HGG7580307.1"
                     /translation="MKCPFCAHPDTRVADSRLMDERNAVRRRRYCPNCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKTDRKA"
     gene            3903..5012
                     /gene="ribD"
                     /locus_tag="ACJJD2_001827"
     CDS             3903..5012
                     /gene="ribD"
                     /locus_tag="ACJJD2_001827"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HGG7580308.1"
                     /translation="MFSETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYRKHAHVRILMPSETAGGK
                     IDLNSLMRLLADEGIGELIVEAGSELTSAFLAEDLADEIVLYRSPKILGSGKDLFSLP
                     ENRAALSAPPLWMPVSTEILGHDIKTVFRKNDNAF"
     gene            5360..>6160
                     /locus_tag="ACJJD2_001828"
     CDS             5360..>6160
                     /locus_tag="ACJJD2_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HGG7580309.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPTDDIGRIVLMQT
                     AAGLTVSALCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRHAPFSPAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFS"
BASE COUNT         1374 a         1987 c         1532 g         1267 t
ORIGIN      
        1 tattgataaa catattatct tcaatatatt caattggata attgtttacc taagcaaaga
       61 taattgcctt ttcctgacaa ataagtgaaa tcaacggatt gtcaaaacac agcctgaaat
      121 aaaaaacctc cctgatttct tttatttgtc cttaaaatca gaaaggttcg ggatggtcgg
      181 gttatttttc caaacgtacc gccgccctgc cgatttcgta taaaattccg ccgtaacccg
      241 acaagcccga accctgtcgc cccgaaaggc ggggtgtcaa acattaagga attgtgatga
      301 aaaactttaa cggcaaactc atcctcatcg gactgatggg cgcgggcaaa accacgctgg
      361 gccggcaaat ggcgcagcgg ctggattacc gtttttacga cagcgatcac gaaatcgccg
      421 cagccgccgg cgttcccatc cccaccatat ttgaaatgga aggcgaacag ggattccgtt
      481 cgcgcgaaac cgccatactc aaaaagctgg ttatcctgcc ccatatcgtc ctgtccaccg
      541 gcggcggcgc ggtgttaaaa gaagaaaacc gcgcccttat ccgcaaaagc ggcacggtcg
      601 tctatctgca cgccccgccc gaaaccctgc tcgaacgcac gcgctgcgac aacagccgtc
      661 ctttgctgca agttgccgat cctttggcga aattacgtga actctacgcc gcacgcgacc
      721 ccgtttaccg ccaaaccgcc gactttaccg tagaatcggc aaactgccgg gaaaccgtgc
      781 aaaccctgct caaacgctta tcccgataaa ccggcatatg cgccgcgccc agaaaaccaa
      841 gccgcgcccc gcccggcggg ccggcggttc aaactttaag gaacaacaat gaaaacactg
      901 accgtacaca ccccgtccca cagctacccc atctttatcg gcaacggact gctgccgcag
      961 gcaggaagcc tgctcaaacc gcatttgggc aaacgcgccg ccatcatcgc caacgaaacc
     1021 gtcgccccgc tctacctcgg cacgcttcag acggcattgg atgcggcagg cgtatcccat
     1081 ttcagcatca tcctgcccga cggcgaggcg cacaaaaact ggcagacgct caacctcatc
     1141 tttgacgggc tgatgcaaaa ccgcgccgaa cgcaaaacca cattaatcgc actgggcggc
     1201 ggcgtgatcg gcgacatggt cggctttgcc gctgccacct accagcgcgg cgcaccgttc
     1261 gttcaaatac cgaccacact gttgagtcaa gtcgactcat cggtgggcgg caaaaccgcc
     1321 atcaaccacc cgctcggcaa aaatatgatc ggcgcattct accagccgca ggcggtgctt
     1381 gccgacttgg acacgctgca caccctgccc gtccgcgaat tgtccgccgg tatggcggaa
     1441 gtcatcaaat acggcgcgct cggcgacatc ggttttttcg aatggctcga acaaaacata
     1501 tccggactga tgacgctcga tcgggaaaaa ctcgcccaag ccgtgtaccg ctgctgccaa
     1561 atgaaggcag acatcgtcgc ccaagacgaa accgaacagg gcatacgcgc atggctcaac
     1621 ctcggacaca ccttcggaca cgccattgaa accgagatgg gttacggcac ttggctgcat
     1681 ggagaagcca tcgccgccgg ctgcgtgttg gcggcgcgtt tgtccgaaca actgggcaaa
     1741 acctccgccg cagataccgc gcggctcgcc gccctgctcg aagccgctgg actgccgtcc
     1801 gcaccgcccg tgtttgcctt tgaaaaatgg ctcgaacata tgagccacga taaaaaagtc
     1861 agcggcggca tcatgcgctt tatcggtctg aaccggctgg gcgaagccaa catcaccgaa
     1921 attaccgaca cggacatcct ccgccgcacc ctgcaaccgt atctctgatt tcctctgccg
     1981 atgtgctgcc gcgcgggttt gacgcacgat gatgattttc catcatcttt ctccgtaaaa
     2041 gcgggaatcc ggtccgttcg gtttcggtcg tttccgataa gttcccgttg cttttcattt
     2101 ctagattccc actttcgcag gaatgacggt ggaaaggttt ttgttgtttc ggagaagttt
     2161 ctgcaaccct agaatctcgt tatttccaca aaaaacagaa acccaaaaca gcaacttaaa
     2221 acctcgtcat tcccgcaaaa gcgggaatcc ggtccgttcg gtttcggtcg tttccgataa
     2281 attcccgttg cttttcattt ctagattccc actttcgtgg gaatgacggc ggaagggttt
     2341 tggttttttc cgataaattc ttgaggcatt gaaattccag attcccgcct gcgcgggaat
     2401 gacagaacct taagtttccg tctttgtttt ctgttttcgc gggaataatg gggaacaaac
     2461 cgtatttcag acggcatttt cagttcgggg tataatccga atacttgcga ccatctgaat
     2521 cattgggaca aactatgtgt caactgctgg gcatgaactg caatacgccg accgatatta
     2581 tgttttcctt tgaaggcttc cgccggcgcg gcggcattac cgaccatcat gccgacggtt
     2641 tcggcatcgg ctttttcgaa ggcaaaggcg tgcgcctgtt ccatgacgac aaacccagtg
     2701 ccaattcgcc cgtcgccgac ctcgtgcgcg cctaccagat taaatcggaa aacgtcgtcg
     2761 cccatatccg caaagcatcg caaggacaaa cctcgctggc gaacacccat ccctttatgc
     2821 gcgaaatgtg gggtggctac tggctgtttg cccacaacgg gcatttgatt gattttttcc
     2881 ccgaacaggg cgaatttttc caccccgtcg gcacaaccga ttccgaacgc gcgttctgcc
     2941 acatcctcaa ccgcctgcgc acccgctttg ccgcccgtcc cgacgacgac acgctgtttg
     3001 acgcgattgc ggggctgacg cacgaaatcc gcaagttcgg gctgtttaac tttatgcttt
     3061 cagacggcat tgccctgttt gcccacgcca gcacactgct gcactacatc gtccgccaag
     3121 ccccgttcgg caaggcgcgc ctgctcgacg acgacgtgat ggtcgatttt gccgaagtaa
     3181 ccacgccctc cgaccgcgtc gccgttatcg ccaccctgcc gctgacccgc gacgaatcat
     3241 ggtcccaact tgccgtggac gaactggtca tgttccgcga aggcaacatc gtccgacacg
     3301 accgtcccga aaaccccgtt tatatgagtg tcgaagaagg tttggaaacc gcgcgcgccg
     3361 ccggcgtcgc cgtctgaact tcagacgaca taggaggacg aacccgatga aatgcccgtt
     3421 ttgcgcccac cccgacaccc gcgttgccga ttcgcgcctg atggacgaac gcaacgccgt
     3481 ccgccgccgc cgatactgcc ccaactgcgg caaacgcttc ggcacgctcg aaaccgccga
     3541 actcaaaatg cccgccgtca tcggtccgga caaaaaacgt tcgcccttta atgcacaacg
     3601 cctccgcaac gacctgaccg ccgccgcccg aaaatccgcc ctgacacccg aacagatcga
     3661 cgaaaccgtc cgcctgacgg aacacaggct ctacacttcg ggtcagcgcg acatcccctc
     3721 tgccgcactt gccgacatgg tgctaaaaga actgctccga caagatacgg aagccgccgt
     3781 ccgtttcgcc gccctgcaca aacgcttcga caatccggca gactttgcct cgtggctggc
     3841 gcaagccgtc aaaacagacc gcaaagcctg attcccccaa cccatactga tacggtatcc
     3901 ccatgttttc cgaaacagat atttctatga tgcaaaacgc cctcaaactt gccgctttgg
     3961 ggcgtttttc cacttcgccc aatccgcgcg tcggctgcgt tatcgcacaa ggcagccaaa
     4021 ttgtcggaca gggcttccac gtcaaagcgg gcgaaccgca cgccgaagtc cacgccctgc
     4081 gtcaggcggg cgaaatggca caaggcgcga ccgcctttgt taccctcgaa ccgtgcagcc
     4141 attacggacg cacaccgccc tgcgccgaag ctctgctccg ttccggcgta acacgcgtcg
     4201 ttgccgccat gcgcgacccc aacccgctgg ttgcaggcaa agggcttgcc ctgctcgaag
     4261 cagcaggcat caagacggaa tgcggtttac tcgaacatca ggcaagggaa ctcaaccgag
     4321 gcttcctgtc gcgcatcgaa cgccgccgcc ccttcgtccg cctcaaatgc gccgtttcgc
     4381 tggacggcaa aaccgccctt tcagacggca gcagcttttg gattaccggc gaagacgcgc
     4441 gtgccgacgt acaggttttg cgtgccgaaa gctgcgcggt gctgaccggc atcggcacgg
     4501 tgttggcgga caatccccgg ctcaacgtcc gcgcttttcc aactttgcgc caacccgcac
     4561 gcatcgtgtt agacagccgc ctgcgcctgc ccttggacag ccaccttctg accgacggac
     4621 aatctccaac ctacatcgcc accttggaac gcgatgaaga caaactccgc ccctatcgca
     4681 aacacgccca cgtccgcatc ctgatgccgt ctgaaacggc aggcggcaaa atcgatttga
     4741 acagcctgat gcgcctgctt gccgacgaag gcatagggga actcatagtc gaagcaggct
     4801 ccgaactcac atctgcattt ttggcagaag atttggcaga cgaaatcgtg ctgtaccgtt
     4861 cgcccaaaat cctcggcagc ggcaaagacc tgttttccct gcccgaaaac cgcgccgccc
     4921 tttccgcacc gcccttgtgg atgcccgttt ccaccgaaat cctcggacac gacatcaaaa
     4981 ccgtgttccg gaaaaacgat aacgcctttt aaagggtttg cgccgtttca ctatataata
     5041 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg
     5101 aaccgattca cttggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcaagc
     5161 caacgccgta ctggtttttg ttaatccact ataacgccga taaaaaacgg ccccgttcag
     5221 accgccgccc gcccggaaaa gcgcaacccg gactgccgca ccccgccggc agccgcgacg
     5281 gtctgaaagc cgtcaaattc caatcaagaa aggcttcaga cggcacaggc agcatcccgc
     5341 ctccgtccgg acatcaaaaa tggacacaaa agaaatcctc ggctacgcgg caggctcgat
     5401 cggcagcgcg gttttagccg tcatcatcct gccgctgctg tcgtggtatt tccccaccga
     5461 cgacatcggg cgcatcgtgc tgatgcagac ggcggcggga ctgacggtgt cggcattgtg
     5521 cctcgggctg gatcaggcat acgtccgcga atactatgcc gccgccgaca aagacacttt
     5581 gttcaaaacc ctgttcctgc cgccgctgct gtctgccgcc gcgatagccg ccctgctgct
     5641 ttcccgcccg tccctgccgt ctgaaatcct gttttcgctc gacgatgccg ccgccggcat
     5701 cgggctggtg ctgtttgaac tgagcttcct gcccatccgc tttctcttac tggttttgcg
     5761 tatggaaggg cgcgcccttg ccttttcgtc cgcgcaactc gtgcccaagc tcgccatcct
     5821 gctgctgctg ccgctgacgg tcgggctgct gcactttccg gcgaacaccg ccgtcctgac
     5881 cgccgtttac gcgctggcaa accttgccgc cgccgccttt ttgctgtttc aaaaccgatg
     5941 ccgtctgaag gccgtccggc acgcaccgtt ttcgcccgcc gtcctgcacc gggggctgcg
     6001 ctacggcata ccgatcgcac tgagcagcat cgcctattgg gggctggcat ccgccgaccg
     6061 tttgttcctg aaaaaatatg ccggtctgga acagctcggc gtttattcga tgggtatttc
     6121 gttcggcggg gcggcattat tgttccaaag catcttttca
//
LOCUS       DBBZXW010000110         6062 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.110, whole genome shotgun sequence.
ACCESSION   DBBZXW010000110 DBBZXW010000000
VERSION     DBBZXW010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6062)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6062)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6062
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.110"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            54..179
                     /locus_tag="ACJJD2_001829"
                     /pseudo
     CDS             54..179
                     /locus_tag="ACJJD2_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(329..1372)
                     /gene="argC"
                     /locus_tag="ACJJD2_001830"
     CDS             complement(329..1372)
                     /gene="argC"
                     /locus_tag="ACJJD2_001830"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HGG7580310.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPDLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLDAIPLLP"
     gene            complement(1369..1650)
                     /locus_tag="ACJJD2_001831"
     CDS             complement(1369..1650)
                     /locus_tag="ACJJD2_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580311.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPADFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSTANQNPVGQRSDGIPANHTKEKP"
     gene            2018..3172
                     /locus_tag="ACJJD2_001832"
     CDS             2018..3172
                     /locus_tag="ACJJD2_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG7580312.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAARNLEAASWKDINEI
                     YQRADPTAPLFYLRKKGAIVPKEEYVESFDALGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHISRQVARFAGAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKHEEVRKLIYQLIELDFLELL"
     gene            3181..3387
                     /locus_tag="ACJJD2_001833"
     CDS             3181..3387
                     /locus_tag="ACJJD2_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580313.1"
                     /translation="MKNWKQFTFFVILVIACYQVLYFLSDMFLLDYINKYSWNLNFIQ
                     GTLNFFSIYLPYVFVSRIFRNTNQ"
     gene            3592..3852
                     /locus_tag="ACJJD2_001834"
     CDS             3592..3852
                     /locus_tag="ACJJD2_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HGG7580314.1"
                     /translation="MERKNNIIELSIENLELIYGGGLGERILEGGANGAQIGGSIGAG
                     IGLGVGIVSGGIPAGPAIILGGTVGAAVGAVTGMGVAAYEYY"
     gene            4012..4638
                     /locus_tag="ACJJD2_001835"
     CDS             4012..4638
                     /locus_tag="ACJJD2_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HGG7580315.1"
                     /translation="MNRPKQPFFRPEVTVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITTKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRAANLFIL"
     gene            4542..4790
                     /locus_tag="ACJJD2_001836"
                     /pseudo
     CDS             4542..4790
                     /locus_tag="ACJJD2_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFP transporter"
     gene            5103..5405
                     /locus_tag="ACJJD2_001837"
     CDS             5103..5405
                     /locus_tag="ACJJD2_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580316.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            5689..5841
                     /locus_tag="ACJJD2_001838"
                     /pseudo
     CDS             5689..5841
                     /locus_tag="ACJJD2_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117473.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
BASE COUNT         1650 a         1289 c         1480 g         1643 t
ORIGIN      
        1 aatgactgaa accggagaaa tgacgaaatt gaagcgtgtg gaaatgtgtc ggaaatcgct
       61 gaagccggat aaactatagt ggattaaatt taaatcagga caaggcgacg aagccgcaga
      121 cagtacagat agtacggcaa ggcgaggcaa cgctgtactg gtttaaattt aatccactat
      181 agattcccgc ttttgcggga atgacgggat tttagatttt tgttttcgcg gaataatgag
      241 ccaaaagccg tctgaaccta aaaaaccgcc actttcagat ggcatcaaaa aaccgcaggc
      301 acgatacctg cggtttgccg tttgcgtttc aggggagcag ggggattgcg tccaagccgt
      361 gtgtttcctt cagtccgaac atgatgttca tattttgcac cgcctgaccc gccgcgcctt
      421 tgacgaggtt gtcgatgacg gaaaggacga cccacacatc ggattgcgcc gcctgttgga
      481 tgctgatgcg gcagaggttt gcgccgcgca cgctgcgggt ttcgggtgtc gaaccggcgg
      541 gcaggatgtc cacgaacagg ctgtcgcggt aatagtcgcg caggatggtt tcggggcaga
      601 tgccgtctga aaggtggagg taaacggtgg cgtgcatacc gcgtatcatc ggcgcgaggt
      661 gcggcgtgaa cacgaatcct tcggcgatgc cgtcctgaag cccggcgatg gtctgcctga
      721 tttcgggcag gtggcggtgt ccagctatgc cgtaggcttt gaagttgtcg ccgacttcgc
      781 acaacagcga accgacattg cctttcctgc ccgcgccgga cacgccggat ttgcagtcgg
      841 caatcagcgg cataccgggc ttcagacggc attgccgcaa cagcggcacg agcggcaggg
      901 atacgcaggt cgggtagcag ccggggttgg cgacgaggcg tgcctgtgcg acggcttcgc
      961 ggttgagttc gctcaatccg tacacggctt gggaaacgag gtcgggggcg gcgtgggtca
     1021 tgccgtacca gtgttcccag gtcggaatgt cccgtatgcg gaagtcggcg gaaaggtcga
     1081 tgacgcgcac gccctgttca atcaggcgcg gcgcgtcttt catggcgatg ccgttgggcg
     1141 tggcgaagaa gacgatgtcg cattgttcca aacctgcctc gtcgggcgtt tggaaggcga
     1201 ggccgtacac gccgcgcaaa ctcggaaagt aatcggcaac tgcagttccc gcttcgctgc
     1261 ggctggttac ggcggcgact tcgacatcgg gatgggcggc aagcaggcgc agcagttcca
     1321 cgcccgtgta gcccgtcgcg ccgacaatgc cgactttgat ttttttactc atggtttttc
     1381 ctttgtgtgg ttggcgggta tgccgtccga acgctgtccg acggggtttt gattggcggt
     1441 ggaaggacgg tacacaaagc gtttgaaaag cgtgtctaat ttaatggcat ccgcctctgt
     1501 ttttaaaacc cagccctgcc gtccggaata aacataaccg taggcgcgaa agtcggcagg
     1561 atatttcggt gcctgcccca aacccaaacc gtatgcggcg aaagcggtgg tcgtggagaa
     1621 ggaaagcagg aggaggacga gggttttcat aaggttccaa accggacggg gcgatgaagc
     1681 ccgattatag caaaaggtcg tctgaaaacc gttttcagac gaccttttat ttaattacaa
     1741 taaaaatgtt aacaacaaaa aacaaaccgc tttttttcgt ttggaaacaa aacaaatttt
     1801 tatagtggat taaatttaaa ccagtacagc gttgcctcgc cttgccttgc cgtactatct
     1861 gtactgtctg cggtttcgtc gccttttcct gatttttgtt aatccactat aactaaaatt
     1921 gtcaacaatt ccttgacgca cacacaaaaa aaactttaat atttgtaaat atatgtaaca
     1981 ttataaattt taaatatttt ctgagtaagg ggaagtaatg agcatccatc tcgacttcgg
     2041 cattagtcct aaaacgttcc gacagactta tctgtatcaa aagcccaagc tctttaaagg
     2101 agcggctcgg aatctcgaag ccgcatcttg gaaagatatc aacgagatat accaacgagc
     2161 agacccaacc gcaccgctgt tttatctgcg taaaaaaggt gcaattgttc ctaaagaaga
     2221 atacgtcgaa agtttcgacg ctttgggcaa aactcgctac cgttttatta aatccgttat
     2281 ctacgaacat atgaagaatg gtgcgtcgtt agtctataac catattaaca acgagccgtt
     2341 ttcagatcat atttcccgtc aagtcgcccg ctttgctggc gcacatacta ttgtcagtgg
     2401 atatcttgct tttggcagcg acgaatctta taaaaaccat tgggacaccc gcgatgtgta
     2461 tgccatccag cttttcggca agaaacgttg gcaacttact gcccctgatt tccctatgcc
     2521 attgtatatg caacagacta aagatactga tatttccatt cctgaacata tcgatatgga
     2581 tattatcctt gaagcaggtg atgtcctcta catcccgcgc ggttggtggc acagacctat
     2641 cccgctcggc tgtgaaacct tccacctcgc tgtcggtacc tttccgccca acggctataa
     2701 ttacctcgag tggctaatga agaaattccc cacgatagaa agtctgcgcc acagtttctc
     2761 agactgggag caagatagga cgcgtatcaa cgatactgcc gcacaaattg ctgccatgat
     2821 tgccgacccc gtcaattacg aagccttcag tgaagacttc ctcggcaaag aacgcaccga
     2881 taccgctttt catctcgaac agttcgcgaa tcccaacgct actccgcttt cagacgacgt
     2941 caggttgaga ctaaatgcca ataatttgga tacgttggaa aaggggtatt tgattgggaa
     3001 tgggatgaag ataagcgtag atgaattggg gaaaaaagtt ttagaacaca tcggtaagaa
     3061 tgaaccgtta ttgttgaaaa atctactggt taacttcaat cagggaaaac atgaagaagt
     3121 taggaagttg atttatcagt tgatagagtt agattttctg gaacttttgt gagggattct
     3181 atgaaaaact ggaagcaatt tacatttttc gtaatattag taatagcttg ttatcaagtg
     3241 ctatattttt tatcagatat gtttcttctc gactacatta acaaatatag ttggaatttg
     3301 aattttattc agggtacttt gaattttttt tcaatatatc tgccatatgt ttttgttagc
     3361 cgaattttta ggaatactaa ccaatgaaag actaggctat gaaatcaaaa tttatgtata
     3421 agttactggt acttgcaaag tacctgtata ttttaatttg tatatcaata ccaatcgttt
     3481 ttatttatga aagctaccaa ggagatgatg ttgattttat gatttatatt catgctttta
     3541 ttattttttc catattgggt gtattgactc aatattctac gtctaatttt tttggaaagg
     3601 aaaaataaca tcattgaact atccattgag aatctggagc taatttatgg cggaggctta
     3661 ggggagagaa tccttgaagg aggagcaaat ggtgcacaaa taggaggatc aattggtgca
     3721 ggtattggtc tgggtgtcgg tatagtttct ggtggtattc ctgccggacc ggctattatt
     3781 ctcggtggca cagttggtgc tgctgttggt gctgtaactg gtatgggtgt tgcagcatat
     3841 gagtattact aagaaactca gcccaaaggg acagtaacgg tcggtccgat ttctgctttt
     3901 gctgtggaca aatcaggaaa cggctacact gacggtacag attactgctg atatttctca
     3961 tctttcagac gatctctagg ggtcgtctga aactttctta acttcaattt tatgaataga
     4021 cccaagcaac ctttcttccg ccctgaagtc acagttgccc ggcaaaccag cctgacgggt
     4081 aaagtgattc tgacacgacc gttgtcattt tccctatgga cgacatttgc atcgatatct
     4141 gcgttactga ttatcctgtt tttgatattt ggtaactata cgcgaaagac aacagtggag
     4201 ggacaaattt tacctgcatc gggcgtaatc agggtgtatg caccggatac ggggacaatt
     4261 acaacgaaat tcgtggaaga tggagaaaag gtcaaggctg gcgacaagct atttgcgctt
     4321 tcgacctcac gtttcggcgc aggaggtagc gtgcagcagc agttgaaaac ggaggcagtt
     4381 ttgaagaaaa cgttggcaga acaggaactg ggtcgtctga agctgataca cgagaatgaa
     4441 acgcgcagcc ttaaagcaac tgtcgaacgt ttggaaaacc agaaactcca tattttgcaa
     4501 cagatagacg gtcagaaaag gcgcattaga cttgcggaag atcagtggca aaaacggcac
     4561 tgggcagaca ggaattgtcg ggattgggca tggtatcctc cgatttggcg aagagcagcg
     4621 aacctgttta tcttgtgaaa ataaaacccg acaaatcaac catcactgca tacggtgagg
     4681 aaaaaccgct gcaaatcggc atgacgttgg aagcagacat cctgcacgag aaacggcgat
     4741 tgtacgaatg ggtattggag ctgatttata gtatatcggg caaactgtaa gacttgaggc
     4801 tgaaagataa agaagttgtc tgaaaccttt tcagacgacc agaagacaat atataaaaac
     4861 acaaacttca aaactgcctg aaaccatcct cttttacagg cactccgtct gtaaaagcaa
     4921 ggatagggca tctgcccttt tgattgtttg attaacgata caaggagttt caaaatgaga
     4981 gttttatagt ggattaacaa aaaccagtac agcgttgcct cgccttgccg taccatttgt
     5041 actgtctgcg gcttcgtcgc cttgtcctga tttaaattta atccactata tgtgttcatg
     5101 aaatgacttg ggtcggaggc tcaggtaatg cgcaacaaag ttcatattat tgcgaaattt
     5161 gcgaatctgc agggcttaac gatacgggaa atcctgataa atctttagga ttgccaaaca
     5221 atacgttcag taatccgcct ggttggggag ctacaatcgg agctttagca ggtagccgca
     5281 tagggatgcc tgaatttggt acgtttgcga gccatgccat tgaaaatttc gactggtcat
     5341 ggtatcgacg ttatagggaa attgccgaaa cgattgaacg agaatattca ggcggtttgc
     5401 cttaatagtt gaggaggtca tgatgtttgc caaacattat caattcatcg cactcggcat
     5461 catgctgctt ctttatatgt tgattctcta tacgaccgat ttttccaatc tgacgtattg
     5521 gatgctgttt tttatctgtt ttattacagg aaaaatatta gctcgtttgt tagagaaaag
     5581 ctttaaataa aatagcagct agtcgcaaaa ggtcgtctga aaccttttca ggcggccttt
     5641 ctaaaataca tccaacttcc taatccctat ttttcaaaaa ggaaatctat gccccatctg
     5701 caaaacctgt ctttgggctt aaagaaaaag ctgcctgtta tcctgcaaac agaaatatca
     5761 gaatgcggct tggcatgtct ggcggctgtg gcgggatttc atggtttcca tacgaattta
     5821 cgcgcactgc gttcaaaata ctgtccgaga cctttgcaaa attccccaaa atcccctaaa
     5881 tgtcttggtg ggaattttgg ggaattttgc aaaggtctca ttctataact gtaaatactt
     5941 ttaaatttat gacaaaatag taaatattgc taaaataata ttgatgtcat gaaatttttt
     6001 cctgctccat gtctgttggt tatcctggct gtcatacccc ttaaaacctt agctgccgat
     6061 ga
//
LOCUS       DBBZXW010000111         6023 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.111, whole genome shotgun sequence.
ACCESSION   DBBZXW010000111 DBBZXW010000000
VERSION     DBBZXW010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.111"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="ACJJD2_001839"
     CDS             complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="ACJJD2_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HGG7580317.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="ACJJD2_001840"
     CDS             complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="ACJJD2_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HGG7580318.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSLEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAYEHEMAIRHASEAGITGSNDSQH"
     gene            complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="ACJJD2_001841"
     CDS             complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="ACJJD2_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HGG7580319.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEANLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPAVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1356 a         1706 c         1613 g         1348 t
ORIGIN      
        1 aaagaaatgc cgtctgaaac cttatcgttt cagacggcat tttattgccc gaccggttat
       61 ttgtcggttt gggtatcccg tttcaatccg ccgccgagtg ccttgtacaa atcggcaagg
      121 ttttcggcgc gggtcagttg tgccgacaaa gccgcaccct ccgccgcata gctgctgcgt
      181 tccgcatcga gcaagtcgag cgcgccggat acgccgtgct tgtaacgcag gccgaccaag
      241 cgcaacgctt ctttagaggc gcggctttgt ttgcttaaag cgtcataggc tttatccagc
      301 tgctcgcgcg ccgccaatgc gtttgccacg tcttgaaatg cggattggac ggcggattca
      361 taggcaacga tttgtgcctg ttggcgcagc ttggctacat caaggttcgc cttgttcgta
      421 ccccaggtaa aaatcggcag ggtaatagac ggcgcgaacg accaaacgcc cgtgccgctt
      481 ttgaacaacc cacccaattc ggcagaaccc gtaccgacgg ttccggtcag gcggatggat
      541 gggaaaaagg cggcgcgtgc cgcaccgata ttggcgtttg cctgtttgag cgcgtgttcg
      601 gcggcgcgta tgtcgggacg gtcgagcaat acttcggaac tcaaaccggc cggcagtttt
      661 tcaacaaaaa actgcttgtc caacggcaaa ccggcgggca ggtcgtcggg tatcggttgg
      721 ttaatcaagg ttgccaaggc attgcgcgcc tgttcgcggc tgcgcgcggc atgggcataa
      781 tcggctttgg cagattcgat tagggcttcc tgctgacgta gggcgacggc ggaaatcacg
      841 cctgccttgt aacgtaattc ggacagcttg taggtttcct cgcgcgtttt caaaacacgt
      901 tgcgccaaag acatcgcttc ttcggcgtaa cgttcgttga aataggcttt ggcaacggtg
      961 gcaatcaggc tcaaatgtgc cgcatcgcgg ttggcggtgc tggcgaaata gccttgcagt
     1021 gccgcctcgc tgctgctgcg tacacgcccg aacagatcga gttcgtaaga tgccgcaccc
     1081 agtccgactt tgtagctgct gcttacattg ccgccgctca agctgccttg gcgcgagtcg
     1141 ttcgcattgg cggcaagcgt gggcaggagg ttgttgcgct caatcatgta ttgtttgcgg
     1201 tagatttcgc tgttcaatac ggcggtacgc aaactggtat tgcgctcgag tgcgatgtcg
     1261 atcagctttt gcaggcgcgg gtcggcaaaa tagtcatgcc aacctaaatc gaccgcacgg
     1321 atgccgctgt cggcggtatc gtttttgaac gtttcggcaa cttcgacttt gggctgctcg
     1381 tattggggaa tcatggtgca ggcggataat gcgaaggctg ctgcaacaga agtcaaggtg
     1441 gttttcaatg tagtatccat aaaaaagtcc tgatgccgtc tgaaaacccg taggcgttca
     1501 gacggcatgg ttgcttaatg ttggctgtcg ttcgaaccgg ttatgcccgc ttctgatgca
     1561 tgtctgatcg ccatttcatg ctcgtatgca gtttctttga agaatttgcg caccaccaca
     1621 tagaaaagcg gaacaaggaa cacggacaag agcgtgccga tgagcatccc ccagaatacg
     1681 gttgtaccaa tggcgcgctg gctggcagaa cttgcaccgc cggcaatata caggggaacc
     1741 acgcccaaaa taaaggcgaa cgaggtcatg ataatcggac ggaaacgcag gcgggctgct
     1801 tccaaagcgg cttcaaccgc gcttttccct tgcgcttgaa ggtctttggc aaactcgata
     1861 atcaaaatcg cgtttttcgc actcaaaccc atcacggtaa cgaaaccgac ttgaaagtag
     1921 atgtcgttgg cgaacgaggg aacgctgccc aacagtcctt caaacaggtt gcgcccggtt
     1981 acgcccgcag ccgcaccgat caaacccaac ggaatcacaa ggatgaccgc cagcggaatc
     2041 gaccagcttt cataaagcgc ggcaagtacc aaaaatacgg ctgcaaccgc caaaccgtac
     2101 aaaatcaggg tttgcgagcc gccttttgcc tcttcgcgcg actgtccgcc ccactccagg
     2161 ctgtaaccgc cgcccaattc gtcaaccatt ttttgaaccg ccgccatagc ctgcccggtg
     2221 gaaacgccgg ttgcaggcga agcggacagc ttcatcgaag gataaccgtt gaagcgtacg
     2281 ctctgttccg taccgttttc ccaagaaaca gtagcaatgg tggaaagcgg tacggcgacg
     2341 ccggatttgt tcggcacggt caggttcaaa atatcggcag gctgcatacg ggcatcctcg
     2401 tcggcctgca ccatcacgcg ttgcagacgg ccttggttcg ggaagtcgct gacataagac
     2461 gaactcagcg cacttgccaa tgcggtgcgg atgtcggcaa acgaaatgcc ttgcgccgcc
     2521 gcggcggcac ggttgatgtc gattttcaac tgcggcgagt cttccaaacc gccggcacgg
     2581 acggtgctgg ggtcaaacaa accgctggca cgcattttct gaatcaactc gttgcgcttc
     2641 gccagcaatg cggtatggcc ggtattgttg cggtcttgca ggttgatgct cagacccgaa
     2701 ccgttgccca actccagaat cggaggcggg acgacggcga tgccaaaacc gtctttaagc
     2761 gtccccatca tcatacccgt cagcttgccg gcaatcgcaa cggcatcgct gccgggcgcg
     2821 gtacgctcgt tccaatcttt caatatggca aaacccatcg ccatattctg accgctgccc
     2881 gaaaagctga agccggaaac ggtaatgatg ttttctattt caggaatgct tttcgccagt
     2941 tgggtaactt gcgccaaagt cgcattggtg cgctcttggg tcgctcctgc aggcagttgc
     3001 acgctgacca tgacgaagcc ttggtcttcg gtcggcagga atgaagtcgg cagacgcata
     3061 aacaggaaca cgcccacaac cgccaagccg atatagacaa ccatcatgcg gaaagtctta
     3121 cgcagcactt tggcaacccg gccttcgtaa ccgtgcgtcc aactgttgaa tttcttgtta
     3181 aaccagccga agaaaccttt tttctcttcg tgatgccctt tcgggattgt cttcaacatt
     3241 gtggcacaca aagcaggggt aagggtcagc gcaaggaagg cggagaatgc gattgatgac
     3301 gccatcgtca gggcaaactg tttgtaaata ttgcccgtcg ccccgctgaa catcgccaac
     3361 ggtacgaaca cggaaatcag aacggcggta ataccgatga ccgcgcccga aatctgaccc
     3421 atcgcttttt tggtcgcttc tttgggcggc aagccttcac ccgccataat gcgctcgacg
     3481 ttttcaacca ccacaatcgc gtcatcgacc acgatgccga tgaccaaaac catcgcaaac
     3541 atggtcagta cgttaatcga catgcccata taagagatga aggcgaaacc gcccaacagc
     3601 gaaatcggta cgacgatggt cggaatcagc gtataacgga tgttttgcag gaagagatac
     3661 attacgacaa acaccagcac catcgcttcg attaaagtat gaatcacttt ttcaatcgaa
     3721 atttcgacga atttggaagt atcgtaaggg gttttccagc tcataccctg aggaaagtat
     3781 ttttccaacg tcgccatgcg ttctttaacc gcctttgccg tcgccatcgc attgccgctg
     3841 ttggacagca tcaccgccat accggtggta tttacaccgt tcagacgggt tgaggaagaa
     3901 tagtcttcca tacccagtcc gacccttgcc acatccttca ggtaaacatt agaaccgtcg
     3961 gtattggcgc ggaggatgac gttgccgaat tcttctgccg tacccaactg cccttgcgcc
     4021 gttacggtag ccgtaaccgt ctgtccgcga acggcgggaa gcgaaccgat agaacccgct
     4081 gaaatctgga cgttctgggc ggacagcgcg ctgccgatat cggcaaacga caaattgtag
     4141 ttttgcagtt tcttaggatc aacccaaatc cgcatcgcgc gttgcgcgcc gaacaggcgt
     4201 acctgcccca cgccttcgat acgctgcagt tcgggaacga tattacgctg cgcgtagtcg
     4261 ttcatctctt cggttgactg cacatccgac gaaagcatca caatcatcag gaaattggaa
     4321 cgcgccttgg atacggttac gccgtattgc tggacggttg ccggcagcgt gctcaatact
     4381 tcggaaagct tgttctgcac ttccacctgc gccagattct cgtcggtatc gggcgtaaag
     4441 gtcaggctca cgctgccgct gccgctcgaa tcggcggaag tggacatata atccaaacct
     4501 tccacgccgt tcatattccg ctcgatcacg gaaagcacgc tgtcttccat tacctgcgcg
     4561 gacgcacccg gataagtggc gtgcaaagta atggtcgggg cggcgacaga cggatattgc
     4621 gaaacaggca ggcttttgat gccgaaaata cccgccgcaa taatgaaaat cgaaataacc
     4681 cacgcaaaaa tagggcggtc gataaaaaat ttagccatcg atgccttcct tattccgctt
     4741 cagaagcagt tttggcttca gatgccgtct gaacgccgga ttgaggcgcg gcggcttggt
     4801 tttcagacgg cgcccattct ttgggcgtta cctttttcgc acccgttata ccggcgatac
     4861 tgatgccttc cacaaccacc ttgtccccgt ccttcagacc cgacgtaaca atccaattcg
     4921 taccctgctg ttgcgcaacc gttacctcgc ggggttccat accgccttgg gcattcacaa
     4981 tcatcacggt atctttcgca ccgcgcgtta ccgcctgctg cggcacaaca aatgcgttat
     5041 ccaccgccac ttggtccatc agcacgcgca catacaggcc gggcatcagg atattctgat
     5101 cgttcggtac ggcggcgcgc agggtaatct gaccggtcga ttcgttgacg gccggatcgg
     5161 caaacagcag gcggcctttt tcagggtaaa ctgtgccgtc gtcaaatttg atgccgaccg
     5221 caatcacacc atccgccgcc agcagtttgc cttcggctat ctgacggcgc agtttcatca
     5281 cttcggatgc agactgggta acgttcacat acatcggatt ggtttggcgg atggttgcca
     5341 gcacggtcgt atcgcccgca ttcaacagcg taccttcgga aactttggac tgaccgataa
     5401 agccggaaat cggcgcggta atgcgcgaac ggttcagatt aatgccggca gatttgattg
     5461 ccgcctgtgc tgctttgaca cctgcctcgg cagaacgttt cgccgttacc gcagcatcgt
     5521 attcctgccg gctgacggct tcggcggcaa ccaaaggctt gtatcgcgcc aaatccgcat
     5581 ccgctttggc aagcgttgcc tgagccgttg ccagttgcgc gcgcgcgctt tccagatttg
     5641 cttcataagt ggaactgtcg atctgataca gcggctgtcc ggcacggaca taactgcctt
     5701 cttggaacag gcgtttttgg ataatgccgc caacttgcgc acggacatcg gcggtacgca
     5761 gcgattccaa acgtcccggc aactcgacgg tcaacgcaac ggtttgcgga tggacggtta
     5821 cgacaccgac gacgggagcc ggtgcttccc gacccgcagg ctgcccgccc tgcgccgcgt
     5881 ctccgccttt accgcaagac gacagtacca atgcaacggc ggcagccaac gcggccgcac
     5941 gcatcgcctt aaaagcataa aaagccatta tttatcctat ctgtctggtt tgatgtaaag
     6001 ggttttgcca atcaacaggc att
//
LOCUS       DBBZXW010000112         5836 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.112, whole genome shotgun sequence.
ACCESSION   DBBZXW010000112 DBBZXW010000000
VERSION     DBBZXW010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5836
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.112"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..577)
                     /locus_tag="ACJJD2_001842"
     CDS             complement(<1..577)
                     /locus_tag="ACJJD2_001842"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HGG7580320.1"
                     /translation="MEHKLPQLPYEPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFA"
     gene            741..2147
                     /gene="dnaB"
                     /locus_tag="ACJJD2_001843"
     CDS             741..2147
                     /gene="dnaB"
                     /locus_tag="ACJJD2_001843"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HGG7580321.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
     gene            2456..3124
                     /locus_tag="ACJJD2_001844"
     CDS             2456..3124
                     /locus_tag="ACJJD2_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HGG7580322.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTVNNKCDSGKKGQGMLAFGDKNGNK
                     GYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTTDRVVWTFNQNGTFGYTK
                     DQHLTKQSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTV
                     CQYK"
     gene            3154..3768
                     /gene="pilV"
                     /locus_tag="ACJJD2_001845"
     CDS             3154..3768
                     /gene="pilV"
                     /locus_tag="ACJJD2_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HGG7580323.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSAVDGDFAVDA
                     VKSKKDLAKAQLDRFGYELKNALQDAAAIYYAVCKDSSGAAPTLSAGSTFSSNCDNKA
                     NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE"
     gene            3765..4733
                     /locus_tag="ACJJD2_001846"
     CDS             3765..4733
                     /locus_tag="ACJJD2_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HGG7580324.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKDVVSDVPQKNRL
                     FSLKGSSANKLIPNGTDNKLIPITESLDINYQNFFQVGSALIFQYGIDDVNASAATTV
                     VSSCAAISKPGKQILTLENVKKELKISDQDKEQNGNIARQRHVVNAYAVGRIAGEEGL
                     FRFQLDDKGKWGNPQLLAKKIRYMKVRYIYVSDCPEDDDAGKEETFRYTDKFNSAQDA
                     VTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            4712..5305
                     /locus_tag="ACJJD2_001847"
     CDS             4712..5305
                     /locus_tag="ACJJD2_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HGG7580325.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRFCPANSTDLCIDKKGMEYKKGKGSVSKPPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            5310..5783
                     /locus_tag="ACJJD2_001848"
     CDS             5310..5783
                     /locus_tag="ACJJD2_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HGG7580326.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIERGYQSQLYTE
                     MVGINNISKQFILKSPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEAFSNRKK"
BASE COUNT         1556 a         1306 c         1526 g         1448 t
ORIGIN      
        1 cggcgaagcg tttggcgact tcgtcccagt tgacgatttc ccagaaacct ttcaggtagt
       61 tggggcggct gttgcggtag tcgatgtagt aggcgtgttc ccacacgtcg caggtcagca
      121 gcggcgtgtt ttcagtggtc agcggcgtag cggcgttgga agtggaaacc aaatccaatc
      181 cgccggcagg ggttttcacc agccatgccc aaccggagcc gaaagtaccg gccgcgcagg
      241 cattgaacgc ttcttggaat ttctcgaagc tgccccattt cgcgtcgatg gcggcggcca
      301 gttcgccgga aggtttgcct tgacctttgg gcgtgaaacc cagccagtag aaggtgtggt
      361 tccaagtttg tgccgcgttg ttgaacacgc cgcccgaaga ttttttcaca atctcttcca
      421 aaggcaggtt ttcaaattcg gtgcctttga tttgattgtt caggttggtg atgtaggttt
      481 gatggtgttt gccgtagtgg aattccaaag tctctttgct cagatgcggg gacaatgcgt
      541 ccggttcata aggcagttgc ggcagcttat gttccatttt gtgctcctaa tgttgttttt
      601 ggatgttgtg ttttggcagt gttgctgcaa acgaatcggc agcacacgca ttctacctgt
      661 tttgagggat ggaaaccaat tgaacctgct ttacgctata atagaagatt gcaatttcgg
      721 cacgacagat aggatgtacc atgaacgatt acgccgctat gccgtctgaa gaccgtgagg
      781 tcggcgcatt gtcgctgcct ccacattcga tggaggcgga acaatccgtt ttgggcggtt
      841 tgatgctgga aaatccggct tgggacagga ttgccgatgt ggtttccggt gaagacttct
      901 accgccacga acaccgcctg attttccgat ccattgctaa attaatcaat gagagccgtc
      961 ccgccgatgt gattacggtt caggaagatt tgcagcggaa cgaagaattg gaagcggcag
     1021 gcggattcga atatctgatt acgctggcgc aaaacacccc gtctgccgcc aacatccgcc
     1081 gctacgccga aatcgtgcgc gagcgttcca tcatgcgcca actcgccgaa gtggggacgg
     1141 aaatcgcccg cagcgcatac aatccgcaag gcagggacgc ggggcagctt ttggacgagg
     1201 cggaaaacaa agtattccaa atcgccgaaa gcaccgccaa atccaagcag ggctttttgg
     1261 agatgcccga tttgctgaaa gaagtcgtac agcgcatcga tatgctctac tcgcgcgaca
     1321 atcccgatga agttaccggc gtgccgacgg ggttcatcga cctcgacaaa aaaacctcgg
     1381 gccttcagcc cggcgacctg attattgttg ccggtcgtcc gtctatgggt aagaccgcct
     1441 tttctatcaa tatcgccgaa cacgttgccg tagaaggcaa gctgccggtt gccgtcttct
     1501 caatggagat gggcggggcg caactggtca tgcgtatgct cggctcggtc ggacggctgg
     1561 atcaaagcgt tttgaaaacc ggcaggctcg aagacgaaca ctggggtcgc ctgaacgaag
     1621 cagtcgtcaa actctccgac gcgcccgtgt acatcgacga gaccccgggt ctgaccgcgc
     1681 tcgaactgcg cgcccgtgcc cgccgtctcg cccgtcaatt taacaataag ctgggattaa
     1741 tcgtcatcga ctacctgcaa ctgatggcag gatccggccg ttccgacaac cgagcttcag
     1801 agctgggcga aatttcacgt tcgctcaaag cgttggcgaa agaattgcaa gtccccatca
     1861 tcgccctgtc gcaattgagc cgtaccgtcg aatcgcgtac cgacaaacgc ccgatgatgt
     1921 ccgacctccg cgaatccggt gctatcgagc aagatgccga cctgattatg ttcatgtacc
     1981 gcgacgaata ctacaaccag gactcaccca tgaaaggcct tgccgaatgt atcatcggca
     2041 aacaccgcaa cggtcccgtc ggtaaaatct tcctcacatg gacggggcaa ttcaccaaat
     2101 tcgacaatgc tgcctatatt cccgaggagg caaagataga ggattaaatg gctatataaa
     2161 aatttattag gcgaaatcag gcaaaatcgt ttaaaatcat gcttagagat tgccctaaaa
     2221 aataaaacgc ggtcttgagg catttttgca ttcagcccgc atataattga aaatatagtg
     2281 gattaacaaa aatcaggaca aggcaacgaa gccgcagacc gtacaaatag tacggaaccg
     2341 attcacttgg tgcttgagca ccttagagaa tcgttctctt tgagctaagg cgaggcaacg
     2401 ccgtactggt ttgaatttaa tccactatac attaccagtt aacgttctat tgcttatgtg
     2461 tacacgaaaa caacaaggtt tcacgctaac agagctgctc atcgtgatgg tcattgcagc
     2521 cattatggcg atgatagccc tccccaatat gagccaatgg attgcatccc gccgcattgc
     2581 cagtcacgcg gagcggattg ccaacctttt gcgtttctcc aggggcgaag ccgtccggct
     2641 caatctccct gtctatatct gtcctgttca agttaaaaaa gacggtacgg tcaacaataa
     2701 atgtgactcc ggcaagaagg ggcagggaat gttggctttc ggcgacaaaa acggcaataa
     2761 gggatatgac aatgatacgg cggatgttct cctccgcagt gtggtattga atgatgatat
     2821 caatgataag cggattaatt atgccttcaa ccatatcgct tttggtcaga ctcagccgac
     2881 caccgaccgt gtagtttgga cattcaatca aaacgggacg ttcggttata cgaaagacca
     2941 gcatcttaca aaacaatcca gcttttttta ttccgacggt tatatccaaa tcgtgctgac
     3001 agatgcgaga gcagtttcag atgccgataa gaaattccgt tcggcggtgg ttttgattga
     3061 cagcagcggc agggttgagg tttgtcctag aaacgatagg cgtaccgtat gccaatataa
     3121 atgattgttt tagtcgattt gggaaataaa aaaatgaaga ataatgattg cttccgcctg
     3181 aaaaaccccc agtccggtat ggcgctgata gaagtcttgg tcgctatgct cgttctgacc
     3241 atcggtattt tggcactatt gtctgttcag ttgcggacag tcgcttccgt cagggaggca
     3301 gagacgcaaa ccatcgtcag tcaaatcacg caaaacctga tggagggaat gttgatgaat
     3361 ccgaccattg attcggacag caacaagaaa aactataatc tttacatggg aaaccatcat
     3421 acactatcag ctgtggatgg cgattttgcg gttgatgccg tgaaaagcaa gaaggatttg
     3481 gcaaaagccc agttggacag gttcggttat gaattgaaaa atgccttgca ggatgcggca
     3541 gccatctatt acgccgtctg caaggattcg tcgggtgctg cgccgacatt gtccgccggc
     3601 agtacttttt cttcaaattg cgacaataag gcaaacgggg atactttgat taaagtattg
     3661 tgggtaaatg attcggcagg ggattcggat atcgcccgta cgaatcttga gacgaacggc
     3721 aacaatatcg tatataccta tcaggcaagg gtcggaggtc gggaatgaga cgtaaaatgc
     3781 taaacgtacc aaaaggcagt tatgatggta tgaagggttt taccattatt gaatttttgg
     3841 ttgcgggcat gctcagtatg attgtcctga tggcggtcgg atcgagttac ttcacgtccc
     3901 ggaaattaaa tgatgcggca aacgagcgtc ttgctattca acaggatttg cggaatgcgg
     3961 caacattaat tgtccgcgat gcaagaatgg cggggagctt cggttgtttc aatatgtctg
     4021 agcataccga aaaggatgtt gtttccgatg tgccgcaaaa aaaccgtctt ttttccttaa
     4081 aagggagcag tgcaaataaa cttatcccca acggtacaga taataaactt atccccataa
     4141 cggaatcttt agatatcaat tatcagaatt ttttccaggt tggtagcgca ttgatttttc
     4201 aatacggaat cgatgatgtt aatgcaagcg ccgcgactac cgtcgtcagc agctgtgccg
     4261 caatatcgaa accgggcaag caaatcctta ctttagaaaa tgtaaaaaaa gaattgaaga
     4321 tttcggatca ggataaggag caaaatggca atatagcgcg tcaaaggcat gtggtcaatg
     4381 cctatgcggt cggcaggatt gccggtgagg aaggtttgtt ccgcttccaa ttggatgata
     4441 agggcaagtg gggtaatcct cagttgctcg cgaaaaagat tagatatatg aaagtgcggt
     4501 atatctatgt ttccgactgt cctgaagatg acgatgccgg caaagaggaa acattcagat
     4561 atacggataa attcaacagc gcccaagatg ctgttacgcc cgccggggtg gaggttttat
     4621 tgagtagcgg tactgatacc aagattgccg cttcttcaga caatcatatt tatgcttacc
     4681 gtatcgatgc gacaatacgc gggggaaatg tatgcgcaaa cagaacactt tgacgggaat
     4741 cccgacttct gacggacaga gggggtttgc actgtttatc gtgctgatgg tgatgatcgt
     4801 cgtggctttt ttggttgtaa ctgccgcgca gtcttacaat accgagcagc ggatcagtgc
     4861 caacgaatca gacaggaaat tggctttgtc tttggccgag gcggctttgc gggaaggcga
     4921 acttcaggtt ttggatttgg aatatgatac ggacagtaag gttacattta gcgaaaactg
     4981 tggaaaaggt ctgtgtaccg cagtgaatgt gcggacaaat aatgataatg aagaggcttt
     5041 tgacaatatc gtggtgcaag gcaagcccac cgttgaggcg gtgaagcgtt tttgccctgc
     5101 aaattctacc gacctgtgca ttgacaagaa agggatggaa tataagaaag gcaagggaag
     5161 cgtcagcaaa ccaccgcgct atattatcga atatttgggc gtgaagaacg gagaaaatgt
     5221 ttatcgggtt actgccaagg cttggggtaa gaatgccaat accgtggtcg tccttcaatc
     5281 ttatgtaagc aataatgatg agtaataaaa tggaacaaaa agggtttaca ttgattgaga
     5341 tgatgatagt cgtcgcgata ctcggcatca tcagcgtcat tgccatacct tcttatcaga
     5401 gttatattga aagaggctat cagtcccagc tttatacgga gatggtcggt atcaacaata
     5461 tttccaaaca gtttattttg aaaagtcccc tggacgataa tcagaccatc aagagcaaac
     5521 tggaaatatt tgtctcaggc tataagatga atccgaaaat tgccgaaaaa tataatgttt
     5581 cggtgcattt tgtcaataag gaaaaaccaa gggcatacag cttggtcggc gttccaaaga
     5641 cggggacggg ttatactttg tcggtatgga tgaacagcgt gggcgacgga tacaaatgcc
     5701 gtgatgccgc ttctgcccga gcccatttgg agaccttgtc ctcagatgtc ggctgtgaag
     5761 ccttctctaa tcgtaaaaaa tagggctgtt ttgccgatgc cgtctgaaaa tcaatgttca
     5821 gacggcattt ttatgg
//
LOCUS       DBBZXW010000113         5731 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.113, whole genome shotgun sequence.
ACCESSION   DBBZXW010000113 DBBZXW010000000
VERSION     DBBZXW010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5731
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.113"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="ACJJD2_001849"
     CDS             complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="ACJJD2_001849"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HGG7580327.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1556..1711
                     /locus_tag="ACJJD2_001850"
     CDS             1556..1711
                     /locus_tag="ACJJD2_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580328.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1708..2139
                     /locus_tag="ACJJD2_001851"
     CDS             1708..2139
                     /locus_tag="ACJJD2_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HGG7580329.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2273..>5731
                     /gene="app"
                     /locus_tag="ACJJD2_001852"
     CDS             2273..>5731
                     /gene="app"
                     /locus_tag="ACJJD2_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HGG7580330.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYKAGTKGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGWKYTDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKNWFYDEIFTGDTHSVFYEPHQNGKYTFHD
                     NNNGTGKINAKHEHNSLPNRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGTVILDQQADDKGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNRHSLSFHRIQNTDEGAMIVNHNATTTST
                     VTITGNESITQPSGKNINRLNYSKEIAYNGWFGEKDATKTNGRLNLVYQPAAEDRTLL
                     LSGGTNLNGNITQTNGKLFFSGRPTPHAYNHLNNHWSQKEGIPHGEIVWDNDWINRTF
                     KAENFHIQGGQAVISRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCV
                     ENTITDDKVIASLTNTDISGNVDLADHAHLNLTGLATLNGNLTAGGDTHYEVTHNATQ
                     RGNLSLVGNAQATFNQATLNGNTSASGNASFNLSNNAVQNGSLTLSGNAKANVSHSAL
                     NGNVSLADKAVFHFENSRLTGQISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITL
                     NSAYRHDAAGAQTGSVSDTPRRRSRRSRRSRRSLLSVTPPTSAESRFNTLTVNGKLNG
                     QGTFRFMSELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSE
                     NLNFTLQNEHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAGKDNAQS
                     LDALIAAGRDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQREAET
                     RPATTAF"
BASE COUNT         1577 a         1599 c         1396 g         1159 t
ORIGIN      
        1 aaccaaacgg atcggattcc cgtttttatg ggataacgga atgttcagcc ggacaccgcc
       61 acgatgcttt cgatccgttt attttccgat acaaaacctc gaaaaaatca cgccgagcag
      121 gtcgtccgcc gtaaactcgc ccgtgatttc gccgcatgcg acctgcgcca agcgcaagtg
      181 ttcggcaaac agctcgattt gatggttgcc gcacaatgcc gccagcgaca attcttcctg
      241 cgctgctttg agtgcgttga cgtgccgcgt ccgcgccaaa aacagccctt cgccctcgcc
      301 ctgccatccg gcctcgcgca acaacgtccg tttcagcgcg tccaagccgt cgccggtttt
      361 cgccgacagc gcgatgacgg tttccgcgcc cgtaccgaac ccgcctgccg cgtgtgcgtg
      421 caaatcggat ttgctgtgga tttcgatgcg tttcaactcc ggcggcaacg cgtccaaaat
      481 cgcccgtgtc ttgtcgttca cgccttcgcg cggatcgacc aacaccagcg cgacatcggc
      541 ttcggatacg gctttgcggc tgcgttcgat gccgatgcgt tcgaccacgt cgtccgtctc
      601 gcgcaaacct gccgtatcga caatatgcac cggaacgccg tcaatcagga tacgttccct
      661 gaccgcgtcg cgcgtcgttc cggcaatatc ggtaacaatc gccacttcgt cgcccgccag
      721 cgcgttcaac aggctggatt tgccgacatt cggcgcgccg accaatacga cattcagacc
      781 ttcgcgcaaa atcgcgccct gctgcgcgtt ggcaagcaca tcatccacgg cgcggcgcaa
      841 gccgtccagt ttgccgcgtg cgtctgccgc ttcgagaaaa tcaatgtctt cctcgggaaa
      901 atctaacgtc gcttcgacca gcatccgcaa ggtaatcaag tcttcgacca gaccgtgtat
      961 ccgccgcgaa aaatcgcctt tgagcgagcg caacgccaga cgcgccgccg aacggctgga
     1021 tgcgtcaatc aaatccgcca cgccttccgc ctgtgccaag tccagtttgt cgtttaaaaa
     1081 cgcacgcttc gtaaactcgc ccggttcggc aaggcgcgcg cccaattcca aacagcggtt
     1141 cagcagcata tccatcacta ccggcccgcc gtgtccctga agctcgataa catcttcgcc
     1201 cgtaaaactt gccggtgcgg caaaaaaaag caaaagcccg ctgtcgattg cctgaccgtc
     1261 cgcgtccgta aaatcagcat aggttgccac gcgcggcttg ggcgttttcc cacacaaagc
     1321 ctctgccatc ggcagcaggt ttttccccga tatgcgtatc acgcccacgc cgccgcgccc
     1381 gggtgcggta gcgactgccg caatcgttgg aacgttatcc gacataaaac ccccgaaaat
     1441 tcaaaacagc cgcgattata gcaaatgccg tctgaagtcc gacggtttgg ctttcagacg
     1501 gcataaaacc gcaaaaatgc ttgataaatc cgtccgcctg acctaatata accatatgga
     1561 aaaacgaaac acatacgcct tcctgctcgg tataggctcg ctgctgggtc tgttccatcc
     1621 cgcaaaaacc gccatccgcc ccaatcccgc cgacgatctc aaaaacatcg gcggcgattt
     1681 tcaacgcgcc atagagaaag cgcgcaaatg accgaaaacg cacaggacaa ggcgcggcag
     1741 gctgtcgaaa ccgtcgtcaa atccccggag cttgtcgagc aaatcctgtc cgacgagtac
     1801 gtgcaaataa tgatagcccg gcgtttccat tcgggaccgt tgccgccgcc gtccgacttg
     1861 gcgcaataca acgacattat cagcaacggg gcagaccgca ttatggcaat ggcggaaaaa
     1921 gaacaagccg tccggcacga aaccatacgg caagaccaaa ccttcaacag gcgcgggcaa
     1981 ctgtacggct tcatcagcgt catcctgata ctgctttttg ccgtcttcct cgtatggagc
     2041 ggctaccccg caaccgccgc ctcccttgcc ggcggcacag tggttgcctt ggcgggtgct
     2101 ttcgtgattg gaagaagccg agaccaaggc aaaaattaat gacaaatcct agggcgtgct
     2161 tcatatccgc ccgaacgccg aaccgcacat ataggcacat cccgcgcgcc gcccggaagc
     2221 ggaagccgcg ccctcccaaa caaacccgaa tcccgtcaga taaggaaaaa taatgaaaac
     2281 aaccgacaaa cggacaaccg aaacacaccg caaagccccg aaaaccggcc gcatccgctt
     2341 ctcgcctgct tacttagcca tatgcctgtc gttcggcatt cttccccaag cttgggcggg
     2401 acacacttat ttcggcatca actaccaata ctatcgcgac tttgccgaaa ataaaggcaa
     2461 gtttgcagtc ggggcgaaag atattgaggt ttacaacaaa aaaggggagt tggtcggcaa
     2521 atcaatgaca aaagccccga tgattgattt ttctgtggtg tcgcgtaacg gcgtggcggc
     2581 attggtgggc gatcaatata ttgtgagcgt ggcacataac ggcggttata acaatgttga
     2641 ttttggtgcg gagggaagca atcccgatca gcaccgtttt tcttaccaaa ttgtgaaaag
     2701 aaataattat aaagcaggga ctaaaggcca tccttatggc ggcgattatc atatgccgcg
     2761 tttgcataaa tttgtcacag atgcagaacc tgttgagatg accagttata tggatgggtg
     2821 gaaatatacc gatcaaaata attatcctga ccgtgttcga atcggagcag gcagacaata
     2881 ttggcggtct gatgaagatg aacccaataa ccgcgaaagt tcatatcata ttgcaagtgc
     2941 gtattcttgg ctcgttggtg gcaatacctt tgcacaaaat ggatcaggtg gtggcacagt
     3001 caacttaggt agtgaaaaaa ttaaacatag cccatatggt tttttaccaa caggaggctc
     3061 atttggcgac agtggctcac caatgtttat ctatgatgcc caaaagcaaa agtggttaat
     3121 taatggggta ttgcaaacag gcaaccccta tataggaaaa agcaatggct tccagctagt
     3181 gcgtaaaaat tggttttatg acgaaatttt taccggagat acccattcag tattctacga
     3241 accacatcaa aatgggaaat acacttttca cgacaataat aatggcacag gaaaaatcaa
     3301 tgccaaacat gaacacaatt ctctgcctaa tagattaaaa acacgaaccg ttcaattgtt
     3361 taatgtttct ttatccgaga cagcaagaga acctgtttat catgctgcag gtggtgtcaa
     3421 cagttatcga cccagactga ataatggaga aaatatttcc tttattgacg aagggaaagg
     3481 cgaattgata cttaccagta acatcaacca aggtgctgga ggattatatt tccaaggaga
     3541 ttttacggtc tcgcctgaaa acaacgaaac gtggcaaggt gcgggcgttc atatcagtga
     3601 agacagtacc gttacttgga aagtaaacgg cgtggcaaac gaccgcctgt ccaaaatcgg
     3661 caaaggcacg ctgcacgttc aagccaaagg ggaaaaccaa ggctcgatca gcgtgggcga
     3721 cggtacagtc attttggatc agcaggcaga cgataaaggc aaaaaacaag cctttagtga
     3781 aatcggcttg gtcagcggca ggggtacggt gcaactgaat gccgataatc agttcaaccc
     3841 cgacaaactc tatttcggct ttcgcggcgg acgtttggat ttaaacaggc attcgctttc
     3901 gttccaccgt attcaaaata ccgatgaagg ggcgatgatt gtcaatcata atgccacaac
     3961 aacatccacc gttaccatta cagggaatga aagtattaca caaccgagtg gtaagaatat
     4021 caatagactt aattacagca aagaaattgc ctacaacggt tggtttggcg agaaagatgc
     4081 gaccaaaacg aatgggcggc tcaaccttgt ttaccagccc gccgcagaag accgcaccct
     4141 gctgctttcc ggcggaacaa atttaaacgg taacatcacg caaacaaacg gcaaactgtt
     4201 tttcagcggc agaccaacac cgcacgccta caatcattta aacaaccatt ggtcgcaaaa
     4261 agagggcatt ccgcacggag aaatcgtgtg ggacaacgac tggattaacc gcacgtttaa
     4321 agcggaaaat ttccatattc agggcgggca ggcggtgatt tcccgcaatg ttgccaaagt
     4381 ggaaggcgat tggcatttga gcaatcacgc ccaagcagtt ttcggtgtcg caccgcatca
     4441 aagccacaca atctgtacac gttcggactg gacgggtctg acaaattgtg tcgaaaacac
     4501 cattaccgac gataaagtga ttgcttcatt gaccaatacc gacatcagcg gcaatgtcga
     4561 tcttgccgat cacgctcatt taaatctcac agggcttgcc acgctcaacg gcaatctgac
     4621 cgcaggcgga gacacgcact atgaggttac gcacaacgcc acccaaagag gcaaccttag
     4681 cctcgtgggc aatgcccaag caacatttaa tcaagccaca ttaaacggaa acacatcggc
     4741 ttcgggcaat gcttcattta atctaagcaa caacgccgta caaaacggca gtctgacgct
     4801 ttccggcaac gctaaggcaa acgtaagcca ttccgcactc aacggcaatg tctccctagc
     4861 cgataaggca gtattccatt ttgaaaacag ccgccttacc ggacaaatca gcggcggcaa
     4921 ggatacggca ttacacttaa aagacagcga atggacgctg ccgtcaggca cggaattagg
     4981 caatttaaac cttgacaacg ccaccattac actcaattcc gcctatcgcc acgatgctgc
     5041 aggcgcgcaa accggcagtg tgtcagacac gccgcgccgc cgttcgcgcc gttcgcgccg
     5101 ttcgcgccgt tccctattat ccgttacacc gccaacttcg gcagaatccc gtttcaacac
     5161 gctgacggta aacggcaaat tgaacggtca gggaacattc cgctttatgt cggaactctt
     5221 cggctaccgc agcgacaaat tgaagctggc ggaaagttcc gaaggcactt acaccttggc
     5281 ggtcaacaat accggcaacg aacctgcaag cctcgaacaa ttgacggtag tggaaggaaa
     5341 agacaacaaa ccgctgtccg aaaaccttaa tttcaccctg caaaacgaac acgtcgatgc
     5401 cggcgcgtgg cgttaccaac tcatccgcaa agacggcgag ttccgcctgc ataatccggt
     5461 caaagaacaa gagctttccg acaaactcgg caaggcagaa gccaaaaaac aggcgggaaa
     5521 agacaacgcg caaagccttg acgcgctgat tgcggccggg cgcgatgccg tcgaaaagac
     5581 agaaagcgtt gccgaaccgg cccggcaggc aggcggggaa aatgtcggca ttatgcaggc
     5641 ggaggaagag aaaaaacggg tgcaggcgga taaagacagc gccttggcga aacagcgcga
     5701 agcggaaacc cggccggcta ccaccgcctt c
//
LOCUS       DBBZXW010000114         5656 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.114, whole genome shotgun sequence.
ACCESSION   DBBZXW010000114 DBBZXW010000000
VERSION     DBBZXW010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5656
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.114"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            98..814
                     /locus_tag="ACJJD2_001853"
     CDS             98..814
                     /locus_tag="ACJJD2_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HGG7580331.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            963..1865
                     /locus_tag="ACJJD2_001854"
     CDS             963..1865
                     /locus_tag="ACJJD2_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HGG7580332.1"
                     /translation="MDSLMTLISVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGTNLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFASGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGLSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            1908..2681
                     /locus_tag="ACJJD2_001855"
     CDS             1908..2681
                     /locus_tag="ACJJD2_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HGG7580333.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EDAGSLKRHHGGASSGGNLPEGLPASRQIQCQNEKNAIARLIAEHIPDESSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2793..4481
                     /locus_tag="ACJJD2_001856"
     CDS             2793..4481
                     /locus_tag="ACJJD2_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HGG7580334.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4574..5530
                     /gene="gshB"
                     /locus_tag="ACJJD2_001857"
     CDS             4574..5530
                     /gene="gshB"
                     /locus_tag="ACJJD2_001857"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HGG7580335.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1316 a         1537 c         1562 g         1241 t
ORIGIN      
        1 aatttgtgca atgctttaat tcctctgaca cgatttgaaa cacagccgcc ttaaaatatc
       61 ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg aactttgaaa acgacgacat
      121 tatccatgcg ccgactacgt cttccctgat tctcgaagag cggcacgatt ctgagctgtt
      181 ccgtgtttac gccctgattt tggacggcat taccgatcag gtgctgctgc ccggcaaaaa
      241 gctgaccgaa tccgaacttt gccgtcagat ggtgtgttcg cgcaacaccg tccgcggcgc
      301 gctgtcgctt ttggcgcacg acaagattgt cgatttgcaa cccaacaggg gcgcgttcgt
      361 ccacgttccc gatttgaaag aaatgcagga tgtgttcaat gcgcgcatcg aaatggagac
      421 gatgattttg aatatcctcg cagatttgcc ggatttggaa acgcgcctca agccgcttta
      481 tgcgatgata cggcgcgaag aagaggcctc cggcaggggc gaccgcgttg gctggaaccg
      541 cctgtccaat gccttccacg tcgaactggc gcgcctggtg ggcaacgatg tgctgttcga
      601 cattatgaac acgctgtgcg cgcggtcttc cctgattgtc gccgtggcgg gcgtgcatcg
      661 cgaggaaaaa cacgccatca atacgcatac gcattcagaa caccgcgaaa tcctcgacct
      721 gctgctggcg ggcaggcgca accgcgtggt caaaatcctg cgccgccatt tgggcaactg
      781 tatggagcgt ttggaaaaga ctttggaaga ttgaatgccg gagcggataa gccgcctgaa
      841 ccttcaggcg gttttttaat ggcgaacctg atgccgtctg aaatatggat gcgggtatct
      901 gcaattttca gacggcaatt tttaaaccgc acatatcatg cggcaataaa ggaggccagg
      961 agatggacag cctgatgaca ttgatttcgg ttttgatacc gatgtttgcc ggatttttta
     1021 tccgtgtgcc caagccttac ctgcccgctt tggataaggt gctatcggtt ttggtgtatg
     1081 ccgtgctgct gctgatcggc gtatcgttgt cgcgcgtgga ggatttgggt tcgcggttgg
     1141 acgatatggc gttgacggtt ctgtggctgt ttgtttgtac ggtcgggacg aacctgcttg
     1201 ctttggcagt gttgggaaag ttattcccgt ggcggataaa ggggaaaggg aagggcgttt
     1261 cggtcggtgt gtcgggcagt gtggggcagc tcggatgcgt gctgctcgga tttgcatccg
     1321 gcaaactgat gcgcgatatt tggatgccgt ctgaaagcgc gggcatgtat tgtctgatgc
     1381 tgctggtgtt cctcatcggc gtacagctca aaagcagcgg cctatcgttg cggcaggttt
     1441 tggtcaaccg caggggtatt cggttgtcgg tctggtttat gctttcatct ctttcgggcg
     1501 ggctgctgtt tgccgcatcg gcagacggtg tgtcgtggac gaaaggtttg gcgatggctt
     1561 ccggcttcgg ttggtattcc ctctcgggtt tggtcatgac cgaggcttac ggcgcggtat
     1621 ggggcagcat catgctgctg aacgatttgg cacgagagct gtttgcactg gcatttatcc
     1681 cgctgctgat gaagcgtttt ccggatgcgg cggtgggggt tggcggtgcg accagtatgg
     1741 attttacatt gcccgtgatt cagggtgcgg gcggtttgga agtcgtgccg gtagcggtca
     1801 gcttcggcgt ggtggtcaat attgccgccc cgtttctgat ggtggtgttt tccacgctgg
     1861 gctgaacgcg gtaaaatcgg catcccgatg caaggaggca gaaaacgatg aaaccgaaaa
     1921 tccaaaggca cggagagatt ttaagccttg tccgccggca tcagtttatg tcggtggacg
     1981 agcttgccgc cgcattggac gttaccccgc agacgatacg ccgcgacatc cgcgaattgg
     2041 aggatgctgg cagcctgaaa cgccaccacg gcggcgcatc ctcgggcgga aacttgccgg
     2101 aggggctgcc tgccagccgc caaattcaat gtcaaaacga aaaaaacgcc attgcccggc
     2161 tgattgcgga acatattccc gacgagtcat cgctgtttgt cagtatcggc acgacgatgg
     2221 aagccgtggc atcggagctg gtgagacggc gcggcagcct gcggattatt accaacaata
     2281 tccacgtcgc ctccatcgtt tcggcgcgga cggattacac ggtcatcatc acttccggag
     2341 tcgtccgccc tttggacggc ggcattaccg gcgtggcaac cgtcgatttt atcaaccagt
     2401 tcaaagtcga ttatgccgtg atgagtacgc acggcgtgga aagcgacggt tcgcttttgg
     2461 acgacgacta caaagaagtc agcgtgatgc aggcgatgat tgccaacgcg cgcgtccgct
     2521 tcctcggcgt ggaccacagt aaattccgca gcaacgcgct ggtcaggctc ggcgacatta
     2581 cggcgtttga caaagtattt accgaccggc tgcccgatac cgcgatgcag aagatgctga
     2641 aagaggcggg ggtggaatgc ctgattgccg atgccgtctg aacgctatgt caaagcgcgc
     2701 aagtcgggta caataaacac atcatcaaac cgcttcagac ggcataagga accgccccaa
     2761 tgccgtctga agccatctgt tcaaagaaaa ctatgctcaa taaagaccaa tttgcggaca
     2821 accattttat ccgcaccttc atcgaagaag acctcaaaag cggcaaacac gaaaccatcc
     2881 aaacccgttt tccgccggag cccaacggct acctgcacat cggacacgcc aaatccatct
     2941 gcctgaactt cggtttggcg tatatttacg acggcttgtg caacctgcgt tttgacgata
     3001 ccaaccccga aaaagaaaac gacgaatacg tcaacgccat caaagaagac gttgagtggc
     3061 tcggtttcca ttgggcgggc gagccgcgtt tcgcttccaa ctatttcgac cagctttatg
     3121 actacgccgt cggtttggtt aaagacggca aagcgtatgt cgatgatttg acgccagaag
     3181 aaatgcgcga ataccgcggt acgctgaccg aagcaggcaa aaacagccct tatcgcgacc
     3241 gcagtatcga agaaaacctc gacctgttca cgcgcatgaa aaacggtgag ttccccgacg
     3301 gcagcaaaac cctgcgcctg aaaatcgaca tggcatccgg caacatcaat atgcgcgatc
     3361 cggtcatcta ccgcatccgc cgcgcccatc accacaacac cggcgacaaa tggtgcatct
     3421 atccgatgta cgactacacg cattgtattt ccgatgccat cgaaggcatc acgcattcct
     3481 tgtgtacgct cgaatttgaa gcccatcgtc cgctgtatga ctgggtgttg gacaacatcc
     3541 ccgcgccgca cgccacacgt ccgcgccaat acgagttttc acgcttggag cttttgtaca
     3601 ccattacctc caaacggaaa ttgaatcagt tggttgtgga aaaacacgtt tccggctggg
     3661 acgatccgcg tatgccgacc atttccggta tgcgccgacg cggctacacg cccgaagggc
     3721 tgcgcctgtt tgccaaacgc gccggtattt ccaaatctga aaacatcgtc gatatgagcg
     3781 tgttggaagg cgcgattcgc gaagagttgg aaaattccgc cccacgcctg atggcggtgt
     3841 tgaacccgct caaagtgacc ctgaccaact ttgaaaccgg cagaacccaa agccgccgtg
     3901 ccgcgttcca tccgaaccac gaggaaatgg gcgagcgcga agtacctatt tcacaaacca
     3961 tctatattga agccgacgac tttgccgaaa atccgcccaa aggcttcaaa cgcctgattc
     4021 ccggcggcga agtacgcttg cgccacggct atgtcatcaa gtgcgatgaa gtcgtcaaag
     4081 acgaagcagg caatgtggtt gaactcaaat gcagcatcga ccacgacacc ttgggcaaaa
     4141 atccagaagg ccgtaaagtt aaaggcgtga ttcattgggt ttccgccgaa cacgccgccg
     4201 aaatcaaagt ccgtctgtac gaccgcctct ttaccgtcga gcgtcccgat gccgtgcgcg
     4261 gcgaagacgg cgaatacctg ccgttcaccg atttcctcaa tccggaatcc gtcaaggaaa
     4321 tcaccgccta cgccgaacct gccgccaaag atttgccggc agaaagccgt tggcagttcg
     4381 agcgtatcgg ctacttcgta accgaccgta aagaccacgg caaagacacg ccggtgttta
     4441 accgcacggt cacgctgaaa gattcttggc agcctaagta aaaccccatc cttgccgtct
     4501 gaatattgtt cggacggcat ttcccctttg cccgcgaaat gcggcacatt cggcacaccg
     4561 gaaaggaaat atgatgaaag tcctctttat cgccgacccg atggcaagtt tcaaaaccta
     4621 caaagacacc acctacgcca tgatgcgcga gatggcaaaa cgcggttggc ggctgtttca
     4681 taccttgagc ggggaattgt cggttaaaaa cggtctggtg gttgctgatg cgtctgcttt
     4741 tgagtttctc ggcgcacaag acgaccacga caaaaactgg tttgccgccg ccgacaaagt
     4801 tcagacggca ttgaaagcat ttgatgccgt gattatgcgt accgatccgc cgttcgatat
     4861 gcaatacctc tacgccaccc aattactgac gctggcggag cagcagggcg cgaaggtctt
     4921 taacagcgga caggcgatgc gtgatttcaa tgaaaaactg gcgattttga acttcagccg
     4981 ctttaccgcg cccacgctgg taacgacccg ttccgccgat gtccgcgcat ttttgaaaga
     5041 acacggcgac atcatcatta aaccgctcga cggcatgggc ggtatgggca tcttccgcct
     5101 gaccgaaaaa gaccccaaca tcggcagcat cctcgaaacc ctgatgcagc ttgattcccg
     5161 caccattatg gcgcaacgct acattcccga aatcgtacac ggtgacaaac gcatcctgat
     5221 tatcggcggc gaagtcgtcc cctatgcttt ggcgcgtatc ccgcaaaacg gcgaaacacg
     5281 cggcaacctt gcggcaggcg ggcgcggcgt ggcgcaggaa ttgggcggac gcgaccgcga
     5341 aattgccgaa acgctcgccc ccgaactcaa acggcgcggc atcctgctgg ccggtttgga
     5401 cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc ccgaccggat tccaagaaat
     5461 tatgaaacaa aaaggtttcg acgtggcggc aatgtttgcc gatgccgttg ccgcgtggtc
     5521 ggtacgttaa accgatgccg tttgaaaggc ttttgcttca caaccgtttg gtttgatcgg
     5581 gcaggcaggg ttttccctca gccggcagag atacgcttaa tgccgtacgg acacaccgcc
     5641 gccccgtttt cagacg
//
LOCUS       DBBZXW010000115         5515 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.115, whole genome shotgun sequence.
ACCESSION   DBBZXW010000115 DBBZXW010000000
VERSION     DBBZXW010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5515
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.115"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..86)
                     /locus_tag="ACJJD2_001858"
     CDS             complement(<1..86)
                     /locus_tag="ACJJD2_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HGG7580336.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPV"
     gene            complement(485..760)
                     /locus_tag="ACJJD2_001859"
     CDS             complement(485..760)
                     /locus_tag="ACJJD2_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7580337.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(757..2040)
                     /locus_tag="ACJJD2_001860"
     CDS             complement(757..2040)
                     /locus_tag="ACJJD2_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7580338.1"
                     /translation="MTVSKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRVPILGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRIAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPSVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWIFGAVQAVTVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(2191..3609)
                     /gene="glnA"
                     /locus_tag="ACJJD2_001861"
     CDS             complement(2191..3609)
                     /gene="glnA"
                     /locus_tag="ACJJD2_001861"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HGG7580339.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWSSGLHLDGQNTGHRPTVKGGYAPVAPIDCGQDLRSAMVNILEELGIKVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            3693..3887
                     /locus_tag="ACJJD2_001862"
     CDS             3693..3887
                     /locus_tag="ACJJD2_001862"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580340.1"
                     /translation="MPSETRPASNFKLENIVSDGKIVNNMDKIAYHVRISPQLIQGKT
                     VPPDNRFRRHRFHLYAAVIK"
     gene            3913..4722
                     /gene="aroE"
                     /locus_tag="ACJJD2_001863"
     CDS             3913..4722
                     /gene="aroE"
                     /locus_tag="ACJJD2_001863"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HGG7580341.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHRQFALQEGVDIEYGRICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLILLKNGKLRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTHAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVNPEIFRDCRLAYDMVYGEA
                     AKPFLDFARQSGAKQTADGLGMLVGQAAASYALWRGFTPNIRPVIEYMKAM"
     gene            4724..5425
                     /gene="mtgA"
                     /locus_tag="ACJJD2_001864"
     CDS             4724..5425
                     /gene="mtgA"
                     /locus_tag="ACJJD2_001864"
                     /EC_number="2.4.99.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HGG7580342.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGIFGAEAASRYFYQIPAAKLSKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
BASE COUNT         1372 a         1473 c         1406 g         1264 t
ORIGIN      
        1 ttaacaggtt cacatgaggt catagtaaaa acactcccaa taaacaaaat aaaaagttga
       61 taaatagtag tagcatatgg tctcataatt tcaagcctag aaattagtta aagaatatat
      121 tatggtagat actaactctt taagttgaca tattgtgcga tatcgagggc tgtaccgtat
      181 tttcccatcg tattttccca tcgtattttc ccgttcttta tatgagcggc aggcatcctc
      241 ataaaagaag ggataccgat aaggaaaaat accccagcat aaaaaatata ctgattaatc
      301 aatacaaatc caacaaacag ttcatcgtat tcttttctgt tggcgtataa aaaatactga
      361 tatatgcctt cactttcata gggcgacgct ttatgtaccg tcctgtgtgt tgaaacgtcg
      421 gttttcctta ccgcctgccc cgcttttccc tgattgctgc caactgccgt ccgaacttga
      481 accgtcaggt ttcagacggc attttttctg cctgctccca caattgccgt ttttgtgcgg
      541 cggtcagttt tttgacggcg atttcctgcc tgagtgccgt tcctttatcc atcccgcctg
      601 caacgatacg catcgccacc ggtttgaata cgcgggtata tttcgcgcct ttaccggttg
      661 tgtgggcggc aagccgctgt tgcggattcg ggctgatgcc gcaatagaac gcgctgtttt
      721 cacacaatat caggtaaacg ctccagtttg acgcgttcat ctgcctgcat cctgagtttt
      781 ctccccgttc caaggcgcaa ctttcagcag cagcagcata cccggcaggg caagtatgaa
      841 acacagctgg aaaaacggta catacccgag ccattcaatc agataaccgg caaaggaatt
      901 gatgaccgta cggggaacag cggacaggct ggtaaacagt gcaagctgcg ttgcggtaaa
      961 tgcgggattg gtctcgcgcg ccatatacga tacaaacgcc gccgtcccca aacccacgcc
     1021 gactgcctct gcgccgataa ctgccgccag catcagcctc tcgcctgtgc cgaccgtgtc
     1081 gaaatgtccg aaccctgcca gccatacaaa ccccaaaacg gttacagcct gcaccgcgcc
     1141 aaatatccac aaggctttgt ttacgccgat tttcagcatc cacacgccgc ccaagatacc
     1201 tgccgccact gccggccaca gtcctgcgtt tttggcaatc aaaccgatgt cggtcttgct
     1261 gaaacccata tccagataaa acggcgttgc caacgcggtt gccatactgt cgccgagttt
     1321 gtaaaggaag ataaacagca gcacgcatac agccgaagcg atgcccttgc gtgtaaaaaa
     1381 ttctttaaac ggctctacca ctgtctgctt caacgtttta ggaacggaag gcggcaacac
     1441 gggttcgcgc gcgagaaaca gcgtcatcag aaggccgggc agcataaata atgaagtgat
     1501 aacaaatact tctgaccacg gcatcctgtc tgccaacacc aaactcaatg aaccgggaat
     1561 cagggcggca atccggtagg cgttcacatg gactgagttg cccaaaccca attcctcgtc
     1621 cgacaaaatc tcgcgcctga acgcatccaa tacaatatcc tgactggcgg aaaaaaaagc
     1681 gacaagcacc gacaagccgg caatcaacgg cagatgattc cgggggttta aaaaggcata
     1741 ggccgccaaa gccgccagca accctgcctg cgtcaacagc atccacccgc gccgccggcc
     1801 caaaatggga accctgaccg cgtccatcag cggagaccac aaaaatttcc aagtaaacgg
     1861 cagaccgatc agcgccatca gcccgatgct cttcaaatcc acctgctcgc tgcgcaacca
     1921 tgccggaatc aggttaatca gaaagtacag cggcagcccc gaggtaaacc ccgtaaaaat
     1981 acagacaagc atatttcggg aaaagatttg cccgataaaa cctgatttcg atacagtcat
     2041 ggttcaaaca gccaagaaat aaaagcctat tgtagcaaat atcgcccaac cgctgaaaaa
     2101 caccgaccct gctccgccgt tttgccgttc aaatgcaaaa tgccgtctga aactttgttc
     2161 agacgacatt tctactgaaa cctgagagtt ttacaggctg taatacattt caaattccag
     2221 cggatgcggt gccatgcgga tgcggcggac atcttcctct ttaaaggcga tgtagctgtc
     2281 gatccagtct ttgctgaata cgccgccgcg caggaggaat tcgtggtcgg ctttgagggc
     2341 ggcgagggct tcttccaaag aggcgcagac ggtcggcacc aatgcatctt cttccggcgg
     2401 cagatcgtac aggtttttat cggcagggtc gcccggatga attttgtttt gaataccgtc
     2461 caaaccggcc atcaacaaag cggcgaacgc caagtatggg ttggcggtcg gatcggggaa
     2521 acgcgcttcg atgcggcgcg ccttgctgct gttcacggac ggaatgcgga tggaagcgga
     2581 acggtttttg gcggaataag ccagtttggt cggcgcttca aagtgcggca caaggcgttt
     2641 gtaggagttg gtggacggat tggtaatcgc gttcagggct ttggcgtgtt tgatgatgcc
     2701 gccgatgtaa taaagggcgg tgtcgctcaa accggcatag ccgtcgccgg cgaacaggtt
     2761 ttgaccgtct ttccagatgg attggtgaac gtgcataccg ctgccgttgt cgcccataat
     2821 cggtttgggc atgaaggtgg cggttttgcc gaagttgtgg gcaacgtttt gaatcacata
     2881 tttcatgtct tgggtttggt cggcgcgttt aaccaaagtg gcgaagcgcg tgccgatttc
     2941 catttggctg ccggtaccga cttcgctgtg gtggacttcg actttgatgc cgagttcttc
     3001 caaaatgttc accatggcgg agcgcaaatc ttgaccgcag tcaatcgggg caacgggcgc
     3061 gtaaccgcct ttgacggtcg gacggtggcc agtattttga ccgtccaaat gcaagccgct
     3121 tgaccatgcg ccgctttcgg aagtgatttc gtaacgggtt ttgtgcatgt cggtttcaaa
     3181 ttctacgccg tcaaaaacga agaattcagg ctcggggccg aaataggcgg tgtcgccgat
     3241 gccggaagat ttcaaatagg cttcggcgcg gcgggcgatg gagcgcgggt cgcggtcgta
     3301 accctgaccg tcggcagggt cgatgacgtc gcaggtaatg acgacggtaa catcatcata
     3361 aaaaggatcg acgaaggctg tagacgcatc gggacgcagc tgcatatcgg aagcctgaat
     3421 gcctttccag ccgccgatag acgaaccgtc aaacgcctga ccgttttcga accactcttc
     3481 ggggtcttcc aacacgatgc gcgcaggcac ggtaaagtgg tgctgcttgc ctttggtatc
     3541 ggtaaagcgc aaatcgacaa agcgggcttc gctttcttca atcaatttta cggcgttttt
     3601 aatagacatt tttcagctcc tggaaaaggg aaatagcaaa atatgcggaa cgcggcggct
     3661 tgacgcaaag tcggcatgat tctaccacgt ccatgccgtc tgaaactcgc cctgcgtcaa
     3721 atttcaagct ggaaaatata gtttcagacg gcaagattgt caacaatatg gataaaattg
     3781 catatcatgt ccggatttct ccccagctta tacagggaaa aaccgtaccg cctgacaacc
     3841 gtttcagacg gcatcgtttc catctgtacg ccgccgttat aaaatagcct tcccgtcttt
     3901 tggaacacga ccatgaccgc cctcccccgt tactccgttt tcggcaaccc cgttgcacac
     3961 agtaaatctc cgcagattca tcggcaattt gcccttcagg aaggcgttga catcgaatac
     4021 ggacgcattt gcgccgacat cggcggtttc gctcaggcgg tttcgacatt ttttgaaaca
     4081 ggcggttgcg gggcaaacgt taccgtaccg ttcaaacagg aagcgtttca tctggcggac
     4141 gaacattccg accgcgcttt ggcagcaggt gcggtcaata cgctgattct gttgaaaaac
     4201 ggcaagctgc gcggcgacaa tactgacggt atcggtttgg ccaacgacat cacgcaggtt
     4261 aaaaacattg ccatcgaggg caaaactatt ttacttttgg gcgcgggcgg tgcggtgcgc
     4321 ggcgtgattc ctgttttgaa agaacaccgt cctgcccgta tcgtcattgc caaccgtacc
     4381 catgccaaag ccgaggaatt ggcgcagctt ttcggcattg aagccgtccc gatggcggat
     4441 gtgaacggcg gttttgatat catcatcaac ggcacatccg gcggtttgag cggtcagctt
     4501 ccggccgtca atcctgaaat tttccgcgac tgccgccttg cctacgatat ggtgtacggc
     4561 gaagcggcaa aaccgttttt ggattttgcc cggcaatcgg gcgcgaaaca aaccgccgac
     4621 ggactgggta tgctggtcgg tcaggcggcg gcttcctacg ccctctggcg cggatttacg
     4681 cccaatatcc gccctgttat cgaatacatg aaagccatgt aatatgttcc gcatcgtcaa
     4741 atggctgatt gccctgcccg tcggcatctt tatctttttc aatgcctatg tgtacggcaa
     4801 catcatcacc taccgcgccg tcgcgccgca tcggactgcc tttatgtcga tgcggatgaa
     4861 gcagtttgaa caggaaggtc gcgatgtcgc actggattac cgctgggtac cctacaaccg
     4921 catctcggtc aacctgaaaa aagccctgat tgcttccgaa gatgcccgtt tcgccggaca
     4981 cggcggcttc gattggggcg gcattcaaaa cgccatcagg cgcaaccgga acagcggcaa
     5041 agtgaaggcg ggcggttcga ccatcagcca gcagcttgcc aaaaacctgt ttttaaacga
     5101 aagccgcagc tatatccgca aaggcgaaga agcggcgatt accgcgatga tggaagctgt
     5161 taccgacaaa gacaggattt ttgaactgta tttaaactca atcgagtggc actacggtat
     5221 tttcggcgcg gaagccgcgt cccggtattt ttatcaaata cccgccgcca aactgagcaa
     5281 acagcaggcg gcgaaactga cggcgcgcgt ccccgccccg ctctactacg ccgaccatcc
     5341 gaaaagcaaa cggctgcgca acaaaaccaa tatcgtgctc agacgcatgg gttcggcaga
     5401 attgcctgaa agcgacacgg actgattgtt tcagatatgg aaatgccgtc tgaactgcgg
     5461 ttcggacggc atatgttttc tggtttttat agtggattaa caaaaatcag gacaa
//
LOCUS       DBBZXW010000116         5480 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.116, whole genome shotgun sequence.
ACCESSION   DBBZXW010000116 DBBZXW010000000
VERSION     DBBZXW010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5480
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.116"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..263)
                     /locus_tag="ACJJD2_001865"
     CDS             complement(<1..263)
                     /locus_tag="ACJJD2_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7580343.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGT"
     gene            371..769
                     /locus_tag="ACJJD2_001866"
     CDS             371..769
                     /locus_tag="ACJJD2_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HGG7580344.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            818..1423
                     /locus_tag="ACJJD2_001867"
     CDS             818..1423
                     /locus_tag="ACJJD2_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HGG7580345.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEVVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            1609..3720
                     /locus_tag="ACJJD2_001868"
                     /pseudo
     CDS             1609..3720
                     /locus_tag="ACJJD2_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            3918..4577
                     /locus_tag="ACJJD2_001869"
     CDS             3918..4577
                     /locus_tag="ACJJD2_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HGG7580346.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            4748..5443
                     /locus_tag="ACJJD2_001870"
     CDS             4748..5443
                     /locus_tag="ACJJD2_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7580347.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAP
                     LTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEASESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
BASE COUNT         1454 a         1403 c         1302 g         1321 t
ORIGIN      
        1 tccgtccccc cggcggcttt ttgcgcggca tcgtcgagcg tgtcgagcgc gtaactgcat
       61 tgccggtagt attcttcccc ggcttcggtc aggctgaggt tgcggctgtt gcggtgcagg
      121 agtttggctt ggacggtgtt ttccaagtgg ctgacgtgtt tgcttgccat tgcggtggag
      181 atgccgagcg cgtcggcggc gcgggtgaag ccgccgcttt ggacgacttg gcggaaaacc
      241 ttgaggctga acagggtgtc catattttct tgtgtggaaa agttgtatca ataaaagcag
      301 tatatatttg aaaaggggaa acatctatac tctaccgcct gaaatgaaga caaatatcaa
      361 aggagctttt atgtccgatt gctgcaaccg tatccaaccg gttttgcttt ctgttttgcg
      421 tatcgtaacc gcctacctgt ttttgttgca cggtacgtcg aaaatcttcg ccttccccat
      481 tgaaatgggc agcggttcgc ccggcgggct gttgctgctt gccggtattt tagaaattgt
      541 cggcggcatt ttgctggtgt tgggcctgtt tgcgcgccct gccgcgtttg ttttgtccgg
      601 ccagatggcg gttgcctatt ttatggcgca cgcttccgga aatgctttgt tcccgattgc
      661 caacggcggc gagtccgcag tgctgttctg cttcgtattc ctctatatcg cggcggcggg
      721 cggcggagca tggtcgctgg acaggctgtt tttcaagcgt aaagcctgaa tcggactgcc
      781 taaagtgtat tttgttgaat gtttttgagg aaaagaaatg acccgtcaat ctctgcaaca
      841 ggctgccgaa agccgccgtt ccatttattc gttaaataaa aatctgcccg tcggcaaaga
      901 tgaagttgtc caaatcgtcg aacacgccgt tttgcacaca ccttcttcgt tcaattccca
      961 atctgcccgc gtggtcgtgc tgtttggcga agagcatgat aaggtgtggc aatttgtcga
     1021 agacgcgctg cgtgccgtcg tgcctgccga cagttttgaa ccgaccgcgc aaaaattgaa
     1081 cctgtttaag gcgggtgcgg caactatttt gttttatgaa gatcaaaatg ttgtcaaagg
     1141 tttgcaggag cagttccctg cttatgccgc caactttccc gtttgggcgg accaggcgaa
     1201 cgctatggtg cagtatgccg tttggacgac acttgccgcg gtcggcgtag gtgcaaacct
     1261 gcaacattac aatcccttgc ccgatgcggc gattgccaaa gcgtggaata tccccgaaaa
     1321 ctggttgttg cgcgcacaaa tggttatcgg cggtattgaa ggggcggcag gtgaaaagac
     1381 ctttgaaccc gttgcagaac gtttgaaagt gttcggcgca taatttcgcg gtcaaaaaaa
     1441 tgccgtctga accctgttca gacggcattt ttcagtatca ggcggcgagt tttccgcatt
     1501 ctgagacctt tgtttacaaa tatcatgttc aatatagtta aaagaaatta ttctcatttc
     1561 ctccgtgagg caatataatt cggttgtttt gttaaattga gtataaaaat gaaaatatca
     1621 tttcatttag ctttattacc cacgctgatt attgcttcct tccctgttgc tgccgccgat
     1681 acgcaggaca atggtgaaca ttacaccgcc actctgccca ccgtttccgt ggtcggacag
     1741 tccgacacca gcgtactcaa aggctacatc aactacgacg aagccgccgt tacccgcaac
     1801 ggacagctca tcaaagaaac gccgcaaacc atcgatacgc tcaatatcca gaaaaacaaa
     1861 aattacggta cgaacgattt gagttccatc ctcgaaggca atgccggcat cgacgctgcc
     1921 tacgatatgc gcggcgaaag cattttcctg cgcggttttc aagccgacgc atccgatatt
     1981 taccgcgacg gcgtgcgcga aagcggacaa gtgcgccgca gtactgccaa catcgagcgc
     2041 gtggaaatcc tgaaaggccc gtcttccgtg ctttacggcc gcaccaacgg cggcggcgtc
     2101 atcaacatgg tcagcaaata cgccaacttc aaacaaagcc gcaacatcgg tgcggtttac
     2161 ggttagtggg caaaccgcag cctgaatatg gacattaacg aagtgctgaa caaaaacgtc
     2221 gccatccgtc tcaccggcga agtcgggcgc gccaattcgt tccgcagcgg catagacagc
     2281 aaaaatgtca tggtttcgcc cagcattacc gtcaaactcg acaacggctt gaagtggacg
     2341 gggcaataca cctacgacaa tgtggagcgc acgcccgacc gcagtccgac caagtccgtg
     2401 tacgaccgct tcggactgcc ttaccgcatg gggttcgccc accggaacga ttttgtcaaa
     2461 gacaagctgc aagtttggcg ttccgacctt gaatacgcct tcaacgacaa atggcgtgcc
     2521 caatggcagc tcgcccaccg cacggcggcg caggattttg atcatttcta tgcaggcagc
     2581 gaaaatggca acttaatcaa acgtaactac gcctggcagc agactgacaa caaaaccctg
     2641 tcgtccaatt tcacgctaaa cggcgactac accatcggcc gttttgaaaa ccacttgacc
     2701 gtaggcatgg attacagccg cgaacaccgc aacccgacct taggttacaa ccgcgccttt
     2761 tccgcctcca tcaaccccta cgaccgcgca agctggccgg cttcgggcag attgcagcct
     2821 attctgaccc aaaaccgcca caaagccgac tcctacggca tctttgtgca aaacatcttc
     2881 tccgccacgc ccgatttgaa attcgtcctc ggcggccgtt acgacaaata cacctttaat
     2941 tccgaaaaca aactcaccgg cagcagccgc caatacagcg gacactcgtt cagccccaac
     3001 atcggcgcag tgtggaacat caatcccgtc cacacacttt acgcctcgta taacaaaggc
     3061 ttcgcgcctt atggcggacg cggcggctat ttgagcatcg atacgttgtc ttccgccgtg
     3121 ttcaacgccg accccgagta cacccgccaa tacgaaaccg gcgtgaaaag cagttggctg
     3181 gacgaccgcc tcagcactac gttgtctgcc taccaaatcg aacgcttcaa tatccgctac
     3241 cgccccgatc caaaaaacaa cccttatatt tatgcggtta gcggcaaaca ccgttcgcgc
     3301 ggcgtggaat tgtccgccat cgggcaaatc atccctaaaa aactctatct gcgcggttcg
     3361 ttgggcgtga tgcaggcgaa agtcgttgaa gacaaagaaa atcccgaccg agtgggcatc
     3421 catttgaata acaccagcaa cgttaccggc aacctgtttt tccgttatac cccgaccgaa
     3481 aacctctacg gcgaaatcgg cgtaaccggt acaggcaaac gctacggtta cgactcaaga
     3541 aataaagaag tgactacgct tccaggcttt gcccgagttg atgccatgct tggctggaac
     3601 cataaaaatg ttaacgttac ctttgccgca gccaatctgt tcaatcaaaa atattggcgt
     3661 tcggactcta tgccgggtaa tccgcgcggc tatactgccc gggtaaatta ccgtttctga
     3721 tgaaatcagg caaaggccgt ctgaaaatcc tgataatccg taaattcagc atacgaactt
     3781 tttgacaggc tttatctaca tcagtataat ccaaaaagaa atagtgccct tggcagtacg
     3841 cattacccat taaatcatag cgggtatgcc gatcccaagg gcttttttat atctttgaca
     3901 aatatagggg aagcaatatg aaaaccgcca ttttgattga cggtgcattt tttattaagc
     3961 gggtacggtc attaggcctg tctcaaaatc cacacgatgc aaaaagaatt gctgatttgg
     4021 ctttccgata ttcgatgctg catctgaaag ataaaatcaa cggcacagat caaatggatg
     4081 atttatatag aattttcttt tacgactgcg tgccgtttga aaagaaaatg cacaatcccg
     4141 tatctcatcg tgccatagat ttttcaaaga ctccggaagc catatttcgt tgcaatctgc
     4201 ataccgaatt gaagaagaag cgtaaattag cgttacgttt aggcaagctg tcggacaata
     4261 cagcatggat attaaaaccc caagtcatga aaaatcttct gaaaaacccg tcaactcaaa
     4321 ttacggaaaa cgatgtcgtg ctcgatgtta aacaaaaagg tgtagatatg cgtataggct
     4381 tggatatttc atctattacc ttaaaaaaac aagccgataa aatcatcttg ttttctggtg
     4441 attccgattt tgtcccagca gccaaattag ccagacggga aggtatcgat tttattcttg
     4501 atcctatgtg gaatcatgtc ccacctgact taatggaaca catcgacgga ttgaagacaa
     4561 aatgtccgaa accgtaaatt actagaacaa aggccgtctg aaaataaggc taattatcta
     4621 agccatattt cagacggcct ttataaaggc tgaaataaaa ctaaacacat tttttcactc
     4681 aaatcgaaca cgccttcaat aaaatgtcat aaaatccgca cattaatctg acacacaaga
     4741 gatacctatg aaactgaaaa ccttagcttt gacttcattg accctgttgg cattggccgc
     4801 ttgtagcaaa caggctgaaa ccagcgttcc ggcagacagc gtccaaagca gctcatctgc
     4861 tccggcagcc ccagccccat tgaccgaagg cgtgaactac actgtattgt ccacgcctat
     4921 cccgcaacag caggccggca aagtcgaagt cttggaattt ttcggctact tctgcccgca
     4981 ttgcgcccat cttgagccgg tcttgagcga gcacatcaaa acgtttaaag acgataccta
     5041 tatgcgccgg gagcatgtcg tgtggggtga tgaaatgaaa cctttggcac gtttggcggc
     5101 cgcagtggaa atggccggtg aatcagataa agccaacagc catattttcg atgcgatggt
     5161 taatcaaaaa atcaatctgg ccgataccga taccctgaaa aaatggctgt ccgagcaaac
     5221 agcgtttgac ggcaaaaaag tattggctgc atttgaggct tctgaaagcc aagcgcgtgc
     5281 ggctcaaatg gaagagttga ccaataaatt ccaaatcagc ggcacaccga ctgtgatcgt
     5341 cggcggcaaa taccaagttg aatttaaaga ctggcagtcc ggtatgacca cgattgacca
     5401 gttggtggat aaagtacgcg aagagcagaa aaagccgcaa taagttgagg attgaatgag
     5461 taaaggccgt ttgaaaatag
//
LOCUS       DBBZXW010000117         5453 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.117, whole genome shotgun sequence.
ACCESSION   DBBZXW010000117 DBBZXW010000000
VERSION     DBBZXW010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5453
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.117"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>5453
                     /locus_tag="ACJJD2_001871"
     CDS             <1..>5453
                     /locus_tag="ACJJD2_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7580348.1"
                     /translation="VNAEGKLVNTGMIAATGENHAVSLHARNVHNSGTVASQDDANIH
                     SQTLDNSGTVLSSGQLTVRNLGRLKNHNNGTIQAARLDMSTGGLDNTGNITQTGSQAL
                     DLVSAGKFDNSGKIGVSDVPQTGLNPNPSVIPQIPSTATGSGSSTVLASKPGSNNPVS
                     PTAPAKNYAGGRIQTTGAFDNAGSINAGGQIDIAAQNGLENSGSLNAAKLRVSGDSFN
                     NTVKGKLQAHDLAVNTQTAKNSGHLLTLTGKIDNRELHNAGEIAANNLTLIHSGRLSN
                     DKKGNIRAAHLQLDTAGLHNAGNILADSGTVTTKNNLRNTGKVSVARLNTEGQTLDNT
                     HGHIEAETVNIQSQQLTNQSGHITATEQLTINSRNVDNQNGKLLSANQAQLAVSDGLY
                     NQHGEIATNRQLSIHDKNQNTLALNNADGTIQSAGNVSLQAKSLANNGTLTAGNKLDI
                     ALTDDFVVERDLTAGKQLNLSIKGRLKNTHTLQASHTLKLNAGNIDNQVTGKIIGGEQ
                     TDITSEQHVDNRGLINSDGLTHIGAGQTLTNTGTGKIYGNHIALDAQILLNREETTEG
                     STKAGAIAARKRLDIGAKEIHNQEGALLSSEGIFAVGNRLDEQHHAAGMADTFVNGSA
                     GLEVQGDALMSVRNMQNINNHFKTETYLAKAEKQVRDYTVLGQNTYYQAGKDGLFDNS
                     QGQKDQTTATFHLKNGSRIEANQWHVRDYHIETYKERIIENRPAHITVGGDLTASGQN
                     WLNKDSRIVVGGRIITDDLNQKEITNQSTTGKGRTDAVGTQWDSVTKKGWYSGRKRQR
                     RTERNHTPYHDTQLFTHDFDTPVSVIQQNAASPSFQPAASAIKLIDGVSTAAVNGQRI
                     HTGNVVSLNNATVTLPNSSLYTTHPDNKGWLVETDPQFADYRRWLGSDYMLQQLQLDT
                     NHLHKRLGDGYYEQKLVNEQIHQLTGYRRLDGYRSDEEQFKALMDNGLTAAKTFGLTP
                     GIALSAEQVARLTSDIVWMENQTVTLSDGSTQTVLVPKVYALARKGDLNTSGGLISAE
                     QVLLKLQNGNLTNSGTIAGRQAVLIQARNINSNGNIQADQIGLKAEKSINIDGGQVQA
                     GRLLTAQAQNINLNGTTQTSGNERNGNTAIDRMAGINVVGSHTEQVDNRTSDGILSLH
                     AGNDINLNAATVSNQVKGGTTQITAGNNLNLGTIHTEHREAYGTLDDENHRHVRQSTE
                     VGSSIRTQNGALLRAGNDLKIRQGELEAEEGKTVLAAGRDVTISEGRQITELDTSVSG
                     KSKGILSSTKTQDRYRFSHDEAVGSNIGGGKMIVAAGQDINVRGSNLISDKGIVLKAG
                     HDIDISTAHNRYTGNEYHESKKSGVMGTGGLGFTIGNRKTTDDTDRTNIVHTGSIIGS
                     LNGDTVTVAGNRYRQTGSTVSSPEGRNTVTAKSIDVEFANNRYATDYAHTQEQKGLTV
                     ALNVPVVQAAQNFIQAAQNVGKSKNKRVNAMAAANAAWQSYQAAQQMQQFAPSSSAGQ
                     GQNNNQSPSISVSITYGEQKSRNEQKRHYTEAAASQIIGKGQTTLAATGSGEQSNINI
                     TGSDVIGHAGTALIADNHIRLQSAKQDGSEQSKNKSSGWNAGVAVKIGNGIRFGITAG
                     GNIGKGKEQGGNTTHRHTHVGSTAGQTTIRSGGDTTLKGAQLIGKGIQADTRNLHIES
                     VQDTETYQSKQQNGNVQVTVGYGFSASGSYRQSKVKADHASVTEQSGIYTGEDGYQIK
                     VRDNTDLKGGIITSTRSAESKGKNRFQTATLTHRDIQNHSRYEGRSFGIGGSFDLNGG
                     WDGTVTDKQGRPTDRISPAAGYGSDGDSKNSTTR"
BASE COUNT         1754 a         1413 c         1236 g         1050 t
ORIGIN      
        1 gtgaatgctg agggtaaact ggtcaacaca ggcatgattg cagcgacggg agaaaatcat
       61 gcggtttcac ttcatgcccg caatgttcat aatagcggta cggttgcctc acaggatgat
      121 gccaatattc acagccagac gctggacaat tcaggtacgg tcttatcctc aggtcaattg
      181 actgtccgta atttaggccg tctgaaaaac cataacaacg gtacgatcca ggctgcacgc
      241 ttagatatgt caacaggtgg tttggataac acaggtaata ttactcaaac aggttcacaa
      301 gcattggatt tggtatctgc aggcaaattc gataacagtg gcaagattgg tgtaagtgac
      361 gttccacaga ccggtttgaa tcccaatcca tcagtcatac cacagattcc gagtactgca
      421 acaggttcag gcagcagcac tgtcttggca tctaagcctg gttcaaacaa tcccgtttca
      481 cctacagcac ctgcaaaaaa ctacgccgga ggacgcattc aaacaacagg agcatttgac
      541 aatgcaggat caatcaatgc aggtgggcaa attgacattg ccgcccaaaa cggtttggaa
      601 aattcgggta gtctgaatgc ggctaaacta cgagtatcag gcgattcatt taacaatacg
      661 gtaaaaggca aactccaggc acacgatctg gctgttaaca ctcaaactgc taaaaacagc
      721 ggtcacttat taactctaac cggcaagatt gacaaccgtg aactgcataa tgccggagaa
      781 attgccgcca acaatctgac actcattcat tcgggccgct tgagcaatga taaaaaaggc
      841 aatattcgag ctgcacattt acagcttgat accgccggtt tacataatgc aggtaacatt
      901 cttgccgata gtggaaccgt taccaccaag aataatcttc gcaatacagg aaaagtttct
      961 gttgcacgac taaataccga aggtcagact ctagataata cgcacggaca tatagaggct
     1021 gaaacggtta acatccaaag tcagcaactg actaaccaaa gtggccatat tactgctacc
     1081 gaacaactga ctatcaatag tcgaaatgta gacaaccaaa acggcaaact cctatctgca
     1141 aaccaagcac aattagctgt ttcagacggc ctatacaacc aacatggtga aattgccacc
     1201 aaccggcagt tgtctattca cgataaaaat caaaacactt tggcgttaaa caatgcggat
     1261 ggcacgattc aatctgccgg taatgtatcg ctacaagcca aatcactcgc caacaatggc
     1321 acattaacag ccggtaacaa actggatatt gctttgacgg acgatttcgt cgtagagcgc
     1381 gacctcactg caggcaaaca attaaatcta agcataaaag gccgtctgaa aaatacccat
     1441 accctacaag caagccatac gctcaaactc aatgccggca atatagataa ccaagttaca
     1501 ggcaaaatta ttggtggaga acaaacggac atcacatccg aacagcatgt tgacaacagg
     1561 ggcttgatca acagcgacgg tttgacccac atcggtgcag gtcaaaccct gaccaacacc
     1621 gggacaggca aaatctatgg caaccatatt gccctggacg cgcaaatact gcttaaccgg
     1681 gaagaaacga cggaaggcag taccaaagcg ggggcaatag ctgcaaggaa acgtttggat
     1741 attggagcga aagagattca taaccaagaa ggtgccctac tatccagcga aggtattttt
     1801 gccgtaggta atcgactgga tgaacaacat catgcggcag gcatggccga tacctttgtt
     1861 aatggcagtg ccggtttgga agtacaaggt gatgcattga tgtccgttcg gaatatgcag
     1921 aatatcaata atcactttaa aacagagaca tacttagcca aagcagaaaa gcaagttcgt
     1981 gactacaccg tactggggca aaatacctac tatcaggcag gaaaagacgg tttattcgac
     2041 aactcgcaag gacaaaaaga ccaaactact gctacgttcc atttaaaaaa tggttctcgt
     2101 attgaggcca accaatggca tgtccgagac taccacatcg agacttataa agaacgcatc
     2161 atcgaaaacc ggccggcaca cattactgtg ggcggtgatt tgactgcctc aggtcaaaat
     2221 tggctgaaca aagacagccg gattgtagta ggcgggcgta ttatcactga tgatttaaac
     2281 cagaaagaaa ttaccaatca aagtacaaca ggcaaaggtc gcacagatgc tgtcggcaca
     2341 cagtgggatt cagttacaaa aaaaggatgg tacagcggta gaaaaagaca acgccgtact
     2401 gaaagaaacc atactcctta ccatgatacc caactattta cccacgactt cgacacgcct
     2461 gtatccgtca tccaacagaa tgccgcctcc ccttcctttc aacccgctgc atctgcaatc
     2521 aaactgattg acggagtatc cacggcagcc gtcaatggtc agcgcatcca taccggtaat
     2581 gtggtctcgt taaataacgc tactgttact ctgcctaaca gcagcctcta taccacccat
     2641 cctgacaata aaggctggtt ggttgaaacc gatcctcaat ttgcagacta ccgccgctgg
     2701 ttgggcagcg actacatgtt gcaacaactg caattggaca ccaatcatct acacaaacgg
     2761 ctaggcgacg gctactacga acaaaaactt gttaatgaac aaatccatca gttaacaggc
     2821 taccgccgac tcgacggcta caggagtgat gaagaacaat tcaaagctct gatggacaac
     2881 ggccttactg ctgccaaaac attcggtctc accccaggta tcgccttgag tgcagagcaa
     2941 gttgcccgct taacttcaga tatcgtttgg atggaaaatc aaaccgtcac cctgtctgac
     3001 ggttcgactc aaaccgtact ggttcctaaa gtctatgccc tggcgcgcaa aggtgatctc
     3061 aatacctccg gtggcctgat tagtgccgaa caagtcttac ttaaactgca aaacggcaac
     3121 ctgactaaca gcggtaccat tgcggggcga caggccgtac tcatccaggc acggaatatt
     3181 aacagcaacg gtaacattca agccgaccaa atcggcttaa aagctgaaaa aagtatcaat
     3241 atcgacggcg ggcaggtaca agcaggcaga ctgctgactg cccaagcgca aaatatcaac
     3301 cttaacggta caacccaaac ttccggtaat gaacgtaacg gcaataccgc catcgatcgt
     3361 atggccggca ttaacgtggt cggaagccat actgagcaag tagataacag aacttcagac
     3421 ggcatcctat ccctgcatgc cggcaacgat atcaacctca atgcggccac cgtctctaac
     3481 caagttaaag gcggcactac ccaaattacc gccggcaata atctcaacct cggcaccatt
     3541 cataccgaac atcgcgaagc ctatggtaca ttagatgacg agaaccatcg ccatgtccgc
     3601 caaagtaccg aagtcggcag cagtatccgc acgcaaaacg gcgcactgct tagagccggt
     3661 aacgacttaa aaatccgcca aggcgaactg gaggccgaag aaggcaaaac cgtccttgcc
     3721 gcgggacgtg atgtcactat cagcgaagga cgccaaataa ccgaactgga tacctcggta
     3781 agcggaaaaa gcaaaggcat cctttccagt accaaaacac aggatcgcta ccgcttcagt
     3841 catgatgaag cagtcggcag caacatcggc ggcggcaaaa tgattgttgc agccgggcag
     3901 gatatcaatg tacgcggcag caaccttatt tctgataagg gcattgtttt aaaagcagga
     3961 cacgacatcg atatttctac tgcccataat cgctataccg gcaatgaata ccacgagagc
     4021 aaaaaatcag gcgtcatggg tactggcgga ttgggcttta ctatcggtaa ccggaaaact
     4081 accgatgaca ctgatcgtac caatattgtc catacaggca gcattatagg cagcctgaat
     4141 ggagacaccg ttacagttgc aggaaaccgc taccgacaaa ccggcagtac cgtctccagc
     4201 cccgaggggc gcaataccgt cacagccaaa agcatagatg tagagttcgc aaacaaccgg
     4261 tatgccactg actacgccca tacccaggaa caaaaaggcc ttaccgtcgc cctcaatgtg
     4321 cccgttgtcc aagctgcaca aaacttcata caagcagccc aaaatgtggg caaaagtaaa
     4381 aataaacgcg ttaatgccat ggctgcagcc aatgctgcat ggcagagtta tcaagcagcc
     4441 caacaaatgc aacaatttgc tccaagcagc agtgcgggac aaggtcaaaa caacaatcaa
     4501 agccccagta tcagtgtgtc catcacctac ggcgaacaga aaagtcgtaa cgagcaaaaa
     4561 agacattaca ccgaagcggc agcaagtcaa attatcggca aagggcaaac cacacttgcg
     4621 gcaacaggaa gtggggagca gtccaatatc aatattacag gttccgatgt catcggccat
     4681 gcaggtactg ccctcattgc cgacaaccat atcagactcc aatctgccaa acaggacggc
     4741 agcgagcaaa gcaaaaacaa aagcagtggt tggaatgcag gcgtagccgt caaaataggc
     4801 aacggcatca ggtttggaat taccgccgga ggaaatatcg gtaaaggtaa agagcaaggg
     4861 ggaaatacta cccaccgcca cacccatgtc ggcagcacag ccggacaaac caccatccgc
     4921 agcggcgggg ataccaccct caaaggtgcg cagctcatcg gcaaaggcat acaggcagat
     4981 acgcgcaacc tgcatataga aagtgttcaa gatactgaaa cctatcagag caaacagcaa
     5041 aacggcaatg tccaagttac tgtcggttac ggattcagtg caagcggcag ttaccgccaa
     5101 agcaaagtca aagcagacca tgcctccgta accgagcaaa gcggtattta taccggagaa
     5161 gacggctatc aaatcaaagt cagagacaac acagacctca agggcggtat catcacctcc
     5221 acccgaagtg ccgaaagcaa agggaaaaac cgctttcaga cggccaccct cacccatcgc
     5281 gacattcaaa accacagccg ctacgaaggc agaagcttcg gcataggcgg cagtttcgac
     5341 ctgaacggcg gctgggacgg cacggttacc gacaaacaag gcaggcctac cgacaggata
     5401 agcccggcag ccggctacgg cagcgacgga gacagcaaaa acagcaccac ccg
//
LOCUS       DBBZXW010000118         5394 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.118, whole genome shotgun sequence.
ACCESSION   DBBZXW010000118 DBBZXW010000000
VERSION     DBBZXW010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5394
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.118"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            305..2455
                     /locus_tag="ACJJD2_001872"
     CDS             305..2455
                     /locus_tag="ACJJD2_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7580349.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGGSFDLDSVDTEAPRPAPK
                     YQDVSSEKPQAQKDQGGYGFAMRFKRRFWLPRGKEDEVKLKESDWEETGLPDDPKNLP
                     KRQKSVIDEVKTDDGSNNIHSSPYLMQSNHQNGSTNGGANQPKNEVTDYKDFKYVYSG
                     WFYKHAKSEIKRENGSSSAKSGDDGYIFYHGEKPSRQLPASEKVIYKGVWHFVTDTKK
                     GQKFNDILGTSKGQGDKYSGFSGDDDEQYSNKNESMLKDGQEGYGFTSNLEVDFNNKK
                     LTGKLIRNNRVTNATPNDKYTTQYYSLDAQITGNRFNGKAIATDKPQANETKPHPFVS
                     DSSSLSGGFFGPKGEELGFRFLSDDKKVAVVGSAKTKDNTANGNTAAASGGTGAAASG
                     GAAAMPSENSKLTTVLDAVELTLNDKKIKNLDNFSNAAQLVVDGIMIPLLPKDSESGN
                     NQANQGTNGGTAFTYKTTYTPKSDEKDTQAGMAENGNPAASNTAGDTNGKTKTYAVEV
                     CCSNLNYLKYGLLTRKTAGNTGEGGNGSPTAAAQTAQGAQSMFLQGERTDENKIPSEQ
                     NVVYRGSWYGHIANGTSWSGNASNATSGNRADFTVNFGEKKITGTLTAENRQQATFTI
                     EGMIQDNGFSGTAKTADLGFDLDQSNTTGTPKAYITDAKVQGGFYGPKAEEMGGWFAY
                     PGDSQTQPSASGSGASAANSATVVFGAKRQQLVQ"
     gene            2542..5292
                     /gene="tbpA"
                     /locus_tag="ACJJD2_001873"
     CDS             2542..5292
                     /gene="tbpA"
                     /locus_tag="ACJJD2_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HGG7580350.1"
                     /translation="MQQQYLFRLNILCLSLMTALPVYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDDSKYADFIVEEECESKNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDENRKYGPIRGNGKYAGNHKYGGLFTNGENGALVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGSN
                     LRHQDYYYQHANRAYSSKTPPKTGNGGSNASPNGSQDNPYWVSIGGGNVVTGQICRLG
                     NNTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRT
                     LSWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAG
                     IVFKGDFGNLEASWFNNAYRDLIVRGYEAQIQNGKETAKGDPAYLNAQSARITGINVL
                     GKIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGY
                     DQPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYT
                     IKKHFTLRAGVYNLLNHRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEM
                     KF"
BASE COUNT         1556 a         1358 c         1380 g         1100 t
ORIGIN      
        1 tcggaaatga ctgaaactca aaaaactgga ttcccacttt tgtgggaatg acgcgattag
       61 agtttcaaaa tttattctaa atagctgaaa ctcaacgcac tggattcccg cctgcgcggg
      121 aatgacggga tatacgtggg aatgacggga tataggtttc cgtgcggacg cgttcggatt
      181 cacaactgcg cgggaatgac gggattttgg tgtattccct aaaaaaaata aaaaagcatt
      241 tgcaaatttg ttaaaaataa ataaaataat aatctttatc attctttaat tgaattgggt
      301 ttatatgaac aatccattgg taaatcaggc tgctatggtg ctgccggtgt ttttgttgag
      361 tgcttgtttg ggcggaggcg gcggcagttt cgatcttgat tctgtcgata ccgaagcccc
      421 gcgtcccgcg ccaaagtatc aagatgtttc ttccgaaaag ccgcaagccc aaaaagatca
      481 aggcggatac ggtttcgcga tgcgcttcaa gcggcggttc tggttgccgc ggggaaaaga
      541 agacgaggtt aaactgaaag agagtgattg ggaggagacg ggattacctg acgatcccaa
      601 aaacttacct aagcgacaga aatcggttat tgatgaagta aaaacagacg atggcagcaa
      661 taatattcat tcttcccctt atctcatgca atcaaaccat caaaacggca gcactaatgg
      721 cggtgcaaac caaccaaaaa acgaagtaac agattataaa gattttaaat atgtttattc
      781 cggctggttt tacaaacacg cgaaaagcga aatcaaaaga gaaaacgggt caagcagtgc
      841 aaaatctggc gacgacggct atatctttta tcacggtgaa aaaccttccc gacaacttcc
      901 cgcttctgaa aaagttatct acaaaggcgt atggcatttt gtaaccgata ctaaaaaggg
      961 acaaaaattt aacgatattc ttggaacctc aaaaggacaa ggagataagt acagcggatt
     1021 ttcgggcgat gatgatgaac aatattctaa taaaaacgaa tccatgctga aagatggtca
     1081 agagggttat ggttttacct caaatttaga agtggatttc aataataaaa aattgacggg
     1141 caaactgata cgcaataata gagttacaaa cgctactcct aacgataaat acaccaccca
     1201 atactacagc cttgatgccc aaataacagg caaccgcttc aacggtaagg cgatagcgac
     1261 cgacaaacca caagcgaatg aaaccaagcc acatcccttt gtttccgact cgtcttcttt
     1321 gagcggcggc tttttcggcc cgaagggtga ggaattgggt ttccgctttt tgagcgacga
     1381 taaaaaagtt gcggttgtcg gcagcgcgaa aaccaaagac aacaccgcaa atggcaatac
     1441 tgcggcggct tcaggcggca caggtgcggc agcatcgggc ggtgcggcgg ctatgccgtc
     1501 tgaaaacagt aagctgacca cggttttgga tgcggttgaa ttgacactaa acgacaagaa
     1561 aatcaaaaat ctcgacaact tcagcaacgc cgcccaactg gttgtcgacg gcattatgat
     1621 tccgctcctg cccaaggatt ccgaaagcgg gaacaatcaa gccaatcaag gtacaaatgg
     1681 cggaacagcc tttacctaca aaacaaccta cacgccgaaa agcgatgaaa aagacaccca
     1741 agcaggtatg gcggagaatg gcaatccagc cgcttcaaat acggcaggtg ataccaatgg
     1801 caaaacaaaa acctatgcag tcgaagtctg ctgttccaac ctcaattatc tgaaatacgg
     1861 gttgctgacg cgcaaaactg ccggcaacac gggggaaggc ggcaacggca gcccaaccgc
     1921 cgccgcccaa acggcacagg gcgcacaaag tatgttcctc caaggcgagc gcaccgatga
     1981 aaacaagatt ccaagcgagc aaaacgtcgt ttatcggggg tcttggtacg ggcatattgc
     2041 caacggcaca agctggagcg gcaatgcttc caatgcaacg agtggcaaca gggcggactt
     2101 taccgtgaat tttggcgaga aaaaaattac cggcacgtta accgctgaaa acaggcagca
     2161 ggcaaccttt accattgagg gaatgattca ggacaacggt ttttccggta cggcgaaaac
     2221 tgctgactta ggttttgatc tcgatcaaag caataccacc ggcacaccta aggcatatat
     2281 cacagatgcc aaggtgcagg gcggttttta cgggcctaaa gccgaagaaa tgggtggatg
     2341 gtttgcttat ccgggcgaca gtcagacgca gccgtccgct tcggggtcag gcgcatcagc
     2401 cgccaacagc gcgaccgtgg tattcggtgc gaaacgccaa cagcttgtgc aataagcacg
     2461 gctgccgaac aatcgagaat aaggcttcag acggcatcgc tccttccgat gccgtctgaa
     2521 agcgaagagt agggaaacac tatgcaacag caatatttgt tccgattaaa tattttatgc
     2581 ctgtcgctga tgaccgcgct gcccgtttat gcagaaaatg tgcaagccgg acaagcacag
     2641 gaaaaacagt tggataccat acaggtaaaa gccaaaaaac agaaaacccg ccgcgataac
     2701 gaagtaaccg gtttgggcaa attggtcaaa accgccgaca ccctcagcaa ggaacaggta
     2761 ctcgatatcc gcgacctgac gcgttacgac cccggcatcg ccgtcgtcga acaggggcgc
     2821 ggcgcaagct cgggttactc gatacgcggt atggacaaaa accgcgtttc cttgacggtg
     2881 gacggcttgg cgcaaataca gtcctacacc gcgcaggcgg cattgggcgg gacgaggacg
     2941 gcgggcagca gcggcgcaat caatgaaatc gagtatgaaa acgtcaaagc tgtcgaaatc
     3001 agcaaaggct caaactcggt cgaacaaggc agcggcgcat tggcgggttc ggtcgcattt
     3061 caaaccaaaa ccgccgacga tgttatcggg gaaggcaggc agtgggggat tcagagtaaa
     3121 accgcctatt ccggcaaaaa ccgggggctt acccaatcca tcgcgctggc ggggcgcatc
     3181 ggcggtgcgg aggctttgct gatccacacg ggtcggcgcg cgggggaaat ccgcgcccac
     3241 gaagatgccg gacgcggcgt tcagagcttt aacaggctgg tgccggttga agacgacagc
     3301 aaatacgccg atttcatcgt tgaagaagaa tgcgaaagca aaaattacga aacgtgtaaa
     3361 gcgaatccga aaaaagatgt tgtcggcaaa gacgaacgtc aaacggtttc cacccgagac
     3421 tacacgggac ccaaccgctt ccttgccgat ccgctttcat acgaaagccg atcgtggctg
     3481 ttccgcccgg gttttcgttt tgaaaacaaa cggcactaca tcggcggcat actcgaacac
     3541 acgcaacaaa ctttcgacac gcgcgatatg acggttccgg cattcctgac caaggcggtt
     3601 tttgatgaaa atagaaaata cggaccgata agaggcaacg gcaaatacgc gggcaaccac
     3661 aaatacggcg gactgtttac caacggcgaa aatggtgcgc tggtgggcgc ggaatacggt
     3721 acgggcgtgt tttacgacga gacgcacacc aaaagccgct acggtttgga atatgtctat
     3781 accaatgccg ataaagacac ttgggcggat tatgcccgcc tctcttacga ccggcagggc
     3841 atcggtttgg acaatcattt tcagcagacg cactgttctg ccgacggttc ggacaaatat
     3901 tgccgtccga gtgccgacaa gccgttttcc tactacaaat ccgaccgcgt gatttatggg
     3961 gaaagccaca ggctcttgca ggcggcattc aaaaaatcct tcgataccgc caaaatccgc
     4021 cacaacctga gcgtgaatct cgggtttgac cgctttggct ctaatctccg ccatcaggat
     4081 tattattatc aacatgccaa ccgcgcctat tcgtcgaaaa cgccccctaa aaccggcaac
     4141 ggcggctcaa acgccagccc caacggcagc caagacaacc cctattgggt cagcataggc
     4201 gggggaaatg tggttacggg gcaaatctgc cgcttgggca acaatactta tacggactgt
     4261 acgccgcgca gcatcaacgg caaaagctat tacgcggcag ttcgggacaa tgtccgtttg
     4321 ggcaggtggg cggatgtcgg cgcggggttg cgctacgact accgcagcac gcattcggac
     4381 gacggcagcg tttccaccgg cacgcaccgt accctgtcct ggaacgccgg catcgtcctc
     4441 aaacctgccg actggctgga tttgacttac cgcacttcaa ccggcttccg cctgccctcg
     4501 tttgcggaaa tgtacggctg gcgggcgggt gttcaaagca aggcggtcaa aatcgatccg
     4561 gaaaaatcgt tcaacaaaga agccggcatc gtatttaaag gcgatttcgg caacttggag
     4621 gcaagttggt tcaacaatgc ctaccgcgat ttgattgtcc ggggttatga agcgcaaatt
     4681 caaaacggca aagaaacagc caaaggcgac ccggcttacc tcaatgccca aagcgcgcgg
     4741 attaccggca tcaatgtttt gggcaaaatc gattggaacg gcgtatggga taaattgccc
     4801 gaaggttggt attctacatt tgcctataat cgtgtccgtg tccgcgacat caaaaaacgc
     4861 gcagaccgca ccgatattca atcacatctg tttgatgcca tccaaccttc gcgctatgtc
     4921 gtcggcttgg gctatgacca accggaaggc aaatggggtg tgaacggtat gctgacttat
     4981 tccaaagcca aggaaatcac agagttgttg ggcagccggg ctttgctcaa cggcaacagc
     5041 cgcaatacaa aagccaccgc gcgccgtacc cgcccttggt atattgtgga tgtgtccggt
     5101 tattacacga ttaaaaaaca cttcaccctc cgtgcgggcg tgtacaacct cctcaaccac
     5161 cgctatgtta cttgggaaaa tgtgcggcaa actgccggcg gcgcagtcaa tcaacacaaa
     5221 aatgtcggcg tttacaaccg atatgccgcc cccggccgaa actacacatt tagcttggaa
     5281 atgaagttct aaacgtccaa acgccgcaaa tgccgtctga aaggcttcag acggcatttt
     5341 ttacacaatt cccgccattt tccatcattc ccaacaacac cgtaatcctg aaat
//
LOCUS       DBBZXW010000119         5317 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.119, whole genome shotgun sequence.
ACCESSION   DBBZXW010000119 DBBZXW010000000
VERSION     DBBZXW010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5317
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.119"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            160..855
                     /gene="pgl"
                     /locus_tag="ACJJD2_001874"
     CDS             160..855
                     /gene="pgl"
                     /locus_tag="ACJJD2_001874"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HGG7580351.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            836..1822
                     /locus_tag="ACJJD2_001875"
     CDS             836..1822
                     /locus_tag="ACJJD2_001875"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HGG7580352.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1872..2720
                     /gene="hexR"
                     /locus_tag="ACJJD2_001876"
     CDS             1872..2720
                     /gene="hexR"
                     /locus_tag="ACJJD2_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HGG7580353.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2841..4487
                     /gene="pgi"
                     /locus_tag="ACJJD2_001877"
     CDS             2841..4487
                     /gene="pgi"
                     /locus_tag="ACJJD2_001877"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG7580354.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETEPQKHDSSTERLINLYLQTNRK"
     gene            4501..5052
                     /locus_tag="ACJJD2_001878"
     CDS             4501..5052
                     /locus_tag="ACJJD2_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HGG7580355.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTIQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1359 a         1478 c         1403 g         1077 t
ORIGIN      
        1 aaggcgaggc aacgctgtac tggtttaaat ttaatccact ataaaaaaaa gcagtcccga
       61 tatttggtat caaaagcata aacaactgtt cggccgacat attgctcaac ccgtttccat
      121 aacggaatat gccgtctgaa ataaaaaaag gacacaaata tgtttgtttg gcacgaatac
      181 gaaaatgcgg cagaagcggc gcagtctttg gctgacgcag tggcggatgc tttgcagggc
      241 gcactggacg agaagggcgg tgcggtgttg gcagtttccg gcggacgttc gccgattgca
      301 tttttcaacg ccctgtcgca aaaagatttg gattggaaaa acgtcggcat caccttggca
      361 gatgaacgca tcgtgccgac cgtccacgcc gacagcaata ccggtttggt gcgcgaatac
      421 ctgttgaaga acaaagcgga agcggcaatg tggattccta tggtggaaga cggaaaaact
      481 gaaaccgaat tacatcccga tgctgttgtc gattatgcac tgaaacatta caaacagccc
      541 gatgttttgg ttttgggtat gggaaacgac gggcatacgg cttcgatttt cccgaaagct
      601 ccgcagtttc agacggcaat cgacggttcg gcaggtgtcg cgctggtgca taccacgccc
      661 gttaccgcgc cgcacgagcg cgtcagtatg accttggatg cgattgccca tacggggcat
      721 gtgtttttgg cgatacgggg cgaagagaaa aaagccgtgt tcgaccaagc cgcacaaggc
      781 gaaaaccgcg aatatccgat caacctcgtt ttgaaccatc aaggagtgaa ctgccatgtc
      841 ttctacgccg aataaacaag ccggatatcc ccgactggtc gccgatatcg gcgggacgaa
      901 tgcacgcttt gcgctggaaa ccgcgccgcg cgtcattgaa aaagccgccg tgcttccgtg
      961 taaagactac gatacggtta ccgatgcggt gcgtgcctat ctgaatcaaa gcggtgcaac
     1021 agccgtacgg cacgcggcat ttgccatcgc caacccgatt ttgggcgact gggtgcagat
     1081 gaccaaccac cattgggcgt tttccatcga aaccacccgt cagactttgg ggctggacac
     1141 cctcatcctt ttgaacgact ttaccgcgca ggcattggcg gtaacgcaga cttcaagcaa
     1201 agacctgatg caggtaggcg ggcaaaagcc tgtcgaattt gcccccaaag ccgttatcgg
     1261 ccccggtacc ggcctgggcg tgagcggatt ggtgcacagc cacgcaggct gggtggcttt
     1321 ggcgggcgag ggcgggcata ccagtttccc gccgtttgac gatatggaag tgctgatttg
     1381 gcagtacgcc aaaaacaaat acggccatgt ttccgccgaa cgctttttga gcggcgcggg
     1441 cttgagcttg gtttacgagg ctttggctgc aaaacagaaa gccaaacccg ccaaactgat
     1501 gccgtctgaa atcacggaaa aggctttgag cggcgcgtcg cctttgtgcc gtcagacttt
     1561 ggacatcttc tgcgccatgc tcggcacggt tgcttccaac ctcgccctga cgctgggcgc
     1621 gcgcggcggc gtgtacctgt gcggcggcat tattccccgc gtgttggaat atttcaaaac
     1681 ttccccgttc cgcagccgtt tcgagaacaa gggcaggttt gaagcatatc ttgccgcgat
     1741 tcccgtgtat gtcgtcttga gcgagtttcc cggaatttcc ggtgcggctg cggctctcga
     1801 caaccatttg agaaacgttt aaccacagcg gctccttgca gcggggctgc attatcgaag
     1861 ggcatatcat tatgttaagc aaaatcagcg aatcactggc aaacctttcc ggtgcggaac
     1921 gcaaagtcgc cgaatgtgca ttggcggaac ccaaatggtt cgtccatgcc gccgttgccg
     1981 aaattgccga acgtgcgtcc gtcagccagc cgaccgtcat ccgattctgc cgcagcttgg
     2041 gttataaagg gctgcccgag ttcaagctcg ccttgtccgc cagcatcggt catgagggta
     2101 tgccctatgt ccacgaagaa ctcaacgccg acgacgatat ggcaagcgtg gtcgagaaag
     2161 tgttgggcaa tgccgccgcc tcgctgttgg gcgaacgccg cttcctgaaa gagtcggagc
     2221 tggaaaacgc cattgccacg ctgatgcacg cccgtcgcgt cgagttttac ggtgtcggca
     2281 attccggcat tgtggcacag gacgcgcagc ataaattttt ccgtttcggc atgtccaccg
     2341 tcgcctatgt cgatacgcac acgcagctga tggcggcatc tgttttgagc gatcaggatg
     2401 ttttggttgc catttccaac acgggttcgt ctatcgaact tttggatgcg gtcagcatcg
     2461 ccaaagaaaa cggcgcgtct gtcatcgcac tgacccgcaa cgattcgcct ctggcgcaac
     2521 ttgccgactg cgtgttgagc gttgccacac aggaaaatgc cgaactctac acgcccatgg
     2581 tttcccgcct cttgcagctt gccgtcatcg acattctcgc catcggactt gccctgcgct
     2641 tgggcgatgc tgccagcctg caattgcaga aaagcaaaaa aagcatacac aacaagcaca
     2701 tcgattacga caaagattga ccttcagacg gcatcccaca aatgccgtct gaaatgccga
     2761 acaacggtcg tcggcggctt gcggcagttt ccggcagcct tttcatccca caacaaaaaa
     2821 cctcattcag gagcatatag atgaaacacc ttcacgactt acccgcatgg tcgaaattgt
     2881 ggaaccactt tgacgacagc aaaacattgc atatgcgcga aatgttcgag caagacccgc
     2941 agcgtgcgga acgctactgg ctgcaagtcg gcggactgac gctggactac tccaaaaacc
     3001 gcatcaacga cgaaaccatg tcgcttttgt tcgagcttgc ccgagaagca ggcgtgccgg
     3061 agcggatgcg gcagatgttc cacggcgaaa aaatcaatac caccgaaaac cgcgccgtcc
     3121 tgcatgtcgc ccttcgcaac cgcaccaatt cgccgattgt ggttgacggt gaagatgtga
     3181 tgcccaaagt caaccgcgtt ttgcaacgta tgggcgaatt tgcacacgaa gtccgcagcg
     3241 gaagctggct gggctatacc aaccaagtca ttaccgacgt tgtcaacatc ggcatcggcg
     3301 gatcggattt gggcccgctg atgatgtgta ccgcgctcaa acctttcggt catccgcgcc
     3361 tcaatatgca cttcgtctcc aacgtggacg gctcgcaact gcgcgacgta ttgtccaaag
     3421 tccaccccga aaccacgctg ttcatcatcg cctccaaaac atttaccacg caggaaacgc
     3481 tgaccaacgc gctgaccgcg cgcgaatggt ttttgaatca tgcgggcgac gaagaagccg
     3541 ttgccaaaca cttcgccgcc gtttccacca atcaaaaagc cgtcgccgaa ttcggcatcg
     3601 acaccgccaa tatgtttgaa ttttgggatt gggtcggcgg tcggtacagc ctgtggtccg
     3661 ccatcggatt gccgattatg ctgtatctcg gcgaagaaaa cttcattgaa atgctcaacg
     3721 gcgcgcacct gatggaccaa cacttcatca acacaccgct cgagcgcaac ctgcccgtca
     3781 ttctcgccct catcggcatc tggtatatca actactacgg cggcggcagc cacgtcatcg
     3841 cgccttacga ccaacatttg caccgcctgc ccaaattcat ccagcagctc gatatggaaa
     3901 gcaacggcaa acaggttacg ttggacggca aagcagtcgg acacgaaacc tcgccgatta
     3961 tctggggcga aacgggcatt aacggccagc acgccttctt ccaactgctg caccaaggca
     4021 cgcacattac ccccatcgac ctgattgcct cgcttgaaaa acgcagcaac ctgcccggac
     4081 accacgaaat cctgcttgcc aacgtcttcg cccaagcaga agcctttatg cgcggcaaaa
     4141 cccccgacga agtccgcgcc gaactcaaag cgcagggtat ggatgaggcg cgcatcgaag
     4201 agctggtccc gcacaaaacc ttctccggca accgcccgac caacctcatt ctcatggaca
     4261 aggtcaaccc gcgcaatatg ggcagcctga ttgccatgta cgaacacaaa accttcgtac
     4321 aaggcatcat ttggggcatc aacagcttcg accagtgggg cgtggaactc ggcaaacaac
     4381 tggctaaaac cattttgggc gaactgaccg gcgaaaccga gccgcaaaag cacgacagtt
     4441 cgaccgaacg cctgatcaac ctctacctgc agaccaaccg caaataaaac ctgcggaaaa
     4501 atgccgtctg aacgccgacc gtttcagacg gcatttttat cgaacaggaa aaccgtcggt
     4561 aaacttgcag agcgtgtgca atcccgatat gatggtttgc ataaatttaa acatatatgt
     4621 tccgcagcta tggcactgat taaagagccg ttggacaaag cgaaacaaag gaacgaagaa
     4681 cttgaagcgg cagaagaagc ggcggcgcag gaggcattgg gtcgggagca ggaagtcgac
     4741 cgcgtatccg aatgggaaga acgctacaag ctgtcgcgca gcgagttcga gcaattctgg
     4801 aaaggattgc ctcaaaccat acagaataag ctgcaagcct cacagaaaac atggaaaagc
     4861 gggatggata aaatctgtgc caacaatgcg aaagctgaag gtgaaacgcc aaacggcata
     4921 aaattcagcg aactggcatg caaaacggcg gaaaccgaag cacgcttgga agagctgcac
     4981 aaccgtaaaa aagcccttat cgacgaaatg gccagggaag cggacaagaa agaactgcca
     5041 aagcggctct gaacagcgcg gttcaggcac tgcccgccga tattgccgaa accgtcatgc
     5101 ccgagtaccg caactgacaa aacggtttga atgccaaatg cgccgacggc gacgaatacg
     5161 gcgtggcaca atctgactgc cgtaccagag aaatcaatgc gaaaaccaaa gaaatccaag
     5221 gttatctgat tgactgaaac ttggatgcgg gaatgtcggc ggcttttgcg tttttgtcgt
     5281 ttttatagtg aattaaattt aaaccgatac agcgttg
//
LOCUS       DBBZXW010000120         5311 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.120, whole genome shotgun sequence.
ACCESSION   DBBZXW010000120 DBBZXW010000000
VERSION     DBBZXW010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.120"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            144..2321
                     /locus_tag="ACJJD2_001879"
     CDS             144..2321
                     /locus_tag="ACJJD2_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7580356.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAKPSIETTPVNQPAVGAAMRLPRRNIAAFDKNGNEIPDSKQAEEYLPLKEE
                     DILFLDGTPKEQADKLKKEINGRYPNVTIYTSDLKDAVYKYEHVRAGYVYTRFGTDEI
                     EQNSGGKQVTHRLGYDGFVYYSGERPSQSLPSAGTVKYSGNWQYMTDVKRHRAGKAVG
                     IDNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDKKTLTGQLIKNQYVQKKTD
                     EKKPLTIYNITAKLDGNRFTGSAKVNPDLAKNPAGNERLFFHADADQRLEGGFFGDNG
                     EELAGRFISNDNSVFGVFAGKKTETANAADTKPALPSGKHTKILDSLKISVDEATDGH
                     ARKFAISSMPDFGHPDKLLVEGREIPLVNKEQIIKLADGRKMTVSACCDFLTYVKLGR
                     IKTDRPAAKPKAQDEDSEDEIGESEENEDEISDEEGTEDEVVEDEGSEEDEVSEGDNG
                     ENEEEIAEEETEEEVDEAEEEKVEEPEEELPAEEGNGGSGSILPTPEAPKGRDIDLFL
                     KGIRTAEADIPKTGKAHYTGTWEARIGVPDKKDDQPGTTFIQKDSYANQGAKAEFDVD
                     FGAKSLSGKLTEKNDTHPAVYIENGVIDGNGFHATARTRDNGIDLSGQGSTSPQSFKA
                     NNLLVTGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDNKEVEK"
     gene            2318..5152
                     /gene="lbpA"
                     /locus_tag="ACJJD2_001880"
                     /gene_synonym="tbpA"
     CDS             2318..5152
                     /gene="lbpA"
                     /locus_tag="ACJJD2_001880"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HGG7580357.1"
                     /translation="MNKKHGFQLTLTALAVAAAFPSYAANPETAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTHDIQSQDKTGQFFLVEGENTL
                     KPVAKLAGYGIYLNRQLNRWVKERIEKNQPLSAEEEAMVREAQARHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEADKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVRGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEST
                     GFDEKNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYF
                     DFSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQ
                     ELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVAD
                     HKTKLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNR
                     IKPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELA
                     YLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAE
                     STANRHGGDSNYGRYAAPGRNFSLALEMKF"
BASE COUNT         1518 a         1247 c         1411 g         1135 t
ORIGIN      
        1 ggaatgacgg aatgtatctg tactgtctgc ggctcgtcgc cttgtcctga tttttgttaa
       61 ttcactataa aaacgggttg atattatctg tacatattaa tataatgata attattatta
      121 atcaaatagg aggaaaagta gggatgtgta aaccgaatta tggcggcatt gtcttgttgc
      181 ccttactttt ggcatcttgc atcggcggca atttcggcgt gcagcctgtt gtcgaatcaa
      241 cgccgaccgc gtaccccgtc actttcaagt ctaaggacgt tcccacttcg ccccctgcca
      301 aaccttctat agaaaccacg ccggtcaatc aacctgccgt cggtgcggca atgcggctgc
      361 caaggcggaa tatcgcagct tttgataaaa atggtaatga aattcccgat agtaagcagg
      421 cagaggagta tctgccgctc aaagaggagg atatcctgtt tttagacggt acgccgaaag
      481 aacaggctga caaacttaaa aaggaaatca acggacggta tcctaatgta acaatctaca
      541 cgtccgattt aaaagatgct gtgtataaat atgaacatgt ccgggccgga tatgtttata
      601 ctagatttgg aacagatgaa atcgaacaga actcaggtgg taagcaggtt acccaccgct
      661 taggttatga tggttttgta tattattctg gagaacgtcc ttcccaatct ttaccgagcg
      721 cgggaacggt gaaatattcc ggaaactggc aatatatgac cgatgtcaaa cgtcatcgag
      781 caggtaaggc ggttggcatt gacaatttgg gttatatcac attttatggt aacgatgttg
      841 gtgcaacttc ttatgcggct aaggatgtcg acgaaaggga aaaacatcct gctaaatata
      901 cggttgattt cgataagaaa actttgacag gtcaattaat taaaaatcag tatgtgcaaa
      961 agaaaaccga tgaaaagaaa ccactgacca tttacaacat tactgcaaaa ttggacggca
     1021 accgctttac cggcagtgcc aaggtcaatc ctgatttagc gaaaaaccct gccggtaatg
     1081 agcgtttgtt tttccatgcc gatgccgatc agcggcttga gggcggtttt ttcggcgata
     1141 acggagaaga gcttgccgga cggtttatca gcaacgacaa cagcgtattc ggcgtattcg
     1201 caggcaaaaa aacagagaca gcaaacgcag cagatacaaa acctgccctg ccgtctggaa
     1261 aacacaccaa aatcttggat tctctaaaaa tttccgttga cgaggcgact gatggccatg
     1321 cccgtaagtt tgccatttcc tctatgcccg attttggtca tcccgacaaa cttcttgtcg
     1381 aagggcgtga aattcctttg gtaaacaaag aacaaatcat caagcttgcc gacggcagga
     1441 aaatgaccgt cagtgcttgt tgcgattttc tgacctatgt gaaactcgga cggataaaaa
     1501 ccgaccgccc cgccgccaaa ccaaaggcac aggacgaaga ttccgaagat gaaattggtg
     1561 aaagcgaaga aaacgaagac gaaatcagcg atgaagaagg cacggaagat gaagtcgtag
     1621 aagatgaagg cagcgaagaa gacgaagttt ccgaaggtga taacggtgaa aacgaagaag
     1681 aaatcgccga agaagaaacc gaagaagaag ttgatgaagc cgaagaggag aaagttgaag
     1741 aacccgaaga agaattgccg gcagaagaag gcaacggcgg ttcaggcagc atcctgccca
     1801 ctccggaagc ccctaaaggc agggacatcg accttttcct gaaaggtatc cgcacggcgg
     1861 aagccgacat tccaaaaact ggaaaagcac actataccgg cacttgggaa gcgcgtatcg
     1921 gcgtaccaga taagaaagac gatcagcctg gcactacgtt cattcaaaag gatagctatg
     1981 cgaatcaagg ggcaaaagca gaatttgacg ttgatttcgg cgcgaagtcg ctttcaggta
     2041 agttgacaga aaaaaatgat acacaccccg ctgtttatat tgaaaacggt gtgattgatg
     2101 gcaacggttt ccacgcgaca gcacgcactc gggataacgg tattgacctt tctgggcagg
     2161 gttcgaccag cccgcagagc ttcaaagcca acaatcttct tgtaacaggc ggcttttatg
     2221 gaccgcaggc ggcggaattg ggcggtaata ttatcgacag cgaccggaaa ttcggcgcgg
     2281 tattcggtgc gaagaaagat aataaagagg tggaaaaatg aataagaaac acggttttca
     2341 gcttaccctg actgccttgg ctgttgccgc cgccttcccg tcatatgcgg caaaccctga
     2401 aacggcggca cctgatgcgg cgcagaccca atccctgaaa gaggttaccg tccgtgccgc
     2461 caaagtggga cggcgatcga aagaggcgac cggtttgggc aaaatcgtca aaacgtcgga
     2521 aacgttgaac aaagaacagg tactcggtat ccgcgacctg acgcgctacg atccgggcgt
     2581 ggcggttgtc gaacagggca acggcgcgag cggcggctac tcgatacgcg gcgtggataa
     2641 aaaccgtgtg gcggtttcgg ttgacggcgt tgcccaaata caggcgttta ccgtgcaggg
     2701 atcgttgagc ggatacggcg gacgcggcgg cagcggtgca atcaacgaaa tcgaatatga
     2761 aaacatcagc acggtggaaa tcgacaaagg tgccggttcg tccgatcacg gcagcggcgc
     2821 actcggcggc gcggtcgcct tccgcaccaa agaggcggca gacctgattt cagacggcaa
     2881 aagctggggg atacaggcaa aaactgccta cggcagtaaa aaccgccaat ttatgaagtc
     2941 gctcggcgcg ggtttcagca aagatggttg ggaagggctg ttaatccgaa ccgaacgcca
     3001 agggcgggaa acgcgcccgc acggcgatat tgcggatggg gtggcatacg gcataaaccg
     3061 tttggacgcg ttccgccaga cacacgatat tcaaagccaa gataaaacag ggcaattttt
     3121 cttagtagag ggcgagaata cactcaagcc cgtggcaaaa ttggcgggct acgggatata
     3181 tttgaaccgc cagcttaacc gctgggtaaa agaacgtatt gaaaaaaatc agcctttaag
     3241 tgctgaagaa gaagcgatgg tgcgggaggc gcaggcgcgc cacgaaaacc tgtccgccca
     3301 agcttacacg ggcggcggca ggatattgcc cgatccgatg gattaccgca gcggctcttg
     3361 gcttgccaag ctgggctacc gcttcggcgg caggcattat gtcggcggcg tgtttgagga
     3421 taccaaacag cgttacgata tccgcgatat gacggaaaaa cagtattacg gtacggacga
     3481 ggcggacaag tttagagaca agagcggggt gtacgacggc gacgatttcc gcgacggctt
     3541 gtattttgtg ccgaatatag aagagtggaa gggcgataaa aagttggtca ggggcatagg
     3601 tttgaaatat tcccgcacca aatttattga tgaacatcac cgccgccgcc gtatgggttt
     3661 gctgtaccgt tatgaaaacg aagcgtattc tgacaactgg gcggataagg cggtgttgtc
     3721 gtttgacaaa cagggcgtgg caaccgacaa caacacgctg aagctgaatt gcgccgtgta
     3781 tcctgctgtg gacaaatcct gccgcgcgtc ggcggacaaa ccgtattcct acgacagcag
     3841 cgaccgtttc cactaccgcg aacagcacaa tgttttgaat gcctcgtttg agaaatcgct
     3901 gaaaaacaaa tggacgaaac accatctgac tttgggcttc ggttacgatg cttccaacgc
     3961 gatttcccgc cctgaacagc tttcccacaa tgcggcaagg atttcggaat ccacgggatt
     4021 cgatgaaaag aatcaagata agtaccgttt gggtaagccc gaagtcgtcg aagggtcggt
     4081 ctgcggctac atcgaaaccc tgcgttcccg caaatgcgtg ccaagaaaaa tcaacggcag
     4141 caatatccac atttctttga acgaccgttt ttcaatcggc aaatattttg atttcagctt
     4201 gggtggcagg tacgaccgga aaaacttcac cacgtcggaa gaactcgtcc gcagcggacg
     4261 gtatgttgac cgttcgtgga acagcggcat cgtgttcaaa ccgaaccggc atttttcttt
     4321 gtcttaccgc gcctccagcg gcttcagaac gccctcattc caagaacttt tcgggataga
     4381 catttatcac gattatccga aaggctggca gcgtcccgcc ctgaaatcgg aaaaggcagc
     4441 caaccgcgaa atcggtttgc agtggaaggg cgatttcggc tttttggaaa tcagcagctt
     4501 ccgcaaccgt tataccgata tgattgccgt tgccgatcac aaaaccaaat tgccgaatca
     4561 ggcaggacaa ttgacagaga ttgatatacg cgattattac aatgcccaaa atatgtcgct
     4621 ccaaggcgtt aatatattgg gaaaaatcga ctggaacggt gtgtacggca aactgcccga
     4681 aggtttgtac accacattgg catacaaccg catcaaaccg aaatcggtat ccaaccggcc
     4741 ggacttgtcc ctccgcagct atgctttgga tgcggtacag ccgtcgcgtt atgttttggg
     4801 gttcggatac gaccagccag aggggaaatg gggcgcaaac attatgctga cctattccaa
     4861 agggaaaaac cctgacgagc ttgcttatct ggcaggcgat caaaaacgat attcgacaaa
     4921 aagagcgtcg tcttcttggt cgacggcaga cgtttccgcc tatctgaatc tgaaaaaacg
     4981 gctgaccttg agggcggcta tctacaatat cggcaactac cgctacgtta cttgggaatc
     5041 cttgcgccag actgcggaaa gcacggcaaa ccggcacggc ggcgacagca actatggaag
     5101 gtatgccgca ccgggcagga acttcagcct cgcgctcgaa atgaagtttt aaaggaaata
     5161 ccgtctgaaa gcttgatctg caccccaaaa gtcggactaa accgccaact gattaaggtg
     5221 caggtttttt tgattcgata taaacaagat ttccgccgtc attcccgcgc aggcgggaat
     5281 ctagacattc aatgctaagg caatttatcg g
//
LOCUS       DBBZXW010000121         5180 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.121, whole genome shotgun sequence.
ACCESSION   DBBZXW010000121 DBBZXW010000000
VERSION     DBBZXW010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5180
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.121"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(32..448)
                     /gene="dksA"
                     /locus_tag="ACJJD2_001881"
     CDS             complement(32..448)
                     /gene="dksA"
                     /locus_tag="ACJJD2_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HGG7580358.1"
                     /translation="MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(595..1404)
                     /gene="proC"
                     /locus_tag="ACJJD2_001882"
     CDS             complement(595..1404)
                     /gene="proC"
                     /locus_tag="ACJJD2_001882"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HGG7580359.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRE
                     RLEKELGVETSATLPELHSDDVLILAVKPQDMEAACKNICTNGALVLSVAAGLSVGTL
                     SRYLGGSRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDE
                     AQMHSITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVTLAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1435..1843)
                     /locus_tag="ACJJD2_001883"
                     /pseudo
     CDS             complement(1435..1843)
                     /locus_tag="ACJJD2_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
     gene            complement(1843..2529)
                     /locus_tag="ACJJD2_001884"
     CDS             complement(1843..2529)
                     /locus_tag="ACJJD2_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HGG7580360.1"
                     /translation="MTVLQERYCEVSDRIGKLVLQAGRKPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSEQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVALAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2649..3692
                     /gene="pilT"
                     /locus_tag="ACJJD2_001885"
     CDS             2649..3692
                     /gene="pilT"
                     /locus_tag="ACJJD2_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HGG7580361.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNIGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDIILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3855..5081
                     /locus_tag="ACJJD2_001886"
     CDS             3855..5081
                     /locus_tag="ACJJD2_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HGG7580362.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNVSDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
BASE COUNT         1287 a         1610 c         1168 g         1115 t
ORIGIN      
        1 ggggattcat acggcatttt gtttgccgcc atcagtcggc aaactgtttt ttcatcctct
       61 ctcggcgttc ttgggactca acagataaag tggctgtcgg gcgtgccagc agccgcttca
      121 gaccgatagg ctctcccgta tcggcacaga atccataatc cccttcatca atattgcgga
      181 tggtcgcctg tattttactg agaagttttc gttcccgatc gcgggtacgg agttccaatg
      241 cgtactcttc ttcctgtgtg gcacggtcgg caggatcggg ggctgattcg tgttcttgga
      301 gatgccctgt cgtagcggaa gcattttcga tgagttcgtc ttgcattttt accagcaatt
      361 cgcggaaaaa agccaaatgg tcgtcattca tataatcgtc ttccggcccg ctccaattca
      421 aaatatcttg ttctgtcagc tttgccataa tgtatatcct ctcggttcac cgaaaaaaac
      481 aaagcaccac aaagtggctt tattcctttg atttttataa ggcttattgc ctaaggcgtt
      541 tttgaaaacg cgcatcataa cacgttttgg attggttttt ttattttctt tacattattg
      601 atattgccgt tccatttcct gcgaacggcg cacacaggca caaacgccct cgcttatggc
      661 ttcggcgaca cgatgccgcc tgaaagcttc cacggcttcg tgggttgtcc cgccttttga
      721 cgttacattt ttttgaagct tctcgaaatc ttcacccgtc tgctcggcaa gggtaaccgc
      781 tcctttaaac gttgccagac tgagcgcgcg tgcttctgcc atatcaaacc cttgtcggat
      841 ggcggcattt tgcaatgcgt ccagcagata aaacacataa gccggtccgc tgccgctgat
      901 accggtaatg ctgtgcattt gcgcttcatc ttccaaccaa acggtcaaac cgactgattt
      961 catgattcga tcggcaatcc tgcggtctgt ttccgatact tccgcttcgg catacatacc
     1021 ggatacgccc agtcctattt tcccgggcgt attcggcata acccggacaa tgcggcggct
     1081 tcccccgagg taacggctga gcgtaccgac tgacaatccg gctgcgacag aaagcaccaa
     1141 tgcgccgttg gtgcagatat ttttgcacgc ggcttccata tcctgcggtt tgacggcaag
     1201 gattaaaaca tcgtcggaat gaagctccgg cagggttgcc gaagtttcga cccccaactc
     1261 tttttccaaa cgttcgcgtt tttccgcacc ccgattggct atatagatgc ggtaaccgcc
     1321 ttgtttgacc aatccgcccg caacggcagc cgccatattg ccgccgccga gaaaataaac
     1381 attcattatt tctaccctat tcaaaattac ctgactaaat tcattcccaa ttttttacca
     1441 tcggacgcgc tcggacagac cgttgcgccg caacccctgc ttttccaagc agtcaaatcc
     1501 tccctgtttg aacgtctcaa tcaaaggttt gccgtcacgc gtacgccaat ccagcccgca
     1561 ggcttcaaac ttccctattt tcctgtaaaa gtaagattgt tgtgcggatt catattcgtt
     1621 tgccctgacg gaacgattgc cgtctgaaag cggtatctcg tagtcctcta aagacggcgg
     1681 actctcgccg ccaatatccc aaaaatcgat ggcagccggt tttctcggct tacaccagcc
     1741 ggacagggac gaacactcaa taccaacccg ccaaccggca gcctgcaacc gtaaatgcaa
     1801 gcaacgcagc cattgccgta tattttattg cccgaatttc catcagcccc ttttcccgaa
     1861 aatcgcgctg ccgatacgga cgtgtgtcgc accgcactca atggcggcag gcatatcgtc
     1921 cgacatcccc atagacagca cgtctgcctt aacgccagcc gcattgaggt cggcaagcag
     1981 tttccgcatc gtttgaaatt gcaccttcaa ctccgtttca ctgctgttgg ctttggcaac
     2041 acacatcagt ccgcgtacga cgatattcgg cagcttcgcc acttccacag caagcgcgac
     2101 tgcttcttcg ggcgcgacac cgtgcttcac cgcctcgccc gcaatattca cctcgataca
     2161 cacctgcaag ggcggcattg aggaaggacg ctgttcgctc aaccggacag cggttttcag
     2221 acggcatacg gtatgcaccc aatgcgcgcg ttcggcgaca aatttggttt tattggactg
     2281 cacatcgccg atgacgtgcc acacgatgtc ggtcaaatcc gccaactctt ccgttttgcc
     2341 gtaccactcc tgaatatagt tctcgccgaa atcacgctgt ccggcggcgt aaacttcgcg
     2401 gatgccgtct gaagggaaag tcttaccgac ggcaatcagg ctgacggaat gcggcttcct
     2461 tcccgcctgc agaaccaatt ttccgatacg gtcggacacc tcacaataac gttcttgcaa
     2521 caccgtcata gattatcccc taattaaaaa tgattaaaca gttgaaaccc ctccagtcag
     2581 ggcggtacaa tcaaggttgt tagaaccatt ccaaccaatc gaaacattat actaaacaga
     2641 gccgcattat gcagattacc gacttactcg ccttcggcgc taaaaacaaa gcatccgacc
     2701 ttcacctgag ttcgggcata tcccctatga ttcgggttca cggcgatatg cggcgcatca
     2761 accttcccga aatgagcgcg gaagaggtcg gtaatatggt aacttcggtg atgaacgacc
     2821 accagcggaa aatctaccag caaaacttgg aagtcgactt ctcgttcgaa ctgcccaacg
     2881 tcgcccgatt ccgcgtcaac gccttcaaca tcggccgcgg tcccgccgcc gtattccgca
     2941 ccattcccag caccgtctta tcgctggaag aattgaaagc cccgagcatt ttccaaaaaa
     3001 tcgcagaatc gccgcgcggc atggttttgg ttaccggccc taccggttcg ggcaaatcga
     3061 ccacgcttgc cgcaatgatc aactacatca acgaaaccca gccggcacac atcctgacca
     3121 tcgaagaccc gatcgaattc gtccaccaaa gcaaaaaatc cctgattaac cagcgcgagc
     3181 tgcaccagca caccctcagc ttcgccaacg cgctgcgttc cgcattgcgc gaagaccccg
     3241 acattatcct tgtcggcgag atgcgcgacc cagaaaccat cggcttggcg ctgaccgccg
     3301 ccgaaaccgg acacttggtt ttcggcacgc tgcacacgac cggcgcagca aaaaccgtcg
     3361 accgtatcgt ggacgtattc ccagcgggag aaaaagaaat ggtgcgctct atgctgtccg
     3421 aatcgctgac cgccgtcatc tcccaaaacc tgctgaaaac gcacgacggc aacggccgtg
     3481 tcgcctcgca cgaaatcctg attgccaacc ccgccgtccg caacctcatc cgcgaaaaca
     3541 aaatcacgca gattaactcc gtcctacaaa ccgggcaggc gagcggtatg cagacaatgg
     3601 accaatcgct gcaatcgctg gtgcgccaag ggctgatcgc accggaagtc gcacgcagac
     3661 gcgcgcaaaa cagcgaaagt atgagtttct gacacacaac cgccttccgg ccataccgac
     3721 gggaaaacaa ggcgcaaaca cgcggggcgg gacgcagcat cccgcccggc tacctttccg
     3781 aacaagaagc gtccgccttc ctgttgaaac ctgccgccgc aaactgcaag gcttaaaccg
     3841 aaaagaagct aacgatgaat accgataacc tgcacgacat cttggacgaa atggttcaag
     3901 tgtattctca aaaaaaacaa agccgatccg aaaccccggc cgaaatcggc gcacacttcc
     3961 acccgctgct cgaccgcctg tgcgaaaccg cagaagcaca aaacgtgtcc gacatcctta
     4021 tcagcaaagg attcccgccc tcgttgaaaa tcaacagcgc attaaccccg cagccgcaaa
     4081 aggcgctgac gggcgaggaa accgccgcca tcgccgcatc gacgatgaac gccgaacaat
     4141 cggaaatatt ccggcgcgac ggcgaaatca actactccgt ccagtcgcgc agcggcacgc
     4201 gctaccgcgc caacgcctac cacagccaag gcagcgcagg tttggttttg cggcgcatca
     4261 accacgtcat cccgcaaatg caggaattgg gcctgcccga aaaactcaaa gacctcgccg
     4321 tcgcaccgcg cgggctgctg attatcgtcg ggcctaccgg ttcgggcaaa tccaccacga
     4381 tggcgactat gctcgaacac cgcaacaaaa ccctgcccag ccatatcgtt accatcgaag
     4441 acccgattga gtttatctac aaaccgcgcc gctgcatctt tacccagcgc gaaatcggcg
     4501 tcgacaccat aaactggcag acggcggtac aaaacgctat gcgccaatcc cccgacgtgg
     4561 tctgcatcgg cgaagtccgc agcagggaaa gtatggaata cgcgatgcag ctcgcccaaa
     4621 ccggccacct gtgcattttt acgctccacg ccaacaccgc gccgcagtcg ctcgaacgca
     4681 tactcaactt ctaccccaaa gaacagcaca accaaatact gatcgacatc gccctcaacc
     4741 tgaccggcat catctgccaa cgcctcgccc tcaaacaaga caaaacgggc aggacggcgg
     4801 ttgtcgactt gctcatcaac acgcccgcca tccaagactt catcctgaag ggcgacctga
     4861 tgaacatcag taaaatcatg gaaaccgcca aaaccgacgg aatgcagacg atggatcaaa
     4921 accttttcga actgtaccgt cacggcatca tcagttacga agaagccctg cgccagtccg
     4981 tttccgccaa caacctgcga ttgcacatcc aactgcacaa agaaggcaaa acgcccgaac
     5041 tcctttacga cagggtcaac ggtctcaacc tcatttcctg atccgcaaaa cccaatgccg
     5101 tctgaaaacc gcatccccgt tttcagacgg catgatttta tccgccccat tcatgtgcta
     5161 cactttatag tggattaaat
//
LOCUS       DBBZXW010000122         5173 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.122, whole genome shotgun sequence.
ACCESSION   DBBZXW010000122 DBBZXW010000000
VERSION     DBBZXW010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5173
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.122"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(82..1338)
                     /locus_tag="ACJJD2_001887"
     CDS             complement(82..1338)
                     /locus_tag="ACJJD2_001887"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HGG7580363.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSVLPEENELQVERFLSEHPEFEPVNCAELLQSLKVDL
                     DTGKYLRLDSARHQTDGFFAAVLQRK"
     gene            complement(1686..2027)
                     /locus_tag="ACJJD2_001888"
     CDS             complement(1686..2027)
                     /locus_tag="ACJJD2_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580364.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2231..3088)
                     /locus_tag="ACJJD2_001889"
     CDS             complement(2231..3088)
                     /locus_tag="ACJJD2_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HGG7580365.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3149..3964)
                     /locus_tag="ACJJD2_001890"
     CDS             complement(3149..3964)
                     /locus_tag="ACJJD2_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HGG7580366.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            4028..4198
                     /locus_tag="ACJJD2_001891"
     CDS             4028..4198
                     /locus_tag="ACJJD2_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580367.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            4208..4993
                     /locus_tag="ACJJD2_001892"
     CDS             4208..4993
                     /locus_tag="ACJJD2_001892"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG7580368.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDIVAANPKVLAQMLKIISAHV"
     gene            complement(4974..>5173)
                     /locus_tag="ACJJD2_001893"
     CDS             complement(4974..>5173)
                     /locus_tag="ACJJD2_001893"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580369.1"
                     /translation="IVQGSPFNQIWVSIFGSFGHLAVSTFLPPLPVKMPSEISARYFR
                     RHTRPFSRIPGSGLKFKRVRK"
BASE COUNT         1159 a         1206 c         1415 g         1393 t
ORIGIN      
        1 tttttgttaa tccactataa ttgatgaaat gccgtctgaa cgctttgaaa agggttcgga
       61 cggcattttg ttcaaaccgg tttatttgcg ttgcaatacg gcggcgaaga agccgtcggt
      121 ttggtgtcgg gcggaatcga ggcgcaggta ttttccggta tccaaatcaa ccttcaggct
      181 ttgcagcagt tcggcgcagt tgacgggttc aaattcggga tgttcggaca ggaaacgttc
      241 gacttgcagc tcgttttctt ccggcaacac gctgcaggtg gcgtacacca agcggccttg
      301 cggtttcacc agtttggatg cggcatcgag gatgctgtgt tgctgttcca aaaggttggc
      361 cacggtctcg gcggattggc ggtatttgag gtcgggattg cggcgcagcg tgcctaagcc
      421 ggagcagggc gcatccacta aaacgcggtc ggctttgcct gccagtcggg caatacgggt
      481 atcgtgttca ctgctgatgc gttcagggtg gatgttggtc agtccggcac gggtcatgcg
      541 cggtttgagg ttggcaaggc gtttttcggc gatgtcgaag gcgtagattc tgcctttgtt
      601 cgccatttgc gcgccgatgg cgagggtttt gccgcctgcg ccggcacaga aatcgacaat
      661 gatttcgccg cgttttgcgc ccaccaataa agcaagcagc tggctgcctt cgtcttggac
      721 ttccagtgtg ccgtccaaaa acagctcgtg tttgttaagc gcgattttgt ttttcaggcg
      781 gatgccccaa ggcgaataag gcgttgcctc cgcatcggca ctttcggctt gcaacaatgg
      841 cagcacttta tcgcgtttgc ctttcaaggt attgacgcgg atgtcgagcg gcgcggcttg
      901 gttgatgctg cgtccgaagg cgaggatttc ttcttcgttc caatgctgtt gcagttgttc
      961 gaccagccat tgcggcaatt ctgcggcggt attcagaccg tctgaaaact cggttttgcg
     1021 ggctttcaaa ttgccgagga actctgtttc ttcttcatca agcaggtctt tgatttggct
     1081 gatgttggtg cttctgccga gaaccagtgc ggcgagtgcg gctttgcgcg gctgcgcgtg
     1141 aggacgacgc agggcggtac tgattttttg atagtggcgc agcgcggcaa aggcagtttc
     1201 ggcgatttcg tggcggtctt ggcggccgag ttttttgtgt tcgcggaaat aggcggagag
     1261 gacggcatcg gcaggctgtt tgaaagtcag catttcagcc aaaactttgg cggtatggtc
     1321 gagttgtgcg gcgttcataa tgtaatgggt tctcttactg tgggttattc ataatcaatc
     1381 taacgtcctt aaaataacaa tagcatcttt atcattactt agtattctat ccgcaataag
     1441 aaagatgtgt taaaagtgcg caatcgggat ttgtctaaat ttctccgtta actacaaagg
     1501 cagcctgaaa aaagttctat tttcaggtcg cttgaacagc atccgatata atcacatcag
     1561 cgatttcatt ttgtaatcac tccctaaaac atgaggaaaa aaacaaaatt tattttcttc
     1621 gttcagtata tctatcctaa atatgccatc actccattga gtttttaatt tgtatttcgc
     1681 tcttgttaaa tgtttttctg tttgccgatt tcttttgcta atgtaaaaaa tactctacca
     1741 ctctcattgg ttaaagtttt caagtattca tcaacatcag taacattaat aacaactgtt
     1801 tcatttgtat gtttattaaa ttctaaatca ataataatat tcccattaac caatatttca
     1861 tatatatctt cttcttcagg gagcatagac aaacaataag cacttgaagc tgaaaactct
     1921 tttttcagat actgaagaag aaaagtattt ttaattaaaa tattattaaa tttatctaat
     1981 gattgcttga cttctttagt tgtccaattt ttaacattat tcttcattgt attctacctg
     2041 gggtcgtagt tattaaatta ccatacttat ttgtttggat cgtcataata ttagttggca
     2101 tgttgttgtt atatttatca tatccaatat ccttattaac tcggatgact ctttcataaa
     2161 ttgtatggga aatgagattt ccatcactaa gcctctcaat agatatacgc gttaatgttg
     2221 ggaaagggtt tcagacggcc ttcataatgc gttcgatttc gtgccaaaag ccgtccggcc
     2281 gacattccaa aacggcaatc aagccttggt cgatacggcg gatttcggtt gcgttcaatg
     2341 tttcggtttc ggcgacacgc gcaggcgcga ggtaggccat acggtcgagc agatggtagc
     2401 ggacttcttg gcgtttaaac ccgtattccg cccaatcttg aatatagatg ccgcgccaac
     2461 cgtatggatt aagcggtggc tcaaaagcat ggaaaccgtg tggaaaaaat ccgatgccgc
     2521 gcacgatgga aacgggtttt acgtcaagcg gcagaccgtg ttgccgcaag gttcggatgc
     2581 cgtctgaagt gtgcggcaga ccgagttggg cggtcagttt ggcggctttt cccaacagcg
     2641 tgtctttggg gtcgagtccg cgcatgtctt cgagcctgcc cgtgccgccg ccgtaatatt
     2701 tgcaggtcag ctcgatatgg tagggcttgc cgttaagcct taccacaaaa tccgccgcgc
     2761 cttgcgtatt gccgtccgaa ccggaaaccg tgaggttgtg cgcgagcagt tcggcgtgtg
     2821 gcgcgttggc aaaccaaaat gccagcagtt cttcggcgta aatgccgagg cggtgtccga
     2881 acggggcgcg tcgggtgagg tgttccgtca gcggcgcggg atcggcatcc aatgccaaaa
     2941 gatagcggaa accgcgttcc cccaatagtt cgcgcacgcc caattcgcaa ccgctttgcc
     3001 acaaaggcgg cgcagtcagc agcgaggcga ggtcgcggac gggttggctg gtgagcttcc
     3061 accataatgc gtctagggcg taattcatgc ttatccgaat atcagtcatg ccgtctgaaa
     3121 agctggaaat gttttcagac ggccttaatc agtctttttt atggatacga tggctgacgg
     3181 tattgaaaaa accgcgcagg atatcgatgt cttcggtttg cgtgttggcg cgtccgaaca
     3241 ggctctgcat acggcgcatc agacgctcgc cgttgcggcg gttgaaaaag ccgatgtcgt
     3301 tcatcacgct ttccatgtgg gcgaccatgc ctttgatttg ctcgtgggtc gcagcgtggt
     3361 cttcttgttg aagatgggtc atgggcgaac cggtttggct gaagatttcg tagcacacga
     3421 cctgcacggc ttgggcgagg ttgagcgaga aatagtcggg attgccgttg atggtcatca
     3481 gtcggttgca ggcttggact tcttcgatgc tcaagccgaa agtctcgttg ccgaaaacca
     3541 gtgccacttt ctcgcctcgg tttgcggtct gcagtaattc ggataccaaa tcgcgcgggg
     3601 tttgcagcgg cgcagtaatt tcgcggcggc ggctggtcag ggcgcaggcg atggtggtgt
     3661 cggcaagggc ttcgtccaaa gaagcggcaa tggtggcatt ttccaaaacg tctgccgcgc
     3721 cggaagcgag gatgaagctt tcttccggta atttaaacga ttgaggatgc tccgggtcaa
     3781 acacgggcgg gttttccgtc atcggcgttg ccatcagatt tggggcgacg atggtcagtt
     3841 tgtgcagacc cattgttttc atcgcgcgcg cggcagagcc gatgttggcg ggatggctgg
     3901 tgcgcgtgag gatgatgcgg atgttgtcca gataagcggg cagggcgggt ttgagagtag
     3961 tcatgttcgg ttttcggtcg gaatggaata gggtataatg cgccgtcttt ttcgttcgga
     4021 cggtcaaatg ccgtctgaaa tgttctttaa caacgtcgga aatttaacgt tgcgcctgaa
     4081 gcagacacgc gtcgggcggt attttacccg atttggcagg atttacccca accaaataaa
     4141 ctccgatttt gccgctccga aggactgcgc gtccgaaccg gcggtatgcc acccttaagg
     4201 aaatctgatg aatccgtttt tgaatacagc ctttaaagcc gcccgccgtg ccggtcagat
     4261 gatgatacgc gccgcgggca atctcgatgc cgtcaaaacc gacagcaaag cattcaacga
     4321 ttttgtttcc gatgttgacc gcaattccga aatcatcctg gttgaggctt tgaaagaagc
     4381 ctatccgcac cacaaaatca cttgcgaaga aagcggctcc cacggtaaag ccgcagccga
     4441 atacgaatgg attatcgatc cgctcgacgg cacgaccaac ttccttcacg gccatcccca
     4501 atacgccatc tctatggcac tcctgcacaa aggcgtgttg caagaagctt tggtgtacgc
     4561 ccccgaacgc aacgacgttt acatggcttc gcgcggcaaa ggcgcgttgc tcaatgaccg
     4621 ccgcatccgc gtttccaacc gcatcgaatt gaaccgctgc ctgatcggta ccggctttcc
     4681 tgttgtcgat caaagcatga tggacaagta tctggcgatt ttgaaagatt tcttggcaaa
     4741 aaccgccggc ggccgtcgtg aaggcgcggc ttctttggat ttgtgtgctg tggcgactgg
     4801 tcgttttgac ggctttttcg agttcaacct caaaccttgg gatattgccg caggcgcatt
     4861 gattgttcag gaagcgggcg gtatcgtaac cgatatgacg ggtgaagacg gctggctgga
     4921 aagcggcgat attgttgccg ccaatcccaa agtgctggcg caaatgttaa aaatcatttc
     4981 cgcacacgtt taaatttcag cccgctcccg ggaatgcggg aaaacgggcg ggtatgccgt
     5041 ctgaagtatc gcgccgatat ttcagacggc atttttactg gcagcggggg caggaaggtg
     5101 gaaacggcta aatgcccgaa actgccgaag atggaaaccc atatctgatt aaacggagaa
     5161 ccctgtacga ttt
//
LOCUS       DBBZXW010000123         5063 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.123, whole genome shotgun sequence.
ACCESSION   DBBZXW010000123 DBBZXW010000000
VERSION     DBBZXW010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5063
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.123"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(70..1407)
                     /locus_tag="ACJJD2_001894"
     CDS             complement(70..1407)
                     /locus_tag="ACJJD2_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG7580370.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTILVALPVQLAEFYIGRTGGKNAVDSFRALRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGSGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLGIL"
     gene            complement(1794..2858)
                     /locus_tag="ACJJD2_001895"
     CDS             complement(1794..2858)
                     /locus_tag="ACJJD2_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HGG7580371.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEDIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAGH
                     QCVANRFTINHIADKLLDAI"
     gene            complement(2859..3617)
                     /locus_tag="ACJJD2_001896"
     CDS             complement(2859..3617)
                     /locus_tag="ACJJD2_001896"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7580372.1"
                     /translation="MKKVSVLIVARNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKGSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(3692..3767)
                     /locus_tag="ACJJD2_001897"
     tRNA            complement(3692..3767)
                     /locus_tag="ACJJD2_001897"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3732..3734),aa:Ile,seq:cat)
     gene            complement(3821..4957)
                     /locus_tag="ACJJD2_001898"
     CDS             complement(3821..4957)
                     /locus_tag="ACJJD2_001898"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HGG7580373.1"
                     /translation="MDWHERFPELEAQLGAPIEDYAPPKHWTRKQLRSMGRVSYLCVD
                     AAEQALTDAGLLGDESITDGRMGVACGSSSGSTKDIGDVGELLLTGTSRNFSANTYVR
                     MMPHTAAANIGIFFGLKGRIIPTSSACSSGSQGIGYAYEAIKYGLTDMMLAGGGEEFF
                     SSEVYVFDSLYAASRRNGEPEKTPRPYDANRDGLVIGEGAGIFVLEELEHAKRRGAII
                     YAELVGYGANSDAYHISTPRPDAQGAILAFQTALQHAGLAPEDIGWINLHGTGTHHND
                     SMESRAVAAVFGNNTPCTSTKPQTGHTLGAAGAIEAAFAWGIADRQSNPEGKLPPQLW
                     DGQNDPNLPAINLTGSGSRWETEKRIAASSSFTFGGSNCVLIIG"
     gene            complement(4902..>5063)
                     /locus_tag="ACJJD2_001899"
     CDS             complement(4902..>5063)
                     /locus_tag="ACJJD2_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7580374.1"
                     /translation="IHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYSGLARTFPR
                     IGSATGCAD"
BASE COUNT         1273 a         1256 c         1311 g         1223 t
ORIGIN      
        1 aggctgaacc tgaagcaaaa atgccgtctg aaaggctttc agacggcatt tttgccgttt
       61 ggagggcttt taaaggatgc ccaaagaatt gatgaaaaca ataataatgg caatcggggc
      121 aaggtagcgc aaggtattca gccacagcag cagcactgcc cgtggtacgg tgctgcccga
      181 tccggcatct tttaacacag actgcttgtc ctgaatccag gcggtaaaga tggaaacact
      241 caaagcacca atcggcataa tgacggcgga aataacatag tcccacaaat caaaaatggt
      301 tttgccgaaa accttaaact caccccatac gccgaaagac agcgcggacg ggatgccgac
      361 aatgaaaata gccgtgccga taagccaagt gtgctttttg cgtttgcgct cgtcttggcg
      421 gatggttgag gcaatgaccg tttccaacat cgaaaatgcg gaagtcagcg tggcgaaaac
      481 gaccagaagc atgaataccg caaacaaaac cgtaccgaac ggcatcttca taaacactgc
      541 gggcaatacg ataaaaatca atcccggccc ctggctcggt tcaaaaccga aggcgaacac
      601 cgccggaaaa atcaccaggc cggcaagcag cgaaaccaag aggttcatcc acataatcgt
      661 atggccggaa cggaacatat cctgatcttt tcccaaatat gaagcgtagg taatcatggc
      721 ggaaacgccg atgctcaggg caaaaaacgc ctgtcccaaa gccgtaatca tcgtatcggc
      781 tttaaagtac gaccaattcg gtttgagcag gaaagacacg ccctccattg cacccggcag
      841 cgtcagcgaa cggattgcca gcgcaataaa gaggataaac agccccggca tcagataacg
      901 gtttgccttt tcaatgccgt ctgaaatccc gcctttgacc acccaaaccg taatcagcat
      961 aaacagtgcc tgataggaca gcgaacctgc cggattggaa atcgttgtgc cgaacagggc
     1021 ttcaaagtcc gctcctgcat ggattgcccc tgtaaaactg tggacgacat aattcaatac
     1081 ccatccgccg accacgctgt aaaacgacag caaaataaag caggcggcaa cgcccatgcg
     1141 cccgacccaa agccattgcg tgcccggacg cagagccctg aaggaatcga cggcattttt
     1201 accgcccgtg cgcccgatat aaaactcggc aagctggacg ggcagggcga ccaagatagt
     1261 aaatatcaaa aacagcagga aaaacaccgc gccgccgttg gtgcctgccg tataagggaa
     1321 tttccaaatc gcgcccaaac cgatggccga acctgccgca gcaaggacga aaccgatttt
     1381 ggacgaccaa gaagtatggt tactcataaa atttattaag aaatgtgaaa gtagtatagt
     1441 ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacagata gtacggaacc
     1501 gattcacttg gtgcttgagc accttagaga atcgttctct ttgagctaag gcgaggcaac
     1561 gctgtactgg tttttgttag tctactatac attgtaacaa agcacttgat gcggcagcac
     1621 aagccgggga agacgctgca aaactttgcc aataggctgc gtaatatcgg gggatattgg
     1681 gattttctta tttttaagga tggattcggg gtgtttcttt ccaatgaacg aatataattt
     1741 ggcggtttgt tgcatcaaag gctttcagac ggcatatgcc gtctgaaagc ggcttatatt
     1801 gcatccaata atttgtcggc gatatggttg atggtaaaac ggttggcgac gcattgatgc
     1861 cctgccgttg ccagtgcgtt ttttgcttcg gggtttaaga cgaggcgttc gatttcatcc
     1921 gccaaagatt caggtgtcag cctgtccagc agaatccccg attgatgatg ttcgataatt
     1981 tccttttgcg cgcccaaagt attggaaatc actgccgttc ggcagtacat cgcctcgcat
     2041 aatgacaaac cgaatgcctc cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg
     2101 taaaacgaag caatgtcttc ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa
     2161 gcagatacgt cccgcttcag gcggcacata taatccggat gtccgtgccc tgccaatttg
     2221 agtctgattt gaggatattt ccgatgcagt atcacacagg cttcaatcag gttttccaat
     2281 cctttttccg gactgatcct gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt
     2341 tcttgagagg gagggaaacg gccggtatcg ataccgttat gaacaatccg gtatttttct
     2401 ttaaagggat tgtcggcggt ttgcacatcg taaaccagac gggaaacgca aataaagcgg
     2461 tctgtgtttt tctgtatcag gcggtgataa aaatcggttt tgttggcgac gacattgtgt
     2521 ttgacaaata tcaggcgcac cccggtcagt tttttcaaaa gtatggataa ggcggcaatt
     2581 ttgccggtgt gtatcatcag gtgggaaatg cggtttttcc gaataaagcg ggtaagcgcg
     2641 cagagcgaaa acagcccgtt gagcgtgtga aggcgtgtcg tgaaaacgga agaaacttcg
     2701 gaaaagcgtc tgtgcatcaa ctcattattt ttattgacgg cggtaaacat cgtgcagccc
     2761 cgcagtccca atgcttttga aacatcatag acatattgtt cgcccccgcc ccaaatcttg
     2821 gccgatacga tatttaatat cctgaattct ttttccattt aaaattttcc gccggatttg
     2881 tacagataat atagtttgac atatttaatc attgtgtaat agctgtggtt gacggacata
     2941 atccaaccca tttttccatc gagaaaccct ttgttcagga tataaatttt gaaaaacccc
     3001 caaattgggc ggaggataat gtccctaacg aaacgcacgg gctttccctg ctctcggtat
     3061 ttctcggctg aaatggaagt atatttgttg aatttgttga aatattgttc ccagttgtcg
     3121 tacgtataat ggtacataaa atgtttcaga cggcgtttag ggtagggggt ctgtacggtt
     3181 tcgtgtactt tgccttgcac cgaactgcct ttcttcggca tcaaacggca tacgctgtcg
     3241 ggacgcatcg cgccgtgtgt ggcgggatgg ttggggaaaa ggttgcggcg ttcgacaaaa
     3301 taggcggcat aatcgccggt ttggacaatt tttgagattt catcagatag ttccggcgtg
     3361 cagcgttcgt ctgcatcaat caggaaaacc cattctccgc ctgcctgttc gatggcaaat
     3421 gttttttgcg ctccgaaatc cccgttcaaa tgccgttgga agacttttgc gcccaaaccc
     3481 tcggcaattt cggcagtatt gtcggtgctg tggtcatcga taacgataac ttctttatcg
     3541 aaacggcaac tttcaataca ttcccgaatg tggtttgctt catttctagc aacaatcaat
     3601 acgctgactt ttttcattat caaggtttct caaagcattt tggtttcaca gggcggcaaa
     3661 aaagcccaaa catacgtccg ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg
     3721 accaagggat tatgagtccc ctgctctaac ccctgagcta cagacccgtc aagagtaggc
     3781 gcgtattgta tagcatagcg gtgggattga caaacttatt tcatccgatg attaagacgc
     3841 agttgcttcc cccgaaggta aacgatgagc tggcggcaat gcgtttttcg gtttcccagc
     3901 ggctgccgct gccggtcagg ttgatggcgg gaaggttcgg atcgttctgc ccgtcccaaa
     3961 gctggggcgg aagttttcct tcgggattgc tttgccggtc ggcaatgccc cacgcgaacg
     4021 cggcttcgat tgcgcccgcc gcacccagcg tgtgtccggt ttgcggcttg gtggacgtgc
     4081 agggcgtatt gttgccgaaa accgctgcaa cggcacggct ttccatactg tcgttgtggt
     4141 gcgtcccggt gccgtgcaga ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt
     4201 gcaatgccgt ctgaaaggca aggattgcgc cttgcgcgtc ggggcggggc gtggaaatat
     4261 ggtaggcatc gctgttggct ccgtagccga cgagttcggc gtaaattatc gcaccgcgcc
     4321 gtttggcgtg ttccaattct tccagcacga aaatccccgc gccttcgccg atgaccagcc
     4381 cgtcgcggtt cgcgtcgtat gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg
     4441 cggcataaag cgagtcgaaa acatacactt cggacgagaa aaattcttcg cctccgcccg
     4501 ccagcatcat atcggtcaga ccgtatttga tggcttcgta ggcataacct atgccttggc
     4561 tgccggacga acacgcgctc gatgtcggga tgatgcgtcc tttcagtccg aaaaagatgc
     4621 cgatattggc ggcggcggtg tgcggcatca tacgcacata ggtgttggca ctgaagttgc
     4681 gcgacgtgcc ggtcagcaac aattcgccca catcgccgat gtctttggtg ctgccgctgg
     4741 aagagccgca ggcaacgccc atccgtccgt cggtaatgct ttcgtctccg agcaaaccgg
     4801 catccgtcaa agcctgctcc gccgcatcga cgcacaaata cgacacacgc cccatacttc
     4861 tgagctgctt gcgcgtccaa tgtttcggcg gcgcgtaatc ctcaatcggc gcacccagtt
     4921 gcgcttccaa ttcggggaaa cgttcgtgcc aatccactat attttcgcaa gacgcgtttt
     4981 gcctgattcc aaaagttctc aatgccgtta atgtggttct gacggtctgc aaattccttg
     5041 gaatggttga tgcggtaatg gat
//
LOCUS       DBBZXW010000124         5050 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.124, whole genome shotgun sequence.
ACCESSION   DBBZXW010000124 DBBZXW010000000
VERSION     DBBZXW010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.124"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(912..1157)
                     /locus_tag="ACJJD2_001900"
     CDS             complement(912..1157)
                     /locus_tag="ACJJD2_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580375.1"
                     /translation="MLKSIELNSHIRNRLAEYLKGRGMDFQTAMQEEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            1269..1697
                     /locus_tag="ACJJD2_001901"
     CDS             1269..1697
                     /locus_tag="ACJJD2_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HGG7580376.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            1709..2185
                     /locus_tag="ACJJD2_001902"
     CDS             1709..2185
                     /locus_tag="ACJJD2_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HGG7580377.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GKQAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(2535..3023)
                     /locus_tag="ACJJD2_001903"
     CDS             complement(2535..3023)
                     /locus_tag="ACJJD2_001903"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HGG7580378.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(3091..4146)
                     /gene="aroG"
                     /locus_tag="ACJJD2_001904"
     CDS             complement(3091..4146)
                     /gene="aroG"
                     /locus_tag="ACJJD2_001904"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HGG7580379.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            complement(4308..4535)
                     /locus_tag="ACJJD2_001905"
     CDS             complement(4308..4535)
                     /locus_tag="ACJJD2_001905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580380.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCPVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            4813..>5050
                     /locus_tag="ACJJD2_001906"
     CDS             4813..>5050
                     /locus_tag="ACJJD2_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580381.1"
                     /translation="MTTQMGASRDVSKSAKGWSVGIGLNVGKQLTDSVGLEFDPYYRH
                     KTIYKPREIVLDGDKTKMGRSKSNEYGFRVAATFY"
BASE COUNT         1262 a         1271 c         1192 g         1325 t
ORIGIN      
        1 tatatactac atcacactac atcgcaatga aaaatcagga aaaacaaaaa acctctccgc
       61 cgtcattccc gcgcaggcgg aaatctagaa ttttaatgcg gcaagaattt atcggaaaaa
      121 actgaagttt aaagacctag attcccgcct gcgcgggaat gacggtttag aaatcacctg
      181 aaacgagaaa aagaaccgaa accggacaag tcggattccc gcacgggcgg gaaggacgga
      241 atttcagatt gttgtttttg attttctgtt ttgtgggaat aacgggattt tggatgatgt
      301 gcatttatcg ggaaaactaa aaaccctccg ccgtcattcc cgtgaaagcg ggaatctaga
      361 atttcaatgc cgcaagaatt tatcggggat gtccggggtt taaaggtctg gattcccgcc
      421 tgcacgggaa tgacggttta gaaatcacct gaaacgagaa aaagaaccga aaccagataa
      481 gtcggattcc cgcacgggag ggaaggacgg gatttcaggt tactgttttt gattttctgt
      541 tttgtgggaa taacgggatt ttggatgatg tgcattttcg ggaaaactaa aaaccctccg
      601 ccgtcattcc cgcgaaagcg ggaatctaga attttaatgc ggcaaaaatt tatcggaaaa
      661 aaccgaagtt taaagaccta gattcccgcc tgcgcgggaa tgacggttta gaaatcaccc
      721 gaaacgagaa aaagaaccga aaccgaacaa gccggattac cgcctgcgcg ggaatgacgg
      781 ctcaaaagtt acgaaacgaa aaataaccga aaccaaacaa gtcggattcc cgcgcgggcg
      841 ggaatgacga taagcgtaat ttcaatctgc catattgtct tttcacttgc ctgaaaacag
      901 atttcagcca cctatccctg catccggcgg ctgatgtagt cggcaatcaa atcccgcttt
      961 tcccaaaaaa acttctgcat tttttgttcg gaatacagtt tgcggaccag agtgggcaaa
     1021 ccgctgtgga cgatggcggc gatttctttg ttgccttttt cttcctgcat tgccgtctga
     1081 aaatccatac ccctgccttt cagatattct gcaaggcggt tgcggatgtg ggaattgagt
     1141 tcgatggatt tgagcatttt gcctccgttt tgcggtaagg atttattcga tttgtttatc
     1201 cgcctgattt tatcacgttt cccaagcggt ttgcctgtac aataccgctt ttcggcaggg
     1261 tgtgggcgat gatgttttct tggttcaagc tgtttcactt gttttttgtc atttcgtggt
     1321 ttgcagggct gttttacctg ccgaggattt tcgtcaatat ggcgatgatt gatgtgccgc
     1381 gcggcaatcc cgagtatgtg cgtctgtcgg gcatggcggt gcggctgtac cgttttatgt
     1441 cgccgttggg cttcggcgcg gtcgtgttcg gcgcggcgat accgtttgcc gccggctggt
     1501 ggggcagcgg ctgggtacac gtcaaactgt gtttgggctt gatgctcttg gcttaccagt
     1561 tgtattgcgg cgtgctgctg cgccgttttc aggattacag caatgctttt tcacaccgct
     1621 ggtaccgcgt gttcaacgaa atccccgtgc tgctgatggt tgccgcgctg tatctggtcg
     1681 tgttcaaacc gttttgacgg agcatcttat gccgatagaa atcgaacgcc gttttttgat
     1741 tggaaacgac aactggcggc aatacgccga cgaaccgctg ctgttgaggc agggttatct
     1801 gtctgttgaa aaagaacgca ccgtccgtgt ccgcattgcc ggaaaacagg cgtggctgac
     1861 gctgaaaggc tatatttcgg aaatcagccg cagtgagttt gaatacgaaa tcccgcttgc
     1921 cgatgcggaa aagatgatgg aaacgatgtg cccgtttaaa atggaaaaat ggcgttatcc
     1981 ggtcagatgg ggcggcagcc tgtttgaaat cgatgttttt cttggcgata atgcgccttt
     2041 ggtcgtcgcg gaaatcgagt tgcccgacga gaatgccgat tttgaccgtc cggactggct
     2101 gggacgggaa atcactgccg acggtatgtt taccaatgcc tatttgagca ggcatccgtt
     2161 ctcaagctgg aaaaatgccg tctgaaacgg cttcagacgg cattctccga caaccatcgc
     2221 aaatccaaag acagcctcta tatccttatt tctgctttct ttgttccatt attcccaata
     2281 aatccccata acctaaaatc tcgtcattcc cgcgcaggcg ggaatccggt tctttaaact
     2341 tcggtttttt ccgataaatt gctttagctt ttcgtttccg gattcccgct tttgcgggaa
     2401 tgacgatgga agattgttgt tatttcggat aaattaccct aactttaaaa tcccggattc
     2461 ccatcttcgg gggaataaca atattttcta tttcagccca tcatttgcgg gggattttat
     2521 agagagttta tatttcaata tctcaaataa tgcacaaaag catagcgcgt gcctttgctg
     2581 ctgacacggc gttccgtccg ctctgcttct ttccaatgcg tccggtctat tgcggggaaa
     2641 aatgcatctc cttccacaga caaatccact tcggttatcc gcaaatcggt cgccaatggc
     2701 atcgcttgtc cgtatatctg cgcgccgccc ataatgacgg cttcttccgc gcctgcgcac
     2761 aatgccaatg ccgcctccaa acttgccgcc gtttccgcgc ctgccgcgca ataatccgcc
     2821 tgccggctga tgacgatgtt cctccgtccg ggcaggggtt tgacgggcag ggattcccac
     2881 gttttccgcc ccataatgac gggtttgccc aaggtatagg ctttgaaaaa tgcgaaatct
     2941 tcggggatgt gccaaggcat agcattgccc gccccgatgc acaggttttc cgcacacgcc
     3001 gcaattaggg ttattttgag catatttcct ccacaaaaat gccgtctgaa cgcttcagac
     3061 ggcattttat gacattccgt gtcaaaaatc tcaaccggcg cgcgccatac gttttttgtt
     3121 tgcacctgcc aacaatgcca acagttcttc agtcgcgccc caaccgatac acgcatcggt
     3181 aatgcttttg ccgtacactt ccggcttatc ctgtctgcct tcgaccaaat ggctttccac
     3241 catcacgccc ataatattgc tcccgtcctg ttccaattgg gcagcaatat cttgtgccac
     3301 ttccatctgc cgggtgtaat ccttgcggct gttggcgtgg ctgcaatcta tcatcagctt
     3361 atcggttacc cctgccgcac gcagttgttc cgccgcctcg ctgacgtgtc ccgcatcata
     3421 attcggctct tttccgccgc gcaaaatgac atgacagtcg ggattgccgc cggtatggac
     3481 aatggcggaa tgtccggcct tggttacaga caagaaatga tgcgaatggc tcgccgcacc
     3541 gattgcgtcg atggcaatct tcaaattgcc atccgtaccg tttttaaagc cgacggggca
     3601 ggacagcccg cttgccaatt cgcggtgaac ttggctttcg gtcgtccgcg caccgattgc
     3661 cccccaagaa atcaagtccg cataatattg cggcgtaatc atatccaaaa actcggtaga
     3721 ggcaggcata cccatattgt tcagcgacaa caacaggctg cgcgcctgac gcaaaccgaa
     3781 attgatatcg aacgtaccgt ccaaatgcgg gtcgttaatc aaacctttcc aacccaccgt
     3841 cgtcctcggc ttctcgaaat aaacgcgcat cacaatcaaa agctcgtttt catactgctt
     3901 gcggagtttc aacaaacgct ccgcatattc caacgccgct ttcggatcgt gaatcgaaca
     3961 cggcccgata ataaccaaca gccgcttgtc cctgccgtga accaaatcgg aaatttcctg
     4021 acgggtgcgg tgaaccaagc ccgaagcctc tttggaaatc ggcagctcgt aaagatgggc
     4081 aatcggcggc aacaactctt taacttcttt aatcttaata tcgtctgtgg ggtaatggtg
     4141 tgtcatcttg catctttcct gatggttttt tatacgcggc ttaggttaca tcgtttacct
     4201 tgcacaaaca agtgcaacat attactacaa agctatttta tttcaaaata actgatatat
     4261 cttttttcat agattttaaa tttcatattt ttaatatttt aggaatttta ttccaaagaa
     4321 aaagaaacag attgataaaa acaatacccg ccattcattc ggacaaaacc gcacggaaca
     4381 tccgttttcc cgtttccacg acaatccggt acaggacacc ccgctgccga ttccgcctgc
     4441 acatccggca aaatttcata cgcaaggaaa atgttgaaaa caaaaagaac taattgcttg
     4501 aaaaaagatt taattggaat gcgggtattt cccacacttt ctccatttat tcatcctcat
     4561 tataggaaga aaaacatgaa aaaaccctgc ttgcactctc acttgcagcc gtgtccgccg
     4621 ttacggtagc cgatattccc gagtctaacg gcaagggcaa agccatcatc ggcgataagg
     4681 aaaaacaccg ttaccaagca tgaaaacctt gctttgaaag tccatggcga aatccgccaa
     4741 gatttggggg acggatgatc cttgacccct tgggcggatg catatgcaga tttgcgcggc
     4801 aaaaccaaag tgatgacgac ccagatgggt gcttcccgcg atgtcagcaa aagcgccaaa
     4861 ggttggagtg tcggtatcgg tctgaatgta ggcaaacagt tgaccgacag cgtcggtctc
     4921 gagtttgatc catactaccg tcacaaaaca atctacaaac cccgtgagat tgtcttggac
     4981 ggtgacaaaa ccaaaatggg ccgctccaaa tccaacgagt acggcttccg cgtagccgca
     5041 acgttctata
//
LOCUS       DBBZXW010000125         4749 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.125, whole genome shotgun sequence.
ACCESSION   DBBZXW010000125 DBBZXW010000000
VERSION     DBBZXW010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.125"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..369
                     /locus_tag="ACJJD2_001907"
     CDS             <1..369
                     /locus_tag="ACJJD2_001907"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580382.1"
                     /translation="GYDLSFGIRNIIIFFVKGIYTEDDSKPAGKKRPLLNCTPKVGHL
                     TDFRGCSFLWQNIQMNSDLPSFNTIWQGTADHLSISDSLVRRWVTKYRLHGESGIKRR
                     KHTTKYSVEYKLEAIRLVTG"
     gene            373..486
                     /locus_tag="ACJJD2_001908"
     CDS             373..486
                     /locus_tag="ACJJD2_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7580383.1"
                     /translation="MSQKAAADQLNLPDCSILLQWLRLYHLNGINGLKPKP"
     gene            806..1063
                     /locus_tag="ACJJD2_001909"
                     /pseudo
     CDS             806..1063
                     /locus_tag="ACJJD2_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611698.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1116..1298)
                     /locus_tag="ACJJD2_001910"
     CDS             complement(1116..1298)
                     /locus_tag="ACJJD2_001910"
                     /inference="COORDINATES: protein motif:HMM:NF024728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7580384.1"
                     /translation="MKYTIFFSTSHHSNQTKATHRHTHVGSTAGQTTIRSGGDTTLKG
                     AQLIGIGIQADPQLQP"
     gene            complement(1449..2399)
                     /locus_tag="ACJJD2_001911"
     CDS             complement(1449..2399)
                     /locus_tag="ACJJD2_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HGG7580385.1"
                     /translation="MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSH
                     KVNDKLHCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKL
                     IAQYCQDRKHKLKAWKPPTKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQ
                     TTISNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFK
                     NARQFTAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVG
                     RLKNKGKHIKLILIAIMRKLAVIAFTILQNGQDFQVERYK"
     gene            complement(3025..4110)
                     /locus_tag="ACJJD2_001912"
     CDS             complement(3025..4110)
                     /locus_tag="ACJJD2_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HGG7580386.1"
                     /translation="MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLY
                     FCHIDGLDKRQFKAHELTEEQIMSAPLRDVIPEGAVLIVDEAHYTYPVRAAGRPVPPY
                     IQELTELRHHGHTVILMTQHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLD
                     NPAGVSGVEVASWKPPKEAFKYYKSASQHQKFKKKVPWAVWALIAIVGFVGWKSYGIF
                     KVYSKATDSRIEQEAQKESVVQTMTEQPASSEEMPLKNSDNLKPEDFVPTLPEKPESK
                     PIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYK
                     DEQQRTEQVEQSAKADKPQVLVMGGKP"
     gene            complement(4120..4410)
                     /locus_tag="ACJJD2_001913"
     CDS             complement(4120..4410)
                     /locus_tag="ACJJD2_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HGG7580387.1"
                     /translation="MPLLAGLIPLLGILLKMLIVRIILATGLTFVTYAGYLIALEKFK
                     DYTSNAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHAFKKLTFVFPG"
     gene            complement(4411..>4749)
                     /locus_tag="ACJJD2_001914"
     CDS             complement(4411..>4749)
                     /locus_tag="ACJJD2_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7580388.1"
                     /translation="RHRKERKEGEDGGLLCDYFPEILACQEMGKPSDGMFHDISIPQV
                     IDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYQASYEPLCVFAEKIRFAVLLAFIIMSA
                     FVVFGSLKGK"
BASE COUNT         1182 a         1038 c         1037 g         1492 t
ORIGIN      
        1 ggatacgacc ttagttttgg tatccgtaat atcatcattt ttttcgtcaa gggaatatac
       61 acggaggatg attcaaaacc ggcaggcaaa aaaagaccgc ttctgaactg caccccaaaa
      121 gttggacacc ttaccgactt tagggggtgc agttttttat ggcaaaatat tcagatgaat
      181 tccgacttgc cgtcgttcaa tactatttgg cagggaacag cagaccatct ttctatttcc
      241 gattcattgg tacgcagatg ggtgacaaaa tacagattac acggagagag tggcatcaaa
      301 cgtagaaagc atacgacaaa atattcggtc gaatacaaac ttgaggcaat ccgcctggtg
      361 acggggtagg gaatgtccca aaaagctgcc gcagaccaac tgaatttgcc cgactgctcc
      421 atcttgctgc aatggttgcg cctctaccat ttgaatggta ttaacggttt aaagcccaaa
      481 ccctaaaccc aaaggaagaa agcccgtgaa aaaacagcat ccgccggaaa cgaaaaagcc
      541 gactatctga aaaccaagga agaactgctt gcggaattgg cttgccttaa agcggaaatg
      601 gctgccctaa aaaagctcga tgccttaatc tatgggaaag aagtgcggta gaaagaacgc
      661 aactcgtcgc agggttaagg caatgccatc cgttgaactg ctgttggtga ttgtcggact
      721 gccacgcggc accttctatt accaattggt tgtccaatcg gcagaagaca aatatgccga
      781 tttgaaacgg catatccatg atatttatca aaagcagttg aaagacaacg gtctggttca
      841 gagtatgtcc cgcaagggaa actgcttgga caatgcggca atggaaagtt tcttcggaac
      901 gttgaaatcg gaatgtttcc atacgtgcaa atatgattcc gttaccgaat tggaagctgt
      961 actgcacgaa tatatccgtt actacaacaa cgatagaatc aagttgaaat taaaaggact
     1021 gagccctgtt cagtacagaa ttcagtccct gaaagccgct tgattaaact gtccaacttt
     1081 tgggggtcag ttaatatcgg ttccaccaat agtcgtcagg gttgtagttg ggggtctgcc
     1141 tgtatgccta tgccgataag ctgagcacct ttgagggtgg tatccccgcc gcttcggatg
     1201 gtggtttgtc cggccgtact gccgacatgg gtgtggcggt gggttgcttt tgtctgattg
     1261 ctgtggtggc ttgttgaaaa aaagatagtg tatttcacgg tcaaataact ttacatttct
     1321 tgaagttgca agaatgcgca ccccgacttt ttcgggatgt ttgtttcgtt ttgaatggat
     1381 ttgatgtttt aatttatact ttattttcaa taaattgaaa atcaccggcg aaagcccagt
     1441 ttaatttttt atttatatct ttccacttgg aaatcttggc cgttttgcaa aatcgtaaac
     1501 gctattaccg ccagtttccg catgatggca attaatatca attttatatg cttcccttta
     1561 tttttcagac gccctacaaa ttcagggaag gcattacaac gatatgcaac aagtgcaggc
     1621 atataaaggc ttttccttat ttccgaactt cctatttttg atattctgct ttttccgttc
     1681 acgcttgttc ctgattgaaa ttttctaggg tctaggccta gataagccgt gaactgtctt
     1741 gcatttttaa attcatgtct tttataggtt gatagcaata ctgctgtcgc ttgctcgcct
     1801 atgcctgtta ttgttttcag ccttttgcgt agattgttat aacttggatt gtctttgtag
     1861 aactggagta attgcttttt gactatctgt atttgtgctg tcaggtttga aatagttgtt
     1921 tgaatatggg atttgatata gtcgggtgct tcgtgttgtt tagctttttc tgttgcgcgt
     1981 tgctgtttca gatagtctaa atatcgggcg atttcctgta attgcttctg ttcttttgtc
     2041 ggcggtttcc atgcttttaa tttgtgcttt cggtcttggc aatattgggc tatcaacttt
     2101 gcgtcttgtg tatctgtttt tgatcgttgt agttctgcta tcgcatatcc ttttatcttt
     2161 cgtggattct ctacggtaat tgtatatctt gaataaagat attcggctaa tgcttcgtaa
     2221 tatgtgcctg ttgcttcgca cacgcaatgg agcttatcgt ttactttatg actttgtagc
     2281 caatttatta attgttcaaa tcctcctttg ttgttctgaa acttcttttg ataattttga
     2341 ccgtctacaa tcaaacagca atctattgtg agctttgaaa cgtctattcc taagtacatg
     2401 gtttaacctt attaattcgg gctttttgcc ctagatagtg ttcaaactta agatgtacga
     2461 aagcccacgc ttctatcttt cttacaagct gtacgctttg gccgtacttt cgaagtcgtg
     2521 ggctttactt ggtgtttcgt caaacgccaa gccctcaatg ggctgattta ctcattcagg
     2581 gcttgaagct tatcgccttt gccgtatctg attttattgg ggtcgcaggt tttggtaaag
     2641 gtttctgttg cgacccgaat gtctgatttt ttttgggcgt atctcagtct ggaatcactc
     2701 cgttcggggg tttccggtat tgaaaaacag ttcataaaaa aggaaaaggg ggtattcata
     2761 aagattgggt aaaaagcgcg cccaatcttt acaaagcttc ccccttttcc ttttttctgc
     2821 cctattttcc tgcacctaca acccccgaac gaagcgattc cagactgaga cactttaaaa
     2881 aaaacagcca ttctagcaat taaccccctt cactcagctc aagccatcct gaggggtagg
     2941 gattgaactt tctgctttac gactccgccg ccaattcctt caaacggttt tccgcgctct
     3001 tcagttgtcg tacatgagat tttgctacgg ctttccgccc attacgagaa cttgcggctt
     3061 gtccgctttc gcggactgtt ccacctgttc cgtcctttgc tgttcgtcct tataaggatt
     3121 gaaaggcaac ccgtttttca catattcttt acacattatc tttgttattt ctttcaaggg
     3181 tgttccttga tttgaatagc atgtgcaatc tgattttccg ccgtctatac atccggcgat
     3241 ttgctcaaag gtttttactt gtcggactgt gttataaata ggcttgcttt cgggcttttc
     3301 gggtaaagtc ggcacaaagt cttcaggttt caaattgtct gaatttttta aaggcatttc
     3361 ctctgatgat gcaggctgct ccgtcatcgt ctgcacaacg ctttcttttt gcgcttcctg
     3421 ctcaatccgg ctgtctgtgg ctttgctgta aactttaaaa atgccgtaac ttttccagcc
     3481 tacaaaccct acaatcgcaa tcaacgccca aaccgcccaa ggtacttttt tcttgaactt
     3541 ttggtgctgg cttgctgatt tatagtattt aaaggcttct ttcggcggtt tccaacttgc
     3601 gacttctacg ccgcttacgc ctgcgggatt gtccaacgag gttacgcatt tataccaata
     3661 atactgtttc attccgattg ccttgcgttc aaggtgtaca tgctttgaaa caaggttgcg
     3721 gacgaatata tcaagttggc tcgggtgctg cgtcatcaaa ataacggtat gcccgtgatg
     3781 gcggagttct gtcagttcct gaatataagg cggaacggga cggcctgccg cgcgtaccgg
     3841 ataagtgtag tgcgcttcgt caacaatcag cactgcgcct tccggtatga catcacgaag
     3901 cggggcggac atgatttgct cttccgtcag ttcgtgggct ttaaactgcc gtttatccaa
     3961 tccgtcgata tggcagaaat aaagcggtct gtctacctct gtgccgtctt ccaatttcat
     4021 tttgaacaat ccgtcttcgt tgttcaaaat catagagacg acgcgggagg ttttgcctgt
     4081 ccccatgttt cctgtaaaca gataaatcat gcttctacct catcctggaa agacaaacgt
     4141 cagttttttg aatgcgtgca taccaatgaa gaacgagaat gcgccgaaca ggtagcccaa
     4201 cccctgaccg aatcccgaaa ttaaaagaag gttcagtatg tcggaaggca tggaattgat
     4261 cgcatttgac gtgtagtctt tgaacttttc cagcgcgatg agatacccgg cataggttac
     4321 aaatgtcaga cctgttgcaa ggattattct gacaatcagc attttcagaa gtatgcctaa
     4381 aagtggaatc agaccggcaa gtaatggcat ttatttcccc ttcaacgaac cgaaaacgac
     4441 aaaagccgac ataatgataa aggcgagcag tacggcaaaa cggatttttt cggcaaacac
     4501 gcataacggc tcatagcttg cctgatattg cctaccgaaa acatgaaagg ttttcggctg
     4561 cggacatacg ccgttagacg gtaaaaagtt atgtgaagac catgttttat cgtctataac
     4621 ctgcggtatg cttatatcgt gaaacatgcc gtctgaaggt ttgcccatct cctgacaggc
     4681 taggatttcc ggaaaataat cgcacaaaag cccgccgtct tcgccttctt tcctttcttt
     4741 gcgatgcct
//
LOCUS       DBBZXW010000126         4688 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.126, whole genome shotgun sequence.
ACCESSION   DBBZXW010000126 DBBZXW010000000
VERSION     DBBZXW010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4688
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.126"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..401)
                     /locus_tag="ACJJD2_001915"
     CDS             complement(<1..401)
                     /locus_tag="ACJJD2_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HGG7580389.1"
                     /translation="MLCPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASLQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQA"
     gene            complement(437..550)
                     /gene="rrf"
                     /locus_tag="ACJJD2_001916"
     rRNA            complement(437..550)
                     /gene="rrf"
                     /locus_tag="ACJJD2_001916"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(647..3538)
                     /locus_tag="ACJJD2_001917"
     rRNA            complement(647..3538)
                     /locus_tag="ACJJD2_001917"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3947..4022)
                     /locus_tag="ACJJD2_001918"
     tRNA            complement(3947..4022)
                     /locus_tag="ACJJD2_001918"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3987..3989),aa:Ala,seq:tgc)
     gene            complement(4028..4104)
                     /locus_tag="ACJJD2_001919"
     tRNA            complement(4028..4104)
                     /locus_tag="ACJJD2_001919"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4068..4070),aa:Ile,seq:gat)
     gene            complement(4206..>4688)
                     /locus_tag="ACJJD2_001920"
     rRNA            complement(4206..>4688)
                     /locus_tag="ACJJD2_001920"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1022 a         1352 c         1017 g         1297 t
ORIGIN      
        1 gcctgatcct tcagcttcgc cagcaccgca gggccgatgc cctttacctt ggtcaaatcg
       61 tctacagact tgaacgcacc gttttgcgca cggtattccg caatggcctt cgccttcgcc
      121 gggcctatgc ctggcagcgc ctccaactcc tgcagcgaag ccgcattgat gtttaccgcc
      181 gcaagggaga aggcgcagga gaacagcata cagaacagca cgaacatttt cttcatggtt
      241 tttcctttaa gggttgcaaa caataaaccg catcttgcga cgataaaacg agtcattcta
      301 aaatgaatat cccaaagttt caagccgttc ctccgcaaac ccgaccggac gccgtacgga
      361 tgccgtcccg ccatccccga cattttttcc gggcaaagca aaaacccccg aataatcggg
      421 ggttttctga atgggtgttt ggcagtgacc tactttcgca tggaagaacc acactatcat
      481 cggcgctgag tcgtttcacg gtcctgttcg ggatgggaag gcgtgggacc aactcgctat
      541 ggccgccaaa cttaaactgt tacaaatcgg taaagcctta atcaatatat tcggtaatga
      601 ctgaatcagt cagtaagctt ttatctcttg aagttcttca aatgatagag tcaagcctca
      661 cgagcaatta gtatgggtta gcttcacgcg ttaccgcgct tccacacccc acctatcaac
      721 gtcctggtct cgaacgactc tttagtgcgg ttaaaccgca agggaagtct catcttcagg
      781 cgagtttcgc gcttagatgc tttcagcgct tatctcttcc gaacttagct acccggctat
      841 gcaactggcg ttacaaccgg tacaccagag gttcgtccac tccggtcctc tcgtactagg
      901 agcagccccc gtcaaacttc caacgcccac tgcagatagg gaccaaactg tctcacgacg
      961 ttttaaaccc agctcacgta ccactttaaa tggcgaacag ccataccctt gggaccgact
     1021 acagccccag gatgtgatga gccgacatcg aggtgccaaa ctccgccgtc gatatgaact
     1081 cttgggcgga atcagcctgt tatccccgga gtacctttta tccgttgagc gatggccctt
     1141 ccatacagaa ccaccggatc actatgtcct gctttcgcac ctgctcgact tgtcggtctc
     1201 gcagttaagc taccttttgc cattgcacta tcagtccgat ttccgaccgg acctaggtaa
     1261 ccttcgaact cctccgttac gctttgggag gagaccgccc cagtcaaact gcctaccatg
     1321 cacggtcccc gacccggatg acgggtctag gttagaacct caaagacacc agggtggtat
     1381 ttcaaggacg gctccacaga gactggcgtc tctgcttcaa agcctcccac ctatcctaca
     1441 caagtgactt caaagtccaa tgcaaagcta cagtaaaggt tcacggggtc tttccgtcta
     1501 gcagcgggta gattgcatct tcacaaccac ttcaacttcg ctgagtctca ggaggagaca
     1561 gtgtggccat cgttacgcca ttcgtgcggg tcggaactta cccgacaagg aatttcgcta
     1621 ccttaggacc gttatagtta cggccgccgt ttactggggc ttcgatccga tgctctcaca
     1681 tcttcaatta accttccagc accgggcagg cgtcacaccc tatacgtcca ctttcgtgtt
     1741 agcagagtgc tgtgttttta ataaacagtc gcagccacct attctctgcg accctccggg
     1801 gcttacggag caagtcctta accttagagg gcataccttc tcccgaagtt acggtatcaa
     1861 tttgccgagt tccttctcct gagttctctc aagcgcctta gaattctcat cctgcccacc
     1921 tgtgtcggtt tgcggtacgg ttcgattcaa actgaagctt agtggctttt cctggaagcg
     1981 tggtatcggt tacttcgtgt ccgtagacac tcgtcgtcac ttctcggtgt taagaagacc
     2041 cggatttgcc taagtcttcc acctaccggc ttaaacaagc tattccaaca gcttgccaac
     2101 ctaaccttct ccgtccccac atcgcatttg aatcaagtac aggaatatta acctgtttcc
     2161 catcgactac gcatttctgc ctcgccttag gggccgactc accctacgcc gatgaacgtt
     2221 gcgcaggaaa ccttgggctt tcggcgagcg ggcttttcac ccgctttatc gctactcatg
     2281 tcaacattcg cacttctgat acctccagca cactttacaa tgcaccttca tcggcctaca
     2341 gaacgctccc ctaccatgcc ggtaaaccgg catccgcagc ttcggttata gatttgagcc
     2401 ccgttacatc ttccgcgcag gacgactcga ccagtgagct attacgcttt ctttaaatga
     2461 tggctgcttc taagccaaca tcctggctgt ctgggccttc ccacttcgtt taccacttaa
     2521 tctatcattg gggaccttag ctggcggtct gggttgtttc cctcttgaca acggacgtta
     2581 gcacccgctg tctgtctccc gaggaaccac ttgatggtat tctgagtttg ccatgggttg
     2641 gtaagttgca ataaccccct agccataaca gtgctttacc cccatcagtg tcttgctcga
     2701 ggcactacct aaatagtttt cggggagaac cagctatctc cgagtttgtt tagcctttca
     2761 cccctatcca cagctcatcc ccgcattttg caacatgcgt gggttcggtc ctccagtacc
     2821 tgttacggca ccttcaacct ggccatggat agatcactcg gtttcgggtc tacacccagc
     2881 aactcatcgc cctattaaga ctcggtttcc ctacgcctcc cctattcggt taagctcgct
     2941 actgaatgta agtcgttgac ccattataca aaaggtacgc agtcacacct ctagggtgct
     3001 cccactgttt gtatgcatca ggtttcaggt tctgtttcac tcccctcccg gggttctttt
     3061 cgcctttccc tcacggtact ggttcactat cggtcgatga tgagtattta gccttggagg
     3121 atggtccccc catattcaga caggatttca cgtgtcccgc cctacttttc gtacgcttag
     3181 taccgctgtt gagatttcga atacgggact gtcacccact atggtcaagc ttcccagctt
     3241 gttcttctat ctcgacagtt attgcgtaca ggctcctccg cgttcgctcg ccactacttg
     3301 cggaatctcg gttgatttct tttcctccgg gtacttagat ggttcagttc tccgggttcg
     3361 cttctctaag tctatgtatt caacttagga tactgcacag aatgcagtgg gtttccccat
     3421 tcggacatcg cgggatcatt gctttattgc cagctccccc gcgcttttcg caggcttaca
     3481 cgtccttcgt cgcctatcat cgccaaggca tccacctgat gcacttattc acttgactct
     3541 atcatttcaa gaacttcttt gacttcgttt gcctacctgt tgactaagta aaagcaaact
     3601 tgaaattcct actttgataa agcttactgc tttgttgtgt cttaatcctg ccttttgtgt
     3661 ttcaggatta agtcgataca atcatcaccc aaatactgtg tttgttttct tttctcttgt
     3721 gagcgatttt ttatcctttg caaagaataa aaaatcaaaa caaacgcttt gtctttgttt
     3781 gttgatttcg gctttccaat ttgttaaaga tcgatgcgtt cgatattgct atctactgtg
     3841 caaatcaaaa cgagctgatt attatatcag cattttgttc ttggtcaagt gtgatgtcgc
     3901 cctgaatgga ttctgttcca ttcttccgtt ttgatttgta cagtattggt ggaggcaaac
     3961 gggatcgaac cgatgacccc ctgcttgcaa agcaggtgct ctaccaactg agctatgccc
     4021 ccgttattgg tgggtctggg aggacttgaa cctccgaccc cacgcttatc aagcgtgtgc
     4081 tctaaccagc tgagctacaa acccggattc tcttcttaag cgaatcttgc cttcactcaa
     4141 gcttcttccg catctttttc agtttaccga taagtgtgaa tgcctaaagc ctcttctttc
     4201 tctagaaagg aggtgatcca gccgcaggtt cccctacggc taccttgtta cgacttcacc
     4261 ccagtcatga agcataccgt ggtaagcgga ctccttgcgg ttatcctacc tacttctggt
     4321 atcccccact cccatggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgc
     4381 agtatgctga cctgcgatta ctagcgattc cgacttcatg cactcgagtt gcagagtgca
     4441 atccggacta cgatcggttt tgtgagattg gctccacctc gcggcttggc taccctctgt
     4501 accgaccatt gtatgacgtg tgaagccctg gtcataaggg ccatgaggac ttgacgtcat
     4561 ccccaccttc ctccggcttg tcaccggcag tctcattaga gtgcccaact gaatgatggc
     4621 aactaatgac aagggttgcg ctcgttgcgg gacttaaccc aacatctcac gacacgagct
     4681 gacgacag
//
LOCUS       DBBZXW010000127         4651 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.127, whole genome shotgun sequence.
ACCESSION   DBBZXW010000127 DBBZXW010000000
VERSION     DBBZXW010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.127"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            111..1052
                     /gene="miaA"
                     /locus_tag="ACJJD2_001921"
     CDS             111..1052
                     /gene="miaA"
                     /locus_tag="ACJJD2_001921"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HGG7580390.1"
                     /translation="MPTPKAFALLGPTACGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSHAERSFVPHHLIDIITPVQTYSAARFVEDCTRLIGEITARGKYPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1056..1775
                     /gene="tadA"
                     /locus_tag="ACJJD2_001922"
     CDS             1056..1775
                     /gene="tadA"
                     /locus_tag="ACJJD2_001922"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HGG7580391.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1780..2268
                     /locus_tag="ACJJD2_001923"
     CDS             1780..2268
                     /locus_tag="ACJJD2_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HGG7580392.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGMFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2334..3086
                     /gene="rlmB"
                     /locus_tag="ACJJD2_001924"
     CDS             2334..3086
                     /gene="rlmB"
                     /locus_tag="ACJJD2_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HGG7580393.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(3148..4539)
                     /locus_tag="ACJJD2_001925"
     CDS             complement(3148..4539)
                     /locus_tag="ACJJD2_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HGG7580394.1"
                     /translation="MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
BASE COUNT         1163 a         1490 c         1126 g          872 t
ORIGIN      
        1 aaaggcatac ggtaaacacg cccccttgcc gtcggcgtgc ttccgcaaac caaaatataa
       61 cgtcggcacg ctttccgcta taatccgtat ttttccaaac ctgaaacgtt atgccgaccc
      121 cgaaagcctt tgccctgctc gggccgaccg cctgcggcaa aaccgcgctc gccctcaaaa
      181 ttgccgaaac cttgcctgtc gaaatcatca gcctcgattc cgcgctggtt taccgcgata
      241 tggacatcgg cacggcgaaa ccgtctcatg ccgagcgttc ctttgtaccg caccacctta
      301 tcgacatcat tacgcctgtt cagacataca gtgccgcccg ttttgtcgaa gactgcacgc
      361 gtctgattgg cgaaatcacg gcgcgtggga aatatccgct gattgtcggc ggcacgatga
      421 tgtatttccg cgccctgacc caaggtttga acgatttgcc cgaagccgac gcctgcctgc
      481 gtgccgactt ggacgaacaa aaacaaatgt acggcttgga tttcctctac cgcaccctgc
      541 aaaaagtcga ccctgaaaca gcatgccgtc tgaaaccgaa cgacagccag cgtatcggac
      601 gcgctttgga agtttattat ttaaccggca aaccgatgag tacgcatctc ggcagcccaa
      661 cctcccatac gctccccttc gatttgcata ccgccgccct gattcccgaa aaccgcgccc
      721 gcctgcatga aaacatcgcc ctgcgtttcc acctgatgct tgaacagggc tttatcggcg
      781 aagtagaaaa cctgcgccgc ctctatccca gcctgaccgc cgactcccct gccatacgct
      841 gcgtcggcta ccgtcaggca tgggaatatc tggacggaaa aaccgatttc ccggcatttg
      901 tcgagaaagg cattgccgcc acgcgccaac ttgccaaacg ccaactgact tggttgcgca
      961 aaacaccttt agactgcgtt accgacccgt tttcagacgg caattcatgc acacgcctga
     1021 ttgaggcggc aaaacggttt ttcggcgcat aaactatgct gaccacgccg ccgctcgccc
     1081 ccaaaaccgt cgccgcccta cacaggctcg gtatccgtac gctcgaagaa ctgcggcaaa
     1141 acggcgcggt tcaaaccttc ttgttattga aggcatcagg tttgaccctc acgaaaagca
     1201 cgctgtggca gcttcagtcg ctgctggacg gcacgccgcc gcaagaaatg gcgcaacacg
     1261 ataaaacccg cctgcttgcc gagttgaaaa accatccgcc cgtcgccgcc tttcccccgc
     1321 aaggcgaaat ggcgcatttc atgggtttgg cattggaaca ggcgaaactg tccgcattaa
     1381 tgggcgaaat acccgtcggg gcagtcatcg tttcagacgg caaaatcatc gcatcggcac
     1441 acaacacctg cattgccgac tgcaatgtca gccggcacgc cgaaatcaac gccttggcac
     1501 aggcaggcag cgaaatgcaa aactaccgcc ttgacggatg cgacatctac atcaccctcg
     1561 aaccctgcgc catgtgcgcg tccgcactga tacaggcacg aatcaggcgc gtgatctacg
     1621 gtgcggcaga acccaaaacc ggcgcggcag gaagcatcgt caacctgttt gccgacaaac
     1681 gcctcaatac gcacaccgcc atacggggcg gaatcctgca agaagaatgc cgcgccgtat
     1741 taagccgttt tttccaaaac aaaagaaaag gttgaaccta tgaccgcctt gctcgtcatc
     1801 ctcgccctcg ccctgatagc cgccggtacg gcgggcatcg tttaccccgc cctgcccgga
     1861 ttggcattga tgtttgccgg aacctggctg ctcgcctact ccggcggcta ccaaatctac
     1921 ggcgcgggcg ttttgtggac ggtcggactc atcagccttg ccggcatact ggcggactat
     1981 gtggcaggca tatgggggac aaaatatacc ggagcgggca agctcgccgt tcgcggcgca
     2041 ttggtcggca gtatcatcgg tatgtttttc tcccttcccg gactaatact cggtcccttt
     2101 atcggcgcgg cggcaggcga actgatcgat cggcgcaata tgcttcaggc aggtaaagcg
     2161 ggcttgggta cgctgttggg gcttgtcgtc ggcacggcgt tcaaaatcgg ctgcgccgta
     2221 tccatcttgt ttatcctgtt ggtgaaatac atcgcctacc tgttttaacc ccttcagacg
     2281 gcataccggc aaattgctac aatgccgtct gaaccctttt cacaaagcac catatggcaa
     2341 accaaagacc tatctacggc ttccatgccg tcaacgcccg attgtggcaa aaccccaaat
     2401 ccatcgtcga actctatgtc caagaaggca aaaacgatgt acgcacgcgc gaagtgttgg
     2461 aaaaggcggc aaacgaaaac atccgcgtat attttgccga tgccgaccgc ctcaacgcca
     2521 tcagcaaagg tgcgcgccat cagggcgtgg tcggatttat cgatgcctcc aaaaaccacg
     2581 tccacctcga agacgtattg gaaaacttaa gcgaaccgcc gctgctgctg atactcgacg
     2641 gcatcaccga tccgcacaac ctcggcgcgt gcctgcgtac cgccgacgca atgggcgtac
     2701 atgccgtcat cgcaccgaaa gacaaaagcg cggggctgaa cgccaccgtc agcaaagtcg
     2761 ccagcggcgc ggcggaaacc gtcccctaca tcaccgtaac caacctcgcc cgcaccctgc
     2821 gcgagctgaa agaatacggc atttggatca tcggcaccga tatgggcggc aacgccgacc
     2881 tttaccattg cgatctgccc gacagcgcgg catgggtgat gggcaacgaa ggcgacggta
     2941 tgcgccgcct gacacgcgaa cattgcgaca tgctggtgtc catacccatg ttcggcacgg
     3001 tcgaaagcat gaacgtctcc gtgtctgccg gaatggtatt aagcgaaacc cgccggcagc
     3061 gcgtattaaa aaacgaaaaa gcgtaagcct caaaaacaat gccgtctgaa acagggattc
     3121 tgtttcagac ggcattcgtt ttcaaaatca gtgttccaag tggtcggtat caaacttgac
     3181 cgccgcctcg gttttatctt cgggcaagac caaattcagc aagactgccg taatgccgcc
     3241 ggcggaaata gagttttgga acaagacagg caggttttta aacacttccg gctcaaacgc
     3301 gacacccaag cccaaaccga ccgacgttgc cgcaattacc gcttcgcgcc tgcggatgcc
     3361 gtggctgacc aaaatccgca cgcccgcaat cgcaatcaag ccgaacatca aaaccatcgc
     3421 gccgcccaac accggactcg gaatcgtcgt aaacgcgcgt ccgacaacgg ggaacagacc
     3481 caacagcacc aaaatcacgg caatatattt gcccacatgg cgcgaagcca cgccggtcat
     3541 ctgaatcacg ccgttgtttt gcgcaaacgt cgtcagcggc agcgaaccca aagccgtcgc
     3601 aatcaccgac accaagccgt cagccaacac gccgccgcgc aggcgtttgg tgtattcctc
     3661 gccttcaatc ggctgatcgg acaccattgc cgtcgccgtc aaatcgccga ccgcctcaaa
     3721 cacgctcaac aggaaaatcg cgcccgccac aataaatgcg tgccagtcga aagcaaaacc
     3781 gtatttaaac ggtacgggca gcgtaaccag cggcaggttt tgcagcgcgg aaaaatccac
     3841 cttgcccaaa aacagcgcga caatgtaacc ggcaatcaga ccgaccgcga tgccgctcat
     3901 ccgcaacagc gggtttttca tgcagttgaa tatcaacaca atcagcaaca ccagcgaagc
     3961 cagccccaag ttttccatcg agccgaacgt gccgtccgcc ttcgcgccga agccgccgcc
     4021 gaaatcggta ataccgacgt gtaccaaact caagccaatg agcatcacga ccacgccgct
     4081 gaccgtcggc gtaatcactt ttttcaaata cggcaaaagc cacgccgaga aacacaccaa
     4141 aaacgcgccg acaaacgata cacccaagag cgtcgaaatc atcgcatcct tagtcaaacc
     4201 gccctccttc atccctgcgc ccagcgcaat catcacggta acgaacgaaa aattcaccga
     4261 ctggatggac agcatccccg aaccgaccgg cccgaagcgg ttgacctgca aataagtgcc
     4321 gacacccgac gcaaccatcg ccatcgacac gagatacgcc gtcatctcca ccggcaattc
     4381 cagcgcgccg cccacaatca gcgcgggcgt aatcatcggc acaaaaatcg ccaaaagatg
     4441 ggtaaccgcg ctcaagagcg cattaccgaa cggcggcctg tcttccaaac cgtacaccaa
     4501 atcaggcgca tccgcacctt tgcccaactg accgctcatt gtatttcctt attttaaagg
     4561 ttgaaaaatc caagcgcgga ttgtagcgaa tctgccgcac ggcttcaatt tgcatttcag
     4621 acggcatccg tctggtccac acgtttacca c
//
LOCUS       DBBZXW010000128         4513 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.128, whole genome shotgun sequence.
ACCESSION   DBBZXW010000128 DBBZXW010000000
VERSION     DBBZXW010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.128"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            434..958
                     /gene="nspA"
                     /locus_tag="ACJJD2_001926"
     CDS             434..958
                     /gene="nspA"
                     /locus_tag="ACJJD2_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HGG7580395.1"
                     /translation="MKKALATLIALAIPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            1094..1483
                     /locus_tag="ACJJD2_001927"
     CDS             1094..1483
                     /locus_tag="ACJJD2_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG7580396.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1561..2391
                     /locus_tag="ACJJD2_001928"
     CDS             1561..2391
                     /locus_tag="ACJJD2_001928"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HGG7580397.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2406..3863
                     /locus_tag="ACJJD2_001929"
     CDS             2406..3863
                     /locus_tag="ACJJD2_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HGG7580398.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3904..4293)
                     /locus_tag="ACJJD2_001930"
     CDS             complement(3904..4293)
                     /locus_tag="ACJJD2_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580399.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
BASE COUNT         1071 a         1441 c         1006 g          995 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaaaa ccgtatgcct gcacctgcaa
      181 caatccgaca gataccgctg ttttttccaa accgtttgca agtttcaccc atccgccgcg
      241 tgatgccgcc accaccattt aaaggcaacg cgcgggttaa cggctttgcc gtcggcaaag
      301 cagccggata ccgctacgta tcttgaagta ttgaaaatat tacgatgcaa aaaagaaaat
      361 ttaagtataa tacagcagga ttctttaacg gattcttaac aatttttcta actgaccata
      421 aaggaaccaa aatatgaaaa aagcacttgc cacactgatt gccctcgcta tcccggccgc
      481 cgcactggcg gaaggcgcat ccggctttta cgtccaagcc gatgccgcac acgcaaaagc
      541 ctcaagctct ttaggttctg ccaaaggctt cagcccgcgc atctccgcag gctaccgcat
      601 caacgacctc cgcttcgccg tcgattacac gcgctacaaa aactataaag ccccatccac
      661 cgatttcaaa ctttacagca tcggcgcgtc cgccatttat gacttcgaca cccaatcgcc
      721 cgtcaaaccg tatctcggcg cgcgcttgag cctcaaccgc gcctccgtcg acttgggcgg
      781 cagcgacagc ttcagccaaa cctccaccgg cctcggcgta ttggcgggcg taagctatgc
      841 cgttaccccg aatgtcgatt tggatgccgg ctaccgctac aactacatcg gcaaagtcaa
      901 cactgtcaaa aacgtccgtt ccggcgaact gtccgccggt gtgcgcgtca aattctgata
      961 tgcgccttat tctgcaaacc gccgagcctt cggcggtttt gttttctgcc accgcaacta
     1021 cacaagccgg cggttttgta cgataatccc gaatgctgcg gcttctgccg ccctattttt
     1081 tgaggaatcc gaaatgtcca aaaccatcat ccacaccgac aaagcccccg ccgccatcgg
     1141 cgcgtacagc caagccgtcc gagcaggcga caccgtttac atgagcggtc aaatccccct
     1201 cgatcccgcc acgatgaccg tcgtcggcaa cggcgatttc cgcgccgaag cgcgccaagt
     1261 gttccaaaac ctgcaagccg tcgccgaagc ggcaggcggc acgctggccg acatcgtcaa
     1321 actcaacgcc tacctgaccg acttgggcaa ttttgccgtc ttcaacgaag tgatggcgga
     1381 atttattgcc gagcccttcc ccgcccgcgc cgccgtcggc gttgcctccc tgccaaaagg
     1441 cgtgcaggtc gaagccgaag ccgtcctcgt tttgaacgca taattccacg ttcggactgc
     1501 atgatatttc aaaaccatgc cgtccgaacc gcaacacttt cccacttcac aacatctgca
     1561 atggcacatt acgcaatcgg cgacatacaa ggctgtttcg acgaactgac cgcgctgctc
     1621 ggcaaaatcg gtttcaacca cggcacggac accctctggc tgacgggcga catcgtcaac
     1681 cgcggcccga aatccctcga aacgctgcaa ttctgcatcc ggcacgaaaa cagcgtgcaa
     1741 atcgtcctcg gcaaccacga cctgcacctg ctcgctgtcg gctgcggcga aggcgcgccc
     1801 aaacgcagcg acacaatcga acccatactc aaacaccccg acggaaaaaa aatgctcgac
     1861 tggctgcgtg cgcaaccgct gttgatacgc gagggcagcc gcgtgatggt acacgccggc
     1921 atcctgccgc aatggcgcat cgccaaagcc gaatcgctcg ctagagaagc cgaagccgaa
     1981 ctgcgcggca aaaaatacgt caaattcttc tccaaaatgt acggcaacaa accggccgcg
     2041 tgggacgaag gtttggaagg ctatgcccgc ctgcgcttca tcgtcaacgc cttcacgcgg
     2101 atgcgcgccc tgacctttaa aaacgaactg gatttcgact acaaatccac agtgaaaaaa
     2161 atgccgcctt acctgcgccc gtggttcaaa gcccccgacc ggcaaaacct cgaccgcacc
     2221 atcatcttcg gacactggtc ctcgctgggc tacacgaatg ccgacaacgt catctcgctg
     2281 gacaccggcg cgctgtgggg cggacagctg accgccgtca acctcgaaac ggaagaaatt
     2341 acccaagtcc aagccgccgg cggcatagac tggaaaagct tcgcaaaata acggaccgcc
     2401 ccactatgca caaaatcctg cccatcgccc acgtcctctc ccgactgggt atgctgtttt
     2461 cctttatcct gctgataccc gccgccctct cctacgcctt ttcggacggc gcgtacaccg
     2521 ccttcgccac caccgcgacc gttacccttt ccggctcgtg catcgtccgg ctcgccaccc
     2581 tccggttcag gcgcgaactg cgcccgcgcg acggcttcac cctcgtcctg atgttgtggc
     2641 tggcgtttgc cgctatggcg gcgatgccga tgtacctgta tttcccgaat atgggcttta
     2701 ccgacgcatt ttttgaatcg atgtcgggac tgaccaccac cggcgcgacc gtcatccccc
     2761 acgtcgacgg gctcgccccc tccgtcaact tttggcggca tatgctcaac tggctgggcg
     2821 ggatgggcat catcgtcctt gccgtcgcca tcctgcctat gctcggcgta ggcggcacgc
     2881 agttattcaa agccgaaatc cccggcattg acaaagaaag caaaatgtcg ccgcgcattt
     2941 cccaagtggc gaaaaaactt tggttcggct acaccctgat caccatcctc gcggcagcct
     3001 gcctgcattt tgccgggatg ggctggttcg atgccgtctg tcacgcgatg gcgaccctct
     3061 cgctgggcgg gttttccacc cacgatgcca gcatagctta ttacaactcc cccctcatcg
     3121 aagcggtcat catcgttttc accattgtcg gcggcatcaa ttttgccaac catttcgccg
     3181 ccctcaacag ccgcagcctc aaaacctatt ggaaagacga agaatgccgg acgatgctgc
     3241 tgctgctctc cggcagcatc cttgccgccg ccctgtacct gtggcacacc ggctattacg
     3301 ccggttttac cgaatccctg cgctacaccg ccttcaactt cgtctccatc ggactggcaa
     3361 acgggctggc caacaccgac ttcgcacaat ggccgctcct gatttccctg tggatgtttt
     3421 tcctcgccaa catcctcgcc aactccggct cgaccggcgg cggcatcaaa accatacgcg
     3481 ccctcgtcct gttcaaattc agcctgcgcg aaatgatggt gctgctgcac cccaaagccg
     3541 tccgcaccgt caaaatcagc ggcaaggcca tacccgaccg cctcgcgctg accgttatgt
     3601 ccttcatctt catctacttt atgaccgtcg tcctcttcag cttcctgctg atggcgagcg
     3661 gtatggaatt taccaccgcc ttcaccgccg tcatcgcctg catcaccaac gccggccccg
     3721 gcctgggcga agtcgggccc gccggcaatt acgccggttt ggacgtgatg cagaaatgga
     3781 tctgcgttac cgccatgctc ttgggcaggc tggaaatctt caccgtcttc atcctcttca
     3841 cccccgccta ctggaagaaa taaaaaatgc cgtctgaaaa cttttcagac ggcatattgt
     3901 cttttaaaaa agcggaagct ctacaaaagg aaagaaatgc tgaaacctct gataaatttc
     3961 aggatatttc tctaaggctt ttaatgcttt ttcttttgaa ataggcggat catagacatc
     4021 tatccccctt aagaaggcaa tgcccgttaa tgcatttttt tgatcatttg aaatgtaacc
     4081 ataattaacg actccaatta catcataaat ttcccctata ctcttatcaa aatcaatcaa
     4141 atcaaaaata tacaatggaa ttgtatcaat aggagtatct ctgacaacta tatccaacca
     4201 taatttaaat tcagaaagat taatagcatc atagaacata cagactattg caaatcctaa
     4261 atcttcacaa ttttctttac taattttcca cataattatt tacctttatc cattgcttcc
     4321 caaccgatac atccggtatt ttagattctc ctttgccgtc aaacgctctt ttggttacct
     4381 gctttgtatc aaaaatgccg tctgaaagcc gaataccgct tcagacggta ttttgattgt
     4441 tgggttttta atcagagctt tgtttgataa tttgttattt tgaataaaat acaggttctg
     4501 tcgagctgat aac
//
LOCUS       DBBZXW010000129         4500 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.129, whole genome shotgun sequence.
ACCESSION   DBBZXW010000129 DBBZXW010000000
VERSION     DBBZXW010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4500
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.129"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(115..1053)
                     /locus_tag="ACJJD2_001931"
     CDS             complement(115..1053)
                     /locus_tag="ACJJD2_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7580400.1"
                     /translation="MLELNGLCKRFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIQLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAETERLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRGTLRRMTAERIRNGGIPAVLVTHSPEEACTTADEIAVMHEGKILQYGTPET
                     LVQTPADVQVARLMGLPNTDDDRHIPQHAVRFDQDGIACRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMRHAGEISGNDTVHIRIEDREIVRFR"
     gene            complement(1062..1937)
                     /locus_tag="ACJJD2_001932"
     CDS             complement(1062..1937)
                     /locus_tag="ACJJD2_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HGG7580401.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGKRSPHKAVDPDK
                     LDNIAAGGVSGGEMPSEAVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2119..2195)
                     /locus_tag="ACJJD2_001933"
     tRNA            complement(2119..2195)
                     /locus_tag="ACJJD2_001933"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2159..2161),aa:Met,seq:cat)
     regulatory      2345..2444
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2535..4436
                     /gene="thiC"
                     /locus_tag="ACJJD2_001934"
     CDS             2535..4436
                     /gene="thiC"
                     /locus_tag="ACJJD2_001934"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HGG7580402.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRG
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKSGGNVTQLHYARRGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTHPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1072 a         1299 c         1198 g          931 t
ORIGIN      
        1 gcggtttcag ttgtttccga taaatttttg cagccctgat aaaaaatatg gctgctttgg
       61 taaaaaaatg ccgtctgaaa ggtttttcag acggcatttg tttttaagga agcatcagcg
      121 gaagcggacg atttcccggt cttcgatacg gatgtgtacc gtatcgtttc ccgatatttc
      181 accggcgtgc cgcatatcga ggttcagcca caggatgccg tgttccggat ggaggacgga
      241 caggctgaac gattcgggca aacaggtgcg ggacaatacg cggcacgcta tgccgtcttg
      301 atcgaaacgc actgcatgtt gcggtatatg gcggtcatcg tcggtgttgg gcaaccccat
      361 cagtcgggcg acctgcacgt cggcaggcgt ttgaaccaag gtttcgggcg tgccgtattg
      421 gaggattttc ccttcgtgca tcacggcgat ttcgtccgcc gtcgtacagg cttcttcggg
      481 cgaatgggta accaaaacgg cagggatgcc gccgtttcgg atgcgttcgg cggtcatacg
      541 gcgcagcgtg ccgcgcaaat gcgtgtccaa actggaaaac gattcgtcca gcaacagtag
      601 ggaagggcgg acaaccaaag cgcgtgccag tgccaaccgt tgtttctcgc ctccggaaag
      661 tttttcaggc ttgcggtgtg cctcgttttc cagtccgact tcggcaagtg ccgccatagc
      721 aaggcgttcg gtttcggctt tcggcatttt ttgcattttc aaaccgaatg ccgcattttc
      781 cagcgcactc atatggggaa acagcgcgta atcttgaaac atcagcgaaa tacggcgttt
      841 ttcgggcggc atacgggtaa tgttttcccc gttcagctga atttcgccgc cgtccggccg
      901 gacgatgccc gcaatcatat tcagcagggt ggattttccg cagcccgacc gccccagtac
      961 ggcgagtatt ttgccgcgcc cgacagtcag gcagatgttg tcggcaaccg ttttgccgcc
     1021 gaagcgtttg cagagtccgt tcagttcaag catggcgcat cctataaacg tatgccgtcc
     1081 agccactcgg acagcggatg ggcggcatca atcagaccgt aacggcaaaa cgcgtccagc
     1141 gtaaccagtt gcgcgtcgtg catcatgttt cccgacaaca tggtggcaac caagctgccg
     1201 atgtccattt tttcaaaaca cgcaacctcg ccgtcctgat tttcaggcag gaaggtttcg
     1261 ggtaggacgg catcgaatac atacaggatt tcattgtgca caccccggct gacggggcgc
     1321 aggctgtgca gccgggatac cggacggata aacggaaaca gcgttttatc caaaccggct
     1381 tcttcgctgc tttcgcggca cacggcttca gacggcattt cgccgccgga aacaccgccg
     1441 gcggcaatat tgtcgagttt gtcgggatcg actgctttgt gcggactgcg cttgcctatc
     1501 cagaaatgcc atcggccgtc cgattcggtc agtccgttga gatggacggc gcggctgagc
     1561 agtccgaacg gacggaaagc ggcgcgttcg agcgtgaaca aggggttgcc gccgccgtcg
     1621 gtcaggtcga aacactcgtt gcgccatccg tgaagcagcc ccgccttgtt ccatgtgcgg
     1681 gcgaggtgct gcaagcggcc gcccatatct gaccagccgt ccgcattcag gaaaatgccg
     1741 tctgaagact ccgagcagcc tgcctcccag tcttttttga cgcgctccgc ccattccggc
     1801 gacagattgc ccaaaggcag acggttcaga tacagcgttt tccagcaact ttctgcaccg
     1861 taacttgctt ttgcccactc gaacagggca tcaaggtcgt gtttgctgac ggattcggta
     1921 aaacggacgg tcggcatagt cggctttctt gaagacaatg cggaagattg tagccaaact
     1981 gcctgaattt gcaaccgcaa acagacggcg ggctgccgtt ccgatattgc ggcaggaagg
     2041 aaaatccggc aaaaaacgga ggcggcagga aacaggtaaa acaaaacccc tcggcattga
     2101 accgaggggt ttgatatttg gttgcgggag caggattcga acctacgacc ttcgggttat
     2161 gagcccgacg agctaccatg ctgctccatc ccgcgtcaga agatgaaact atacggcaga
     2221 ttttttatgt tgtcaaacat tacttccgcg aaaaatcata aaattttgcc gtccggcggt
     2281 ttatgcctga tttgaaatat tattttcttt acaaaagttc atgttcgtga tttaattttg
     2341 gttaacattg aaacaggggt gctgcctgat gttcaggcgg ctgagaaata ccctttacac
     2401 ccgatcggga taatacctgc gtggggagtt ttcacggatt ctgcctttca gacagcattg
     2461 gttttcaaat gccgtctgaa aacgcgaaac gctcctgttt ctttatttta aacgagaaaa
     2521 caggagcatt ttttatgact acgccaaaaa aaaccgccaa aacttccggc aacgaagcgc
     2581 gcgaacttgc cgacttgagc gaagacatcg gcatccgctt caaatatccg aactcggaac
     2641 gcgtgtatct gcaaggcagc cgtggcgaca tccgcgtgcc tttgcgcgaa atccgccagg
     2701 acgacaccta cacggcgcaa ggcacggaag ccaacccgcc gattcccgtc tatgacacca
     2761 gcggcgtgta tggcgatccg gcggcgcaca tcgacctgaa acaaggcctg ccgcacatcc
     2821 gcaccgcatg gctgaacgaa cgcggcgata ccgaaatcct gcccaagctc tccagcgaat
     2881 acggcatcga acgcgcacac gatccgaaaa ccgcccatct gcgcttcaac caaatcaccc
     2941 gcccgcgccg cgcgaaaagc ggcggcaacg ttacccagct tcactacgcg cgccgcggca
     3001 tcatcacgcc cgaaatggag tttgtcgcca tacgcgaacg tttaaaatta gacgaattgt
     3061 cccaaaaacc ggaatacgcc aaactcttga aacagcacgc agggcaaagt ttcggcgcga
     3121 atatcccgac ccatcccgac caaatcacgc ctgaattcgt gcgccaagaa atcgccgccg
     3181 gacgcgcgat tatccccgcc aacatcaacc accccgaact cgaaccgatg attatcggcc
     3241 gcaacttccg cgtcaaaatc aacggcaatt tgggcaactc cgccgtcacc tccagcctga
     3301 ccgaagaagt cgaaaaaatg gtgtggtcgc tgcgttgggg cgcggacaca attatggact
     3361 tatccacagg cgcgcacatc cacgaaacgc gcgaatggat tatccgcaac gcgcccgtcc
     3421 ccatcggcac tgtgccgatt taccaagcgt tggaaaaaac cggcggcatc gccgaagatt
     3481 tgacttggga tttgttccgc gacaccttaa tcgaacaggc ggagcaaggc gtggactatt
     3541 tcaccataca cgcgggcgtg ttgctgcgtt atgtaccgat gaccgccaac cgcctcaccg
     3601 gcatcgtctc gcgcggcggt tcgattatgg cgaaatggtg tttggcacat catcgggaaa
     3661 atttcctcta cacgcatttc gacgaaatct gcgaaattat gaaagcgtat gacgtatcgt
     3721 tcagcctcgg cgacggcctg cgccccggct gcattgccga tgccaacgac gaatcccaat
     3781 tcgccgaact gcacaccttg ggcgaattga ccgataaagc gtggaaacat gacgtacaag
     3841 tcatgatcga aggccccggc catgtgccgc tgcaacgcgt caaagaaaat atgaccgaag
     3901 agctgcaaca ctgttttgaa gcgccgtttt acaccctcgg cccgctcgtt accgacatcg
     3961 cccccggcta cgaccacatc acctcgggca taggcgctgc caatatcggc tggtacggca
     4021 cggcgatgct ctgttacgtt acccccaaag aacatttggg actgcccgac aaagaagacg
     4081 tgcgtaccgg catcatcacc tacaaactcg ccgcccacgc cgccgacctc gccaaaggct
     4141 ggccgggcgc acagttgcgc gacaacgccc tgagcaaggc gcgtttcgag ttccgctggc
     4201 gcgaccagtt ccgcctaagc ctcgaccccg aacgcgccga aagcttccac gacgaaaccc
     4261 tgcccgccga aggcgcgaaa atcgcccact tctgttcgat gtgcggcccc aaattctgct
     4321 cgatgaaaat cacgcaggaa gtgcgcgact acgccgacaa gcaaaaagcc caacggcagg
     4381 gcatggagga aaaagcggtc gagttcgtca aaaaaggcgc gaagatttac agttgaaacg
     4441 tcaagcaaaa aatgccgtct gaaacccgga aaaaaggctt cagacggcat tctttcgctt
//
LOCUS       DBBZXW010000130         4376 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.130, whole genome shotgun sequence.
ACCESSION   DBBZXW010000130 DBBZXW010000000
VERSION     DBBZXW010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.130"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1233
                     /gene="mafB"
                     /locus_tag="ACJJD2_001935"
     CDS             <1..1233
                     /gene="mafB"
                     /locus_tag="ACJJD2_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HGG7580403.1"
                     /translation="IKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANKKIFEHNAKL
                     DRWGNSMEFVNGIAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AVIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKA
                     AVSGDFSKSYTCSFHGSTLVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTTRYG
                     NPYQETVYIEVSDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQ
                     NITLKQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNSCPPYKRPNNATTKAQRESV
                     QGKPCVECGKLAEKMIADHKKPLVVEYYETGTIDKSKMRAIESVQPQCPTCSAKQGGR
                     LSQYSKEQKRKLSNGNKK"
     gene            1217..1570
                     /locus_tag="ACJJD2_001936"
     CDS             1217..1570
                     /locus_tag="ACJJD2_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580404.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQANLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            1560..1883
                     /locus_tag="ACJJD2_001937"
     CDS             1560..1883
                     /locus_tag="ACJJD2_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HGG7580405.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKSMIIEFFIEGSQKNLQSIES
                     QLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFDIAQKNDCNYEGF
                     GSYGN"
     gene            2118..2387
                     /locus_tag="ACJJD2_001938"
     CDS             2118..2387
                     /locus_tag="ACJJD2_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580406.1"
                     /translation="MSVKELFKVILDKNKDFPIRTIHRTPIGILPKPVALSIVQYEDD
                     QGFYLFYLDETGQEQTDTYHDTLDSAFEQVEFEFGISKEEWMQSP"
     gene            2369..2521
                     /locus_tag="ACJJD2_001939"
     CDS             2369..2521
                     /locus_tag="ACJJD2_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580407.1"
                     /translation="MDAKPLGGNIKMPLYFSDGISVNKKVGIGAQNSLRLAGIGMKSL
                     RKNDYS"
     gene            2508..3053
                     /locus_tag="ACJJD2_001940"
     CDS             2508..3053
                     /locus_tag="ACJJD2_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HGG7580408.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVGNLSDMNRKPFVW"
     gene            3187..3816
                     /locus_tag="ACJJD2_001941"
     CDS             3187..3816
                     /locus_tag="ACJJD2_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HGG7580409.1"
                     /translation="MVKTADGYKAIAHIRVGESVLSKDEASGKTGYKPVTAQYGNPYQ
                     ETVYIEISDGIGNSQTLVSNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESKIAELTNKIIPGMSKNERLKIERTIRNITKNANRKAKGEEHGRRGR"
     gene            3797..4252
                     /locus_tag="ACJJD2_001942"
     CDS             3797..4252
                     /locus_tag="ACJJD2_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580410.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITEYKNILETFMYEPPDEF
                     RTEYYESPDSNLLISVKKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            4259..4315
                     /locus_tag="ACJJD2_001943"
                     /pseudo
     CDS             4259..4315
                     /locus_tag="ACJJD2_001943"
                     /inference="COORDINATES: protein motif:HMM:NF026864.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="toxin C-terminal domain-containing protein"
BASE COUNT         1459 a          881 c          907 g         1129 t
ORIGIN      
        1 attaaactca atccgaccga cacccgcagc atccggcaac gcatatccga caactacaac
       61 aacctcggca gcaatttctc cgaccgcgcc gatgaagcca acaaaaaaat attcgagcac
      121 aatgccaagc tcgaccgctg gggcaacagc atggagtttg tcaacggcat cgccgccgga
      181 gcactcaacc cctttatcag cgcgggcgaa gccttaggca taggcgacat actgtacgga
      241 acgcgctatg ccatagacaa agccgcaatg cgcaacatcg cccccttacc cgccgagggc
      301 aaattcgccg tcatcggcgg cttgggcagc gtggcgggct ttgaaaagaa tacgcgcgaa
      361 gccgttgacc ggtggataca ggaaaacccc aatgccgccg aaaccgtcga agccctggtc
      421 aacgtcctgc cgtttgccaa agtcaaaaac ctgacaaagg cggcaaaacc ggggaaggct
      481 gcggttagtg gggatttttc taaatcctac acctgctcct tccacggcag caccttggtc
      541 aaaacggcag acggctacaa agccattgcc catattcaag ccggagaccg cgtcctttcc
      601 aaggacgagg caagcggaga aacgggatac aaacccgtta ccacccgata cggtaatccg
      661 taccaggaaa ccgtttacat tgaagtttca gacggcatcg gcaacagcca aaccctgatt
      721 tccaaccgca tccatccgtt ttacagtcaa ggaaaatgga tacaggcagg tcgtctgaaa
      781 aaaggcgaca ccctgctttc cgaaagcggc gcaaaacaga cggttcaaaa cattaccctc
      841 aaacagcagc cgctcaaagc ctacaacctg accgttgccg actggcatac ttacttcgtc
      901 aagggagata aggcggaaac ggaaggggtg tgggttcata attcttgtcc gccatataag
      961 agaccaaata acgcaacgac aaaagcacaa cgagaaagtg tacaaggaaa accctgcgtt
     1021 gaatgcggta aattagccga aaaaatgatt gccgaccata aaaaaccatt agttgtcgag
     1081 tattatgaaa cagggacaat tgacaaatct aagatgagag caattgaatc agtacaaccg
     1141 caatgtccga cttgttctgc aaaacaagga gggagattaa gccaatattc aaaagaacag
     1201 aaaaggaaac tgagtaatgg gaataaaaaa tgaacaaata ataatttgta aaaaatataa
     1261 tacagaaata tatcctgttt ccgatgtttc aaaaatcggt gttgctgaaa atgtcaaaca
     1321 ggcaaacctg tatccgatta acgggttaag gcaccgtccc aaaggtgata ctaacggttg
     1381 gtatatctgg gccggtgaaa acttctccta tgataaaaat tttttcctgc ccttgcatac
     1441 tttccatttg caaatatggc gacccgaaat catccccttt ttgacacttc cgcccggtta
     1501 ccgtttttta attggggaaa acggttatga agacgtatgg tttgatgagt tgctattaaa
     1561 tgataattga cgaaaaatct acttcagatg tactgaaaca atatcaagaa ctagggtttg
     1621 atttgacaaa atcgatgata atagagtttt ttatagaggg ttctcaaaaa aatctgcaat
     1681 caatagaaag ccaactcatt tcttatcggc aagattttca aatcagtatt gaacaagatg
     1741 aattcggaga aatgtggact tgctattgtt ccgtcaatat cgtcccttcc cttgaaaaca
     1801 ttttagctat tgaaactacg ttatttgata ttgcacaaaa aaatgattgt aattatgaag
     1861 gttttggttc gtatgggaac taacaagaag tgtaggttgg gttgaaaaac acaacaatca
     1921 aaaggtcgtc tgaaaccatg tttaattttc agatggcttt tccttcattt aaaacaggat
     1981 attgagatct aagttcttta aaaatcctac acctgctcct tccacggcag caccttggtc
     2041 aaaacggcag acggctacaa agccaatgga cgtgtaatag aaaatagtgc agtaacaatt
     2101 attcggatta aaaaattatg agtgtaaaag aattattcaa agttatctta gataaaaata
     2161 aagattttcc tattagaacg attcatcgca cgccaatagg gatacttccc aaacctgttg
     2221 ctttaagtat tgttcaatat gaagatgacc aaggatttta tttgttttat ttggatgaga
     2281 ccggtcagga acaaacggat acttatcatg acacattaga ttcggcattt gaacaggtgg
     2341 agtttgaatt tggaattagc aaagaagaat ggatgcaaag cccttaggtg gcaatatcaa
     2401 gatgccgctt tatttttcag acggcatttc cgtcaataaa aaagtcggta ttggagccca
     2461 aaacagccta cgtcttgccg ggatagggat gaaatcttta agaaaaaatg attatagttg
     2521 aacatttaga acattatttg ggtgaaatcg aaagcggtat aaaatgcttg gatcgacgtt
     2581 atcatctcag cgtttccgtc ttcccatcac aaccatataa aggggtaact actttttcta
     2641 ctttaggctt gaatcgatat gacttgaact ataagagtag gtttgaatta atttttacct
     2701 gttctgaaga atggaataaa gaaaatattg cagcttttct atcaggagta gccgaatatt
     2761 tgattgacaa tagacaacct attttaagag gtgaaattat tcaattacct agggtaatta
     2821 tcgaaggtag caaaatggac gcactgtatg tttccgcccc attttatttc gacgatgatt
     2881 ttcaggtctg ttatggcgaa cactacaata tcgttttccc tttgcttgtc ccgttgtata
     2941 aacaggaagc agaattggtg gaaaagaaag gttggaatgc ttttgagcag ttcttgctgg
     3001 ataatgaagt tggcaacctt tcggatatga atcggaaacc gtttgtttgg taagggcttt
     3061 cttaaatttg attaaaggtc gtctgaaacc gtgtttaact ttcagacaac ctttccttca
     3121 tttgaaacag gatattgaaa actaagtttt tcaacattct acacctgctc cttccacggc
     3181 agcaccttgg tcaaaacggc agacggctac aaagctattg cccatatccg agtcggcgag
     3241 agcgttcttt ccaaggacga ggcaagcggg aaaacaggat acaaacccgt taccgcccaa
     3301 tacggtaatc cgtatcaaga aaccgtttac attgaaattt cagacggcat cggtaacagc
     3361 caaacccttg tttccaataa aatccacccg ttttacagtc aaggaaaatg gatacaggca
     3421 ggtcgtctga aaaaaggcga caccctgctt tccgaaagcg gtgcaaaaca gacagttcaa
     3481 aacattaccc tcaaacagca gccgctcaaa gcctacaatc tgaccgttgc cgactggcat
     3541 acttactttg tcaaaggcga taaggcggaa acggaaggag tttgggttca taattcttgt
     3601 ccgcctaaaa gaacaggaag ctccaagaat gaaaaacatg gagatggcgg tcgaagtcaa
     3661 atatcagcgg aatcaaaaat tgctgaatta acaaataaaa ttattcccgg aatgtccaaa
     3721 aatgaacgct taaagattga gcgaacaatc agaaatatta caaaaaatgc caatcgaaaa
     3781 gcaaaaggag aagagcatgg tcgacgcggt cgttaaaact cccgaatttt taccttttac
     3841 ttctgtagga atattccgtt ttggtgcgga tataacagag tacaaaaaca tactggaaac
     3901 ttttatgtat gaacctcctg atgagtttag aacagaatat tatgaatctc ccgactcaaa
     3961 tttactcatt tccgtcaaaa aaaacaaaat tatttcgata ttttgttatc aggagctata
     4021 ttttatgggc gttaatataa taggtctgaa ttttgaagat tttaaacagc ttttccatca
     4081 ccctaaatca tacggtgttg ataaatatta tttatcaaat gaatcttatc cgacatatgt
     4141 ctatgagttt gatgaaatag gagtacaagc atgggaagca aaagggaaaa ttgttactat
     4201 cattgccggg ggcaaagaca attattcaac agaaccttac tacgatgaat aacattacag
     4261 aaaagaaaca agaaacggta catttgataa aaacctaaat cgtattggag attaattatt
     4321 atgtgtatta tgtgtgagtt aaaaaacttc agaagaaata ttacttgttt tgaggg
//
LOCUS       DBBZXW010000131         4362 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.131, whole genome shotgun sequence.
ACCESSION   DBBZXW010000131 DBBZXW010000000
VERSION     DBBZXW010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4362
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.131"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(178..588)
                     /locus_tag="ACJJD2_001944"
     CDS             complement(178..588)
                     /locus_tag="ACJJD2_001944"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580411.1"
                     /translation="MGNTAMWMSCNPTIPILFGIQVKIFPLNQILNHIHPARYAVTFE
                     NNVDSKLRRHWVAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAILCNK
                     ERLTSSEPLSDFVLSVLKPYILRPLYIASLRRDD"
     gene            complement(712..1065)
                     /locus_tag="ACJJD2_001945"
     CDS             complement(712..1065)
                     /locus_tag="ACJJD2_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580412.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            1301..2728
                     /locus_tag="ACJJD2_001946"
     CDS             1301..2728
                     /locus_tag="ACJJD2_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HGG7580413.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLKPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSVQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            2797..4200
                     /locus_tag="ACJJD2_001947"
     CDS             2797..4200
                     /locus_tag="ACJJD2_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HGG7580414.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
BASE COUNT         1103 a         1070 c         1157 g         1032 t
ORIGIN      
        1 ttagataagg ggggaaggtt tgaagcggtt gccggcttcc tgccgtccgt cggcgcgtcc
       61 gtcatcacgc cggcaaccgc ctttgtcatc ccttgcttat cttccatggt gcgaatcctc
      121 aaaaacgggc aaaaaaaagc cctgttactt gtagaaagta aaggacgtta atttttgtta
      181 atcgtccctt cttagggacg caatatataa gggacgcaat atataaggtt ttaaaacgct
      241 aagaacaaaa tccgataacg gctctgaaga agtaagtctt tctttattgc acaagatagc
      301 aaacttccac ggcattctcg ccccacccgt gccgtccaag cctttttcaa agacatagat
      361 ggttttcttg gcaatcactt cgtcagtttg gcggtcgata atccgtatgg tcgcacctgc
      421 cacccagtgc ctgcgcagct tggaatcgac attgttttcg aacgttaccg cataacgggc
      481 ggggtgtata tgattaagta tttgatttag cggaaaaatc tttacctgaa taccgaataa
      541 tatcggaatg gttgggttgc aggacatcca catagcggta ttccccatcg ctaaaaaatc
      601 ctaggaaacg agcaataaaa tttacgcctt cgctggtctg taaagccgca ttgtcccaca
      661 tcgggtctct ggtttttgca tctgccgaaa cggtacgctc aggtactacc ttcaacagca
      721 taatcccttc cacattgtcc gccgtctggt aaatctttcc cccgccgttt tgcattgttc
      781 gttaaacacg gcttcggctt ctttgtattt tctgtcccac tcttcttgtg cctgtatttc
      841 ttctttgatc gggccgaatt gtttgggaat aatccaaaca aacagcatca ggatagcggc
      901 ggcggtcagg ctgcctgaaa ggattttgcc ggggttccgt ttgggctttt tataggcaaa
      961 gcggacgaga aaccaaagca acagcagcat ggtgccccaa tagccgattg agaataggat
     1021 ggccaaacct tctaggaaat ggcgtaaatc gtttgtggta aacatgggtt gttcctgtgg
     1081 ttaaatgtgc aggctgcttt ttgccgaacc ttgccgcatc tcaaaagcag cctgcgcttc
     1141 agcgttgcgt tacgcagtaa aataatgaat atttgtaacg acttgggtat tttttgtcaa
     1201 tattcccgcc tttcccttaa cagctgccgc gctttccgtt aaaattcctt tacatattta
     1261 tattgtttcc tgtttctata ttgccaaggt tatacccgtt atgtttttct ccgccctgaa
     1321 atcctttctt tctcgataca ttactgtatg gcgcaatgtt tgggcggtgc gcgaccagtt
     1381 gaaaccgccc aaacgcacgg cggaagaaca ggcgtttttg cccgcgcatt tggaactgac
     1441 cgatacgccg gtctctgccg ctccgaaatg ggcggcgcgt tttattatgg cgtttgcgct
     1501 tttggctttg ttgtggtcct ggttcggcaa aatcgatatt gtggcggcgg cttcgggcaa
     1561 aacggtgtcg ggcgggcgca gcaaaaccat ccagccgctg gaaacggcgg tggttaaggc
     1621 ggtacatgtg cgcgacgggc agcatgtgaa acagggagaa acgctggcgg aactggaggc
     1681 tgtgggaaca gacagcgatg tggtgcagtc ggagcaggct ttgcaggctg cccaattgtc
     1741 caaactgcgt tatgaagcgg tattggcggc attggaaagc cgtaccgtgc cgcatatcga
     1801 tatggcgcaa gcacggtctt taggtctctc cgatgccgat gtgcaatcgg tgcaggtgtt
     1861 ggcgcagcac cagtatcagg catgggcggc gcaggatgcg caattgcagt cggctttgcg
     1921 cggccatcag gcggaattgc agtcggccaa ggcgcaggag cagaagctgg tttcggtggg
     1981 ggcgatcgag cagcagaaaa cagcagacta ccgccgtttg cgggccgaca attttatttc
     2041 ggaacatgcg tttttggagc agcagagcaa atcggtcagc aattggaacg atttggaaag
     2101 tacgcgcggt cagatgaggc agattcaggc ggccattgca caggcggagc agaatcgggt
     2161 gctgaatacg cagaacctga aacgcgatac gctggatgcg ctgcgccagg caaacgaaca
     2221 gattgaccaa taccgcggcc aaacggataa ggcaaagcag cggcagcagc tgatgacaat
     2281 acagtcgcct gcggacggca cggtgcagga attggctacc tatacggtgg gcggtgtggt
     2341 gcaggctgcc caaaaaatga tggtgattgc gcccgatgac gacaaaatgg acgtggaagt
     2401 tttggtattg aacaaagaca tcggttttgt ggaacaggga caggatgcgg tggtgaagat
     2461 tgagagcttt ccctatacgc gctacggtta tctgacgggc aaggtgaaaa gtgtcagcca
     2521 tgatgcggta agccacgaac agttgggctt ggtttatacg gcggtggtgt cgctggacaa
     2581 acataccttg aatattgacg gcaaagcagt gaatctgacg gcgggcatga atgtcacggc
     2641 ggagattaaa acgggtaaac ggcgggtgct ggattatctg ttaagcccgc tgcaaaccaa
     2701 attggacgaa agctttaggg agcgataggc ggatccgtac tgggcatttg ttatccgccg
     2761 gttcggacat gcagactgcc tgaaaccatt gcccggatga cattgctcaa tctaatgata
     2821 atgcaagatt acggtatttc cgtttgcctg acactgacgc cctatttgca acatgaacta
     2881 ttttcggcta tgaaatccta tttttccaaa tatatcctac ccgtttcact ttttaccttg
     2941 ccactatccc tttccccatc cgtttcggct tttacgctgc ctgaagcatg gcgggcggcg
     3001 cagcaacatt cggctgattt tcaagcgtcc cattaccagc gtgatgcagt gcgcgcacgg
     3061 caacaacaag ccaaggccgc attccttccc catgtatccg ccaatgccag ctaccagcgc
     3121 cagccgccat cgatttcttc cacccgcgaa acacagggat ggagcgtgca ggtgggacaa
     3181 accttatttg acgctgccaa atttgcacaa taccgccaaa gcaggttcga tacgcaggct
     3241 gcagaacagc gtttcgatgc ggcacgcgaa gaattgctgt tgaaagttgc cgaaagttat
     3301 ttcaacgttt tactcagccg agacaccgtt gccgcccatg cggcggaaaa agaggcttat
     3361 gcccagcagg taaggcaggc gcaggcttta ttcaataaag gtgctgccac cgcgctggat
     3421 attcacgaag ccaaagccgg ttacgacaat gccctggccc aagaaatcgc cgtattggct
     3481 gagaaacaaa cctatgaaaa ccagttgaac gactacaccg acctggatag caaacaaatc
     3541 gaggccatag ataccgccaa cctgttggca cgctatctgc ccaagctgga acgttacagt
     3601 ctggatgaat ggcagcgcat tgccttatcc aacaatcatg aataccggat gcagcagctt
     3661 gccctgcaaa gcagcggaca ggcgcttcgg gcagcacaga acagccgcta tcccaccgtt
     3721 tctgcccatg tcggctatca gaataacctc tacacttcat ctgcgcagaa taatgactac
     3781 cactatcggg gcaaagggat gagcgtcggc gtacagttga atttgccgct ttataccggc
     3841 ggagaattgt cgggcaaaat ccatgaagcc gaagcgcaat acggggccgc cgaagcacag
     3901 ctgaccgcaa ccgagcggca catcaaactc gccgtacgcc aggcttatac cgaaagcggt
     3961 gcggcgcgtt accaaatcat ggcgcaagaa cgggttttgg aaagcagccg tttgaaactg
     4021 aaatcgaccg aaaccggcca acaatacggc atccgcaacc ggctggaagt aatacgggcg
     4081 cggcaggaag tcgcccaagc agaacagaaa ctggctcaag cacggtataa attcatgctg
     4141 gcttatttgc gcttggtgaa agagagcggg ttagggttgg aaacggtatt tgcggaataa
     4201 agcaggctga aacggttatg aaattcccaa agcagcctgc accccgtttc gaaagtgcag
     4261 gctgctttgg gattgatccg atactttcac attctcattg cctttaaata aagcacagtt
     4321 aaaaacacat ttaaattaag tgcgaattaa ttcaaatgta ta
//
LOCUS       DBBZXW010000132         4334 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.132, whole genome shotgun sequence.
ACCESSION   DBBZXW010000132 DBBZXW010000000
VERSION     DBBZXW010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.132"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..764)
                     /gene="aroD"
                     /locus_tag="ACJJD2_001948"
     CDS             complement(<1..764)
                     /gene="aroD"
                     /locus_tag="ACJJD2_001948"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HGG7580415.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLEAKRLAAKPIVTMSMGQTGTVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            1018..2064
                     /gene="recA"
                     /locus_tag="ACJJD2_001949"
     CDS             1018..2064
                     /gene="recA"
                     /locus_tag="ACJJD2_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HGG7580416.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEVANEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            complement(2896..3231)
                     /locus_tag="ACJJD2_001950"
     CDS             complement(2896..3231)
                     /locus_tag="ACJJD2_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HGG7580417.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(3311..>4334)
                     /locus_tag="ACJJD2_001951"
     CDS             complement(3311..>4334)
                     /locus_tag="ACJJD2_001951"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the tau chain serves as a
                     scaffold to help in the dimerizaton of the alpha,epsilon
                     and theta core complex; the gamma chain seems to interact
                     with the delta and delta' subunits to transfer the beta
                     subunit on the DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HGG7580418.1"
                     /translation="DANAVIENTELQSPSAQTAEKETAAKKPQPRPETETAQTSVQTA
                     SAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTAQTSAKSIQTASEAETPPE
                     NQVSKNKAADNETNAPLSETPSENPIQATPNNEAVETETFAHEAPAEPFYGYGFPDND
                     CPVEDNAEIPPPDWEHAAPADAEEENNADEGSNDENNTPSAPPPEFSTENWAAIVRHF
                     ARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARATADKKRLDKIRDTLAQAYGLQL
                     TLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADPAAQKILQAFGAQWQPESLE
                     LAANRP"
     misc_feature    complement(4203..4242)
                     /locus_tag="ACJJD2_001951"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
BASE COUNT          865 a         1166 c         1244 g         1059 t
ORIGIN      
        1 cagtctgcgc cgctttcgag acagtcgagt gccgcacgga gggcggatac gccgatttgc
       61 cccggcgcgg agttttgcgt tcccgaaccg aacgtgatgc ttgagccgaa cacctgtccg
      121 gcaagccggc tgaccgtccc cgtctgtccc atcgacattg taacaatcgg tttggcggca
      181 agccgtttcg cttcgagcgt ggcggaaagc aaagtcagca catcttccgc gctttgcggc
      241 atcaccgcaa ttttgcagat gtccgcgccg cagtcctcca tctgtttcag acggcatacg
      301 atttcttctt gcggcggcgt gcggtgaaac tcatgattgc agagtagggc ggcgatgccg
      361 tttttttgag catttgccac ggcgcgccgg acggcggttt cgccggaaaa cagctcgatg
      421 tcgatgatgt cgggcaggcg gctttcgatc agcgcgtcga gcagttcaaa ataataatcg
      481 tccgaacacg ggaacgagcc gccttcgcca tgccgtctga acgtaaacag cagcggtttg
      541 tcgggcagcg cgtcgcggac ggtctgcgtg tggcgcaata cttcgccgat gctgcccgcg
      601 cattccaaaa agtcggcgcg gaactccgca atatcgaagg gcatattttt gatttgctca
      661 agtacggcgg aaagttcggc agcatcgcgg gcgacaagcg gcacggcgat tttggtgcgt
      721 ccgcttccga taacggtatt tttgacaaca aggcaggaac acataaaaca ggcacacaca
      781 gaaaaaacag ccgccattat aacaaagccg gccgcctttt agacggcatc cagattccat
      841 tccggcacaa gccgccgcgt cctgccgcat atcggcaagc aaggaaatat gcgataatgg
      901 caaccccgtg aagcagcatt accgatagcc cgcacatcgg gaaaacgata cacatcccgc
      961 gccgcagccc gtgttgcgcc gcatcccaca taccgcattt gttccggagt aaccccaatg
     1021 tcagacgaca aaagcaaagc ccttgccgcc gcactggcgc aaatcgaaaa aagtttcggc
     1081 aaaggcgcca tcatgaaaat ggacggcagc cagcaggaag aaaacctcga agtcatttcc
     1141 accggatcgc tcggattaga cctcgccctc ggagtcggcg gtctgccgcg cgggcgcatc
     1201 gtcgaaatct tcggccccga atcctccggc aaaaccaccc tctgcctcga agccgtcgcc
     1261 caatgccaga aaaacggcgg cgtgtgcgcc tttgtcgatg ccgaacacgc ctttgatccc
     1321 gtttacgccc gcaaactcgg cgtaaaagtc gaagagcttt acctgtccca gcccgatacc
     1381 ggcgaacagg ctttggaaat ctgcgacaca ctcgtccgtt cgggcggcat agatatggta
     1441 gtcgtcgatt ccgtagccgc actcgtcccc aaagccgaaa tcgaaggcga tatgggggac
     1501 agccatgtcg gactgcaggc gcgcctgatg agccaggctt tgcgcaaact gaccggacac
     1561 atcaaaaaaa ccaacacgct ggttgtgttc atcaaccaaa tccggatgaa gatcggcgta
     1621 atgttcggca gccccgaaac caccaccggc ggcaacgcgc tgaaattcta ttcttccgtc
     1681 cgcctcgaca tccgccgcac cggatccatc aaaaaaggcg aagaggtatt gggcaacgaa
     1741 acccgcgtca aagtcatcaa aaacaaagtc gcccccccgt tccgtcaggc agagtttgac
     1801 atcctctacg gagaaggcat cagttgggaa ggcgaattga tcgacatcgg cgtgaaaaac
     1861 gacatcatca acaaatccgg cgcgtggtac agctacaacg gcgcgaaaat cggtcagggc
     1921 aaagacaacg tccgcgtctg gctgaaggaa aatcccgaag tcgccaatga aatcgacgca
     1981 aaaatccgcg ccctcaacgg cgtagaaatg cacatcaccg aagggacgca ggacgaaacc
     2041 gacggcgaac gccccgaaga ataaaacctg aaatcccgat aaacggtact tctgctgcga
     2101 agtaccgttt ttttgagccg cctccgaacg gcttgatttg agttttggta tttttgcccg
     2161 acggggtgaa aaatacagtt gctacagccc gacctacgcc cgctttgcct ctatcctgcg
     2221 ccgactttac ggatgaagcc tgcgcctttt tatgtgcaac actttgcact tgctgaacaa
     2281 aattcaaacg cccctttata tcaaatgcaa aaaatatgcc gtcattcccg cgaaggcggg
     2341 aatccaaacc tgtcggcacg gaaatttatc gagtaaaacg gtttctcaga ttctacgttc
     2401 tagattcccg cgttcgcggg aatgacggtc gagggtttct gttttttccg atagattccc
     2461 gtggtttttc ggttactgga ttcccgcgtt cgcgggaatg acggtcgagg gtttctgttt
     2521 ttccgataga ttcctgtggt ttttcggtta ctggattccc gcgttcgcgg gaatgacggg
     2581 gtgtaagttt ctgctcccac ggggttggat tcccgttttc acgggaatga cgaagtttca
     2641 gacggcattt aagcggtacg gatgtgtaaa taatggtagg gtgggcttca gcctgccgat
     2701 tcccgctatt cttgccgttt ttgcgttctt atcattctca ctgtttttac cgttcacgcc
     2761 gaatcttgca aactgatgcc gtcattcccg cgaaggcggg aatccagacc cctcggcacg
     2821 gaaatttatc gagtaaaacg gtttctcaga ttctacgttc tagattcccg cctgcgtggg
     2881 aatgacggtc ggggatcagc ggaagaagtc gcccactccg gggggtagac cttgcgtgaa
     2941 tgcgcccatt gttttgtttg cggtttcttc ggctttgccc cgggcggatt tgagggcggc
     3001 gaggatgagg tcttcgagca tttctttgtc gtcggcggct tcttgaatca aatcggggct
     3061 gatgtcgatt ttgcgtactt cgtgcgcgca ggtcattgtg attttgacca ggccgttgcc
     3121 tgcttcgcct tcgatttcgg tttcggcaag tttggcttgc gcttttttca tattttcctg
     3181 catttgctgc gcctgtttca tcaggccgcc taatccggct tttccgaaca tactgaatac
     3241 tcctgtctgt tttgattgaa tgagggaaac ggcaatgccg tccgaagggt tcgggcggca
     3301 ttatatctgt ttacggccgg tttgctgcca attccagtga ttcgggctgc cattgcgcgc
     3361 cgaatgcttg gaggattttt tgtgcggcgg ggtcggcttc gagcaatgct tgtgcttttt
     3421 gcctgtcttc ggcttggacg cgcttgtcct gcatcgcggg ggtttccctg ccggcttcgt
     3481 cgcgccagtc ttgggtttgc agggtgagtt gcagcccgta ggcttgggca agggtgtcgc
     3541 ggattttgtc gaggcgtttt ttgtcggcgg tggcgcgggc ttcggcggtc atcgccaaaa
     3601 ccatcaggcc ggtgtcggga tggtattccg tccacgcgga gtgttgcgcc ggcatttgcg
     3661 ccgcgccgag tttgcgggcg aaatgccgga cgatggctgc ccagttttcg gtggaaaatt
     3721 cgggcggcgg ggcggacggc gtgttgtttt cgtcgttgct gccttcgtcg gcgttgtttt
     3781 cttcttccgc atcggcaggg gcggcgtgtt cccaatcggg cggcgggatt tctgcgttgt
     3841 cttctacggg gcagtcatta tccggaaagc cgtaaccgta gaaaggttct gcaggggctt
     3901 cgtgtgcaaa tgtttccgtt tcaacggctt cattattcgg tgttgcctga atggggtttt
     3961 cagacggcgt ttcggacaag ggggcattgg tttcgttgtc ggctgccttg ttcttggaaa
     4021 cttggttttc gggcggcgtt tcggcttcgg atgccgtctg aatgcttttt gccgacgttt
     4081 gcgccgtgcc ggctgcggtt tgggcttcgt ccggcgcgtc ttcccaaggc ggaacatcgt
     4141 tgttttcttg attggaaacg ggttcggcag ttttgctttc agacggcatt gccgctgcgg
     4201 atgccgtctg aacggatgtt tgggcggttt ccgtttcagg gcgcggttgg ggcttttttg
     4261 cggcggtttc cttttcggcg gtttgtgccg atggggattg aagttcggta ttttcaatca
     4321 cggcgtttgc atca
//
LOCUS       DBBZXW010000133         4052 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.133, whole genome shotgun sequence.
ACCESSION   DBBZXW010000133 DBBZXW010000000
VERSION     DBBZXW010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4052
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.133"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..632)
                     /locus_tag="ACJJD2_001952"
     CDS             complement(<1..632)
                     /locus_tag="ACJJD2_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HGG7580419.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKHN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKMFSLYREDSLISRLN
                     RDGYLTSPSADFLELLSLCRDIHALTEGAFDPTVQVLWKLYADYFSAHPDAETPPPEN
                     SVKEALKRVGFGKVSFDDREIRFTEKGMGLSLNGIAQGYSGLTKTSTALPR"
     gene            complement(641..1435)
                     /locus_tag="ACJJD2_001953"
     CDS             complement(641..1435)
                     /locus_tag="ACJJD2_001953"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HGG7580420.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAAVSV"
     gene            1858..3192
                     /gene="gdhA"
                     /locus_tag="ACJJD2_001954"
     CDS             1858..3192
                     /gene="gdhA"
                     /locus_tag="ACJJD2_001954"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HGG7580421.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3334..3708
                     /locus_tag="ACJJD2_001955"
     CDS             3334..3708
                     /locus_tag="ACJJD2_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580422.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3752..4009
                     /locus_tag="ACJJD2_001956"
     CDS             3752..4009
                     /locus_tag="ACJJD2_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HGG7580423.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQQ"
BASE COUNT         1109 a         1056 c          949 g          938 t
ORIGIN      
        1 cgaggcaacg ccgtactggt ttttgttaat ccactatagc cttgcgcgat gccgttcaag
       61 gacaaaccca tacccttttc ggtaaaacgg atttcacggt cgtcaaacga gactttgccg
      121 aagccgaccc gcttcagggc ttccttcacg ctattctccg gcggcggcgt ttccgcatcg
      181 ggatgggcgg aaaaataatc ggcatacagt ttccacaaaa cctgaaccgt cggatcgaac
      241 gcgccttccg tcagcgcgtg aatatcgcgg cacaggctca acagttccaa aaaatccgcc
      301 gacggcgaag tcagataacc gtcacggttc aggcggctga tcaggctgtc ttcacggtaa
      361 aggctgaaca ttttttccaa acgcgccact tccgccaaaa ccttattgac caaatccgcc
      421 gcctgtctgt cgtccacgcc gaacagacgc agctccgcac cggaacccag cgcgacacct
      481 ttccagaaaa acacattttc attgtgtttt tcatctttat tgcgtttttc atcatcggcg
      541 gcaaaaggat tcggcaaaaa agaaaccgcc gcgcccgccg ccgcaacggc ggcaactgtc
      601 aaaaaacgcc tgcgcccgaa atgcctgccc ataccgcctc ctaaaccgac actgccgcct
      661 tgatgtgcgg atgcggatcg tagccttcca actcaaaatc ttcaaatttg aaggcaaaca
      721 aatctttgac ttcaggattg attttcatca caggcaaggc gcgcggttcg cgttccaact
      781 gcaatgcggc ctgctcgaaa tggttgcggt acaggtgcgc gtcgccaaac gtatggacaa
      841 actcgcccgc ctccaatccg cacacttgcg ccatcatcat ggtcaacagc gcgtagctgg
      901 caatattaaa cggcacacca aggaaaatat ccgcgctgcg ctggtaaagc tggcaggaca
      961 gtttgccgtc ggcaacgtaa aactgaaaca gcgcgtggca gggcggcaat gccatttcat
     1021 cgaccaaagc cggattccac gccgatacaa tcaggcggcg cgagtcgggg tttttcttaa
     1081 tttgttccac cacattggcg atttggtcga tatgcctgcc gtcgggcgcg ggccagttac
     1141 gccactggta gccgtaaacc gggcctaagt cgccgttttc gtccgcccac tcgtcccaaa
     1201 tggaaacatt gttgtccttt aggtatttga tattggtatc gcctttgaga aaccaaagca
     1261 gctcgtggat aatcgagcgc aaatgcagct ttttggtcgt cagcagcgga aaacctttgc
     1321 ccaagtcaaa acgcatctga taaccgaata cggagcgcgt gcccgtaccg gtgcggtctg
     1381 atttgtccgt accgttgtcg aggacgtggc gcatcaagtc caaataggcc ttcatcatca
     1441 tctttcatca aattaaacgg cgcatattgt aacatttccg gccaacgccc gagtccggac
     1501 aaacgcacac gccgccccgc cggacgataa aaacgcagat acaggcaggc aggattgttg
     1561 gcaatttcag tccttttcca cagtaaaacc cagtgggaaa acaaaattac cttgattgga
     1621 atcaaaaaat ctagtttaat tacttagaat aaaatttcaa taatattttt atttacgaaa
     1681 ttaatttatg attattgatt aattatcggc aacaaacatc aaacatcgaa aacatggaaa
     1741 aaataatgtc aacaattttt gccaaatcgg gcttggcatc agaaaaaaat aggtttatat
     1801 tcccacctac aaatttgttt tcccattagt acactatcaa ccaaaaggag tatccgaatg
     1861 actgacctga acaccctgtt tgccaacctc aaacaacgca atcccaatca ggagccgttc
     1921 catcaggcgg ttgaagaagt cttcatgagt ctcgatccgt ttttggcaaa aaatccgaaa
     1981 tacacccagc aaagcctgct ggaacgcatc gtcgaacccg aacgcgtcgt catgttccgc
     2041 gtaacctggc aggacgataa agggcaagtc caagtcaacc ggggctaccg cgtgcaaatg
     2101 agttccgcca tcggtcctta caaaggcggc ttgcgcttcc atccgaccgt cgatttgggc
     2161 gtattgaaat tcctcgcttt tgaacaagtg ttcaaaaacg ccttgaccac cctgcctatg
     2221 ggcggcggca aaggcggttc cgacttcgac cccaaaggca aatccgatgc cgaagtaatg
     2281 cgcttctgcc aagcctttat gaccgaactc taccgccaca tcggcgcgga caccgatgtt
     2341 ccggccggcg acatcggtgt aggcgggcgc gaaatcggct acctgttcgg acaatacaaa
     2401 aaaatccgca acgagttttc ttccgtcctg accggcaaag gtttggaatg gggcggcagc
     2461 ctcatccgtc ccgaagcgac cggctacggc tgcgtctatt tcgcccaagc gatgctgcaa
     2521 acccgcaacg atagttttga aggcaaacgc gtcctgattt ccggttccgg caacgtggcg
     2581 caatacgccg ccgaaaaagc catccaactg ggcgcgaaag tgctgaccgt ttccgactcc
     2641 aacggcttcg tcctcttccc cgacagcggt atgaccgaag cgcaactcgc cgccttgatc
     2701 gaattgaaag aagtccgccg cgaacgcgtt gccacctacg ccaaagagca aggtctgcaa
     2761 tactttgaaa accaaaaacc gtggggcgtc gccgccgaaa tcgccctgcc ctgcgcgacc
     2821 cagaacgaat tggacgaaga agccgccaaa accctgttgg caaacggctg ctacgtcgtt
     2881 gccgaaggtg cgaatatgcc gtcgactttg ggcgcggtcg agcaatttat caaagccggc
     2941 atcctctacg ccccgggaaa agcctccaat gccggcggcg tagcaacttc aggtttggaa
     3001 atgagccaaa acgccatccg cctgtcttgg actcgtgaag aagtcgacca acgcctgttc
     3061 ggcatcatgc aaagcatcca cgaatcctgt ctgaaatacg gcaaagtcgg cgacacagta
     3121 aactacgtca atggtgcgaa cattgccggt ttcgtcaaag ttgccgatgc catgctggcg
     3181 caaggcttct aagcaaacgc cgccgctccg caaacaaaat gccgtccgaa ccgcaaatgc
     3241 tgttcagacg gcatttcatt atccgcccgt tcgaatcggg tgatactatt tgtatccaga
     3301 attgttggat agtttgggag tggagaggaa gaaatgatta tggaccaata ctatatggag
     3361 ttaaagaata agttatctaa cagaccaatc ctactggata atactaatga ttttcttttt
     3421 gttttagtaa atacagtgaa agctatgata gaaaatactg ataaaagtca gctttcagag
     3481 ttagataaaa ttttagacgg tgtcacaagt caagaattga aacttgccta tgatttttgt
     3541 caagggaaat tcggtcaagc aggtttttct tatcgtaggc acccgaatta tttttatttg
     3601 tccagtttaa ttgcgacttt tccagaattt gagttgtcta aagcagaccg agattacctc
     3661 aaaggaatca taaattttga taactacctt ttatatgagt tagattagtc tttaatcacc
     3721 tcaaaaccct atttattcaa aaggagaaaa aatgattgag ctgaaattag tagatgagag
     3781 cagttttcag gcagtgctgg atttgaaaat atctgaagct gatgaacgag cacgttttgt
     3841 ggctccaaat gtacgctctt tagctgacgc atggctctac cgggaaaatg aagatgtgtt
     3901 tccgagggca atctattggg ataagcaagt ggttggcttt ctcctgctgg aaatagacaa
     3961 ggatgaagca gaatacttta tctggcggat aatgattggt cagcagtgaa ttaacaaaaa
     4021 tcaggacaag gcggcgagcc gcagacagta ca
//
LOCUS       DBBZXW010000134         4004 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.134, whole genome shotgun sequence.
ACCESSION   DBBZXW010000134 DBBZXW010000000
VERSION     DBBZXW010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4004
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.134"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            218..1093
                     /gene="dapA"
                     /locus_tag="ACJJD2_001957"
     CDS             218..1093
                     /gene="dapA"
                     /locus_tag="ACJJD2_001957"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HGG7580424.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADFTLS
                     VVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARKLNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            1102..2298
                     /gene="bamC"
                     /locus_tag="ACJJD2_001958"
     CDS             1102..2298
                     /gene="bamC"
                     /locus_tag="ACJJD2_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HGG7580425.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTLIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGSLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKNPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2355..3287)
                     /gene="pip"
                     /locus_tag="ACJJD2_001959"
     CDS             complement(2355..3287)
                     /gene="pip"
                     /locus_tag="ACJJD2_001959"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HGG7580426.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIRKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIRNIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLADALVQAVEDILPRLL"
BASE COUNT         1080 a         1284 c          881 g          759 t
ORIGIN      
        1 ccgtactggt ttttgttaat ccactataaa tccgacggca ccggcataaa ccggcgaata
       61 taataaaatg atttcaaaca ggaaaaatca atttccacca tacctttcgg cgcaaacgcc
      121 ccacatctgc aacccgccgg atttcacacc tgcggtaaag taggctacaa tcagaagcat
      181 taccgccccc tacaccacaa ctgataaaag gttctgtatg ttacaaggta gcctggttgc
      241 cctgattacc ccgatgaatc aagacggcag catccattac gaacaactcc gcgatttgat
      301 cgactggcac attgaaaacg gcacggacgg catcgttgcc gtcggcacga caggcgaatc
      361 cgccaccctc tccgtcgaag aacacaccgc cgtcatcgaa gccgtcgtca aacacgttgc
      421 caaacgcgtc cccgtcatcg ccggcacagg ggcaaacaac accgtcgaag ccatcgccct
      481 ttcccaagcc gccgaaaaag ccggtgcaga cttcactctc tccgtcgtcc cctattacaa
      541 caagccctcc caagaaggca tttaccaaca tttcaaaacc atcgccgaag ccacttcgat
      601 tccgatgatt atctacaacg tgcccggccg taccgtcgtc agcatgacta acgacactat
      661 cctgcgcctt gccgaaatcc ccaacatcgt cggcgtgaaa gaagccagcg gcaacatcgg
      721 cagcaacatc gaactcatca accgcgcgcc cgaaggcttc gtcgtccttt ccggcgacga
      781 ccataccgcc ctgccgttca tgctgtgcgg cggacacggc gtgattaccg tagccgccaa
      841 cgccgcaccc aagctctttg ccgatatgtg ccgcgccgcg ctgcaaggcg acattgccct
      901 cgcacgcaag ctcaatgacc ggctgattcc gatttacgac accatgttct gcgaacccag
      961 ccccgccgca ccgaaatggg cggtatccgc cctgggcaga tgcgaaccgc acgtccgcct
     1021 gccgctcgtt ccgctgacgg aaggcggaca ggcaaaagtc cgcgccgccc tgaaagcctc
     1081 aggacaactc taaatataac tatgccgtct gaaccgttcg gacggcataa cgcaacaaac
     1141 actttaatat ccatcacaca ggatgacacg atgaccctta tcaaacccgt cattgccgcg
     1201 ctcgcactca tcgggcttgc cgcctgctcc ggcagcaaaa ccgaacagcc caagctcgac
     1261 taccaaagcc ggtcgcaccg cctgatcaaa cttgaagtcc cacccgattt gaacaacccc
     1321 gaccaaggca gcctctaccg cctgcctgcc ggttcgggag ccgtccgcgc cagcgatttg
     1381 gaaaaacgcc gcacacccgc cgtccaacag cctgccgatg ccgaagtatt gaaaagcgtc
     1441 aaaggtgtcc gcctcgagcg cgacggcagc caacgttggc ttgtcgttga cggcaaatcc
     1501 cctgccgaaa tctggccgct tctgaaagcc ttttggcagg aaaacggctt cgacatcaaa
     1561 tccgaagaac ccgccatcgg acaaatggaa accgagtggg cggaaaaccg tgccaaaatc
     1621 ccccaagaca gcttgcgccg cctattcgac acagtcggtt tgggcggcat ctactccacc
     1681 ggcgagcgcg acaaattcat cgtccgtatc gaacagggca aaaacggcgt ttccgacatc
     1741 ttcttcgccc acaaagccat gaaagaagtg tacggcggca aagacaaaga cacgaccgta
     1801 tggcagccct ccccgtccga tcccaacctc gaagccgctt tcctgacgcg ctttatgcaa
     1861 tatttgggcg ttgacggaca gcaggcggaa aacgcatcgg caaaaaaccc gaccctgccc
     1921 gccgccaacg aaatggcgcg tatcgaaggc aaaagcctga ttgtctttgg cgactacggc
     1981 agaaactggc ggcgcaccgc gctcgccctc gaccgcatcg ggctgaccgt cgtcggtcaa
     2041 aacaccgaac gccacgcttt cctggttcaa aaagccccga acgaaagcaa tgcagttacc
     2101 gaacaaaaac ccggcctgtt caaacgcctg ctgggcaaag gcaaagcgga gaaacctgcc
     2161 gaacagccgg aactgattgt ctatgccgag cctgtcgcca acggctcgcg catcgtcctg
     2221 ctcaacaaag acggcagcgc atatgccggc aaagacgcat ccgcattatt gggcaaactc
     2281 cattccgaac tgcgttaaac cattcaaaac aaaagcagct tccaaacaga agctgctttt
     2341 ttatgcggaa ctttttacaa caaacggggc aaaatatcct caaccgcctg aaccagcgca
     2401 tccgccaaag gcggatcgaa cgcacgatgc cctgcctgaa ccaccctcaa ttccgcttcc
     2461 ggaaaggctt tcgacagcgc ccacgcactc tgcatcggcg tacacaaatc ataccgcccc
     2521 tgcacgataa tggtcgggat attccgtatt ttgccgatat tgttcaaaat cgccctatcg
     2581 ccctgcaacc agccgccgtt gacaaaataa tggttttcca aacgcgcgat tgccagcgag
     2641 gcataagcat cttcatccac ttcctccggc tcgaaacgga tcagatagct ttcccaatcc
     2701 gcccaagcct ttgcggcaga caggcacact tcttcatctt gatgaaacag caacccgtga
     2761 tacgcctcaa tcagccggtt ccgtcgattt tcagcaatcg gcgcgacaaa tttttgccat
     2821 tgttccggat aaatccggct cacaccgccc gcctcgttca gccacgccgt ttcagacggc
     2881 ctgcacaaaa atatcccgcg caataccaat ccctttaccc gttcaggatg ggtttgggca
     2941 taagccagcg acaaagtgct gccccacgaa ccgccgaaca ccagccattt cctgataccc
     3001 agcatttcac ggactttttc aatatccgcc accaaatccc aagtcgtatt gtcttccgca
     3061 caagcatacg ggcgcgaacg tccgcaaccg cgctggtcga tgatgacgat gcggaacaca
     3121 tcgggattga aaaaaccccg acattcaggc gaagcccccg cgcccggccc gccatgtaaa
     3181 aaaataaccg gcacaccgtc gggattgccc gattcctccc aataaatttg atgaatttca
     3241 gacacctgca agtatccgct atgaaaaggc tgttttatct catacatcat cttctcccat
     3301 attgcttctg acaatccgaa cattcccaca cgcaacatca cgcacgagac acaagccgcc
     3361 ccgaaaggca aatgccgaaa aatcgcgata tagtgaatta acaaaaatca ggacaaggcg
     3421 gcgagccgca gacagtacgg atagtacgga accgattcac tcgtgcttaa gcaccttaga
     3481 gaatcattct ctttgagcta aggcgaggca acgccgtacc ggtttttgtt aatccactat
     3541 aacagcaacc ctgtcgccgt cattcccgca aaagcgggaa tctagaaatg aaaagcaaca
     3601 ggcatttatc ggaaataact gaaaccgaac agactagatt cccgcctgcg cgggaatgac
     3661 gaatccatcc gtacggaaac ctgcaccacg tcattcctaa gaacctacat cccgtcattc
     3721 ccacaaggac agaaaaccaa aaacagaaac ctaaaatccc gtcattcccg cgcaggcggg
     3781 aatctaggtc tgtcagtgca ggaacttatc ggataaaacg gtttcttgag attttacatc
     3841 ctggattccc actttcgtgg gaatctagaa tctcggactt tcagataatc tttgaatatt
     3901 gccgctgcct taaggtctag attcccgcct gcgcgggaat gacaattcat aagtttcccg
     3961 aaattccaac ataaccgaaa cctgacaata accgtagcaa ctga
//
LOCUS       DBBZXW010000135         3990 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.135, whole genome shotgun sequence.
ACCESSION   DBBZXW010000135 DBBZXW010000000
VERSION     DBBZXW010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.135"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(1169..1606)
                     /gene="rnhA"
                     /locus_tag="ACJJD2_001960"
     CDS             complement(1169..1606)
                     /gene="rnhA"
                     /locus_tag="ACJJD2_001960"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HGG7580427.1"
                     /translation="MDKTVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            1720..2589
                     /gene="tehB"
                     /locus_tag="ACJJD2_001961"
     CDS             1720..2589
                     /gene="tehB"
                     /locus_tag="ACJJD2_001961"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HGG7580428.1"
                     /translation="MKEWIVGQSGELFCFGQMPVWKAENLPEVLLSGYSSEGGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSMYCVAEDYFH
                     KKYGMSATHSAVAAAQDIVPAGRALDMGCGQGRNALFLGLKGFEVTAVDHNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKRPE"
     gene            complement(2639..3445)
                     /gene="thiD"
                     /locus_tag="ACJJD2_001962"
     CDS             complement(2639..3445)
                     /gene="thiD"
                     /locus_tag="ACJJD2_001962"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HGG7580429.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGSDVCEAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT          847 a          995 c         1125 g         1023 t
ORIGIN      
        1 ggtttttgtt aatccactat agtttaattt gtctgtccgc attgccgcta attgtaccac
       61 ttcatcgtat ttccttttcg gttgaaaccc cgccctttag ggcggcagga tcagacttta
      121 tttgggaggg ggtgtaaccc cttccaaatc aggacgacac atagggaggt gctttatgtg
      181 tcgtcctgtg tgttgaaata tatcggacgc gtttgaacag ttgtgcggca aactgtttta
      241 gcggcaggca agagatgccg tctgatgccg tctgaagccc attgtccgtc attcccacac
      301 aggcagttgc tacggttgct gaagcccctt agccgtcgcg caggcggttg ctacggttac
      361 taaaatcccg tcattcccgc gcaggcggga atccagtccg ttcggtttca gttgtttctg
      421 ataaatcttg cagcgttggg tttttagatt cccgctttcg cgggaatgac ggggcggtcg
      481 gatgccgcct gaaactccgt cattcttgca acttttcgtc attcccgtga aagcgggaat
      541 ctagaccttt taaattttca cacggctttt gaatattgcc gttacccgaa ggtctagatt
      601 cccgcttgcg cgggaatgac ggtagagcgg tttcagttgc tcccgataaa tgccgcaatc
      661 tcaaatcccg tcattccctc aaaaacagaa aaacaaaatc agaaacctaa aatcccgtca
      721 ttcccgcagc tcttcgtcat tcccgtgaaa gcgggaatct agacctttta aattttcaca
      781 cggcttttga atattgccgt tacccgaagg tctggattcc cgcctgcacg ggaatgacgg
      841 cagagcggtt tcagttgttt ctaaataaat ttttgcagcg ttggattttt agattcccgc
      901 tttcgcggga atgacggggc ggtcggatgc cgcctgaagc ccgacaaagc ccccaatgcc
      961 gtctgaaacc tcgtcattcc tctgctgtcc gcaacttttc gtcattcccg caaaagcggg
     1021 aatctagagc ctctaaattt tcagacggct tttgaatatt gccgttgccc gacggtttgg
     1081 attcccgcct gcgcgggaat gacggtggag gacgatgccg tctaaagccc attagcggtt
     1141 tcagacggca tttttgccgg agcggcagtc aggaaaactg cgctgcgcca cggtttgcca
     1201 aatcgtcggc gcgttcgttt tccgcgtgtc ccgcgtgtcc tttaacccaa gtccagctga
     1261 cttggtgctg cccaaccaga acgtcgagtt ctttccacaa gtcgtcgttt ttgacgggct
     1321 gtttggcggc ggttttccag ccgttgcgct tccaaccgtg tatccagttt tccatgccgt
     1381 ttttgacgta ttgcgagtcg gtgcagatga tgacggtgca gcggcgtttg agcgatttca
     1441 gtccttcgat gacggcggtc agctccatgc ggttgttggt ggtttgcgct tcgccgccga
     1501 aaagttcttt ttcgcggctg ccgtagcgca tcaacacgcc ccagccgccc gcgccgggat
     1561 tgcctttgca cgcgccgtcg gtgtaaaggt aaacggtttt gtccattatt gtgcctttgt
     1621 gtggtgtccg gcgtgattat aagcggtttg tgcgccgtgc cgtctgaaag attgcggcgg
     1681 attaaaatag gcatataatg tgcaacttta tttttgaata tgaaggagtg gatagtgggt
     1741 caaagcggcg agttgttttg tttcggacag atgcccgtat ggaaggcgga aaacctgccg
     1801 gaagttttgt tgtcgggcta ttcgtccgaa ggaggggaat gggtctgcct gaatgtgttg
     1861 cagggcgatg tcgaagtccg cacgcaggac ggggcggcgg aggtttggtc ggcagaaagc
     1921 ggcgattgcg tgtttgcgcc gcagcaggtg ttttcggtca aaccgaaaac ggacgatgcc
     1981 gaaatccgtt tgtcgatgta ttgtgtggcc gaagattatt tccacaaaaa atacggcatg
     2041 agtgccacgc attctgcagt ggcggcggct caggatatcg tacctgcggg cagggcgctc
     2101 gatatgggct gcgggcaggg gcgcaacgcg ctgtttctcg gtttgaaggg gtttgaagtt
     2161 actgcagtcg atcacaatcc cgccgccttg gcaaacgtgg cggagctggc agaggcggag
     2221 ggtttgaacg tccgcacgct ggaatatgat ttgaacgccg ccgccttgca gggcgagttt
     2281 gattatattg tggcaacagt ggtgctgatg ttcctgatgc cgcagcgcgt acccgacgtg
     2341 attgccgata tgcaggcgca tacggcggcg ggcgggtaca acttgattgt atcggcaatg
     2401 gatacggcgg atttcccctg cccgatgccg ttccccttca aatttaaaga gggagaactg
     2461 aaggattatt atcgggattg ggagctggtc gaatataaag aagaattggg cgcgatgcac
     2521 gccaaagacg aaaacggcaa tccgatacgg tttaaatttg taaccatgct ggcgaaaagg
     2581 cctgaataat cttcaaaaat gccgtctgaa cattttgttt cagacggcat ttttacggtt
     2641 agtcccgata cgcccaatga ttgaccggcc cgtgtcccgc gccgatttcc aaagggtttg
     2701 agattgccgc cgtgatatag gccttggcag tctgtacggc ttcgcaaacg tccgagcctt
     2761 ttgccaattc agcggtaatg caggcggaaa acgtgcagcc tgtgccgtgc gtgtgggcgg
     2821 tcggaaagcg cgggctgtcc aattccagcg tttcgttttg cgtaaacagc caatccgtgc
     2881 agcgtccgct gctgctgccg ttcaaatgtc cgcctttgat aacgacattt ttgacaccgt
     2941 aatcaagcag gatttttgcc gcacgttccg catctttacg gttttcgata tgcacgccgg
     3001 tcagggcttc cgcctcgggc aggttggggg tcaatacatc cgtatcggga agcagcaggc
     3061 gcgtcagtgc cgcaacggcg gaatcctgca acagcggcgc accgcctttg gcaatcatca
     3121 cagggtcgag tacgcgcctg ccgaagtcac agtgtttcag cttgtcggca acgcattcga
     3181 tgatttccgc cgtgccgagc attcctattt tgtaggcgcg gatgtcaaag tcttccctga
     3241 ttgcttggat ttgtgcggtg atggtttcgg tcgggacgag atgaaccgcc gacacgccca
     3301 aggtattttg cgcggtaacg gcggtgatga cgcacgttcc gaacacgccg cgcatctgaa
     3361 acgttttcaa atccgcctga atgcccgcac cgccgcccga atccgaaccg gcgatggtaa
     3421 gcgtttgcac aaaagagctt ttcatttgtt cctccttaat attgtgtccg ataaaaaggg
     3481 ctaatgcctg taaaaaagca cggcgatgcc gtctgaaaac cgcagcgcgg ggtttgtggt
     3541 gcattatatg ccgtattgca ggacaaggca cagggcaggg cggcggggtg catcgtagca
     3601 actgtatttt tgcccgacgg ggtgaaaaat acagttgcta cacccactga taatgaaaaa
     3661 agagagcaat gccgtctgaa ccgcgtgttg cggcgagcat aaaccggcac gctttattcg
     3721 tcattcccac aaaaacagaa acctaaaatt ccgtcattcc tacgaaagcg ggaatccagt
     3781 gtgttcggtt tcagttgttt ttgggtttcg ggtgatttcc aaatcatcat tcccgcgcag
     3841 gcgggaatct agcccttggg gcagcggcaa tatttataaa gccgtctgaa aattcagaag
     3901 ttctagattc ccgttttcac gggaatgacg aagggttgtg ggaatgacga agtttcagac
     3961 ggcatcgccc cgccccgtca ttcccgcata
//
LOCUS       DBBZXW010000136         3864 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.136, whole genome shotgun sequence.
ACCESSION   DBBZXW010000136 DBBZXW010000000
VERSION     DBBZXW010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.136"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            418..762
                     /locus_tag="ACJJD2_001963"
     CDS             418..762
                     /locus_tag="ACJJD2_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HGG7580430.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGTSAPDFNAGG
                     TGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPRICIP
                     ETLQTQMTHTRI"
     gene            759..3620
                     /locus_tag="ACJJD2_001964"
     CDS             759..3620
                     /locus_tag="ACJJD2_001964"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HGG7580431.1"
                     /translation="MINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGY
                     NENYKNYTAYMRKEAPEDGDGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHI
                     IGGRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFG
                     TTSRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNML
                     FIFSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLS
                     APYEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIG
                     AVGVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKG
                     GSQLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIV
                     YLADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAG
                     YLNRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRG
                     NAARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMP
                     GIRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLD
                     HNGTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRSTW
                     SENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGT
                     LMQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGL
                     AGLKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVA
                     GLGADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1054 a         1048 c         1025 g          737 t
ORIGIN      
        1 tagcggatta acaaaaatca ggacaagaca acgaagccga agacagtaca gatagtacgg
       61 aaccgattca ctcggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcgagg
      121 caacgccgta ctggtttttg ttcatccact ataactaggg aaattcaaat taagttagaa
      181 ttatccctat gagaaaaagc cgtctaagcc ggtataaaca aaataaactc attgagctat
      241 ttgtcgaaag ttcaaatttc cattttaaaa caattagtaa aatcgagttt atcctagttg
      301 tccaagacaa cccctataat aatataattc aaaatataaa aacgggttac atctaaacat
      361 tacggaattt ttattccctc gcctgaattc tattgtcaga ttcaaggaga cctcatcatg
      421 cgaacgaccc caaccttccc tacaaaaact ttcaaaccgg ctgccatggc gttagctgtt
      481 gcaacaacac tttctgcctg cttaggcggc ggcggcggca cttctgcgcc cgacttcaat
      541 gcaggcggca ccggtatcgg cagcaacagc agagcaacaa cagcgaaatc agcagcagta
      601 tcttacgccg gtatcaagaa cgaaatgtgc aaagacagaa gcatgctctg tgccggtcgg
      661 gatgacgttg cggttacaga cagggatgcc aaaatcaatg cccccccccg aatctgcata
      721 ccggagactt tacaaaccca aatgacgcat acaagaattt gatcaacctc aaacctgcaa
      781 ttgaagcagg ctatacagga cgcggggtag aggtaggtat cgtcgacaca ggcgaatccg
      841 tcggcagcat atcctttccc gaactgtatg gcagaaaaga acacggctat aacgaaaatt
      901 acaaaaacta tacggcgtat atgcggaagg aagcgcctga agacggagac ggtaaagaca
      961 ttgaagcttc tttcgacgat gaggccgtta tagagactga agcaaagccg acggatatcc
     1021 gccacgtaaa agaaatcgga cacatcgatg tggtctccca tattattggc gggcgttccg
     1081 tggacggcag acctgcaggc ggtattgcgc ccgatgcgac gctacacata atgaatacgc
     1141 atgatggaac caagaacgaa ataatgtctg cagccatccg caatgcatgg gtcaagctgg
     1201 gcgaacgtgg cgtgcgcatc gtcaataaca gttttggaac aacatcgagg gcaggcactg
     1261 ccgaccattt ccaaatagcc aattcggagg agcagtaccg ccaagcgttg ctcgcctatt
     1321 ccggcggtga taaaacagac gagggtatcc gcctgatgca acagagcgat tacggcaact
     1381 tgtcctacca catccgtaat aaaaacatgc ttttcatttt ttcggcaagc aatgacgcac
     1441 aagctcagcc caacacactg accctattgc cattttatga aaaagatgct caaaaaggca
     1501 ttatcacagt cgcaggcgta gaccgcagtg gagaaaagtt caatggctcc aaccattgcg
     1561 gaattactgc catgtggtgc ctatcggcac cctatgaagc aagcgtccgt ttcacccgta
     1621 caaacccgat tcaaattgcc ggaacatcct tttccgcacc catcgtaacc ggcacggcgg
     1681 ctctgctgct gcagaaatac ccgtggatga gcaacgacaa cctgcgtacc acgctgctga
     1741 caacggctca ggacatcggt gcagtcggcg tggacagcaa gttcggctgg ggactgctgg
     1801 atgcgggtaa ggccatgaac ggacccgcgt cctttccgtt cggcgacttt accgccgata
     1861 cgaaaggtac atccgatatt gcctactcct tccgtaacga catttcaggc acgggcggcc
     1921 tgatcaaaaa aggcggcagc caactgcaac tgcacggcaa caacacctat acgggcaaaa
     1981 ccattatcga aggcggttcg ctggtgttgt acggcaacaa caaatcggat atgcgcgtcg
     2041 aaaccaaagg tgcgctgatt tataacgggg cggcatccgg cggtagcctg aacagcgacg
     2101 gcattgtcta tctggcagat accgaccgat ccggcgcaaa cgaaaccgtg cacatcaaag
     2161 gcgatctgca gctgggcggc gaaggtacgc tgtacacacg tttgggcaaa ctgctgaaag
     2221 tggacggtac ggcgatgacc ggcggcaagc tgtacatgtc ggcacgcggc aaaggggcag
     2281 gctatctcaa ccgtaccgga caacgtgttc ccttcctgag tgccgccaaa atcgggcggg
     2341 attattcttt cttcacaaac atcgaaaccg acggtggtct gctggcttcc ctcgacagcg
     2401 tcgaaaaaac agcgggcagt gaaggcgaca cgctgtccta ttatgtccgt cgcggcaatg
     2461 cggcacggac tgcttcggca gcggcacatt ccgcgcccgc cggtctgaaa cacgccgtag
     2521 aacagggcgg cagcaatctg gaaaacctga tggtcgaact ggatgcctcc gaatcatccg
     2581 caacacccga gacggttgaa actgcggccg ccgaccgcac agatatgccg ggcatccgcc
     2641 cctacggcgc aactttccgc gcagcggcag ccgtacagca tgcgaatgcc gccgacggtg
     2701 tacgcatctt caacagtctc gccgctaccg tctatgccga cagtaccgcc gcccatgccg
     2761 atatgcaggg acgccgcctg aaagccgtat cggacgggtt ggaccacaac ggcacgggtc
     2821 tgcgcgtcat cgcgcaaacc caacaggacg gtggaacgtg ggaacagggc ggtgttgaag
     2881 gcaaaatgcg cggcagtacc caaaccgtcg gcattgccgc gaaaaccggc gaaaatacga
     2941 cagcagccgc cacactgggc atgggacgca gcacatggag cgaaaacagt gcaaatgcaa
     3001 aaaccgacag cattagtctg tttgcaggca tacggcacga tgcgggcgat atcggctatc
     3061 tcaaaggcct gttctcctac ggacgctaca aaaacagcat cagccgcagc accggtgcgg
     3121 acgaacatgc ggaaggcagc gtcaacggca cgctgatgca gctgggcgca ctgggcggtg
     3181 tcaacgttcc gtttgccgca acgggagatt tgacggtcga aggcggtctg cgctacgacc
     3241 tgctcaaaca ggatgcattc gccgaaaaag gcagtgcttt gggctggagc ggcaacagcc
     3301 tcactgaagg cacactggtc ggactcgcgg gtctgaagct gtcgcaaccc ttgagcgata
     3361 aagccgtcct gtttgcaacg gcgggcgtgg aacgcgacct gaacggacgc gactacacgg
     3421 taacgggcgg ctttaccggc gcgactgcag caaccggcaa gacgggggca cgcaatatgc
     3481 cgcacacccg cctggttgcc ggtctgggcg cggatgtcga attcggcaac ggctggaacg
     3541 gcttggcacg ttacagctac gccggttcca aacagtacgg caaccacagc ggacgagtcg
     3601 gcgtaggcta ccggttctga cggacaggaa gcagacagcc gcaaagatca cggtctttgc
     3661 ggctgtttct tatgaaaaga aaaccctatt ccaattgcct gcttctattg tttcaagact
     3721 tcttccaaag attcggcatc aatcagatgt atagcggatt aacaaaaatc aggacaaggc
     3781 ggcgaagccg cagacagtac aaatagtacg gaaccgattc actcggtgct tgagcacctt
     3841 agagaatcgt ttctttgagc taag
//
LOCUS       DBBZXW010000137         3861 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.137, whole genome shotgun sequence.
ACCESSION   DBBZXW010000137 DBBZXW010000000
VERSION     DBBZXW010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.137"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="ACJJD2_001965"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="ACJJD2_001965"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HGG7580432.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="ACJJD2_001966"
     CDS             1439..1924
                     /locus_tag="ACJJD2_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HGG7580433.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACJJD2_001967"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACJJD2_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HGG7580434.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPDWD
                     AKIGNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVGTLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
BASE COUNT          787 a          937 c         1077 g         1060 t
ORIGIN      
        1 gaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cttcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcactgtatg ccggatatgg ttttatcatc agcccttttc ggttgaaacc
      241 ccgtcagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggt
      301 ggcgtgcagt gcggtgcttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggccaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataag
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgccga tgtcaaacct
      661 gaggacttgg cttggaaggt tttggccgtc aatatttcag atatggcggc gatgggcgcg
      721 ataccgcgtt gggtgttgtt aagtgcggct ttgcccgaat tggatgaggt atggctggaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcattgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgatgtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccgt ttgcccgggc ggcgcaggat gtttcagacg gcctcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaggttttag atgccgacgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgt ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgtgcctt cttcgccgag
     2041 tcggcgtttc ttgtcggctt cgtattcctg atagttgccg tcaaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccagc ggtcgtgcga
     2161 aatcaccatc acgctgccgg caaattccag caatgcgtct tccaacgcgc gcagggttcc
     2221 cacgtcgagg tcgttggacg gttcgtccag cagcaacaca ttgccaccgc ccaacaaggt
     2281 ttttgccaag tgcaaacgtc cgcgttcgcc gccggaaagc tgccccgtga ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgccc
     2401 gacctgtaaa atatcgcgac cttcggcaat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 agaatcgggc tgctctttgc ccgcaatcat tttaaacagt gtcgatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttgtcg ccgaacgatt tggaaacatt cacaaattca atcacttcgt tacccaaacg
     2701 ctcggcgacg ggaatgaaga tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcttca aaacgagcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgc gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgtgttacc gcaacgactg taccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 agattccgcg tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gtttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattgc cgattttggc
     3181 atcccaatca ggcaggcgca gcgcgtcggc ggcgatttcc agttcgtgtt ccgcaccgcc
     3241 gcccgtggac gaacctgccg cgataatcgc ttccaagcga ccttgttctt ccgccaatgc
     3301 gtcaaaatcc gcatcaggat tggcatactc ggcatacact tcttccaaac gtttttgtgc
     3361 ggcagccact tcgcccaaac cgctttccac ttcctcgcgc acggttttct caggatcaag
     3421 ctcaggctct tgcggcaaat agccgatttt aatgccgccc atcggcacgg cttcgccctc
     3481 aaattcttta tccacgcccg ccataatccg cagtacagta gatttacccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taatgatggt
     3601 tttctgcggc ggcacaacct tgctcacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgctta
     3781 tccctttgaa attatataga caaaaaaata ataatgatag gggatcgccg ccccggcaac
     3841 catttcggat tttccaaagc a
//
LOCUS       DBBZXW010000138         3857 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.138, whole genome shotgun sequence.
ACCESSION   DBBZXW010000138 DBBZXW010000000
VERSION     DBBZXW010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.138"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..274
                     /locus_tag="ACJJD2_001968"
     CDS             <1..274
                     /locus_tag="ACJJD2_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7580435.1"
                     /translation="NETTKGACKGFCYSHSSYFAEVPEQYQRDASGEYVIRDGKKVET
                     EAWKDYKSIWGEPTEKDENGKYINKYIPKLINPNKPNGEKYEDKPF"
     gene            255..563
                     /locus_tag="ACJJD2_001969"
     CDS             255..563
                     /locus_tag="ACJJD2_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580436.1"
                     /translation="MKINHFNIALLFVSTMMLTGCFGHCADFNCTRLDPRWVKAVDTC
                     ETKNLTIVLQVLGEDLGYKSLIEVQDSKIGQHISSQCIYHSGKYDIHKDKQYEHLFAK
                     "
     gene            911..2836
                     /locus_tag="ACJJD2_001970"
     CDS             911..2836
                     /locus_tag="ACJJD2_001970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580437.1"
                     /translation="MTVGYGFSAGGDYSQSKIRADHASVTEQSGIYAGEDGYQINVQN
                     HTDLKGGLITSTQKSEDDGKNTFSTGTLTFEDLANHAEYKGEAIGLGVSGSVAGDNPN
                     QNSRIYTVNQSGMSSTMGYGKDSDKQYATTHSGINTANITIRDNEKQQQITGISAEEA
                     KRAVKADVTTDNYAEHSGSLKNNFDKDKVQSEIDLQVKVTQEFDSNRKALRAEINKAA
                     DEKRQKAEDIRRENYIDGKNGYNTAESLALDKSADKLEKVAFYTDLALGGLYGIGDST
                     ALTYVTGSAVANPAIRAGTRPRQFWFEKCDGDSLYCSNRNYDDTADRKIYDKNGQEID
                     TKDPNYTGMVEIGDKRQISDLNEIEPNKVTGSIVTTNDGILNPRNDALKNGIKQQKWE
                     VDKEGILLIYNPPTGNSISELLYAAYDKTNDLLGGRLPLASAQKANLELNQYAESKGY
                     KIDSNNHSRGGLTRSVSDKYSVRHNLPLPYNNVQFFGSAANVDDYTNYMNEYGRKDFN
                     ISATTHYTDFVGRTPLVALRSKHIVGGNEPTGGVEDKWFLYSHSSYFAEKPTPYLVNE
                     HGFYMDKNGDLIKDNSGNPIKMTEENKLEYSTKVPNPYLDDFEQKWIKGQTHNKVSGD
                     NPSLPVPVRTKKQQGER"
     gene            2836..3267
                     /locus_tag="ACJJD2_001971"
     CDS             2836..3267
                     /locus_tag="ACJJD2_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580438.1"
                     /translation="MKKYFFSVCLLLTGCGVLFDDPLTRFWNGGYFLFPDKEIASDGI
                     YKTSDTDLHYYESLSLEQRKRYLKFKPIKDKCEHKYSDRTKYDYATQMANIVRCFNEQ
                     GYQSETAFILNGHTITQKGSICTKDEPKQCDNVMRSYIVLF"
     gene            3309..3560
                     /locus_tag="ACJJD2_001972"
     CDS             3309..3560
                     /locus_tag="ACJJD2_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580439.1"
                     /translation="MKPIYFIIFSFLLTACVVNNDDYFAEPPTPYLINEHGFYMNKKG
                     DLIRDSHGNAIKMTEENKHNFPKESANPYYEKWIKQKRK"
BASE COUNT         1416 a          659 c          782 g         1000 t
ORIGIN      
        1 taatgagaca acaaaaggag cttgtaaggg attttgctat tcgcatagca gttattttgc
       61 ggaagtgcct gaacagtacc aaagggatgc gagcggagag tatgttatta gagatggtaa
      121 aaaagttgag acagaagctt ggaaagatta taagtcaata tggggcgaac cgaccgaaaa
      181 agatgaaaat ggtaaataca tcaacaaata tattcctaaa ttaatcaacc caaataaacc
      241 aaatggagaa aaatatgaag ataaaccatt ttaatatagc attacttttt gtttccacca
      301 tgatgctaac aggatgtttt ggtcattgtg cggattttaa ttgcacgaga ctcgatccac
      361 gctgggtaaa agcagttgat acatgtgaaa ctaaaaatct cacaatagtg ttacaagtat
      421 taggggaaga tttaggatac aaatctctca ttgaggtaca agacagtaaa attggtcaac
      481 acatttcttc tcaatgtatt taccatagcg gtaagtatga tattcataaa gataagcagt
      541 atgagcattt gtttgcaaaa tgatattacg ccaatgtttt acagaaaaac ggctatacct
      601 atacgggtgc ggacggcaaa acttataatt cgattgtgca taataaggat tttgtggaga
      661 acaaagggat acctttcttg ctagaaacca atgacaccac acaaggtata tgtaagggat
      721 tttgctatcc gcatagcaat tattttacgg aagtgcctga acagcaccaa aaggataaga
      781 atgggaatat tgttaaaaag aatggtgaac ctgcatcaaa ggcgtacaag tcaatgccaa
      841 aaacctaagt attcaaagcg tacaagatag agaaacttat caaagcaaac aacaaaacgc
      901 cagtgcacaa gtgaccgtag gctacggctt cagtgccggt ggcgattaca gccaaagcaa
      961 aatccgagcc gaccatgctt cggtaaccga gcaaagcggt atttatgccg gagaagacgg
     1021 ttatcaaatc aatgtgcaga accacaccga tttgaaaggc ggtttgatta cttccaccca
     1081 aaaatcggaa gacgatggca aaaacacatt ctcaacgggt acgctcacct ttgaagacct
     1141 agcgaatcac gccgaatata agggtgaagc gattggtttg ggtgtttcag gcagcgttgc
     1201 gggcgataat ccaaatcaaa acagccgtat ttataccgtt aatcaaagcg gtatgagtag
     1261 cacaatgggc tatggcaaag acagcgacaa acaatacgcc acaacccatt caggcattaa
     1321 cactgccaat atcaccattc gtgataacga aaaacaacag caaatcacag gaatatcggc
     1381 ggaagaagcg aaacgggctg ttaaagccga tgtaacaacc gacaactacg ccgaacattc
     1441 aggcagcctg aaaaacaatt tcgataaaga caaagtgcaa tcagagattg atttgcaggt
     1501 taaggttaca caggagtttg atagtaatcg caaagccttg cgtgcagaaa tcaacaaagc
     1561 agcagatgaa aaaagacaaa aagccgaaga tataagaaga gaaaattata ttgacggcaa
     1621 aaacggttat aacaccgcag aatctttggc tttggataag tctgccgaca aattggaaaa
     1681 agtcgctttt tacactgatt tggcattagg tggattgtat ggaattggcg atagcacggc
     1741 tttaacttat gtaacaggta gtgcagtggc taatccagcc attcgagcgg gtacaagacc
     1801 aagacagttt tggtttgaga aatgtgacgg cgatagtttg tattgttcta atagaaatta
     1861 tgacgatacg gcggatagaa aaatttatga taaaaacggg caagaaattg acactaaaga
     1921 tccaaattac actggaatgg ttgagattgg tgataaacgg caaatctctg atttaaatga
     1981 gattgaacct aacaaagtaa ctggaagcat cgttactaca aatgacggta tattgaaccc
     2041 acgaaatgac gctctcaaaa atgggattaa gcaacaaaaa tgggaagtag ataaggaagg
     2101 tattttgctt atctacaatc cgccaacagg caattctatt tctgaacttt tgtatgccgc
     2161 ttatgataaa actaacgatt tgttaggcgg tcgtttgcct ttagcttctg cacaaaaagc
     2221 gaaccttgaa ttaaatcaat atgcagaaag taaaggttat aagattgata gtaacaatca
     2281 tagtcgtggc ggtttaactc gaagtgtttc tgataaatat tcagtcagac ataatctgcc
     2341 tttaccgtat aacaatgttc aattcttcgg tagtgcggca aatgtagatg attacacaaa
     2401 ctacatgaac gaatatggta ggaaagattt taatatttct gccacaacac attacacaga
     2461 ttttgttggt agaactccat tagttgcatt gcgtagtaag catattgttg gtggaaatga
     2521 accaacaggc ggagttgaag ataaatggtt cttatattcg cacagcagtt attttgcaga
     2581 aaaaccaacc ccataccttg taaatgaaca cggtttttat atggataaaa atggcgacct
     2641 gataaaagat aattcaggaa atcctataaa aatgacggaa gaaaataaat tggaatattc
     2701 aacaaaagtt ccaaatccat atttagatga ttttgaacag aaatggataa aaggacaaac
     2761 tcataacaag gtgtcaggtg ataatccgtc tcttccagtt ccagttagaa caaaaaaaca
     2821 acagggagag cgataatgaa aaaatacttc ttttcagtct gcttgttatt aacaggctgt
     2881 ggggttttgt ttgatgaccc actaacaaga ttttggaatg gcggttattt tttgtttcca
     2941 gacaaagaaa tagcaagtga tggaatttat aaaacttcgg atactgactt gcattattac
     3001 gaaagtttgt cgcttgaaca aagaaaacgc tatctaaaat ttaagcctat taaggataaa
     3061 tgcgaacata agtattcaga tagaacaaaa tatgattacg ctacacaaat ggcaaatatc
     3121 gttaggtgtt ttaatgaaca aggctatcaa tctgaaactg cttttatatt gaatggacat
     3181 acaataactc aaaaaggtag tatttgcaca aaagatgaac ccaaacaatg cgataatgtt
     3241 atgcgtagtt atatcgtttt attttaattg aaatgcaact tgaaaattga caatacagga
     3301 gcaacaaaat gaaaccgatt tattttatta ttttttcttt tttattaact gcttgcgtgg
     3361 ttaataatga tgattatttt gctgaaccgc ctacaccata cttaattaac gaacacggtt
     3421 tttatatgaa taaaaaaggt gatttaatta gagatagtca cggtaacgca attaaaatga
     3481 cagaagaaaa taaacacaat ttccccaaag aatccgctaa tccttattac gaaaaatgga
     3541 taaaacaaaa acgaaaataa ataacaaagc aaacatagtg taggcaactt gttgcccacg
     3601 cgttaatgat aactttcagg cagcctgaaa gcctaaaacc acaaggaaag ctccaaaaat
     3661 gaacaaccgc ttacacaaag tcatcttcaa ccgcaacaca gcaagcgtag ggtgggcaac
     3721 ttgttgccca cgcagttcaa tcagatacac ataaaatgat gttttaatgt gaaatatttg
     3781 atttcaggct gtctgaaaaa taaaatgatg tggtgtgcat caaaccgcgt gggcaacaag
     3841 ttgcccaccc tacgctt
//
LOCUS       DBBZXW010000139         3843 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.139, whole genome shotgun sequence.
ACCESSION   DBBZXW010000139 DBBZXW010000000
VERSION     DBBZXW010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.139"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..2076
                     /locus_tag="ACJJD2_001973"
     CDS             <1..2076
                     /locus_tag="ACJJD2_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HGG7580440.1"
                     /translation="GKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGG
                     ESNTLTGLYFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMNPE
                     GAVSGSVNIETKKAADEGNRKIGLGRFSNNRAQGTFDLGQRFGENKAFGVRANGKLRH
                     GDTPRHGYSEDNKEFAVNADYRGETLRVAFDSIYAKRKTNGGRARMQDIQNAGGRLFG
                     APDGKTNLLPSWNWQNTAGQTNMLTFEWDAFDNAQITGGIGYNKARYYGTLISPTVCL
                     NATSTCTDMQNTNASGKVTARNYDYNTGTARLTDQYFRTLSMNLSARGEFETGPVTHN
                     WSTAFDRVIRQRKTINGSGNGNSKIEVKANENIANQLASFTADYPNSWENSANLDANI
                     KVNSLALSDTLGFVDNKYRLTLGERFQTVEYTDKKSQSGDAKRFSPMLMAAWVPQPDL
                     VVYGNYMEDLEPADIKTDDSGETTMAKPRVSRQFEVGVRKNWGDFVTTLNAFQIKRPG
                     YWRGNTKKGTDFAAYKAAGGADGDEQGMERSRGIEFNAYANLLNKTLRPTFGLMYLQS
                     TVKDYPNSRDMLVNGVQVANPRVIAKAGLEWDTPFAKGLTLNSNVSYFGKSYQDTQKQ
                     YAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQRGQYDRSFAVVGLPRT
                     YWLKAELDF"
     gene            2200..3750
                     /locus_tag="ACJJD2_001974"
     CDS             2200..3750
                     /locus_tag="ACJJD2_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HGG7580441.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNAQKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGNEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTQPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
BASE COUNT         1087 a          950 c          968 g          838 t
ORIGIN      
        1 ggcaaagcca acgcctttac cgcgccgatt accgtcgtca actacgacga acaagccctc
       61 aacaacaccg aagcgcgtac tttggtggat gccgtagcga aaaaagacgc ttccgtttgg
      121 cagttcggcg gagaaagcaa cacgctgact ggactgtatt tcagaggtta tcagcttgat
      181 gcgcgccaat tcagcgtcaa cggtttggca ggtatgtacg gcacgcaagg cacggccagc
      241 gtgcaagtcg gctccgcaca actgattaaa ggcgcgtcca ccgccgtaaa cggcatgaac
      301 cctgaaggtg cggtatccgg ttccgtcaat atcgaaacca aaaaagccgc cgatgaaggc
      361 aaccgcaaaa tcggtttggg ccggtttagc aacaaccgcg cccaaggtac gttcgatttg
      421 ggtcaacgct tcggcgaaaa caaagcattc ggcgtacgcg ccaacggcaa actgcgccac
      481 ggcgacactc cgcgccacgg ttacagcgaa gacaacaaag aatttgcggt aaatgccgac
      541 tatcgcggcg aaacactgcg cgtagcgttc gattccatct acgcaaaacg caaaaccaac
      601 ggcggtcgcg cgcgtatgca ggacattcaa aacgccggcg gacgcttgtt tggcgcgccc
      661 gatggtaaaa ccaacctgct gccttcttgg aactggcaaa ataccgccgg ccaaaccaat
      721 atgcttacgt ttgaatggga tgcgtttgat aatgcacaga ttacaggcgg tatcggctac
      781 aacaaggcac gctattacgg cacgctgatt tccccgaccg tatgtttgaa tgctaccagc
      841 acttgtaccg atatgcaaaa cacaaacgcc agcggcaaag taacggcacg caactatgac
      901 tacaataccg gtactgcgcg cctgaccgac caatacttcc gcactttaag catgaacctg
      961 tctgcgcgag gcgaatttga aaccggcccg gtaacacata actggagtac ggctttcgac
     1021 cgcgttatcc gccagcggaa aaccataaac ggcagcggga acggcaacag caagatagaa
     1081 gtgaaggcaa acgaaaatat tgcgaatcaa ttggcatcgt ttacagccga ctatcccaat
     1141 tcttgggaga actctgccaa cttggatgcc aatatcaaag tcaacagcct ggctttgtcc
     1201 gacaccttgg gcttcgtgga taacaaatac cgcctgactt tgggcgaacg tttccaaaca
     1261 gtcgaatata ccgacaaaaa atcacagagc ggcgatgcca aacgtttcag cccgatgctg
     1321 atggcggcgt gggtgccgca acctgatttg gttgtgtacg gcaactatat ggaagacttg
     1381 gagcctgccg acattaaaac cgatgattcc ggtgaaacga caatggcgaa accgcgcgtc
     1441 agccgccagt ttgaagtggg cgttcgtaaa aactggggcg actttgttac gacgttgaac
     1501 gcgtttcaaa tcaaacgccc gggctactgg cgcggcaata ccaaaaaagg tactgatttt
     1561 gcagcatata aagcagcagg aggcgcagac ggagatgaac aaggcatgga acgcagccgc
     1621 ggtatcgaat tcaatgccta tgccaacctg ttaaacaaaa ccctgcgccc gactttcggc
     1681 ctgatgtacc tgcaatcgac cgtgaaagac tacccaaatt cacgcgatat gctggttaac
     1741 ggcgtacaag tcgccaatcc gcgcgtaatt gccaaggcag gtttggaatg ggatacaccg
     1801 tttgccaaag gcttgacttt aaacagcaat gtttcgtatt tcggcaagtc ttaccaagac
     1861 acgcaaaaac aatacgcctt cccatcctat accttggttg atgtaggcgc gcgctacaaa
     1921 accaagctcg gcaaaaatac gttgaccgtc agcagctcgg tggaaaatct gttcaacaaa
     1981 aactactggc aggtacagcg cggccaatac gaccgcagct tcgccgtcgt cggtctgccg
     2041 cgtacttact ggctgaaggc ggaattggat ttctgatttc tccgcatctg gaaaatgccg
     2101 tccgaacagg tttcagacgg catttctttt aaagagatat ggcgggatac gcttaaataa
     2161 tgctattcta gcgtctttga aacctgcttg tttgaagtga tgaaaaaacc tttgatttcg
     2221 gttgcggcag cattgctcgg cgttgctttg ggcacgcctt attatttggg tgtcaaagcc
     2281 gaagaaagct tgacgcagca gcaaaaaata ttgcaggaaa cgggcttctt gaccgtcgaa
     2341 tcgcaccaat atgagcgcgg ctggtttacc tctatggaaa cgacggtcat ccgtctgaaa
     2401 cccgagttgc tgaataatgc ccaaaaatac ctgccggata acctgaaaac agtgttggaa
     2461 cagccggtta cgctggttaa ccatatcacg cacggccctt ttgccggcgg atttggcacg
     2521 caggcgcaca ttgaaaccga gttcaaatac gcgcctgaaa cggaaaaagt tttggaacgc
     2581 ttttttggga aacaagctcc ggtttccctt gccaataccg tttattttaa cggcagcggt
     2641 aaaatggaag tcagtgttcc cgccttcgat tatgaagagc tgtcgggcat caggctgcat
     2701 tgggaaggat tgacgggaaa aacggtttat caaaaaggtt tcaaaagcta ccgcaacagc
     2761 tatgatgcgc ccttgttcaa aatcaagctg gcagacaaag gcgatgccgc gtttgaaaaa
     2821 gcgcatttcg attcggaaac ttcagacggc atcaatccgc ttgctttggg cagcagcaat
     2881 ctgaccttgg aaaaattctc cctagaatgg aaagagggtg tcgattacaa cgtcaagtta
     2941 aacgaactgg tcaatcttgt taccgatttg cagattggcg cgtttatcaa tcccaacggc
     3001 agcatcgcac cttccaaaat cgaagtcggc aaactggctt tttcaaccaa gaccggggaa
     3061 tcaggctcat ttatcaacag tgaagggcag ttccgttttg acacgctggt gtacggcaat
     3121 gaaaaatacg gcccgctgga catccatatc gccgccgaac atctcgatgc ttctgcctta
     3181 accgtattga aacgtaagtt tgcacaaatt tccgccaaaa aaatgaccga ggaacaaatc
     3241 cgcaatgatt tgattgccgc cgtcaaaggc gaggcttccg gactgttcac caacaatccc
     3301 gtattggaca ttaaaacttt tcgtttcaca cagccgtcgg gaaaaatcga tgtgggtgga
     3361 aaaatcatgt ttaaagacat gaagaaggaa gatttgaacc aattgggttt gatgctgaag
     3421 aaaaccgaag ccgacatcag aatgagtatt ccccaaaaaa tgctggaaga cttggcggtc
     3481 agtcaggcag gcaatatttt cagcgtcaat gccgaagatg aggcggaagg cagggcaagt
     3541 cttgacgaca tcaacgagac cttgcgcctg atggtggaca gtacggttca gagtatggca
     3601 agggaaaaat atctgacttt gaacggcgac cagattgata ctgccatttc tctgaaaaac
     3661 aatcagttga aattgaacgg taaaacgttg caaaacgaac cggagccgga ttttgatgaa
     3721 ggcggtatgg tttcagagcc gcagcagtaa tgggtcaaat gccgtctgaa atgttcaggc
     3781 ggcattttgt tgtattggaa actgccgttt tcaaccattc ctttagataa gccgtgtcgg
     3841 att
//
LOCUS       DBBZXW010000140         3752 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.140, whole genome shotgun sequence.
ACCESSION   DBBZXW010000140 DBBZXW010000000
VERSION     DBBZXW010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.140"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(53..820)
                     /locus_tag="ACJJD2_001975"
     CDS             complement(53..820)
                     /locus_tag="ACJJD2_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HGG7580442.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGALTALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVYETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(908..1735)
                     /gene="mutM"
                     /locus_tag="ACJJD2_001976"
     CDS             complement(908..1735)
                     /gene="mutM"
                     /locus_tag="ACJJD2_001976"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HGG7580443.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1787..2452)
                     /locus_tag="ACJJD2_001977"
     CDS             complement(1787..2452)
                     /locus_tag="ACJJD2_001977"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7580444.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRLLADAGFDIELGKFMVYLPPVS
                     SLGQIRFWQFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     IAD"
     gene            2630..>3752
                     /locus_tag="ACJJD2_001978"
     CDS             2630..>3752
                     /locus_tag="ACJJD2_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HGG7580445.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDIYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIVRLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKN"
BASE COUNT          929 a         1218 c          833 g          772 t
ORIGIN      
        1 ccactataca tccgcaaaag cgaatcatac tgccacattc cggcaaccgg tttcagacag
       61 cgatatccgc atcgtcggcg acaacggcac ggatgctttc ttcgatttta tcttttaaag
      121 cataacggtc ttcgctttcc gccgcatccg ccacgcaaac gaaatcgact tttatcgtta
      181 attttttcat agacacaatg cgccacaggc aggtcggcaa accgacatcg gcatatgagg
      241 gacgagccgt cctttttccc gtttcgtcat aataacgcag cgcgaccgcc aaaacctttg
      301 cccccgcatc aatggcggat tggaacagcg cggctttgaa cggcaggagc cccagtccgg
      361 aggaagtccg cgcttcgggg aaaaaactga cgttttgacc gcgttgcaag gtttcgtaga
      421 cggcgcggtt aatcggttcg atgtcgcgcc gcgaattgcg gttgatgaac accgttcccg
      481 cgttctgccc catcttgccc aataccggcc agcttttgat ttcctgcttg gcgataaagc
      541 tgctcggata aaccgcgctc atcgcgaaaa tatccagcca ggacacgtgg ttggcggcaa
      601 ccaagacacc gttcggatgt tcgggtgcgg gcctgcccac ctccaatccg atatccaaag
      661 ccgtcagagc ccccctgccc aactcgatta ccgcccgatt gcgcgactcg gggcagccgc
      721 cgtcaatacc gcgcaggttt ttgccggttt tgaatagcca gaccgtcaag cggcacaagc
      781 ggcgcagacg tgtaaaaaat gaagctttat ttgaagacat gaacaattct ttcccgataa
      841 tcggtgtttg ttgttgaaac gttcggacgg cataccgata aaatgccgtc tgaaaccgtt
      901 ttccgcccta tttctgacaa ttcgggcagt aaaacgtgcc gcgctgcccc aaagtttctt
      961 tcacaaccaa accgccgcac tgggggcacg gctgattgtg ccgcccgtac accgtatatt
     1021 cctgttggaa gtagccgctt ttgccgtcgc tgtccacaaa atccctcaag gtactgccgc
     1081 ccgtttcaat ggcgcgccgc aacaccgctt tgacggtttc aaccaaaagc gcacactctt
     1141 tctttttcag acggttggca ggacggtggg gcgaaatgcc cgctctgaac aggctctcat
     1201 tggcataaat attgcccaca ccgaccacga ccgcattgtc catcagggca agtttgaccg
     1261 cgcgcttctg cgccttcagc ctcacataca gataatccgt gcaaaatgcc tccgacaaag
     1321 gctccggccc cagtttttcc aacagcggat gatgttcttc gattccctca taccaaagta
     1381 tcgcgccgaa ctttctcgga tcgcggtaac gcatgaccgt gccgtctgaa aacacaatat
     1441 cgacgtgatc gtgtctgtcc ggcctgccga tacgtccgtc cgacggcgta aaaatccgca
     1501 agctgcccga catccccaag tgaatcagca gcacgcccgt ttgaaagcgg ataagcaggt
     1561 atttcgccct cctgccgcag gacaacacct gccggccgga caaaatctcc cccaaatcgg
     1621 gattaatctg ccagcgcagc ttcaattggc gcaataccac ggcttccacc gttttccctt
     1681 caatatgcgg cgcgatgccg cgcaacgtcg tttccacttc cggcaattca ggcataaccc
     1741 ctcccgacat ttcttctgac agatgccgtc tgaaagacgg ctgtccctaa tccgcaatcc
     1801 ttgccgcacc cgccgcaagg gctttgccgc ccaaataccc gtcccacgcg ggcaggggcg
     1861 ttacgcccgc cgcccttttg accaaaacca gaccgtacac tgcggcacat tgcggccacc
     1921 aacggtcgcc cgccttttcc ataaactgcc aaaagcgtat ttgcccgagc gacgaaacgg
     1981 gcggcagata caccataaat ttcccaagtt caatatcgaa gccggcatcg gcaagcagcc
     2041 ttttcaactc gggcagcggc agacaaaacc gtttttccgg caggcgttcg ccgtcaaacc
     2101 aacggctgaa tccccagagc gaatacggat tgaaacccgt cagcatcaaa cgtccgcacg
     2161 gtttcaatat ccggtgcgct tccgacagga tttgcgaagg aacaccgcct tcaagcgtat
     2221 gcggaaaaag cagcatatcc gcagaaacat ccgccaaagc catattctcc gccgacatcg
     2281 acatatctcg cggcacacag acaacatctt cagacaggct cagccacgga ccgcccacct
     2341 gaaccgcaca cattcccgaa aaacggtatg aatctagata ccgcccgaag aagtcctgtt
     2401 ccaattttgc aacataccgc cccatcgccg tatcttcaaa ccatgcatcc atattgcgtc
     2461 cgtttcaaac agattgcctg ccgatattct attccaaaca gaatttctgt caaaaaacac
     2521 atcggccgcc cacttccgaa tccgcataaa gttcctgtaa aacttgacgc tttttcagtc
     2581 aaacagtacc atcggacgat aaaatatgtt tattccgccg atataaatca tgtccaaact
     2641 caaaaccatc gccctgaccg cgtcaggtct gtccgtttgt ccgggtttcc tatacgccca
     2701 aaacacctca tcacaccaaa tcggtttggc gattatgcgc ttaaactctt caatactcga
     2761 cctgcccccg acaaaacaat atttccaatc cggcagcctg tggagcgagc tgcgccaagg
     2821 cttccggatg ggcgaagtca atcccgaact ggtacgccgc cacgaaagca aattcatcgc
     2881 aagccacagc tatttcaaca gggtcatcaa ccggagtaga ccctatatgt accatatcgc
     2941 caacgaagtc aaaaaacgca atatgcccgc cgaagccgcc ctgcttccct tcatcgaaag
     3001 cgcgttcgtc accaaagcca aatcacacgt cggcgcatcg ggcctgtggc agttcatgcc
     3061 cgctaccggc aggcattacg gcctggaaaa aacaccggtt tacgacggca ggcacgacat
     3121 ttacgccgcc accgatgccg cactcaacta tctgcaatac ctctatggac tgttcggcga
     3181 ctggccgctc gcctttgccg cctacaactg gggtgaaggc aacgtcggac gcgccatcaa
     3241 ccgcgcccgc gcccaagggc tcgaaccgac ctacgaaaac ctgcgtatgc ccaacgaaac
     3301 gcgcaactat gtccccaagc tgctcgccgt gcgcaacatt attgccactc cccaatcttt
     3361 cggtatgaat atcagcgaca tagacaacaa accctatttt caggcagtcg aaccggatcg
     3421 tccgctcgac aacgaagcca tcgtccggct tgccggcatc acgcaaagcg agctgctcgc
     3481 cctaaacccc gcattcaacg tccccgcgtt tatccccaaa agcaaacgca aactgctgct
     3541 tcctgtcgca tccgtccaaa ccttccaaag caactacctc aacgccgcac ccgacagcct
     3601 gttttcatgg gaagtctata cgcctgccgc caaaaccagc ctgtccgaca tctcgacggc
     3661 aaccggcatg agcattgccg acatcaaacg cctcaacaac ctgaacggca accttgtcaa
     3721 cgcaggacgc agcatccttg tcgccaagaa cg
//
LOCUS       DBBZXW010000141         3621 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.141, whole genome shotgun sequence.
ACCESSION   DBBZXW010000141 DBBZXW010000000
VERSION     DBBZXW010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.141"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..294)
                     /locus_tag="ACJJD2_001979"
     CDS             complement(<1..294)
                     /locus_tag="ACJJD2_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HGG7580446.1"
                     /translation="MFLILGRNFLKIILCFSFFVPKFALASVNVPGKFDRVEVYDDGR
                     YLGIRGSDDKRRRIWKGVFDRESGRYLTSEAQDLKVRHVSTGASSTGKVSSVVS"
     gene            complement(641..943)
                     /locus_tag="ACJJD2_001980"
     CDS             complement(641..943)
                     /locus_tag="ACJJD2_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580447.1"
                     /translation="MGYRVGMNCFDTRLQADDYLLSSLPPTVTEEGKIIRPERVGDKW
                     ILNGKPVTLSYPECSNFEQIKQGSYVGSTVLILFVVIFGFRLLINFLKDMGKVGTD"
     gene            complement(971..1201)
                     /locus_tag="ACJJD2_001981"
     CDS             complement(971..1201)
                     /locus_tag="ACJJD2_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580448.1"
                     /translation="MNIVKKYAVKALLAAGIFTPAIVMADGFDAAAIGTQVANVIMGF
                     VAMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            complement(1439..1639)
                     /locus_tag="ACJJD2_001982"
     CDS             complement(1439..1639)
                     /locus_tag="ACJJD2_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580449.1"
                     /translation="MKFEERFIVQDLETHDFIYPDPFGDVGFTQNIKSAGQFESYEDA
                     LNSGINEMGGGFQIFQFFVKSE"
     gene            complement(1643..1954)
                     /locus_tag="ACJJD2_001983"
     CDS             complement(1643..1954)
                     /locus_tag="ACJJD2_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580450.1"
                     /translation="MFNQTQTVTYPATFLGAKKFKGEIDGSNIDTCSVLVATPLPAQS
                     GNAVGFTAAQMKFGDSKNFSRLENLKYPCEVMVMVEMTSTGKGMVPSLIDFQVAEKPK
                     G"
     gene            complement(1966..3180)
                     /locus_tag="ACJJD2_001984"
     CDS             complement(1966..3180)
                     /locus_tag="ACJJD2_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HGG7580451.1"
                     /translation="MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHEDT
                     LLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
                     VHFGGQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTP
                     DQALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKT
                     LNLTFEHKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLR
                     DGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLS
                     KVYHQNVDYDYF"
BASE COUNT         1157 a          847 c          529 g         1088 t
ORIGIN      
        1 agatacaacc gaactaactt tacccgtact tgatgctcca gtagatacat gcctaacttt
       61 taaatcttga gcttctgaag ttaaatatct tcccgattct ctatcaaata cacctttcca
      121 aattcttctt cttttgtcat ctgaacctcg aatacctaaa tatctgccat catcataaac
      181 ttcaacccta tcaaatttac ccggaacatt tactgatgcc aatgcaaatt taggtacaaa
      241 aaaactaaag cataggataa tctttaaaaa atttcgccct aggataagaa acataacatt
      301 ttgcttcatc taatttaatt aataatgtag aagaatcagg gaattgaatt tctataaaat
      361 ctctatcata acgatgaaag aaattcctaa aaatatcaaa tgaaaacgaa gttttaaaaa
      421 ccccttttct aatcaattcc ctataataaa ttaacgcttg tggtaaatct ctataaatat
      481 gtgaatcagt ttgaaattta actaaatgat attcagaaat aaacataatt cggacctttt
      541 aaaacactct aaaaagccga ttctaccaac cgttaccaaa acagccaagc aacagacaaa
      601 gccaagaaga aaccgagaag aaaccaaaaa tcaataatca tcaatcagta ccaaccttgc
      661 ccatgtcttt taagaaatta atcagaagcc tgaaaccgaa aatgactacg aacagaatta
      721 gaaccgtcga accgacataa gaaccttgct ttatctgctc aaaattggaa cattccggat
      781 aagacaacgt aaccggcttt ccgttcaaaa tccatttatc gcccaccctt tccggcctga
      841 tgatttttcc ttcttctgta acagtaggag gaagagacga caataaatag tcgtctgcct
      901 gcaatcttgt atcaaaacag ttcatgccga cacgataacc cattcacgcg cccctctttc
      961 ttcactgccg ttatttgaca gatttaatca tgctccaagc cattttgaag ccttggattg
     1021 ccaaaatgac ggtaatggcc gccataccca cggcggaaac catcgcaacg aaacccatga
     1081 ttacattcgc cacttgcgta ccaatcgcgg ctgcatcaaa gccatctgcc ataacaatag
     1141 ccggtgtgaa gataccagct gccaacaatg cttttacagc atatttttta acgatgttca
     1201 tcgttttttt cctttttttg atatttaaaa taagacgact tcttgacttg cttcatccgg
     1261 acgaagtctt ttccgaatct cgtttttagc cgataaaata gaggattgcg aaaagaaaaa
     1321 gaaacataca gaccacccag ccgataatta gtgttgcaag gttcattttc atgatatttt
     1381 tcctttgttg cgggctttgt gaaaggttaa cagaccgccc gccgagcctg tttttctttt
     1441 attccgattt tacgaagaac tgaaatatct ggaatcctcc gcccatttca tttatgcctg
     1501 aattcaacgc atcttcgtaa ctttcaaatt gacctgctga tttaatattt tgagtaaacc
     1561 ccacatcacc gaacggatcg ggataaataa agtcatgcgt ttctaaatct tgaactatga
     1621 aacgttcttc aaatttcata aatcaacctt tcggcttttc cgccacctga aaatcaatta
     1681 atgacggaac catgccttta cctgtcgaag tcatttcaac cattaccata acttcgcacg
     1741 gatatttgag attctctaac cttgagaaat tcttactatc cccgaacttc atttgtgctg
     1801 ccgtaaatcc aacagcatta cccgactgtg ccggtaaagg tgttgcaacc aatacggaac
     1861 aagtgtcaat gttagagcca tcaatttcac ctttgaattt tttggctccc aaaaaagttg
     1921 caggataagt tacagtttga gtttgattaa acattttgat ttcctttaaa aataatcata
     1981 atctacattt tgatgataaa ctttacttaa atattcctga tatttccttt ctttctcgac
     2041 atcataatca ggactaaaaa gccttttttc cctatcgaat ttgtcagaat ttttaaaagc
     2101 aataaccccc aattcatcaa gttcaatttc caaatcaata tccggctgtt catgaataaa
     2161 accgtgtttc aaaccgtccc ttaacatttc cagagcatat ttttcaggtt ctaatccttt
     2221 gggaaatccc gaatctgcct ttaaagattc cacaatttcg ctattatcaa aacccatttc
     2281 aatcatgaaa ttgaccagtt ttccaaccgc gtttttcgcg taatgcaatt tatgctcgaa
     2341 agttaaatta agcgttttct ttctctgatc aaacctttcg ggaaccggca tatttttaaa
     2401 ttttctacaa attggaaaag ctccacagaa atacgaaccc tgatttatta aaatatccaa
     2461 gggtatttct atatctccat aattaaactg gatctcgaac cttacccatt tgctttcttt
     2521 atctccaagc tgcctgcctt tctcataaac acgaacaaaa cgagaatttt tcttgcgacc
     2581 tacataaaat gtcttgccgc tcccgtcctc attccgccaa gccgtaccga tcgtttcaga
     2641 tttcggcctt tgattgctgt tatcaaaaaa accattatcg tgatctaaca acgcctgatc
     2701 cggcgtgtac tctccatcaa aaaaatcaag tgctaggtca attcgcgtta ttcttgtcct
     2761 tatcgaatca tcgagaaact gctttagcct caactcccaa cccggacttg caacgctgca
     2821 accagtacct ttcaactcaa ctaaaacagt attgcgctga cctccgaaat gcacctctcc
     2881 ataatcaaca tcatccgaac ctaacctata catggattca tagaatttgt tgccccttga
     2941 tttgcatttg cgcgttatgc caaaacctag aatttcttcc agctttctgc ttaatacata
     3001 catgtattca gcatcagaaa ataaagggca accggaaact ttcagtaaag tatcttcatg
     3061 gaatgtgaat gaaatccaat caacaaaaac cccgtcttgc ttacctcttc gctgcggaat
     3121 ttctaaaagc ttcccttttc cgtccgatat aaagtgtgag aaatattcaa cttcactcat
     3181 tcgttcacta ctcttggaat tggtttttaa tttcgctccc cccctgttag tcaagggggg
     3241 gctttcagcc gtttcccgtc ttccgcgcta aagcgcgtac gacggtcaac gaccgaaagc
     3301 caaatcctga caaactttta aagatcaaca aaaaagacca caaccatccg ttgtgataat
     3361 cactggaaaa ttcgaaccaa ccgaatctat ataatcgaac gcctgataaa gctttgaaaa
     3421 attctcttga ttaatgagtt tatgcggttc gccatgtctg aactgataaa aacacaaaac
     3481 acaagaatct gattttttaa atattctcca ataagaacag gaaaatatta catttactgc
     3541 tgacataaaa aagccccttt cacttggctg tcaaagggga atgttaagaa aattaatgcg
     3601 cccctttgat agagcgcatc a
//
LOCUS       DBBZXW010000142         3601 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.142, whole genome shotgun sequence.
ACCESSION   DBBZXW010000142 DBBZXW010000000
VERSION     DBBZXW010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3601
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.142"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..857)
                     /locus_tag="ACJJD2_001985"
     CDS             complement(<1..857)
                     /locus_tag="ACJJD2_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7580452.1"
                     /translation="MYSNNAITNNRNNITLGAYRDAIISIFSDENVVRAIGTINSMYE
                     EYLTLSHKIDQRAFLREGERLSAKAREFQRTAEEAQKSLKEGIGRAASKFRGNSKEAF
                     VARKVQSDLQKALNASNYNKQQYARRAATALENASKSKVMAANLGKFTYGATVAMGTL
                     SMGSAWWKALDEEGNWSDVGLSSASFLGGLMGFQWGAALGVGAFGLLTGGAGWLVVGT
                     IIGGGSGAWWGSLGAEKAWRWFEDFLNLNRSDKFHVTDPLALDLDGDSIETVATKGLA
                     GALFDHRSQG"
     gene            2035..>3601
                     /locus_tag="ACJJD2_001986"
     CDS             2035..>3601
                     /locus_tag="ACJJD2_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HGG7580453.1"
                     /translation="MCSAVLFIYFFLLNIFLFQPAVIHIQSNYILFMSIVSAPLPALS
                     ALIILAHYHGIAANPADIQHEFCTSAQSDLNETQWLLAAKSLGLKAKVVRQPVKRLAM
                     ATLPALVWCDDGNHFILAKTDGGGEHAQYLIQDLTTNKSAVLSFAEFSNRYSGKLILV
                     ASRASVLGSLAKFDFTWFIPAVIKYRRLFFEVLVVSVVLQLFALITPLFFQVVMDKVL
                     VHRGFSTLDVVSVALLVVSLFEIVLGGLRTYLFAHTTSRIDVELGARLFRHLLSLPLS
                     YFEHRRVGDTVARVRELEQIRNFLTGQALTSVLDLAFSFIFLAVMWYYSSTLTWVVLA
                     SLPAYAFWSAFISPILRTRLNDKFARNADNQSFLVESITAVGTVKAMAVEPQMTQRWD
                     NQLAAYVASGFRVTKLAVVGQQGVQLIQKLVTVATLWIGARLVIEGKLTVGQLIAFNM
                     LSGQVAAPVIRLAQLWQDFQQVGISVARLGDILNAPTENASSHLALPDIRGEITFEHV
                     DFRYKADGRLILQD"
BASE COUNT          960 a          774 c          745 g         1122 t
ORIGIN      
        1 ccttggctgc ggtggtcgaa caatgcacct gcaaggcctt tggtggcaac ggtttctata
       61 ctgtcgccat ctagatctag ggcaaggggg tcggttacgt ggaatttgtc gctgcggtta
      121 agatttaaga aatcttcaaa ccatctccaa gctttttcag ctcctaatga tccccaccaa
      181 gctcctgagc cacctccaat tatagttcca actactagcc aacctgcgcc accagtaagt
      241 aaaccaaaag ccccaacacc caaagccgca ccccattgga agcccattag cccacccaaa
      301 aaagaagctg atgagagacc aacatcactc caatttcctt cttcatccaa ggctttccac
      361 caagcacttc ccatactcaa agttcccatg gcaacagttg ccccataagt aaacttaccc
      421 aaattcgctg ccataacttt tgattttgaa gcattctcta acgctgttgc cgcacgtctt
      481 gcatattgct gcttgttata gttgctagca ttcaatgctt tttgcaaatc actttgtact
      541 tttcttgcaa caaatgcctc ctttgaatta ccacgaaatt tactagcagc tcttccaatt
      601 ccttctttta agcttttttg tgcctcttct gctgtgcgtt ggaattctct tgccttagca
      661 gacagacgct caccctccct taaaaatgct cgttgatcta tcttgtgcga aagggtcaaa
      721 tattcttcgt acattgagtt aatcgtacca atcgccctaa ccacattttc atcagaaaat
      781 atggaaataa tagcatccct atacgcacct agagtaatat tgtttctatt attagttata
      841 gcattattcg aatacataat agcacctcca aacttagaac tgaatacgtt tatattctct
      901 gtgtaataat atcaaataat taattaatgg ataagtaagt ccgaaaaaat aacaactaaa
      961 ataagcaata tactgattct ctcctttatt aattagatat attgaaaaac aaataaaaaa
     1021 taaacagaaa acattcatgt gaaaaagcca cctcatattc ttatttataa gtttaaaata
     1081 actaggcatt gtatatttaa aaatcggtac atccaacgga aacaaaccac ataaaaattt
     1141 ttctttattc tttattaaag acatagtttt atttttcaaa attagtccag ataatatact
     1201 aacaattact attaaaacaa taagcacagc gtaatttttt ataaaattca ttaaaataat
     1261 aacgaaaata ctaaatagat tacatactgt aaattgaaat ataaaatatt cagtatttaa
     1321 tccattttca accgcgagtt ttttaaaata tccttgctcg aaaaaattaa aaaaatccat
     1381 taatactttc ctctcaagaa aactaatttt agtttagtta agataaaatg caatattacc
     1441 ttttctccat aaaagtatgg agcttatata cataaattat gtgcgaggta gcctgaaaaa
     1501 tatccaatac aagatagtag gagatgtttc ccttatcact attggccaat acccaattgg
     1561 caggcactct atttccaaaa ttttctcaag aatagttaaa tattattaat tagtttaaaa
     1621 acaataacat acgtttgtat ttatccgttt tggtctgcct gaaacagact ctatgtccat
     1681 acacggacat gtagacagtt tccttgttat tttggttgct cgtcattagt gatgatactt
     1741 tactcctctc ttaaaaaatc gtcaagaact gttatcaatc tttaaagtct tttttaaaca
     1801 aatatatata cgttcaggct gtctgaaaca caaaaaaatg atgttacccg accgtgacag
     1861 agtcggggca gccggtacct taaccctgca ccttaaccct gtgccttaac ggtatgcagg
     1921 aggcacgaga ggtgcgaggc atcctcatct aactcgattc ctaagccgtt ttaccttcct
     1981 gaaacgagaa cttttccata ctttctcttt acaattccca tatacatcct tacaatgtgt
     2041 tctgctgttt tatttatata tttctttcta ctgaatatat tccttttcca gccagccgtt
     2101 atccacatcc aatctaacta tattttattt atgtctatcg tatccgcacc gctccccgcc
     2161 ctttccgccc tcatcatcct cgcccattac cacggcattg ccgccaatcc tgccgatata
     2221 cagcatgaat tttgtacttc cgcacagagc gatttaaatg aaacgcaatg gcttttagct
     2281 gccaaatctt tgggattgaa ggcaaaggta gtccgccagc ctgtcaaacg tttggctatg
     2341 gcgactttac ccgcattggt atggtgtgat gacggcaacc attttatttt ggctaaaaca
     2401 gacggtgggg gtgagcatgc ccaatatcta atacaggatt taactacgaa taagtctgcg
     2461 gtattgtctt ttgccgaatt ttctaacaga tattcgggca aactgatatt ggttgcttcc
     2521 cgcgcttcgg tattgggcag tttggcaaag tttgacttta cctggtttat tccggcggta
     2581 atcaaatacc gccggttgtt ttttgaagta ttggtggtgt cggtggtgtt gcagctgttt
     2641 gcgctgatta cgcctctgtt tttccaagtg gtgatggaca aggtgctggt acatcgggga
     2701 ttctctactt tggatgtggt gtcggtggct ttgttggtgg tgtcgctgtt tgagattgtg
     2761 ttgggcggtt tgcggacgta tctgtttgca catacgactt cacgtattga tgtggaattg
     2821 ggcgcgcgtt tgttccggca tctgctttcc ctgcctttat cctatttcga gcacagacga
     2881 gtgggtgata cggtggctcg ggtgcgggaa ttggagcaga ttcgcaattt cctgaccggt
     2941 caggcgctga cttcggtgtt ggatttggcg ttttcgttta tctttctggc ggtgatgtgg
     3001 tattacagct ccactctgac ttgggtggta ttggcttcgt tgcctgccta tgcgttttgg
     3061 tcggcattta tcagtccgat actgcggacg cgtctgaacg ataagttcgc gcgcaatgca
     3121 gacaaccagt cgtttttagt agaaagcatc actgcggtgg gtacggtaaa ggcgatggcg
     3181 gtggagccgc agatgacgca gcgttgggac aatcagttgg cggcttatgt ggcttcggga
     3241 tttcgggtaa cgaagttggc ggtggtcggc cagcaggggg tgcagctgat tcagaagctg
     3301 gtgacggtgg cgacgttgtg gattggcgca cggctggtaa ttgagggcaa gctgacggtg
     3361 gggcagctga ttgcgtttaa tatgctctcg ggacaggtgg cggcgcctgt tatccgtttg
     3421 gcgcagttgt ggcaggattt ccagcaggtg gggatttcgg tggcgcgttt gggggatatt
     3481 ctgaatgcgc cgaccgagaa tgcgtcttcg catttggctt tgcccgatat ccggggggag
     3541 attacgttcg aacatgtcga tttccgctat aaggcggacg gcaggctgat tttgcaggat
     3601 t
//
LOCUS       DBBZXW010000143         3420 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.143, whole genome shotgun sequence.
ACCESSION   DBBZXW010000143 DBBZXW010000000
VERSION     DBBZXW010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.143"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..330
                     /locus_tag="ACJJD2_001987"
     CDS             <1..330
                     /locus_tag="ACJJD2_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7580454.1"
                     /translation="RDGEDGGLLCKFFPDILACDRLPEPNPAEDLNLPSETVNVEFQK
                     SGIFQNSAQCPAPVTFTVTVLDSSRQFAFSFENACTIAERLRYMLLALAWAVAAFFCI
                     RTVSREV"
     gene            634..918
                     /locus_tag="ACJJD2_001988"
     CDS             634..918
                     /locus_tag="ACJJD2_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HGG7580455.1"
                     /translation="MKLLAALIPLLMSVAGRILTALGLMAVTYSGVDRLVAHFQQAIT
                     SSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK"
     gene            919..2106
                     /locus_tag="ACJJD2_001989"
                     /pseudo
     CDS             919..2106
                     /locus_tag="ACJJD2_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin family protein"
     gene            2321..3277
                     /locus_tag="ACJJD2_001990"
     CDS             2321..3277
                     /locus_tag="ACJJD2_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISNgo3 family transposase"
                     /protein_id="HGG7580456.1"
                     /translation="MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKAYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQHQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDYNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKAGKPKMVIIVAIMRKLAKLAYYIVKTGQPYDAERHRLNQ"
BASE COUNT         1123 a          736 c          774 g          787 t
ORIGIN      
        1 agggacggcg aagacggcgg ccttttgtgc aaattcttcc ccgacattct cgcttgcgac
       61 aggctgcccg agcccaatcc ggcagaagat ttaaatctgc cgtctgaaac cgtcaatgta
      121 gagtttcaga aatcaggaat ctttcaaaat tccgcacagt gtcccgcacc tgtcactttc
      181 acagtgactg tgcttgattc cagcaggcag ttcgcgttca gctttgagaa cgcatgtacc
      241 atagccgaac ggctaaggta catgcttctc gcccttgctt gggcggttgc cgcatttttc
      301 tgtatccgca cagtatcccg tgaagtctag caggcgcagc accgccgggc ttcagtaact
      361 tgtaccaagg caggaggagg acgtccagaa agatttgtaa agacggcttt atcgtcttta
      421 taaatctttt tggatacccc ttgccgcccc gccaaaagaa tacactctgc cgcaagggca
      481 ggtggtaagg cgcgcgcttt ttgcgccgtt ccccctgccc ccgcggcgtc gcaagtgaga
      541 ctgggggtgt gggggctagt ccccgcaaaa tctttcagat taagaaacat ttttttaatg
      601 aggcaaccgt gccttttaag aaagggatag caaatgaaat tgttggccgc attgattccg
      661 ctgttgatga gcgtcgcagg ccgtatattg actgcattag gcttgatggc tgttacttat
      721 tcgggtgtag atagattggt agcccatttt cagcaggcga taaccagtag cataacgggc
      781 gcgcctcaag cgatgttgca gctcttttat ataagcggtg gcggcaccgt tcttaatatc
      841 ctgtttggcg cgatcgcctt tattctgtca ttcaaacaaa tgacaaaact agcaacctca
      901 atcgggaaga aaaaataaat ggcagagatc tgtttgataa ccggcacgcc cggttcaggg
      961 aaaacattaa aaatggtttc catgatggcg aatgatgaaa tgtttaagcc tgatgaaaac
     1021 ggcatacgcc gtaaagtatt tacgaacata aaaggcttga aaataccgca cacctacata
     1081 gaaacggacg caaaaaagct gccgaaatcg acagatgagc agctatcggc gcatgatatg
     1141 tacgaatgga taaagaagcc cgaaaatatc gggtctattg tcattgtaga tgaagctcaa
     1201 gacgtatggc cggcacgctc ggcaggttca aaaatccctg aaaatgtcca atggctgaat
     1261 acgcacagac atcagggcat tgatatattt gttttgactc aaggtcctaa gcttctagat
     1321 caaaatctta gaacgcttgt acggaaacat taccacatcg cttcaaacaa gatgggtatg
     1381 cgtacgcttt tagaatggaa aatatgcgcg gacgatcccg taaaaatggc atcaagcgca
     1441 ttctccagta tctatacact ggataaaaaa gtttatgact tgtacgaatc agcggaagtt
     1501 cataccgtaa ataaggtcaa gcggtcaaag tggttttaca ctctgccagt aatagtattg
     1561 ctgattcccg tgtttgtcgg cctgtcctat aaaatgttga gcagttacgg aaaaaaacag
     1621 gaagaacccg cagcacaaga atcggcggca acagaacagc aggcagtact tccggataaa
     1681 acagaaggcg agccggtaaa taacggcaac cttaccgcag atatgtttgt tccgacattg
     1741 tccgaaaaac ccgaaagcaa gccgatttat aacggtgtaa ggcaggtaag aacctttgaa
     1801 tatatagcag gctgtataga aggcggaaga accggatgcg cctgctattc gcatcaaggg
     1861 acggcattga aagaagtgac ggagttgatg tgcaaggact atgtaaaaaa cggcttgccg
     1921 tttaacccat acaaagaaga aagccaaggg caggaagttc agcaaagcgc gcagcaacat
     1981 tcggacaggg cgcaagttgc cacattgggc ggaaaaccgt agcagaacct aatgtacgat
     2041 aattgggaag aacgcgggaa accgtttgaa ggaatcggcg ggggcgtggt cggatcggca
     2101 aactgaagaa aacggcaaga gagaaaaaag acccgtaaac cgtttgaata tagacggttt
     2161 acgggtcttt gtttcgcgca aagcaagggc taaggcagtc aggcagcaaa tcccgcaatg
     2221 tattaaaaca gacgcgtaga aatgccggct gcctttatcc atcctcaaaa ttgaatatca
     2281 tcctagccgt atcaaggctg tataaataag gaaaatacca atgaatataa tcgggctgga
     2341 catctcaaag gataccatag acgcaacatt gcataaaaca aacggaagta tccattacat
     2401 taaatttaag aataatgatg atggattaaa acagtttaga ttgtggataa agggaaacag
     2461 aatcagaaaa gcctatatcg gcatggaggc aacaggcatc tattacgaaa aggcagcaga
     2521 tatgctttct tcctactata ccgtttacgt tatcaatccc ttaaaaatca aggactacgg
     2581 gaaaagcagg tttaaccgta ccaaaaccga caaagcagat tcaaacctga tagcagatta
     2641 cataaaaagg catcaagata cattgatacc gtatcagata cccaaaaaca aagcactgca
     2701 aaaactgatt aaccttaaaa atcaattaca gcaacatcag aagcaaatta aaaaccgtct
     2761 tcatagcact gaagaagact tcataaggaa catacatcaa gacttgatag ataccataca
     2821 ggacaagatg gaacaggtaa aaatagccat atccgaacaa atcaaaaaac aaacggacta
     2881 taaccattac cgcaatcttc aaaccatccc gagcataggc aaagacaccg catcagttct
     2941 ttatgcgcaa ctgacagaaa aacattttaa aaccgcaaac cagtttgtat cctatgccgg
     3001 attaagtccc gccatcatac aatcagggac aagcgtaaga ggtcggggca gattgagccg
     3061 atacggaaac agacgattaa aaagtacgct gtatatgccc gccctttgtg cttaccgttt
     3121 taacgcattt ccgaaattaa taaataatct gaaaaaagcg ggtaagccaa agatggtaat
     3181 tatcgttgcc atcatgcgca aactggcgaa gctcgcctat tatattgtta aaaccggcca
     3241 gccttacgat gcggaaagac accgattgaa tcaataaaat tcaacaaaat taaacggtta
     3301 cgcgaatata tttgtgtaac cgtgcatttg catatcgtaa ataaacgtaa ataaaaataa
     3361 caatataaat cagtatattg caactttgtt ttttattttg tgttgacggg caacatatca
//
LOCUS       DBBZXW010000144         3347 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.144, whole genome shotgun sequence.
ACCESSION   DBBZXW010000144 DBBZXW010000000
VERSION     DBBZXW010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3347
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.144"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..101
                     /locus_tag="ACJJD2_001991"
     CDS             <1..101
                     /locus_tag="ACJJD2_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7580457.1"
                     /translation="VGFVGSTGGRLHLQWLPQTVLSYFDSFRTNSR"
     gene            151..933
                     /gene="trpC"
                     /locus_tag="ACJJD2_001992"
     CDS             151..933
                     /gene="trpC"
                     /locus_tag="ACJJD2_001992"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HGG7580458.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDETELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRAGDIEAEVGKLF"
     gene            998..3298
                     /gene="recQ"
                     /locus_tag="ACJJD2_001993"
     CDS             998..3298
                     /gene="recQ"
                     /locus_tag="ACJJD2_001993"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HGG7580459.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSSTSADGAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     TREDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLCY
                     GLNDWVLLHERIAEGNSDEVQKQIEMQKLDAMLAVCETAACRRVLLLKHFGEASEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSNKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNAADFSHDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKHKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
BASE COUNT          809 a         1010 c          900 g          628 t
ORIGIN      
        1 atgtcggctt tgtcggcagc accggcggca ggctgcacct gcaatggttg ccgcagaccg
       61 tcctgtccta tttcgacagc ttccgcacaa acagtcgtta acggtttgat gctaatattc
      121 cccctttccc agacgaatac ggaacccgac atgaccgaca tcctcaataa aatccttgcc
      181 accaaagcac aggaagttgc cgctcaaaaa gccgccgtca acgccgaaca catccgcgca
      241 cttgccgcag aagccgcgcc cgtccgcagc ttcatcgatt cgatacgcgg caaacaccgc
      301 ctaaacctgc ccgccgtcat agccgaaatc aaaaaggcaa gcccgagcaa agggttaatc
      361 cgtccggact tccgccctgc cgagattgca cgcgcctatg aaaacgccgg agcggcgtgt
      421 ttgtccgtac tgaccgacga accctatttc caaggttcgc ccgaatacct caaacaggcg
      481 cgcgaagccg tatcgctgcc cgtgctgcgc aaagacttca tcatcgacga ataccaggtt
      541 tatcaggcgc gcgcatgggg ggcggatgcc gtcctgctga ttgccgcagc actggaacag
      601 gaacaattgg aacgctttga agcggtggcg cacgaattgg gcatgaccgt cctgctcgag
      661 ctgcacgatg aaaccgaatt ggaaaaatgc cgcaacctga ccacgccgtt gtggggcgta
      721 aacaaccgca acctgaggac ttttgaagtc tccctcgacc aaaccctgtc gctgctgccc
      781 gcgctggaag gcaaaaccgt cgtaaccgaa agcggcatta caggcaaggc ggatgtggaa
      841 tttatgcaat cgcgcggtgt gcacaccttc ctgatcggcg aaacgttcat gcgtgccggc
      901 gatattgagg cggaagtggg caaactcttc taaatcccga tttcagacgg catattgccg
      961 ccaaccgacc aacaccctta ccgagcacgg aaccatcatg caccgaccga ccgccaaaca
     1021 gattctgcac gaagtatttg gttatcccga atttcgcggc aggcaggagg ctgtcatcaa
     1081 tactttggca ggcggcggga gtttgacggt gctgatgccg acgggcggcg gcaagtcttt
     1141 gtgttaccag attcccgcgc tgatgcgcga aggcgtggcg gttgtcgtat cgccgctgat
     1201 tgcgttgatg aacgaccaag tggcaaacct gcacgccgcc ggcatcgaag cggcggcagt
     1261 caacagcagc acatcggcag atggggcgcg cgagattgcc gacaagcttg cccaaggccg
     1321 tctgaaactg ctttatgtcg cgccggaacg cttggttacc gaccgctttt tgcgttttct
     1381 cgaccaacaa accgtcagcc tgttcgccat tgatgaggcg cattgcgtca gccaatgggg
     1441 acacgatttc cgccccgagt accaacagct cggcatgctt gccgaacgct atccgaacgt
     1501 cccgcgcatc gccctgaccg ccaccgccga tgccgccacg cgcgccgaca tcaagcatta
     1561 tctgcacttg gacgatgcgc ccgaatttat ctccagcttt gaccgcccga atatttatta
     1621 tcaggttatc gaaaaaaata atggcaaaaa acaactgctt gaattcatcc gcaaagaaat
     1681 gacggggcaa agcggcattg tgtattgcct aagccgcaaa aaagtcgaag atgtggcgca
     1741 gtttttgcgt gaaaacggat taaacgcgat tccgtatcat gccggtttga gcatggacgt
     1801 gcgcgaggaa aaccaacgcc gctttacgcg tgaagacaat attatcgtgg tggcgaccgt
     1861 ggcgttcggt atgggcatag acaaacccga cgtgcgcttt gtcgcccatc tcgatatgcc
     1921 ccagagtgtc gaacatttct atcaggaatc ggggcgcgcc ggacgggacg ggctgcctgc
     1981 cgtgagttgg ctgtgttacg gtttgaacga ttgggtgttg ctgcacgaac ggattgccga
     2041 aggcaacagc gacgaggtgc aaaagcaaat cgaaatgcaa aaactcgatg ccatgcttgc
     2101 cgtctgcgaa accgccgcct gccgccgcgt actgctgctc aaacatttcg gcgaagcatc
     2161 cgaaccctgc ggccattgcg acaactgcct gcatccgccc gtacggtttg acggcacggt
     2221 gttggtgcaa aaattactca gctgcgtgta ccgcgccgga caacgttttg ccgccggtta
     2281 catcaccaac cttttgcgag gtaaaagcga cgattggata cgcggcaacc ggcacgaaca
     2341 actgtccaca ttcggcatcg gtacggagtt gtccaacaaa gaatggcgca gcgtcatccg
     2401 ccagtgtatc agcctcggct acctcaccgt caacattacc cgatatcagg cattgcaact
     2461 gaccgaagcc gccaaaaaag tcctcaaagg cgaaaccgaa gtgatgctgc gtccgctcaa
     2521 gcgcgacaag cccgccgccc gcaccctcaa agacaactgg ctgcgtaccg aacgcgaaga
     2581 acgcctgtgg caggcattgc gcgtttggcg tatgaaacag gcagaagccg aaggcatccc
     2641 cgcctatatg attttcggcg acaaaaccct gcgcgacctt gtcgaaaaaa tgccgcaaga
     2701 cctcaacggt ctgcacgaca tctacggctt gggcgaagcc aaaatcgacc gtttcggaca
     2761 cggtatcctc gaagtctgcc gcaacgccgc cgactttagc cacgatgccg tcatccgtcc
     2821 gcaaaccgaa cgcgaacaac aactgcgtca aaaactcgaa gcctggcggt atgaacaggc
     2881 aagggcggaa aactgcgccc tgcatgccgt cctctccgac gaaagccttg ccgatatgct
     2941 tgccgccacg cccgaaaccg aaaccgacct cgaaggcgtg cacggcttgg gcagcgtacg
     3001 cgccgccaaa tacggacggg acatcctcgc cgtctgccgt ccgttttcag acggcatcga
     3061 tgaagccgcc aaacacaaac gccgcctgat gcgcgccctg attcaatggt gcggcgaaac
     3121 ggcaaaacac gaacagtccg aaccctaccg cattctcagc aaagccgccc tgcgcgccat
     3181 tgccgccaaa cagccggaag gtttggcgga gcttgccgcc gtatatggcg taggcgaaga
     3241 aaaagccgca cgttacggtg cggcggtgtt ggcggtattg gaacgaaatg ccgtctgaag
     3301 cccgttacca agtttcagac ggcattgcct ctatttaaaa attcctg
//
LOCUS       DBBZXW010000145         3286 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.145, whole genome shotgun sequence.
ACCESSION   DBBZXW010000145 DBBZXW010000000
VERSION     DBBZXW010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.145"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(301..1152)
                     /locus_tag="ACJJD2_001994"
     CDS             complement(301..1152)
                     /locus_tag="ACJJD2_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HGG7580460.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1500..3014
                     /gene="katA"
                     /locus_tag="ACJJD2_001995"
     CDS             1500..3014
                     /gene="katA"
                     /locus_tag="ACJJD2_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HGG7580461.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGVGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQAGLL"
     gene            3090..>3286
                     /locus_tag="ACJJD2_001996"
     CDS             3090..>3286
                     /locus_tag="ACJJD2_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580462.1"
                     /translation="MPSETSFDRFRRHFPIPPPPFQWAFFIKRKISRHSRPTAHFSAV
                     IPAPSPPVQTGTKTFPRHSRE"
BASE COUNT          799 a          931 c          835 g          721 t
ORIGIN      
        1 cccgacaaat tcccgccatc taaaatctcg ttatccatac aagaaccgaa aatcttgcca
       61 ttctcacaaa aacagaaatt caaaaacaga aatcccaaac ccccgtcatt cccgcgaaag
      121 cgggaatcca ggttcgttga gtttcggtca tttccgataa attcttgcag ctttgcgttt
      181 ctagattccc tctttcgcgg gaatgacggg atgcaggttt ccgcgcggac ggattcggca
      241 ttcccgcttt cgcagaaatg ccggcttttg gtttgttgtc tttataagat tattcggcaa
      301 ttattctgcg gttttgcgtt tgtgtgctgc cggaatctca aaggattctc tgtatttggc
      361 aatggtgcgg cgagaaacct ccatgccgcg gaaagccagc aggttggcga gcgcctcgtc
      421 agaatacggc gtgggcgtgg acgaggcaaa accggcggcg ggaaagggat tgagcgaagc
      481 aatgaggtcg agtgcggctt cgagtgtgcc gctgtcggtt tggggcaggc gtttttttat
      541 tcgcgcgagg gtttggctgc ggttgccgtc aatgctgtcg agggcgtttc ggacgatatg
      601 cagggcggag ggtttggcag cacattcgcc cgatctttct atctgcagta tcagcgattc
      661 gttcaaatcg gcggcggcca cgcctgccgg gtcgaatttt ttcaatgcgg tcagggcttg
      721 tttcagcatt gcttcatcca acatccactc caagggcgta tggtcgagga tgtcttcgat
      781 gctgtcggtc agataacctt gctcgtcaag gaaatcgatg aggatgtgga cacaggcgga
      841 ttcttggtcg gaaagcgggt gttcgcatac ttgcgcgtgc aggtattgct tgaaatcctg
      901 ctcgccggcg atgttggaca gcatatcttc gccttcgtct ccgccgattt gacgggcagg
      961 cgcagtgtaa tggctgaact cggcatcgga aaattcatcc gtgtctttgc gttcgagcag
     1021 ggggttgtcc gacagccagt tttcgacctc gcgttcaagt tcgatacccg acatctgcaa
     1081 tacgcgcaaa gattgttgca gccgctggtt gagctgctgg gtctgtttga gctttattcc
     1141 gagtaaggtc atgataatgt ggggaaaatt gttattttca gcctgtcggc gcaaaaaatg
     1201 ccgcaaagcg tcattgcatt ataaatggtt ttaatgagcg ggttcggatt ccgttcgata
     1261 acaaaaaaca aacgaaaatc aagaaccgat tgcttataat aatattaaat cgatttcata
     1321 gttttaatag cgaaaatctt ggcgtatagt cgcatccata gtttttacaa aagggaaata
     1381 aaatgtcgat tcaagaaatt tattgcaatc aagaaaccgg ttacgaatac gctttccgcc
     1441 aaatcgtact gtaagccgtt tacccccatt tgaccaacct gagaaaagga acaagagcga
     1501 tgactacctc caaatgccct gtaacccatc tgaccatgaa caacggcgcg cctgttgccg
     1561 acaatcaaaa cagcctgacc gccggtcctc gcggccctct gctggcgcag gatttgtggc
     1621 tgaatgaaaa actcgccgac ttcgtgcgcg aagtcatccc cgaacgccgt atgcacgcca
     1681 aaggttcggg cgcgttcggt acgtttaccg taacgcacga catcaccaaa tacacccgcg
     1741 ccaaaatctt cagcgaagtc ggcaaaaaaa ccgagatgtt cgcccgtttc accaccgtgg
     1801 caggcgaacg cggcgcagcc gatgcagaac gcgacatccg cggttttgcc ttgaaatttt
     1861 ataccgaaga aggcaactgg gatgtggtcg gcaacaacac gcccgtgttc ttcctgcgcg
     1921 acccgcgtaa gttccccgac ctgaacaaag ccgtcaaacg cgacccgcgc accaatatgc
     1981 gctctgccac aaacaactgg gacttctgga cgctgctgcc cgaagcactg caccaagtta
     2041 ccatcgtgat gagcgaccgc ggcatccccg ccggctaccg ccatatgcac ggcttcggtt
     2101 cgcataccta cagcttctgg aacgaagcag gcgagcgttt ttgggtgaaa ttccatttcc
     2161 gcacccaaca aggcattaaa aacctgacca acgaagaagc cgccaaaatc atcgccgacg
     2221 accgcgaaag ccatcagcgc gacttatacg aagccatcga acgcggcgag tttccgaaat
     2281 ggacgatgta catccaagtc atgcctgaag cagacgcgga aaaagtacct tatcatccgt
     2341 ttgacttgac caaagtttgg ccgaaaaaag actatccgct gattgaagtg ggcgaattcg
     2401 agttgaaccg caatcccgaa aacttcttcg ccgatgtgga acaatccgcc ttcgcaccga
     2461 gcaacctcgt tcccggtgtc ggcgccagcc cagataaaat gttgcaagcc cgtttgttca
     2521 attacgccga cgcgcaacgc taccgcttgg gcgtgaactt ccgccaaatc cctgtcaacc
     2581 gtccgcgttg ccctgttcac agcaaccagc gcgacggaca aggacgcgcc gacggcaact
     2641 acggcagcct gccgcactac gaacccaaca gcttcggcca atggcagcag cagcccgact
     2701 tcgccgaacc gcctttgaaa atcaacggcg acgcggcgca ctgggactac cgccaagacg
     2761 atgacgacta tttcagccaa ccgcgcgccc tgttcaacct gatgaacgac gcgcagaaac
     2821 aggcattgtt cggcaacacc gccgccgcaa tgggcgacgc gcccgacttc atcaaatacc
     2881 gccatatccg caactgctac cgttgcgatc cggcatacgg cgaaggcgtg gcaaaagccc
     2941 tcggactgac tgtcgaagac gcacaagccg cccgcgcgac cgaccccgca ctgggtcagg
     3001 ccggtttgct gtaagggggc attatgtgga tggaaattga agaaatcctg tcccgcgccg
     3061 tccgctaccg gaaataaccg ggcataaaaa tgccgtctga aacgtcgttt gaccgcttca
     3121 gacggcattt ccccatcccg cccccgccgt ttcagtgggc gttttttatt aaacgcaaaa
     3181 tatcccgtca ttcccgcccc acagcccact tttccgccgt cattcccgca ccatccccac
     3241 cggttcaaac cggcacgaaa acttttccgc gtcattcccg cgaaag
//
LOCUS       DBBZXW010000146         3263 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.146, whole genome shotgun sequence.
ACCESSION   DBBZXW010000146 DBBZXW010000000
VERSION     DBBZXW010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.146"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            443..1960
                     /locus_tag="ACJJD2_001997"
     CDS             443..1960
                     /locus_tag="ACJJD2_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7580463.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRLVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNQNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(2021..>3263)
                     /locus_tag="ACJJD2_001998"
     CDS             complement(2021..>3263)
                     /locus_tag="ACJJD2_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HGG7580464.1"
                     /translation="ELQADPKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFG
                     SVWQMTSTIQAQALPHTSFADILRAAFPCGSITGAPKKMSMQIIETLETEARGLYTGS
                     IGYLNPCSGGLGFEGTFNVVIRTLSLKPASASDGIVSGIGGPDSNVQARTAGQGEATP
                     YRFQVHPLYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETMRVENRQ
                     CALLDRHLCRLKAAAQALNLPLPDGCENQIKQYIADLPDGAFRVKALLASDGISLSRA
                     VLNHLADKQRVIISPAVLPAQNYLRRFKTTHRTLFDQAWQTAETQGAFDSLFFNSDGI
                     LLEGGRSNVFVKHRGQWLTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETHITQKTL
                     QEAEEIRLSNALRGVFAAALA"
BASE COUNT          649 a          720 c         1080 g          814 t
ORIGIN      
        1 ttaggtttct gattttggtt ttctgtcctt gtgggaatga cgggatgtag gttcgtagga
       61 atgacgtggt gcaggtttcc gtgcggatgg attcgtcatt cccgcttttg cgggaatgac
      121 ggcgacaggg ttgctgttat agcggattaa caaaaaccag tacggcgttg cctcgcctca
      181 gctcaaagag aacgattctc taaggtgctg aagcaccgag tgaatcggtt tcgtactatt
      241 tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccgcta taaatgtgaa
      301 atccgccctt tgaaaatcgg gcggcggttt tttgcctgcc tgctttcaga cggcaaagcc
      361 ggttttcacg ggtttctgcc tgtttttcgg atggtttgac gtgcttcggc ggcgtgtttg
      421 ccagaaaggt aaatgacagg gtatgttgta tttcagatac ggttttttgg ttgtttggtg
      481 tgcggcaggt gtttctgccg cctatggggc ggatgcgccc gcgattttgg atgacaaggc
      541 attgttgcag gtgcaacggt tggtgtcgga taagtgggcg gaatcggatt ggaaagttga
      601 aaatgatgcc ccgcgcgtgg ttgacgggga ttttttgttg gcgcatccga aaatgttgga
      661 acatagtttg cgcgacgcgc tcaacggcaa tcaggcggat ttaatcgctt cgttggcgga
      721 tttgtatgcc aagctgccgg attatgacgc ggttttgtac ggcagggcgc gggctttgct
      781 ggcgaaattg gcgggaaggc cggcggaggc ggtggcgcgg tatcgggaac tgcacgggga
      841 aaatgcggca gacgagcgga ttttgctgga tttggcggcg gcggagtttg acgatttccg
      901 actgaagtcg gcagaaaggc attttgcgga ggcggcaaaa ttggatttgc cggcaccggt
      961 tttggaaaat gtggggcgtt ttcggaaaaa aacggagggg ctgacgggct ggcgtttttc
     1021 gggcggcatc agtccggcgg tcaatcaaaa cgccaataat gccgcgccgc agtattgccg
     1081 gcaaaacgga ggccggcaga tatgcagtgt cagccgggcg gagcgggcgg cagggttgaa
     1141 ttatgaaatc gaggcggaaa aactgacggc gttggcagat aatcattatt tgttgttccg
     1201 ttccaatatc ggcggcacga gctattattt cagtaaaaaa tcagcttatg acgacgggtt
     1261 cggcagggcg tatttgggtt ggcagtataa aaatgcacgg cagacggcgg ggattttgcc
     1321 gttttatcag gtgcagttgt cgggcagcga cggctttgat gcgaaaacaa aacgggtaaa
     1381 caaccgccgc ctgccgccgt atatgctggc gcacggagtc ggcgtgcagc tgtcccatac
     1441 ttaccgacca aacccgggat ggcaattttc ggtcgcgctg gaacattacc gccaacgcta
     1501 ccgcgaacag gatagggcgg aatacaataa cggcaggcag gacgggtttt atgtttcgtc
     1561 ggcaaaacgt ttgggcgaat cggcaactgt gttcggcggc tggcagtttg tgcggtttgt
     1621 gccgaaacgc gaaacggtgg gcggcgcggt caataatgcc gcctaccggc gcaacggtgt
     1681 ttatgccggt tgggcgcagg agtggcggca gttgggcggt ttgaacagtc gggtttccgc
     1741 gtcttatgcc cgccgcaact ataagggcgt tgcggctttc tcgacagagg cgcaacgcaa
     1801 ccgcgaatgg aatgtctcgc tggctttgag ccacgacaag ttgtcgtata aaggtatcgt
     1861 gcccgcgttg aattatcgtt tcggcaggac ggaaagtaat gtgccgtatg cgaaacgccg
     1921 caacagcgag gtgtttgtgt cggcggattg gcggttttga atggtggaat aatgccgtcc
     1981 gaactttgtg gaaacaggtt cggacggcat ttttgcgcgt tcaggcaagg gcggcggcaa
     2041 atacgccgcg caaggcgttg gagaggcgga tttcttcggc ttcttgcagt gttttttgtg
     2101 tgatgtgtgt ttcgattact tgatttgttt gcaaatattt ttgcggttcg tccaacacgg
     2161 cttggcgcat tatgccgttt aaaatgtcta aatctaaaga gggcgtgagc cattgtccgc
     2221 gatgtttgac gaacacgttg cttctgccgc cttcgagcag gatgccgtct gaattgaaaa
     2281 acaggctgtc gaacgcgcct tgtgtttcgg cggtttgcca cgcttggtcg aagagagtgc
     2341 ggtgggtggt tttgaagcgg cgcaggtagt tttgtgcggg caggacggcg ggcgaaatga
     2401 tgacgcgttg tttgtcagcc aaatggttta aaacggcgcg ggacaggctg atgccgtctg
     2461 aagcgagcag ggctttgacg cggaacgcgc cgtcgggcaa gtcggcaatg tattgtttga
     2521 tttgattttc gcagccgtcg ggcaggggca ggttgagggc ttgggcggcg gctttcagac
     2581 ggcataggtg gcggtcgagt agggcgcatt gcctgttttc cacgcgcatg gtttcaaaaa
     2641 tgccgaagtc ggggcgcaat tcgttgagga aacgggcttt ccagccgcat tcgcgatatt
     2701 cggcggcggg atcgctgtcg atgacgatgc cggaaccgac gccgtacacc ccttgataga
     2761 gtggatgaac ttgaaaccgg tacggcgttg cctcgccttg ccctgccgtt cgggcttgca
     2821 cgtttgaatc tgggccgccg atgcctgaaa caatgccgtc tgaagccgaa gcaggtttga
     2881 gcgacaaggt gcggataacg acgttgaacg tgccttcaaa ccccaagccg ccggaacacg
     2941 ggttcaaata gccaatgctg cccgtataaa gtccgcgcgc ttcggtttcg agcgtttcga
     3001 taatctgcat actcattttt ttgggcgcgc cggtgatgct gccgcagggg aaggcggcgc
     3061 ggaggatgtc ggcgaacgag gtgtgcggca aggcttgggc ttggatggtg ctggtcatct
     3121 gccagacgct gccgaaacgc gatactttaa acggctcggg tacgcatact ttgccggttt
     3181 gggcgatttt gccgaggtcg ttgcgcagca aatcgacaat catcacgttt tcggcgcggt
     3241 ttttcgggtc tgcttgcaac tcg
//
LOCUS       DBBZXW010000147         3247 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.147, whole genome shotgun sequence.
ACCESSION   DBBZXW010000147 DBBZXW010000000
VERSION     DBBZXW010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.147"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>3247
                     /locus_tag="ACJJD2_001999"
     CDS             <1..>3247
                     /locus_tag="ACJJD2_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7580465.1"
                     /translation="YITGKEKGVLAAQAGKDINIIAGQISNQSEQGQTRLQAGRDINL
                     DTVQTGKHQATHFDADNHVIRGSTNEVGSSIQTKGDVTLLSGNNLNAKAAEVSSANGT
                     LAVSAKNDINISAGINTTHVDDASKHTGRSGGGNKLIITDKAQSHNETAQSSTFDGRQ
                     VVLQAGNDANILGSNVISDNGTRIQAGNHVRIGTTQTQSQSETYHQTQKSGLMSAGIG
                     FTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVAGKHYEQIGSTVSSPEGNNIIHAQ
                     SIDIQAAHNKLNSNTTQTYEQKGLTVAFSSPVTDLAQQAIAVAQSSKQVGQSKNGRVN
                     AMAAANAGWQAYQTGKSAQNLANGTTNAKQVSISITYGEQQNRQTTQVQASQAQASQI
                     QAGGKTTLIATGAAEQSNINIAGSDIAGKAGTILIADNDITLQSAEQSNTERSQNKST
                     GWNAGAAVSFGQGGWSLGVTAGGNVGKGYGNGDSVTHRHSHIGDKGSQTLIQSGGDTT
                     IKGAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNASAQVTVGYGFSASGDYSQSKIR
                     ADHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSSQSAEDKGKNRFQTATLTTSDI
                     QNYSQYQGKSFGLGASVAVSGKTLGQGAQNKPQNKHLTSVADKNGASSSVGYGSDSDS
                     QSSITKSGINTRNIHITDEAGQIRLTGKTAAQTKADIDTNVTTDTAERHSGSLKNTFN
                     KEAVQSELDLQREVTQEFDKTRQGVKQELYAVVDSKREQATKERLKNGGYDNDKSRAL
                     NKEANELDEKIRWLDAGLGLVWGAGSSDMAWSMFATTQADRAVRSATAPKEMWFHKKI
                     IDEKTGKVSFDTRQIWSLNDLSKEELASIQDTNGKVITVSNPGIFNNREDSLSNAAKQ
                     NRNSTNGSGVIAVMNPPTGKYKSDSNNKIKDSLWLSSSLVSELMYVGYDQLNNKVFQG
                     YLPKTNSEKLNQDIYREVQKMDNGWSVDTSNHSRGGITASVSLKDWVNNKEQNGIAPI
                     RKARFYGTATNVKNDYADVLQKNGYTYTGADGKTYNSGAYSIVHDKDFVGNK"
BASE COUNT         1173 a          759 c          718 g          597 t
ORIGIN      
        1 tatatcacag gcaaagaaaa aggtgtttta gcagcgcagg caggcaaaga catcaacatc
       61 attgccggtc aaatcagcaa tcaatcagag caagggcaaa cccggctgca agcagggcgc
      121 gacattaacc tagatacggt acaaaccggc aaacatcaag caacccattt tgatgccgat
      181 aaccatgtta ttcgcggttc aacgaacgaa gtcggcagca gcattcaaac aaaaggcgat
      241 gttaccctat tgtcagggaa taacctcaat gccaaagctg ccgaagtcag cagcgcaaac
      301 ggtacactcg ctgtgtctgc caaaaatgac atcaacatca gcgcaggcat caacacgacc
      361 catgttgatg atgcgtccaa acacacaggc agaagcggtg gtggcaataa attgattatt
      421 accgacaaag cccagagcca caacgaaacc gctcaaagca gcacctttga cggcaggcaa
      481 gttgtattgc aggcaggaaa cgatgccaac atccttggca gcaatgttat ttccgataat
      541 ggcacccgga ttcaagcagg caatcatgtt cgcattggta caacccaaac tcaaagccaa
      601 agcgaaacct atcatcaaac ccagaaatca ggattgatga gtgcaggtat cggcttcact
      661 attggcagca agacaaacac acaagaaaac caatcccaaa gcaacgaaca tacaggcagt
      721 accgtaggca gcttgaaagg cgataccacc attgttgcag gcaaacacta cgaacaaatc
      781 ggcagtaccg tttccagccc agaaggcaac aatatcatcc atgcccaaag catagacatt
      841 caagcggcac acaacaaatt aaacagtaat accacccaaa cctatgaaca aaaaggctta
      901 acggtggcat tcagttcgcc cgttaccgat ttggcacaac aagcgattgc cgtcgcacaa
      961 agcagcaaac aagtcggaca aagcaaaaat ggtcgtgtca atgccatggc agctgccaat
     1021 gcaggctggc aagcctatca aacaggtaag agtgcacaaa acttagccaa tggtacaacc
     1081 aatgccaaac aagtcagcat ctccataacc tacggcgaac agcaaaaccg acaaaccacc
     1141 caagttcaag caagccaagc ccaagcgagt caaattcaag caggcggtaa aaccacatta
     1201 atcgccacag gcgcagcaga acaatccaat atcaacatcg caggctcaga tattgccggc
     1261 aaagcaggca caatcctgat tgccgataac gacatcacac tccaatcagc cgagcaaagc
     1321 aataccgaac gcagccaaaa caaatcgaca ggttggaacg caggtgctgc cgtatcattc
     1381 ggacaaggag gctggtcatt aggcgttacc gcaggcggca atgtcggcaa aggctacggc
     1441 aatggcgata gcgtaaccca ccgccatagc catattggcg acaaaggcag ccaaaccctt
     1501 atccaaagcg gtggcgacac taccatcaaa ggcgcgcaag tacgcggcaa aggcgtacaa
     1561 gtcaatgcca aaaacctaag tattcaaagc gtacaagata gagaaactta tcaaagcaaa
     1621 caacaaaacg ccagtgcaca agtgaccgta ggttatggct tcagtgccag tggcgattac
     1681 agtcaaagca aaatccgagc cgaccatgct tcagtaaccg agcaaagcgg tatttatgcc
     1741 ggagaagacg gctatcaaat caaggtcgga aaccatacag acctcaaagg cggcatcatc
     1801 accagcagcc aaagcgcaga agacaagggt aaaaaccgct ttcagacggc cacccttact
     1861 accagcgaca ttcaaaatta cagccaatac caaggaaaaa gttttggatt gggtgccagc
     1921 gttgccgtaa gcggcaaaac actgggacag ggcgcacaaa ataaacctca aaacaaacac
     1981 ctgacaagcg tagccgataa aaacggcgca agttcatcag tgggttatgg cagcgacagc
     2041 gacagtcaaa gcagcatcac gaaaagcggc atcaacaccc gcaacataca catcaccgac
     2101 gaagcgggac aaatcaggct gacaggcaaa acagcggcac aaaccaaagc cgatattgat
     2161 acaaacgtaa ccacagacac cgccgaacga cattcgggca gcttgaagaa caccttcaac
     2221 aaagaagcgg tgcaaagtga actggattta caaagggaag taacccaaga gtttgataaa
     2281 actagacaag gagtgaaaca agaactttat gcagtagtag atagcaaacg agagcaagcc
     2341 acaaaagaga gactcaaaaa tggtggatat gacaatgata aatctagagc attaaataag
     2401 gaagctaatg aattagatga aaaaattcgt tggcttgatg cgggattagg actcgtttgg
     2461 ggagcaggga gttctgatat ggcttggagt atgtttgcca caacccaagc cgatagagcg
     2521 gtaaggtctg caactgcacc taaagaaatg tggttccata agaagataat agatgaaaaa
     2581 acaggtaaag tatcctttga taccagacaa atttggtcat tgaatgattt aagcaaggaa
     2641 gaactggcaa gcattcaaga cacaaatggc aaagttatta ctgtgtctaa tcctggtatt
     2701 ttcaataatc gagaagattc attaagcaat gcagcaaaac aaaatcgtaa tagtacaaac
     2761 ggtagtggtg ttattgcagt tatgaatcct ccaacaggga aatataaatc tgattctaat
     2821 aacaaaataa aagattcttt atggctcagt tcaagtcttg tttctgaact gatgtatgtc
     2881 ggttacgacc aattaaataa taaagtgttc caaggctatt tacccaaaac caattcagaa
     2941 aaactgaatc aagatattta tcgagaggtt caaaaaatgg ataatggctg gtctgttgat
     3001 accagtaacc acagtcgtgg gggaattaca gcaagcgttt ccctaaaaga ttgggtaaac
     3061 aataaagagc aaaatggcat tgccccaatc agaaaagcac gtttctatgg tacagccaca
     3121 aatgtgaaga atgattacgc cgatgtttta cagaaaaacg gctataccta tacgggtgca
     3181 gacggtaaaa cttataacag cggagcctac tcaatcgtgc atgataaaga ttttgtgggg
     3241 aacaaat
//
LOCUS       DBBZXW010000148         3209 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.148, whole genome shotgun sequence.
ACCESSION   DBBZXW010000148 DBBZXW010000000
VERSION     DBBZXW010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.148"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(59..1468)
                     /gene="dacB"
                     /locus_tag="ACJJD2_002000"
     CDS             complement(59..1468)
                     /gene="dacB"
                     /locus_tag="ACJJD2_002000"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HGG7580466.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLSHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGNGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1633..2199
                     /locus_tag="ACJJD2_002001"
     CDS             1633..2199
                     /locus_tag="ACJJD2_002001"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HGG7580467.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
     gene            2769..>3209
                     /locus_tag="ACJJD2_002002"
     CDS             2769..>3209
                     /locus_tag="ACJJD2_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HGG7580468.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSS"
BASE COUNT          718 a          749 c          919 g          823 t
ORIGIN      
        1 agtttgtcct agttatctag gacagcccct taaatttaat ccactatatt ttcctgtttc
       61 aggctcggcg ttctttgcac atcagtttcg catccagcca gccatcgccg ccggagatga
      121 tgttgttggc aacgaagttg tccaagtcgg gcagcaggga aacggcgcgg ccgctgttga
      181 tgatgacgac caccgccatc ggtttgtcgc ccagccaata acctgcaagg gcgcggacat
      241 tgttgagcgt gccggttttt aagcgcaaca gcccgccgct ttgtttgaag cggttgcgta
      301 aagtcccgtc tgtgccggcg atgggcagcg tatcgatgaa atcttgtgca aacgggctga
      361 aataagccgt ttccaacatt tgcgccatca ttctcgccgt taccctttct tttctagaca
      421 gacctgaacc gttttccaaa accaaatccg caacatcgat gcccgacacg gcaagttcac
      481 gccggacggc agacgctgcc tgttcggaaa cggcgggcag tttgccgttg ccgccgagtt
      541 tgaggaagac ggaacgcgca attagattgt ccgaacgctt gttcatgtcc gtcaaaattt
      601 ccttcatcgg tttggcgtgt gcaacggcaa gcgtctgcgc gccttccggc gtgtcggcta
      661 tgccgatacc gtctgaaatc cgtccgccgc cgagcagcca gtggttggta aaactttgcc
      721 ggatcagttc gtcaagcgcg aacatccgga caccgacagg cttgcccaaa cagctctcgg
      781 gaatattgcc gcgcaatttc agcgtattgt ccgaaaaaga tgcacgcatc agttttttga
      841 tcgaagggca ggcagcttgg gaggcggtaa ttttcaagtt gttttgggcg aaaatatgcg
      901 acaaaggcgg atcggtgagg atgtcggtac tgtcggcggc attgcgttcg gcgcgcacca
      961 taaccatacc ggcagacagc atagttggat tggggggcgt cataaacggc gaaccgctgt
     1021 cggcttcgaa atcgtcgggg ctgccgactt cgccccacag gctgtggtcg agcatcaggt
     1081 gtcccgtgat attgcgtatg ccttgttcgc gcaactggcg ttggacggca agcaggtttt
     1141 cctgattgaa aacggggtcg ccgctgcccg cccaatacag gtttccgtca agcgtgccgt
     1201 cgtttaccgt accgttgctt ttaaactcgg tcgcccagcg gtaattgctg ccgaaggttt
     1261 tgaaggcggc aaacgcggta acgagtttca ttgtggaggc ggggttgacg gggacatccg
     1321 agcggtggtc aatgatgact tttccgctgt caagctcttg gacatatacg gcgatttcgt
     1381 tttgcggaat gcgacccgta tcgagcgcgt gtgcggcgag ggaggcgaga agcagcagca
     1441 gggaggccgc tgttttgggg aaattcatag gtaaatctgt tacataaaaa aagcaattat
     1501 aaggcaaagc cggataagtg ggaacgctgt ggcggcgggc cggcttgttt gcaggggaaa
     1561 tcacatatat aataatcgct atcattatga aatgattgag acgcacaaac ttaatattca
     1621 ggaggaatga ttatggctaa gaaaatcagt attttggtgg gcagcctgcg ccgtgcttct
     1681 tttgcgcgca aagtggcatt gaatgcggcg gagatgttcc ccgaaggctg gcaggcggaa
     1741 atcgtcgaaa tcggacatct gccgctttac aatttcgatt atgacgaccc tgcggtggaa
     1801 gatgtgccgc tgcccgaaag ctacacggct ttccgcgaaa cgattaaggc ttcggacggc
     1861 attttgttcg ttacgtccga aaataaccgc accattcccg cctgtttgaa aaatgcggtg
     1921 gacatcggtt ctaaaccgaa tgccgatgtg gcttggaaaa acaaaccggc cggcatcatc
     1981 agccattccg tcggcaagat ggggggatac agttcgcaaa aaaacctgcg ccttgcgctg
     2041 tcttatttcg atatgcccgt aaccggacag ccggaagtgt ttttgggcaa ttcgccgaca
     2101 ctgtttgatg aaaacggcaa attgattgac tcggcaaggg attttgttca gtcatatatt
     2161 aatcagtttg tcggtttgat tgaaagaaat gccaaataaa caaaccaagt cgaaaagccg
     2221 caaaaccggt tcgggttttg cggctttttt atatgggctg ggcagcgtca aggtttgccg
     2281 tttgccggat aatgcgcggc aaatgaccgg cgtgtttata gtggattaac aaaaaccagt
     2341 acggcgttgg ctcgccttag ctcaaagaga acgattctct aaggtgctga agcaccaagt
     2401 gaatcggttc cgtactattt gtactgtctg cggctcgccg ccttgtcctg atttttgtta
     2461 atccactata aaatcccgcg tgtacggcac gccccgcgct ccgcaatgat aggggcggtt
     2521 tcgtttgaat cggcgcaccg ggatgaatgc ccccgcgccg tctcgatacc gatttaccgg
     2581 ttgttccgta tcggttgccg ccgtgaaatg acggacggat gcaggaatga cggcagacgg
     2641 gaggcggagg aaatgattga ttgacttatt ttaaaataaa aaagtagaat gcagggctta
     2701 ttccgcgtct gtggacggtt ttgcctgcac ggtcggtttt ctgtttaaaa taaaataaag
     2761 gagaaatgat gctgacgttt atcggactgc tgattatcgg ggtcatcgta tggttgctgc
     2821 tgacggaaaa agtgtcgccc atcatcgcat taatcttggt gccgctgttt ggggcgttgc
     2881 tggcggggtt tgatgtatcc caattaaaag aattttattc gggcggcacc aaatcggtga
     2941 tgcagattgt gattatgttt atgttttcca ttttgttttt tggaatcatg aacgatgtgg
     3001 ggctgttccg tccgatgata ggcggtttga ttaagctgac tcggggtaat atcgtggcag
     3061 tgagtgtggg gacggtcttg gtgtcggtgg tggcgcagtt ggacggggcg ggtgcgacga
     3121 cgtttttatt ggtcgtcccc gcccttttgc cgctttacaa gcgtctgcat atgaatcctt
     3181 acctgctgtt tttgctgctg acttccagt
//
LOCUS       DBBZXW010000149         3175 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.149, whole genome shotgun sequence.
ACCESSION   DBBZXW010000149 DBBZXW010000000
VERSION     DBBZXW010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3175
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.149"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            52..1005
                     /locus_tag="ACJJD2_002003"
     CDS             52..1005
                     /locus_tag="ACJJD2_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HGG7580469.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHNVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1116..1439)
                     /locus_tag="ACJJD2_002004"
     CDS             complement(1116..1439)
                     /locus_tag="ACJJD2_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580470.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1612..2973)
                     /locus_tag="ACJJD2_002005"
     CDS             complement(1612..2973)
                     /locus_tag="ACJJD2_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HGG7580471.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTIIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSSKLGFDLSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPVPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGT
                     DWE"
BASE COUNT          746 a          931 c          766 g          732 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgc
      361 accaagcgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatctcgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggt tttctgcccg gtgacctgac ccagaaagtc
      601 gatccctacc ttcgtccgct ttatgatgcc ctctatgacc tgatgggctt tgaccgtgta
      661 accaagctga ttgaaaaagg cctgattgaa atcgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 aacgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctctg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa atcgggcaga gaaaaacaga tacggaagcc aagctccgta
     1081 tccgtatccg tttctttatc cgtccaaccg atacatcaat cgaattttct gcatcggatt
     1141 gcctcatctt cgcaaaacat tgccgaagtt tcgcggttgc acgcctgacg cactttctgc
     1201 cgcgccacgc cttcattccg atcgcttgcc tcaaacgtct tctgaaaagg cgtaacgctg
     1261 catacataca tggtggaatt tgaaccgaaa aggtcgattt tgacggtatt gctgccgctt
     1321 tccaatacgg cgacacggtg ttccaactgc gccagacgtg cttccaaatc gccgattctg
     1381 tcggcaaatg caggcatggc ggcacacgcg gtcaaaatgc ccaaaataca ttttttcatc
     1441 aatttttcct tgtttcttga accctgccca cccggacatc ctttttccga gaggcagggt
     1501 tagactttat ttacggggat gaatcccctt acaaatcagg ataatacata gaacggcact
     1561 ttatgcttca tcccatgtgt tgaaacttca ttgctccttg tctgttgacc cttattccca
     1621 atccgttccc acaaccttcg gcttgggttt gcgcctgcga cggcggcgtt ttttcgcctg
     1681 tccttcgttt ttttcgtgtc gggcggcggc ttcgtttttg gtcatctccg accgctgttc
     1741 cgtcgatgcc gtctgaaacg ccgtccacca ctcggcaagg gcgcggtccg cattgccggt
     1801 ttcggcgcgc aagagcagga aatcataggc ggcacggaaa cgcgcctgtg caaacagttt
     1861 gtgcggacgt gcgcctttgc gattttcaaa ctgcggctgg aacatccaaa tttcgcgcat
     1921 cgtggcggaa aagcgttgcg gcacgcccca accgcgttcg acggtttcgc gcatcgtatt
     1981 gattgcatcg gacagggcgg gcacgggttt caaaccctgt tgcagattgc ttttccaatg
     2041 gcgttccaac tcgggccaca tcagggccgc cagtacgaaa ccgaccgaaa ccgatttgtc
     2101 ggcacgcagc cgctcatcgg tatttttcag ggcaagcacc gtcatttttc cggcgatgcc
     2161 gtctgaaacg cgcaaggcat tgagcagcgg atggatgtcg tccggtatgt caaatccgtt
     2221 caaacgtttc agacactcgc gcgcgtgccc tgaaaacagc agtttcataa tttcgtcgaa
     2281 cagccgcgct accggttcgt gcttcagacg gcatatcgat tcggcaatcg gtgcggcggt
     2341 ttcttccgac agatcaaagc ccaatttgct cgacaggcgg atggcgcgca aaatcctgac
     2401 agggtcttcc tgatagcgtt cggcggcatc accaatcata accagcctgc gggcggcaac
     2461 atcggcaatc ccgttgtgga aatccaaaat ctcttctttt tcaggatcgt aatacaaggc
     2521 attgcaggta aaatcgcgcc gcatcgcatc ttcttcgatg ctgccgtagg tgttgtcctt
     2581 catgattctg ccgtgcgcgt tctgatgaac cttcgcaccg ccgcgaaacg tcgttacttc
     2641 gataatctcc gcaccgttca tcacatggac aatctgaaaa cgcctgccga tgatgcggct
     2701 gcggcggaag agtttgtgca cctgttcggg cgtggcatcg gttgcgacat cgaaatcctt
     2761 gggttcgatg ccgagcagca ggtccctgac cgcgccgccg accacataag cctgaaaccc
     2821 cgcccctttc aggcggcgta tgacgttttc ggcggcaaag ctcaacattt cggcacggat
     2881 gttgtgtctt tcggcaggaa tgattgtttt actttccgct tttttactgc tccgaccgga
     2941 aggcagcatc ttattcaacc attttttcag cataaatatt ctaacccgaa gagcggcatc
     3001 tccacgggca accgtgttca gacggcatca ggcggtacga ttccgcaaga tgccgtaacc
     3061 ataaacaaaa ggcgtagaaa ctacgccgtc cgaatcacgc cgccctcgcg gcggcggcaa
     3121 cgcgccatta taacagattg ccctttaaaa aaatcagacc ctgcttttgt ggcgg
//
LOCUS       DBBZXW010000150         3128 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.150, whole genome shotgun sequence.
ACCESSION   DBBZXW010000150 DBBZXW010000000
VERSION     DBBZXW010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.150"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..212)
                     /locus_tag="ACJJD2_002006"
     CDS             complement(<1..212)
                     /locus_tag="ACJJD2_002006"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580472.1"
                     /translation="MLPTRKTARKIQARHIALPFSGKPQFYRPQERLSKQAQATPPGH
                     FRFHRLSVVRIMQQHHQRITLFGRQQA"
     gene            272..895
                     /locus_tag="ACJJD2_002007"
     CDS             272..895
                     /locus_tag="ACJJD2_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HGG7580473.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1006..2388
                     /locus_tag="ACJJD2_002008"
     CDS             1006..2388
                     /locus_tag="ACJJD2_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7580474.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSIITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNRDGLQRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2392..2916
                     /locus_tag="ACJJD2_002009"
     CDS             2392..2916
                     /locus_tag="ACJJD2_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HGG7580475.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          626 a          841 c          951 g          710 t
ORIGIN      
        1 gcctgctgcc gcccgaaaag cgtgatgcgc tgatggtgct gctgcataat ccggacgacg
       61 gataaccggt gaaaacggaa atgcccgggc ggtgttgcct gtgcctgttt ggacaagcgt
      121 tcttgagggc ggtagaattg aggtttgccc gaaaagggca gggcgatatg ccgcgcttgg
      181 attttgcgcg cggtttttcg cgttggaagc aatcattgtc tgtttgaata tttaatgccg
      241 tctgaaacgt ccggacgcgc ccccgttccc tatgaaaaaa ccgaccgata ccctacccgt
      301 taatctgcaa cgccgccgcc tgttgtgtgc cgccggtgcg ttgttgctca gtcctctggc
      361 gcacgccggc gcgcaacgtg aggaaacgct tgccgacgat gtggcttccg tgatgaggag
      421 ttctgtcggc agcgtcaatc cgccgaggct ggtgtttgac aatccgaaag agggcgaacg
      481 ttggttgtct gccatgtcgg cacgtttggc aaggttcgtc cccgaggagg aggagcggcg
      541 caggctgctg gtcaatatcc agtacgaaag cagccgggcc ggtttggata cgcagattgt
      601 gttggggctg attgaggtgg aaagcgcgtt ccgccagtat gcaatcagcg gtgtcggcgc
      661 gcgcggcctg atgcaggtta tgccgttttg gaaaaactac atcggcaaac cggcgcacaa
      721 cctgttcgac atccgcacca acctgcgtta cggctgtacc atcctgcgcc attaccggaa
      781 tcttgaaaaa ggcaacatcg tccgcgcgct tgcccgcttt aacggcagct tgggcagcaa
      841 taaatatccg aacgccgttt tgggcgcgtg gcgcaaccgc tggcagtggc gttgattttg
      901 aacccgcgcc gcaaccgaaa tacggcgaat cctgtataat ccgaaaatct gttcactgga
      961 agttcagacg gcattgcaac tgttgatgcc gtctgaaaaa atatgatggc aagagacaac
     1021 cgcatccaaa tgtttccgca cgaatggcgc gccagtacga cgctttccgg cgtgtacgcg
     1081 ctgcgtatgc tgggtatgtt cctcgtgctg cccgtattgg cggtgtatgc cgcctcgctg
     1141 cccggcgcgg aaggcaacaa aacgctggtc gggctggcaa tgggcattta cgggctgaca
     1201 caggctctgc tgcaactgcc tttgggcatc gcttccgaca agttcgggcg caagaaaacc
     1261 atttatgtcg ggctgattgt gtttgcagcg ggcagcttcc ttgccgccgc cgccgatacg
     1321 ctgcccatgc tggtcgccgc acgcgccata cagggtgcgg gagcggtcag tgcggcggtt
     1381 accgcgctgc tggcggattt gacgcgcgac ggagtacgta cccgcgcgat ggcgatgatc
     1441 ggtttgagta tcggtctgac gttttcggtc agcctcgtcg ttgcccctgt gattgccgac
     1501 gcggtgggcg tacgcggctt gtttctgctg accggtattt tgaccgttgc cagtatcggc
     1561 gtggtggcgt ggatgactcc cgacccggag gtttccaagc tgcacgaaga tacgcaggcg
     1621 cagccttcgc gcataggcga agttttgaaa aaccgtaggc tgctgacgct cgatttcggc
     1681 attttcgccc tgcacgccgc gcaaatggca ttgtttaccg cgctgccttt tgcgatgacg
     1741 cagctcggtt tggaaaaaat ccagcattgg aaagtctatc tgccctcgat cattacgggc
     1801 ttggtggtga tggttccgct gattatcgtc ggcgagacgc gcaacaagct caaacaggtt
     1861 tttgttttgg gtatcgtctg tattgcggcg gcgcagctcg gtttgctgtc cggtatgcgc
     1921 tcggtaggct tgattaccgc ttatttggtt gtttacttta tcggttttaa tgtgttggaa
     1981 gcgagcctgc cgtctatggt ttccaaaatc gcgccgtccg acctgaaggg tacggcgatg
     2041 ggtgtgtaca acacgatgca gtcgctcgga ctgtttgccg gcggcgcggc aggcggcttg
     2101 ctgtttcaaa aatacggctt ttccggcgtg tttgcctttt gcagcatatt gatgctgctg
     2161 tggctggtaa ttgccgtttt atcgcctgcg cccaagcccg tcaaaaacct cagttaccct
     2221 gtcggcggcg tgtggcaggg caatcgggac ggtttgcaac gcgccttgtc ggagcttgag
     2281 ggcgtggaag acatcggttt cagtttcgac gggcagaccg tctatcttaa agtgttgcag
     2341 aagggtttcg atcaggctgc cgctgaaaaa atcatcacag gagtttaaaa aatgtcattg
     2401 aacaaagtca tcctcatcgg ccgcctcgga cgcgatcccg aagtgcgcta tatgcccaac
     2461 ggcgaggcgg tgtgtaattt cagcgtcgcc accagcgaaa cttggaacga ccgcaacggc
     2521 caacgtgtag agcgtactga gtggcacaac atcacgatgt accgcaaact ggcggaaatt
     2581 gccgggcaat acctcaaaaa aggcgggctg gtttatctgg aaggcagaat ccaaagccgc
     2641 aaataccaag gcaaagacgg catcgaacgc accgcttacg atattgtcgc caacgaaatg
     2701 aaaatgttgg gcgggcgcaa tgaaaacagc ggcggtgcgc cttacgagga aggttacggt
     2761 cagagtcagg aggcttacca acgccccgcg cagcaaagcc ggcagcccgc ctccgacgcg
     2821 ccgtcccatc cccaagaagc accagccgcg ccgcgccgcc aacccgtgcc tgccgccgcc
     2881 ccggtcgagg acattgacga cgatatcccg ttctgaattt tacggccgga catcctcgcg
     2941 gagggaaatc ataaaggacg gagaaacctt aaaccttacg gggcagggtt tctctttttt
     3001 gcatttgggc cggcttgttg ccgccctttg cgttgggcgg aacgttgcga ttgcgccgtt
     3061 cgggcgtttt gaggcagtga tgcctgccgc acgtccccgc tgttttcaga cggtatagtg
     3121 gattaaca
//
LOCUS       DBBZXW010000151         3056 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.151, whole genome shotgun sequence.
ACCESSION   DBBZXW010000151 DBBZXW010000000
VERSION     DBBZXW010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.151"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..211
                     /locus_tag="ACJJD2_002010"
     CDS             <1..211
                     /locus_tag="ACJJD2_002010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580476.1"
                     /translation="VIPAKAGIQQPKNHRNLSAKTETPTASFPQKLESKNATQQEFIG
                     KNRNPTDRHSRKSGNPDPSARNLTG"
     gene            490..897
                     /locus_tag="ACJJD2_002011"
     CDS             490..897
                     /locus_tag="ACJJD2_002011"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580477.1"
                     /translation="MIESIEKPQESIRKNRNPHRVIPAQAGIQKHNAAGLYRKKPKPH
                     RPSFPQKRESKNATQQESIGKNRNPTDRHSRKSGNPATEKPQESISKNRNPTAVIPAK
                     AGIQTRRHGNLPNKTVSLDSTSQIPAFAGMTRF"
     gene            1009..2793
                     /locus_tag="ACJJD2_002012"
     CDS             1009..2793
                     /locus_tag="ACJJD2_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR-type extended signal peptide-containing
                     protein"
                     /protein_id="HGG7580478.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLF
                     ATVQANATDDDDLYLEPVQRTAVVLSFRSDKEGTGEKEGTEDSNWAVYFDEKRVLKAG
                     AITLKAGDNLKIKQNTNENTNDSSFTYSLKKDLTDLTSVETEKLSFGANGNKVNITSD
                     TKGLNFAKETAGTNGDPTVHLNGIGSTLTDTLLNTGATTNVTNDNVTDDEKKRAASVK
                     DVLNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGKKTEVKI
                     GAKTSVIKEKDGKLVTGKGKDENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQ
                     TGQADKFETVTSGTNVTFASGKGTTATVSKDDQGNITVKYDVNVGDALNVNQLQNSGW
                     NLDSKAVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMAPQFS
                     SVSLGAGADAPTLSVDDEGALNVGSKDTNKPVRITNVAPGVKEGDVTNVAQLKGVAQN
                     LNNRIDNVDGNARAGIAQAIATAGLVQAYLPGKSMMAIGGDTYRGEAGYAIGYSSISD
                     GGNWIIKGTASGNSRGHFGASASVGYQW"
     gene            2926..>3056
                     /locus_tag="ACJJD2_002013"
     CDS             2926..>3056
                     /locus_tag="ACJJD2_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7580479.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     "
BASE COUNT          977 a          794 c          710 g          575 t
ORIGIN      
        1 cgtcattccc gcaaaagctg gaatccagca accgaaaaac cacaggaatc tatcagcaaa
       61 aacagaaacc cccaccgcgt cattcccgca aaagctggaa tccaaaaacg caacgcaaca
      121 ggaatttatc ggaaaaaaca gaaaccccac cgaccgtcat tcccgcaaaa gcgggaatcc
      181 agacccgtcg gcacggaatc ttaccggata aaacagtttc cttagattcc acgtcctaga
      241 ttcccgcctt cgcgggaatg acgagatttt agattatggg aatttatcag gaatgattga
      301 atccatagaa aaaccacagg aatctatcag aaaaaacaga aacccccacc gcgtcattcc
      361 cgcgcaggcg ggaatccaga cccgtcggca cggaaactta ccggataaaa cagtttcctt
      421 agattccacg tcctagattc ccgctttcgc gggaatgacg agattttaga ttatgggaat
      481 ttatcaggaa tgattgaatc catagaaaaa ccacaggaat ctatcagaaa aaacagaaac
      541 ccccaccgcg tcattcccgc gcaggcggga atccagaaac acaacgcggc aggactttat
      601 cggaaaaaac cgaaacccca ccgaccgtca ttcccgcaaa agcgggaatc caaaaacgca
      661 acgcaacagg aatccatcgg aaaaaacaga aaccccaccg accgtcattc ccgcaaaagc
      721 gggaatccag caaccgaaaa accacaggaa tctatcagca aaaacagaaa ccccaccgcc
      781 gtcattcccg caaaagcggg aatccagacc cgtcggcacg gaaacttacc gaataaaaca
      841 gtttccttag attccacgtc ccagattccc gccttcgcgg gaatgacgag attttaagtt
      901 gggggaattt atcagaaaac ccccaacccc caaaaaccgg gcggatgccg caccatccgc
      961 ccccaaaccc cgatttaacc attcaaacaa accaaaagaa aaaacaaaat gaacaaaata
     1021 taccgcatca tttggaatag tgccctcaat gcctgggtcg tcgtatccga gctcacacgc
     1081 aaccacacca aacgcgcctc cgcaaccgtg gcgaccgccg tattggcgac actgttgttt
     1141 gcaacggttc aggcgaatgc taccgatgac gacgatttat atttagaacc cgtacaacgc
     1201 actgctgtcg tgttgagctt ccgttccgat aaagaaggca cgggagaaaa agaaggtaca
     1261 gaagattcaa attgggcagt atatttcgac gagaaaagag tactaaaagc cggagcaatc
     1321 accctcaaag ccggcgacaa cctgaaaatc aaacaaaaca ccaatgaaaa caccaatgac
     1381 agtagcttca cctactccct gaaaaaagac ctcacagatc tgaccagtgt tgaaactgaa
     1441 aaattatcgt ttggcgcaaa cggtaataaa gtcaacatca caagcgacac caaaggcttg
     1501 aattttgcga aagaaacggc tgggacgaac ggcgacccca cggttcatct gaacggtatc
     1561 ggttcgactt tgaccgatac gctgctgaat accggagcga ccacaaacgt aaccaacgac
     1621 aacgttaccg atgacgagaa aaaacgtgcg gcaagcgtta aagacgtatt aaacgcaggc
     1681 tggaacatta aaggcgttaa acccggtaca acagcttccg ataacgttga tttcgtccgc
     1741 acttacgaca cagtcgagtt cttgagcgca gatacgaaaa caacgactgt taatgtggaa
     1801 agcaaagaca acggcaagaa aaccgaagtt aaaatcggtg cgaagacttc tgttattaaa
     1861 gaaaaagacg gtaagttggt tactggtaaa ggcaaagacg agaatggttc ttctacagac
     1921 gaaggcgaag gcttagtgac tgcaaaagaa gtgattgatg cagtaaacaa ggctggttgg
     1981 agaatgaaaa caacaaccgc taatggtcaa acaggtcaag ctgacaagtt tgaaaccgtt
     2041 acatcaggca caaatgtaac ctttgctagt ggtaaaggta caactgcgac tgtaagtaaa
     2101 gatgatcaag gcaacatcac tgttaagtat gatgtaaatg tcggcgatgc cctaaacgtc
     2161 aatcagctgc aaaacagcgg ttggaatttg gattccaaag cggttgcagg ttcttcgggc
     2221 aaagtcatca gcggcaatgt ttcgccgagc aagggaaaga tggatgaaac cgtcaacatt
     2281 aatgccggca acaacatcga gattacccgc aacggtaaaa atatcgacat cgccacttcg
     2341 atggcgccgc agttttccag cgtttcgctc ggtgcggggg cggatgcgcc cactttgagc
     2401 gtggatgacg agggcgcgtt gaatgtcggc agcaaggata ccaacaaacc cgtccgcatt
     2461 accaatgtcg ccccgggcgt taaagagggg gatgttacaa acgtcgcaca acttaaaggc
     2521 gtggcgcaaa acttgaacaa ccgcatcgac aatgtggacg gcaacgcgcg tgcgggcatc
     2581 gcccaagcga ttgcaaccgc aggtctagtt caggcgtatc tgcccggcaa gagtatgatg
     2641 gcgatcggcg gcgacactta tcgcggcgaa gccggttacg ccatcggcta ctccagtatt
     2701 tccgacggcg gaaattggat tatcaaaggc acggcttccg gcaattcgcg cggccatttc
     2761 ggtgcttccg catctgtcgg ttatcagtgg taagggcttt ttcgcctgtc tgctgttggg
     2821 gcaggcggaa ggtttgaagg gaagggtggc gatttgccgc ctgagacctt tgcaaaatcc
     2881 cccaaaatcc cctaaattcc caccaagaca tttaggagat ttctcatgag caccttcttc
     2941 cagcaaaccg cccaagccat gattgccaaa cacatcgacc gtttcccgct attgaagttg
     3001 gaccaggtga ttgattggca gccgatcgaa caatacctga accgtcaaaa aacccg
//
LOCUS       DBBZXW010000152         2987 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.152, whole genome shotgun sequence.
ACCESSION   DBBZXW010000152 DBBZXW010000000
VERSION     DBBZXW010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.152"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(143..233)
                     /locus_tag="ACJJD2_002014"
     tRNA            complement(143..233)
                     /locus_tag="ACJJD2_002014"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(197..199),aa:Ser,seq:gga)
     gene            complement(272..358)
                     /locus_tag="ACJJD2_002015"
     tRNA            complement(272..358)
                     /locus_tag="ACJJD2_002015"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(322..324),aa:Leu,seq:cag)
     gene            complement(394..480)
                     /locus_tag="ACJJD2_002016"
     tRNA            complement(394..480)
                     /locus_tag="ACJJD2_002016"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(444..446),aa:Leu,seq:cag)
     gene            569..2944
                     /gene="rnr"
                     /locus_tag="ACJJD2_002017"
     CDS             569..2944
                     /gene="rnr"
                     /locus_tag="ACJJD2_002017"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HGG7580480.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIEALVRELSIKEEEYEFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSDGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
BASE COUNT          786 a          745 c          803 g          653 t
ORIGIN      
        1 taccacaaaa cataccataa aaaaacggta acggatagtt gtaagcggtt gatgacgatt
       61 atagacaata acgggttttc ccaatgaaat tattgtttga ataataaaaa atcccaaacc
      121 gtaaaagttt gggatttgta tttggcagag aggaagggat tcgaaccctc gatacgctat
      181 tcacgtatac acgctttcca ggcgtgcgac ttaaaccact catccacctc tctaatggcg
      241 gaaattatcc caatcgggat aatttattat ttggtgcccg ggagaagact cgaacttcca
      301 cacccgtgag gataccagca cctgaagctg gcgcgtctac caattccgcc acccgggcaa
      361 tctaaatatt gaaataaagc aaagcatttg atttggtgcc cgggagaaga ctcgaacttc
      421 cacacccgtg aggatactag cacctgaagc tagcgcgtct accaattccg ccacccgggc
      481 tttgctttat ttgctgtttt gcggtacagt gtcctgccgc aaagaagtcg ctattatata
      541 gttcataaag agaatgtcaa cagtccaaat gaataaaaat attaaatctt taaatttacg
      601 ggaaaaagac ccgtttttaa gtcgtgaaaa acagcgttat gaacatcctt tgcccagtcg
      661 ggaatggata atcgagctgc ttgaacgtaa aggcgtacca tccaagattg aagctttggt
      721 acgcgaattg tcgattaagg aagaagagta cgaatttttc gaacgtcgtc tgaaggcgat
      781 ggcgcgggac ggtcaggttt taatcaaccg tcggggcgcg gtttgcgcgg cggacaaatt
      841 ggatttggtc aaatgccgtg tcgaggcgca caaagacggc ttcggtttcg ccgtgccgct
      901 cacgcccgcc aaagacggtg attttgtttt gtacgaacgc cagatgcgcg gcattatgca
      961 cggcgatatt gtcactgttc gtcctgccgg catggaccgt aggggccgcc gcgaagggac
     1021 ggttctggat attgtcgaac gcgcgcaaag caaagttgtc ggccgtttct atatggatag
     1081 gggcgtggcg attttggagc cggaagacaa gcgtctgaac caaagcatcg tattggaacc
     1141 ggacggcgtg gcgcgtttca aacctgaatc cggtcaggtc atcgtcggcg aaattgaggt
     1201 ttatcctgag caaaaccggc cggcagtggc aaaaatcatc gaagttttgg gcgattatgc
     1261 cgacagcggc atggagattg aaattgccgt gcgcaagcat catttgccgc accaattcag
     1321 tgaagcgtgt gccaaagccg cgaaaaaaat tcccgaccat gtacgcaaaa gcgatttgaa
     1381 aggccgcgtc gatttgcgcg atttgccttt ggtaacgata gacggcgaaa cggcgcgcga
     1441 ttttgacgat gccgtgtttg ccgaaaaaat cggacgcaat taccgtctgg tcgtggcgat
     1501 tgccgatgtc agccattatg tccgccccga tgacgctatc gacacggacg ctcaggaacg
     1561 cagcaccagt gtttacttcc cgcgccgcgt gattcccatg ttgccggaaa acctgtccaa
     1621 cggcatctgc tcgctcaatc ctaatgtcga gcgtttgtgt atggtgtgcg atatggtcat
     1681 cacttacgcg ggcaatatta aagaataccg cttctacccc gccgtgatgc gctctcatgc
     1741 ccgcctgacc tacaaccaag tttggaaatg gctttcagac ggcatcgggc atccgttcaa
     1801 agcacaaatc gacacgcttt acaaactctt caaaatcctt cagaaaaagc gtttcgaacg
     1861 cggggcggtg gagtttgaca gcatcgaaac ccaaatgctt ttcgacgaca acggtaaaat
     1921 tgaaaaaatc gtccccgttg tccgcaacga tgcccacaag ctgattgaag aatgtatgtt
     1981 ggcggcaaac gtttgcgcag cggattttct gttgaaaaac aagcataccg cattgttccg
     2041 caaccatttg gggcccacgc ccgaaaaact cgccgccttg cgcgagcagc tcggtctgtt
     2101 ggggcttcaa cttggcggcg gcgacaaccc gtcgccgaaa gactatgccg cgcttgccgg
     2161 acagttcaaa ggcaggccgg atgccgaatt gctgcaagtc atgatgttgc gctccatgca
     2221 acaggcggtt tacgaaccgc attgcgacgg acactttggt cttgcctacg aagcatacgc
     2281 ccacttcacc tcgcccatcc gccgctatcc cgacctgacc gtacaccgcg ccatcaaagc
     2341 cgtgttgaat cagcaaacct acacgccaaa aaaaagctgg caggctttgg gcgtgcatac
     2401 ctcgttctgt gagcgccgtg ccgacgacgc cagccgcgac gtggaaaact ggctgaaaac
     2461 ctattatatg cgcgataagg tcggcgaagt attcgaaggt aaaatctccg gcatgaccag
     2521 ttttggtatc tttgtaacac tggacggcat ccacattgac ggcttggtgc atatcagcga
     2581 tttgggcgaa gactatttca acttccgccc cgaaatcatg gcaatcgaag gcgaacgcag
     2641 cggcatccgt ttcaacatgg gggacagggt tgccgtccgg gtcgcccgtg ccgatttgga
     2701 tgatggaaaa atcgattttg tcctgattgc cgaggggagc ggcagggggc ggaaagttaa
     2761 atcatccgcg tctgccaaac cggcagggac ggcggggaaa gggaaaccga aaaccgccgc
     2821 cgagaaaaaa acagcccgag gcggcaaagt aaggggaagg ggcgcgtctg ccgccgcaga
     2881 atcggggaaa aaggcaaaga aaccggttcc gattaaggta aaaaaacgga aaggcaaatc
     2941 ataatgctga cggggtggct tggggagggc ggggcatact ttcccga
//
LOCUS       DBBZXW010000153         2984 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.153, whole genome shotgun sequence.
ACCESSION   DBBZXW010000153 DBBZXW010000000
VERSION     DBBZXW010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.153"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1557
                     /locus_tag="ACJJD2_002018"
     CDS             <1..1557
                     /locus_tag="ACJJD2_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HGG7580481.1"
                     /translation="LAENQSRYDTWKEGGIGRSILHGAAGGLTTGSLGGILAGSGTSL
                     AAPYLDKAAENLGTAGKAAVNALGGAAIGYATGGSGGAVVGANVDWHNRQLHPSERDW
                     IRKNAQAFAKQEVGGREPTIDEIALAEKRLAQQAAKETDLFWMLTLEKVTDLSAQKFL
                     RQAKGTFTNENGTQQQFFTTQGKQFMRPELFANEVYDLSFYKNHLQSPKNSSISKGTG
                     ELARRVTSSTWDKAKQDPILTGLQIAASPVHLVRDVGKASWQCVSGFGQCLQQGKENF
                     VETGSAIGTGTASFQLNDLKPIYGQDVRGAQAGLVALQTADGITTALGAAKALNVAGK
                     GSRYFINEWASSPPSGSRAAQRGAVGNLTHSQQVLTDGSHIQRGGKLLPNIRYKAGEF
                     DYLYETDTLGRIKSFETDNLQLTQRDRLKHNSKTPDKVKGQDHAGHLIGDRFGGSPNL
                     DNLVSQHKDVNLSAYKVLENKWAEAIKSGKNVKIQMQIEYAAGTRHPTRFVGYYWIDG
                     KPTRININNL"
     gene            1572..2018
                     /locus_tag="ACJJD2_002019"
     CDS             1572..2018
                     /locus_tag="ACJJD2_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580482.1"
                     /translation="MIFEDYFSELQADMVSICLEYVQGKADKIYIYAAFEPRVSGAGC
                     FFSVKGKLVQRHLVNQEIPEVNLDHQIQVLDILMEDLEKLNSICQKFNQPMPTEIKMI
                     YDVKKNSLSANYQYNLILSSESGLLALPQDVEDAWFEEIKKQMEDN"
     gene            2174..2524
                     /locus_tag="ACJJD2_002020"
     CDS             2174..2524
                     /locus_tag="ACJJD2_002020"
                     /inference="COORDINATES: protein motif:HMM:NF045464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6883 domain-containing protein"
                     /protein_id="HGG7580483.1"
                     /translation="MPTLRLLIPNADSVIIDTRKFTDYALNPNHDVGRHKARVFESAL
                     GYNQSNATELILKIRQGLKDNPARLGKKDQYGQRYTVDIPITGPNGKTAIVTTGWILV
                     PGSEIPKMTTVLVK"
     gene            2534..2725
                     /locus_tag="ACJJD2_002021"
     CDS             2534..2725
                     /locus_tag="ACJJD2_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4926 domain-containing protein"
                     /protein_id="HGG7580484.1"
                     /translation="MNLNDVVKLKVKQPNSNVPEGSIGTIIEVLQELPSAVFEVEFIN
                     KNGELIDTLTLAECDIEPA"
BASE COUNT         1019 a          502 c          674 g          789 t
ORIGIN      
        1 cttgccgaaa accaaagccg ctacgacacc tggaaagaag gcggcatagg caggagcata
       61 ctgcacgggg cggcaggcgg actgacgacc ggaagcctcg gcggcatact ggccggcagc
      121 ggcacttccc ttgctgcacc gtatttggac aaagcggcgg aaaacctcgg tacggcgggc
      181 aaagcggcgg tcaacgcact gggcggggcg gcaatcggct atgcaactgg tggtagtggt
      241 ggtgctgtgg tgggtgcgaa tgtagattgg cataatcggc agttgcatcc gagtgaaaga
      301 gattggataa gaaaaaatgc acaagctttt gcgaaacagg aggtaggtgg tagagaaccc
      361 actatagatg aaattgcatt agcagaaaaa cgactagcac aacaggcggc taaagagaca
      421 gatttgtttt ggatgctaac attagaaaaa gtaacagatt tatcagctca aaaattccta
      481 agacaagcaa aaggaacttt tacaaatgaa aatggtacgc agcaacaatt ttttactacg
      541 caagggaagc aatttatgcg tcctgaattg tttgctaatg aagtatatga tctgtctttt
      601 tacaaaaacc atttacaatc tcctaaaaat agtagtatca gcaagggtac aggagaattg
      661 gctcgaagag ttacttcatc tacttgggat aaagcaaaac aagatcctat tttgacagga
      721 ttgcaaatag ctgcctcccc tgtacattta gttcgggatg taggtaaggc aagctggcag
      781 tgcgtaagcg gctttggaca atgtttgcaa caaggaaaag agaattttgt agaaacaggt
      841 tctgcaattg gaacaggaac tgcctctttt caactaaacg accttaagcc gatttatggt
      901 caagatgtac gtggtgcaca agcaggattg gttgcactac aaacggcaga tggaataact
      961 acggcattgg gtgcagcaaa agcattaaat gttgcaggaa aaggtagtcg ctattttata
     1021 aatgaatggg ctagtagtcc gcctagtggt tctcgtgctg cacagcgtgg ggcagtgggg
     1081 aatttaaccc attcgcaaca agttttgaca gatggttcac atattcaacg tggcggaaaa
     1141 cttttaccta atattcgcta taaagcaggc gagtttgatt atttatatga aactgatact
     1201 ttaggtagaa ttaaaagttt tgaaacagat aatttgcaat taacacagag agatagatta
     1261 aagcataatt caaaaactcc tgataaagtc aaggggcaag accatgcagg acatttaatt
     1321 ggagatagat ttggaggttc gcccaattta gataatttag tgtcacagca caaagatgta
     1381 aacttaagtg cgtataaagt tttggagaat aaatgggcgg aagcaattaa atcaggaaaa
     1441 aatgttaaaa tccaaatgca aattgaatat gcagcaggta caagacaccc tacacgattt
     1501 gttggatatt attggattga tggtaaacca actagaatta atattaataa tttatgaaac
     1561 aaggattttt tatgattttt gaagattatt ttagtgaatt acaagcagat atggtttcta
     1621 tttgtttgga atatgttcaa ggtaaggctg ataaaattta catttatgca gcttttgagc
     1681 ctcgtgttag tggtgctgga tgttttttct ctgttaaagg aaaacttgta caacgacatc
     1741 ttgttaatca agaaattcca gaagttaatc ttgaccatca aattcaagta ttagacatac
     1801 ttatggaaga tttagaaaaa ctaaattcta tttgtcagaa atttaaccaa cctatgccaa
     1861 ctgaaattaa aatgatttat gatgtaaaaa agaatagctt atcagcaaat tatcaatata
     1921 atttaatctt gtcatctgaa tctggattac ttgctttacc gcaagatgtt gaagatgcat
     1981 ggtttgaaga aattaagaag caaatggaag ataattaatt cacagcaagc gtagcaagcg
     2041 tagggtgggc aactcgttgc ccacgcagtt caatcgtata tgttaaaatg atgttttaat
     2101 gtgaaatatt tcatttcagg ctgcctgaaa aaataaaata acgtggcgtg tatcaaaccg
     2161 cgtgggcaac gagttgccca ccctacgctt gctaatccct aacgctgatt ctgtcataat
     2221 cgataccaga aaatttacag attatgcatt gaatcctaat catgatgttg ggagacataa
     2281 agctagagtt tttgaatcag ctctaggata taatcaatct aatgcaactg agctaatttt
     2341 gaaaattaga caaggattaa aagataaccc tgcaagatta ggaaaaaaag atcaatatgg
     2401 gcaaagatat acagtagata ttcctattac tggacctaat gggaaaacag ccattgtaac
     2461 tacaggctgg attttagtgc ctggatctga aattcccaaa atgacaaccg ttttagtaaa
     2521 ataggtgcca ataatgaatt taaatgatgt tgtaaagctt aaagtaaaac agcccaatag
     2581 taatgtacct gaaggtagta taggtacaat aatcgaagtt cttcaggaat tgccatctgc
     2641 tgtttttgaa gtggaattta taaataaaaa tggcgaacta atcgatacat taacgctagc
     2701 agaatgtgac atagagccag cgtaacctgt gcaattaatg cgaactgtta catggtaggg
     2761 tgggcaactc gttgcccacg cagttcagtc tcatgtgcta aaactatgtt ttaaggcgaa
     2821 agttttggat tgggcgcaag tgcgtccata agcggcaaaa cactgggaca gggcgcaaaa
     2881 aataaacctc aaaacaaaca cctgacaagc gtagccgata aaaacggcgc aagttcatca
     2941 gtgggttatg gcagcgacca agacagtcaa agcagcatca cgaa
//
LOCUS       DBBZXW010000154         2979 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.154, whole genome shotgun sequence.
ACCESSION   DBBZXW010000154 DBBZXW010000000
VERSION     DBBZXW010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.154"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            113..2878
                     /gene="tdfH"
                     /locus_tag="ACJJD2_002022"
     CDS             113..2878
                     /gene="tdfH"
                     /locus_tag="ACJJD2_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HGG7580485.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQDGQLKFNSDSGKWER
                     DLQRQQWKYPWYKKYENPQELQKYIEEHDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYREHCNQSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGNIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADGLCNGKYGGTSKSVLTNFARGRTFL
                     ITMSYKF"
BASE COUNT          846 a          750 c          726 g          657 t
ORIGIN      
        1 ccaattgaaa tcttcagacg gtatatcgaa tttacacttt ttaatgttta tgccgcctaa
       61 aaaaatgcta atatatttct taattgtctg actgtttatt gttgaggaaa atatgagatc
      121 ttctttccgg ttgaagccga tttgttttta tcttatgggt gttatgctat atcatcatag
      181 ttatgccgaa gatgcagggc gcgcgggcag cgaggcgcag atacaggttt tggaagatgt
      241 gcacgtcaag gcgaagcgcg taccgaaaga caaaaaagtg tttaccgatg cgcgtgccgt
      301 atcgacccgt caggatatat tcaaatccag cgaaaacctc gacaacatcg tacgcagcat
      361 acccggtgcg tttacacagc aagataaaag ctcgggcatt gtgtctttga atattcgcgg
      421 cgacagcggg ttcgggcggg tcaatacgat ggtggacggc atcacgcaga ccttttattc
      481 gacttctacc gatgcgggca gggcaggcgg ttcatctcaa ttcggtgcat ctgtcgacag
      541 caattttatt gccggactgg atgtcgtcaa aggcagcttc agcggctcgg caggcatcaa
      601 cagccttgcc ggttcggcga atctgcggac tttaggcgtg gatgacgtcg ttcagggcaa
      661 taatacctac ggcctgctgc taaaaggtct gaccggcacc aattcaacca aaggtaatgc
      721 gatggcggcg ataggtgcgc gcaaatggct ggaaagcgga gcatctgtcg gtgtgcttta
      781 cgggcacagc aggcgcagcg tggcgcaaaa ttaccgcgtg ggcggcggcg ggcagcacat
      841 cggaaatttt ggcgcggaat atctggaacg gcgcaagcaa cgatattttg tacaagacgg
      901 ccagttgaaa ttcaattccg acagcggaaa atgggagcgg gacttgcaaa gacaacagtg
      961 gaaatacccg tggtataaaa aatacgaaaa cccccaagaa ctgcaaaaat acatcgaaga
     1021 gcatgacaaa agctggcggg aaaacctggc gccgcaatac gacatcaccc ccatcgatcc
     1081 gtccagcctg aagcagcagt cggcaggtaa tctgtttaaa ttggaatacg acggcgtatt
     1141 caataaatac acggcgcaat ttcgcgattt aaacaccaaa atcggcagcc gcaaaatcat
     1201 caaccgcaat tatcaattca attacggttt atctttaaac tcatatgcca acctcaatct
     1261 gaccgcagcc tacaattcgg gcaggcagaa atatccgaaa gggtcgaagt ttacaggctg
     1321 ggggctttta aaagattttg aaacctacaa caacgcgaaa atcctcgacc tcaacaacac
     1381 cgccaccttc cggctgcccc gcgaaaccga gttgcaaacc actttgggct tcaattattt
     1441 ccacaacgaa tacggcaaaa accgctttcc tgaagaattg gggctgtttt tcgacggtcc
     1501 ggatcaggac aacgggcttt attcctattt ggggcggttt aagggcgata aagggctgct
     1561 gccccaaaaa tcaaccatcg tccaaccggc cggcagccaa tatttcaaca cgttctactt
     1621 cgatgccgcg ctcaaaaaag acatttaccg cttaaactac agcaccaata ccgtcggcta
     1681 ccgtttcggc ggcgaatata cgggctatta cggctcggat gacgaattta agcgggcatt
     1741 cggagaaaac tcgccgacat acagggaaca ttgcaaccag agctgcggaa tttatgaacc
     1801 cgtattgaaa aaatacggca aaaagcgcgc caacaaccat tcggtcagca ttagtgcgga
     1861 cttcggcgat tatttcatgc cgttcgccag ctattcgcgc acacaccgta tgcccaacat
     1921 ccaagaaatg tatttttccc aaatcggcga ctccggcgtt cacaccgcct taaaaccaga
     1981 gcgcgcaaac acttggcaat ttggcttcaa tacctataaa aaaggattgt taaaacaaga
     2041 tgatacatta ggattaaaac tggtcggcta ccgcagccgc atcgacaact acatccacaa
     2101 cgtttacggg aaatggtggg atttgaacgg gaatattccg agctgggtca gcagcaccgg
     2161 gcttgcctac accatccaac accgcaattt caaagacaaa gtacacaaac acggttttga
     2221 gttggagctg aattacgatt atgggcgttt tttcaccaac ctttcttacg cctatcaaaa
     2281 aagcacgcaa ccgaccaact tcagcgatgc gagcgaatcg cccaacaatg cgtccaaaga
     2341 agaccaactc aaacaaggtt atgggttgag cagggtttcc gccctgccgc gagattacgg
     2401 acgtttggaa gtcggtacgc gctggttggg caacaaactg actttgggcg gcgcgatgcg
     2461 ctatttcggc aagagcatcc gcgcgacggc tgaagaacgc tatatcgacg gcaccaacgg
     2521 gggaaatacc agcaatgtcc ggcaactggg caagcgttcc atcaaacaaa ccgaaaccct
     2581 tgcccgccag cctttgattt ttgattttta cgccgcttac gagccgaaga aaaaccttat
     2641 tttccgcgcc gaagtcaaaa atctgttcga caggcgttat atcgatccgc tcgatgcggg
     2701 caatgatgcg gcaacgcagc gttattacag ctcgttcgac ccgaaagaca aggacgaaga
     2761 cgtaacgtgt aatgctgatg gcttgtgcaa cggcaaatac ggcggcacaa gcaaaagcgt
     2821 attgaccaat tttgcacgcg gacgcacctt tttgataacg atgagctaca agttttaaag
     2881 gcagcccgcg ttttgtggaa aaccgcaatg ccgtctgaaa gcccttcaga cggcatttgt
     2941 ttccccaaac gcatcatcct gccgcaagcc tatgccaat
//
LOCUS       DBBZXW010000155         2954 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.155, whole genome shotgun sequence.
ACCESSION   DBBZXW010000155 DBBZXW010000000
VERSION     DBBZXW010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.155"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>2954
                     /locus_tag="ACJJD2_002023"
     CDS             <1..>2954
                     /locus_tag="ACJJD2_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7580486.1"
                     /translation="IDANGRLVNSGTMAAANAKDTDNTAEHKVNIRSQGVENSGTAVS
                     QQGTQIHSQSIQNTGTLLSSGEILIHNSGSLKNETSGTIEAARLAIDTDTLNNQGKLS
                     QTGSQKLHIDAQGKMDNRGRMGLQDTAPTASNGSSNQTGNSYNASFHSSTTTPTTATG
                     TGTATVSISNITAPTFADGTIRTHGALDNSGSIIANGQTDVSAQQGLNNAGQIDIHQL
                     NAKGSAFDNHNGTIISDAVHIQAGSLNNQNGNITTRQQLEIETDQLDNAHGKLLSAEI
                     ADLAVSGSLNNQNGEIATNQQLIIHDGQQSTAVIDNTNGTIQSGRDVAIQAKSLSNNG
                     TLAADNKLDIALQDDFYVERNIVAGNELSLSTRGSLKNSHTLQAGKRIRIKANNLDNA
                     AQGNIQSGGATDIGTQHNLTNRGLIDGQQTKIQAGQMNNIGTGRIYGDNIAIAATRLD
                     NQDENGTGAAIAARENLNLGIGQLNNRENSLIYSGNDMAVGGALDTNGQATGKAQRIH
                     NAGATIEAAGKMRLGVEKLHNTNEHLKTQLVETGREHIVDYEAFGRHELLREGTQHEL
                     GWSVYNDESDHLRTPDGAAHENWHKYDYEKVTQKTQVTQTAPAKIISGNDLTIDGKEV
                     FNTDSQIIAGGNLLVQTEKDGLHNEQTFGEKKVFSENGKLHSYWREKHKGRDSTGHSE
                     QNYTLPEEITRNISLGSFAYESHRKALSHHAPSQGTELPQSNGISLPYTSNSFTPLPS
                     SSLYIINPVNKGYLVETDPRFANYRQWLGSDYMLDSLKLDPNNLHKRLGDGYYEQRLI
                     NEQIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIALSAEQVAQLTSDIV
                     WLVQKEVKLPDGGTQTVLVPQVYVRVKNGDIDGKGALLSGSNTQINVSGSLKNSGTIA
                     GRNALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGILSVEQTLLLNAGNNINSQST
                     AASSQNTQGSST"
BASE COUNT          985 a          679 c          644 g          646 t
ORIGIN      
        1 attgatgcaa atggccgttt agtcaatagt ggcacgatgg ctgccgccaa tgcgaaagat
       61 acggataata cagcggaaca caaagtcaat atccgcagtc agggcgttga aaacagcggt
      121 acggcggtat cgcaacaagg cactcaaatt cacagtcagt cgattcaaaa cactggcaca
      181 ttattgtcct caggcgaaat attgattcac aattcgggca gcctgaaaaa tgaaacatca
      241 ggcaccattg aagccgctcg tttggctatt gataccgaca cacttaataa tcaaggcaaa
      301 ctctctcaaa caggttcaca aaaactccat attgatgcac aaggcaaaat ggataaccgt
      361 ggccgcatgg gtttacaaga taccgcacca accgcgtcaa atggttcaag caatcaaacc
      421 ggcaatagtt acaatgcatc tttccattca tccactacca caccaacaac ggcaacaggt
      481 acgggtactg caaccgtttc tatatcaaac ataactgcgc ctacctttgc tgatgggaca
      541 attcgcactc atggtgcact ggataattca ggcagtatta ttgccaatgg tcaaacagat
      601 gttagtgcgc aacaaggttt aaataatgca ggacaaatag acattcatca gttaaatgca
      661 aaaggttcgg cgtttgacaa tcacaatgga acaattatca gtgatgcggt ccacattcaa
      721 gccggcagcc tgaataatca aaatggcaac atcacaacac gccaacagtt agagattgaa
      781 accgatcaac tggataacgc tcatggcaag ttattatcag cagaaatagc ggatttagcc
      841 gtttcaggca gcctgaacaa tcaaaatggc gaaatagcga ccaatcaaca actgattatt
      901 cacgatggtc agcaatctac cgctgtcatt gataatacga atggcacgat acaatcaggc
      961 cgtgatgttg ctattcaggc aaaatcgtta tccaacaacg gcacacttgc cgctgataat
     1021 aaactggata ttgcgttaca agatgatttt tatgtagaac gcaatatcgt ggcgggcaat
     1081 gaattgtcgc tcagtacacg aggcagcctg aaaaattcac atactttgca agcaggaaaa
     1141 cgcattcgga ttaaagcaaa taaccttgat aatgcagcac aaggcaacat tcaatccggc
     1201 ggtgcaacag acattggcac gcagcacaat ttaaccaata gaggcttgat tgacggacaa
     1261 caaaccaaaa tccaagccgg gcaaatgaat aatatcggta caggtcggat ttatggcgac
     1321 aatatcgcta ttgcggctac ccgcttagac aatcaagatg aaaacggtac aggtgccgcc
     1381 attgcggcac gtgaaaacct gaatttaggc atcggacaat taaacaaccg tgaaaacagt
     1441 ctgatttaca gcggtaacga tatggcggtt ggcggcgcat tagataccaa tggccaagcc
     1501 acaggcaaag cccaaaggat acacaatgcc ggcgcaacca ttgaagccgc cggcaaaatg
     1561 cgtttaggcg tagaaaagct gcacaatacc aatgagcatt tgaaaacgca gttggtagaa
     1621 acagggcgcg agcatattgt tgattacgaa gcatttggac gacacgaatt attgcgggaa
     1681 ggcacacaac atgaattagg ctggtctgtc tataacgatg aatcagacca cttacgcacc
     1741 cctgatggag cggcgcatga aaattggcat aaatacgatt atgaaaaagt cacccaaaaa
     1801 acccaagtta cccaaactgc gccagccaaa atcatttcag gtaatgattt aaccattgat
     1861 ggtaaagaag tatttaatac cgatagccaa atcatcgccg gcggcaattt gcttgtgcaa
     1921 acagaaaaag acggtttgca taacgagcaa acctttggcg aaaagaaagt attcagtgaa
     1981 aatggcaaat tacacagcta ttggcgtgag aaacataaag gacgagactc aacgggacat
     2041 agcgaacaaa attacacttt gccggaggaa atcacacgca acatttcact gggttcattt
     2101 gcctatgaat cgcatcgcaa agcattaagc catcatgcgc ccagccaagg cactgagttg
     2161 ccgcaaagca acggtatttc gctaccctat acgtccaatt cttttacccc attacccagc
     2221 agcagcttat atattatcaa tcctgtcaat aaaggctatc ttgttgaaac cgatccacgc
     2281 tttgccaact accgtcaatg gttgggtagt gactatatgc tggacagcct caaactagac
     2341 ccaaacaatt tacataaacg tttgggtgat ggttattacg agcaacgttt aatcaatgaa
     2401 cagatcgcag agctgacagg gcatcgtcgt ttagacggtt atcaaaacga cgaagaacaa
     2461 tttaaagcct taatggataa tggcgcgact gcggcacgct ccatgaatct cagcgttggc
     2521 attgcattaa gtgccgagca agtagcgcaa ctgaccagcg atattgtttg gttggtacaa
     2581 aaagaagtta aacttcctga tggcggcaca caaaccgtat tggtgccaca ggtttatgta
     2641 cgcgttaaga atggcgacat agacggtaaa ggtgcattgt tgtcaggcag caatacacaa
     2701 atcaatgttt caggcagcct gaaaaactca ggcacgattg cagggcgcaa tgcgcttatt
     2761 atcaataccg atacgctaga caatatcggt gggcgtattc atgcgcaaaa atcagcggtt
     2821 acggccacac aagacatcaa taatattggc ggcattcttt ctgtcgaaca gacattattg
     2881 ctcaacgcag gcaacaacat caacagccaa agcaccgccg ccagcagtca aaatacacaa
     2941 ggcagcagca ccta
//
LOCUS       DBBZXW010000156         2883 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.156, whole genome shotgun sequence.
ACCESSION   DBBZXW010000156 DBBZXW010000000
VERSION     DBBZXW010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.156"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(414..1184)
                     /gene="xth"
                     /locus_tag="ACJJD2_002024"
     CDS             complement(414..1184)
                     /gene="xth"
                     /locus_tag="ACJJD2_002024"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG7580487.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(1244..1525)
                     /locus_tag="ACJJD2_002025"
                     /pseudo
     CDS             complement(1244..1525)
                     /locus_tag="ACJJD2_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR/SmtB family transcription factor"
     gene            complement(1664..1903)
                     /locus_tag="ACJJD2_002026"
     CDS             complement(1664..1903)
                     /locus_tag="ACJJD2_002026"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580488.1"
                     /translation="MSDKEPPNRNPVIASRRKCRLKYSSDGIFREGRDALEKTAFQAG
                     ILFARQRGGIGRAGERTGAAVLCCLKARLYACLQK"
     gene            complement(1931..2812)
                     /gene="nadC"
                     /locus_tag="ACJJD2_002027"
     CDS             complement(1931..2812)
                     /gene="nadC"
                     /locus_tag="ACJJD2_002027"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HGG7580489.1"
                     /translation="MPSENTLFPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPEKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
BASE COUNT          652 a          737 c          772 g          722 t
ORIGIN      
        1 ttgcctttgg gagaatcaat tctgacagca cataacatag gttcatcttt acagtcgtta
       61 tattgggttt catcaaactc aactgcatag cacaataaag gcaataggaa aaaaaggaga
      121 ttaatttatt actatacata aggcagcctg actattcatt ctaaaataaa tccggttttt
      181 aatatttgat tctgctccgg attatataca taataaattt tactgctcca aaatctgata
      241 ttaaccctat ggatttcata aatttttcag aaaaataggc tgtgcttgaa caatccgccg
      301 actccggctg tttgtcaggg aaaaggcaat tattttcggt tagtcagcag cctatcctat
      361 tgaatcactt aaagatatgg atgtttgtca acgccatatc aaaacacggt cttttaccaa
      421 tcgaattctg ccgtcaccgg cgcgtggtcg ctcggacgct ccagcgcgcg cgtctccaaa
      481 tcaacgcgga catccttcaa cgccgccgcc atcgcaggcg acaccaaaat atggtcgata
      541 cgcaggccca gtttgcgttg gaacatcgcg ccgcgatagt cgaaccaggt atagaacgcg
      601 ccttcgggat ggacttggcg caggctgtcg gtcagtccca aatccagcag gtttttgaac
      661 cactgccgtt cgacggacga acagtggatt ttttcgtgcc atttttcagg gtcgtaacag
      721 tccgcatcgg caggcgcgat attgaaatcg cccagtagca ccagtttgcc gtagcgggtc
      781 atttcatcgc ggacaaattc ggttaacgcg gcaaaccatt gttctttata tttgaatttc
      841 gggctgtcga gggcttcgcc gttgacgcaa tagacattga tgacgcgcac accgccgacg
      901 gttgccgcaa tcacgcgccg ttgcggatcg tccggcagcg cgggcagccc gatatgcacg
      961 tcttccggcg cgttgcggct gacgattgcc acgccgttgt aggttttctg cccgctccaa
     1021 acacagtgcc agcccatcat ttgcaaagcg gcggccggaa atttgtcctg atcgagtttg
     1081 agttcctgca aaaccaaaat atcgggcgga ttgtcggcaa gcaggttttg cacctgcggc
     1141 agccgcacat tgagcgaatt gacgttccaa gtggtgattt tcataacatt tccgaaaaat
     1201 gccgtctgaa acgttcagac ggcaaaagga aaggatttta acactatacc gcgcgtttgt
     1261 tttccaaatc gcggattgtc cgcagaatcg ttgccgcgtc ttcggaaatc aggcggtatt
     1321 cgataatgcg gtgctaacgc gtaaagtcca ccagaccttc cacgcgcagt cggctcaaat
     1381 ggttggaaac cgctgtcgca ggcatggaca gggattcgga cagctcggca atattgcaat
     1441 cgccgtccaa cagttggagc agtatcgcca tacgttcggg atgcgccata agtttgagta
     1501 tggtgtggag cggtattgtg ttcatcggta ttcctaaaac cttttccgcc cgccaagcgg
     1561 attgacgggc ggcagatatg gatgattgtg attatcttta taaattatat tataaatcaa
     1621 ttatttatat atgattgtac aggattgtat gttcctttta ccactatttt tgcaaacacg
     1681 cgtaaaggcg ggctttcaga cagcataaaa ctgccgcgcc cgtcctttcc cctgccctgc
     1741 cgatgcctcc gcgctgtcgg gcaaacaaaa tacctgcctg aaacgctgtt ttttctaaag
     1801 catcacgacc ttcacgaaaa atgccgtctg aagaatattt cagacggcat ttcctccttg
     1861 aggcaataac cggattacgg ttaggcggtt ccttgtctga catatcagac aactgccgac
     1921 accctaaaac tcatgccaag aaatccaaac ctatgtccaa cgaacggctg ctgtgggtca
     1981 gatagccgag agcgatgccg tccacgccgg tttgcgccac gcgcttcagt cggtcgaagc
     2041 cgatgccgcc cgatgcttcg caatagacgg tgtgggggtg ggcggtttgc gtgtggcagc
     2101 ggtttgccgc ttctttcagg gtttcgtcgt ccatgttgtc cagcaaaatc cgttccgcgc
     2161 ccgctgcgat ggcttcgtcc agttgtgcca acgtgtccac ttcgatttct acacaagtca
     2221 acggtccgac cgcctgtttt gcctgccgaa cggcttgggc gatgctgccg caataggcga
     2281 ggtggttgtc tttgatgagc acggcgtcgt ccaagcccat gcggtggttc acgccgccgc
     2341 ctgccctgac ggcgtatttt tgcaggacgc gcagcagggg gatggttttg cggctgcaca
     2401 cgatgtctgt accgtattcg gcgacttcgg caacggcacg cgcggtggcg gtggcgatgc
     2461 cgcttaagtg cgtgaggtag ttgagcgcgg tgcgttcggc ggcgagcagc gcgcgggcgt
     2521 tgccttcgac ggcggcaagc gtctgacctg cgcggacgac ttgcccgtct cggatttcgg
     2581 cttggaagcg aacggacgga tccatcgtct gaaaggcgag gcgcgccaag tccatgccgg
     2641 cgataacgcc gtcttcgcgg ctgacgagga agagtttggc ggttttttcg ggggcgataa
     2701 cggcggcgga cgtaatatcg ccgcgcctgc ccaaatcttc gctcaaggct tgttccacca
     2761 tggggcgcaa cagggtgtcg ggcaggggga agagggtgtt ttcagacggc atggtgtttc
     2821 ctttgttgaa aaagattgat attgcccgat ggggcaaaac ttcattttat agtggattaa
     2881 ctt
//
LOCUS       DBBZXW010000157         2798 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.157, whole genome shotgun sequence.
ACCESSION   DBBZXW010000157 DBBZXW010000000
VERSION     DBBZXW010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.157"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            103..2253
                     /gene="yccS"
                     /locus_tag="ACJJD2_002028"
     CDS             103..2253
                     /gene="yccS"
                     /locus_tag="ACJJD2_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HGG7580490.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLYDGNDSPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT          692 a         1034 c          553 g          519 t
ORIGIN      
        1 agcaccttag agaatcgttc tctttcagct aaggcgaggc aacgccgtac tggtttttgt
       61 taatccacta tattcacttc ataacaataa accggtaaaa ccatgaaaac cccactcctc
      121 aagcctctgc tcattacctc gcttcccgtt ttcgccagtg tttttaccgc cgcctccatc
      181 gtctggcagc taggcgaacc caagctcgcc atgcccttcg tactcggcat catcgccggc
      241 ggccttgtcg atttggacaa ccgcctgacc ggacggctga aaaacatcat cgccaccgtc
      301 gccctgttta ccctctcctc gctcacggca caaagcaccc tcggcacagg gctgcccttc
      361 atcctcgcca tgaccctgat gaccttcggc tttaccattt taggcgcggt cgggctgaaa
      421 taccgcacct tcgccttcgg cgcactcgcc gtcgccacct acaccacact tacctacacc
      481 cccgaaacct actggctgac caaccccttc atgattttat gcggcaccgt actgtacagc
      541 accgccatca tcctgttcca aatcatcctg ccccaccgcc ccgtccaaga aagcgtcgcc
      601 aacgcctacg acgcactcgg cggctacctc gaagccaaag ccgacttctt cgaccccgat
      661 gaggcagcct ggataggcaa ccgccacatc gacctcgcca tgagcaacac cggcgtcatc
      721 accgccttca accaatgccg ttccgccctg ttttaccgtt tgcgcggcaa acaccgccac
      781 ccgcgcaccg ccaaaatgct gcgctactac ttcgccgccc aagacatcca cgaacgcatc
      841 agctccgccc acgtcgacta ccaagagatg tccgaaaaat tcaaaaacac cgacatcatc
      901 ttccgcatcc accgcctgct cgaaatgcag ggacaagcct gccgcaatac cgcccaagcc
      961 ctgcgcgcaa gcaaagacta cgtttacagc aaacgcctcg gccgcgccat cgaaggctgc
     1021 cgccaatcgc tgcgtctcct ttacgacggc aacgacagcc ccgacatccg ccacctgcgc
     1081 cgtcttctcg acaacctcgg cagcgtcgac caacaattcc gccaactcca gcacaacggc
     1141 ctgcaggcag aaaacgaccg catgggcgac acccgcatcg ccgccctcga aaccggcagc
     1201 ctcaaaaaca cctggcaggc aatccgtccg cagctaaacc tcgaatcagg cgtattccgc
     1261 catgccgtcc gcctgtccct tgtcgttgcc gccgcctgca ccatcgtcga agccctcaac
     1321 ctcaacctcg gctactggat actactgacc gcccttttcg tctgccaacc caactacacc
     1381 gccaccaaaa gccgcgtccg ccagcgcatc gccggcaccg tactcggcgt aatcgtcggc
     1441 tcgctcgtcc cctacttcac cccgtctgtc gaaaccaaac tctggattgt catcgccagt
     1501 accaccctct ttttcatgac ccgcacctac aaatacagtt tctccacctt cttcattacc
     1561 attcaagccc tgaccagcct ctccctcgca ggtttggacg tatacgccgc catgcccgta
     1621 cgcatcatcg acaccattat cggcgcatcc cttgcctggg cggcagtcag ctacctgtgg
     1681 ccagactgga aatacctcac gctcgaacgc accgccgccc ttgccgtatg cagcaacggt
     1741 gcctatctcg aaaaaatcac cgaacgcctc aaaagcggcg aaaccggcga cgacgtcgaa
     1801 taccgcgcca cccgccgccg cgcccacgaa cacaccgccg ccctcagcag caccctttcc
     1861 gacatgagca gcgaacccgc aaaattcgcc gacagcctgc aacccggctt taccctgctc
     1921 aaaaccggct acgccctgac cggctacatc tccgccctcg gcgcataccg cagcgaaatg
     1981 cacgaagaat gcagccccga ctttaccgca cagttccacc tcgccgccga acacaccgcc
     2041 cacatcttcc aacacctgcc cgaaaccgaa cccgacgact ttcagacggc attggataca
     2101 ctgcgtggcg aactcgacac cctccgcacc cacagtagcg gaacacaaag ccacatcctc
     2161 ctccaacagc tccaactcat cgcccgacag ctcgaaccct actaccgcgc ctaccgccaa
     2221 attccgcaca ggcagcccca aaacgccgcc tgaaaaagtt tcggcatttt gtaagagaga
     2281 gcagattgtc agacaggttg caagatagtg gataaagctt tgcgcagggt aaatgcgtag
     2341 caactgaacc gtcattccca cgaatctaca ttccgtcatt cccacgaaaa cagaaaacca
     2401 aaaacagaaa cctaaaatcc cgtcattccc acgaacctac attccgtcat tcccacgaaa
     2461 acagaaaacc aaaaacagaa acctaaaatc ccgtcattcc cacgaacctg catcccgtca
     2521 ttcccacgaa agtgggaatc cagaatctct aaagcttcag ctaacctttg aatattactg
     2581 ttatcccaag gtctagattc ccgcctgcac gggaatgacg gcatcggttt gacggtattt
     2641 aattgaattg tggaaattga tggattcagt gagattggcg agatgaagcc taccctatag
     2701 cccgcctttt acaaacccgc ccctcccgaa aaacgcaaaa aatgccgtcc gaaaaccttt
     2761 cggacggcat tttcgcgtgc aaatcagaag aagacttc
//
LOCUS       DBBZXW010000158         2781 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.158, whole genome shotgun sequence.
ACCESSION   DBBZXW010000158 DBBZXW010000000
VERSION     DBBZXW010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.158"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..140
                     /locus_tag="ACJJD2_002029"
                     /pseudo
     CDS             1..140
                     /locus_tag="ACJJD2_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family metal-binding protein"
     gene            210..593
                     /locus_tag="ACJJD2_002030"
     CDS             210..593
                     /locus_tag="ACJJD2_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HGG7580491.1"
                     /translation="MYCLRLRRLVLIFVNPLYIIATTVPAQQTFLDAAELMQWSRETE
                     WLGLNVIAHRNFGKQHAQVEFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPA
                     MKQPCICGSGKKFKACCGKYLKPVA"
     gene            complement(884..1678)
                     /locus_tag="ACJJD2_002031"
     CDS             complement(884..1678)
                     /locus_tag="ACJJD2_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG7580492.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDSPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
     gene            1887..2612
                     /locus_tag="ACJJD2_002032"
     CDS             1887..2612
                     /locus_tag="ACJJD2_002032"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HGG7580493.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAAQLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRQPSGAIVFMVGPEGGWTEQEEQQAFDAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          733 a          874 c          610 g          564 t
ORIGIN      
        1 gctatgccgg ctgctgccgc ccacttcatc tgcgccaaat cctgccgccc accgccgaag
       61 ccctcatgcg ttcgcggtac agcgcgtatg tgctgcacct tatcgactat agtggattaa
      121 caaaaaccag tacagcgttg cctcgcctta gctcaaagag aacgattctc taaggtgctg
      181 aagcaccgag tgaatcggtt ccgtactatt tgtactgtct tcggcttcgt cgccttgtcc
      241 tgatttttgt taatccacta tacatcatcg ctactaccgt tccggcacaa caaacattcc
      301 tcgatgccgc cgaactgatg cagtggagca gagaaaccga atggctgggc ttgaatgtca
      361 tcgcacaccg caacttcggc aaacagcacg cccaagtcga atttgaagcc tacttccgag
      421 acggacaaca ccgatctgcg catcacgaac tgtccggctt cgtcaacatc ggcggacaat
      481 ggtattttat cgatcccacc gttccgcatc ctgcgatgaa acaaccctgc atttgcggat
      541 cgggcaaaaa attcaaagcc tgctgcggca aatatctgaa acctgtcgca taaaaatgcc
      601 gtctgaacgt tcagacggca tttttaacgc gcaaaaaaaa ccattcatac caagggtaag
      661 tatgaatggt caatacattg cgggaaaacg tcttacttgc tgcactgccg aaaagggaga
      721 aacggcagcg gtaatcagcg gaaaggattg tacccgtata aatgttaagt aacgttaatt
      781 atgaaaatat aaccgatgtt tcggcacaca atccgcaact gtccggcgca ggcggcggca
      841 aagcctgttt attcaaaccc ttattcctgc ccatctgtcc accttactgg ttttcccgta
      901 tccacccgac ccagcgttca aacagcttcg gttcgagcgc ggcaacgacc gagcgtttga
      961 acacgtgttc accactccaa aacccgtcgc cttccaaagt cgtcagcctg ccgcccgcct
     1021 cctcgaaaat caacgcaccc gcagcatagt cccacagctt ctgcccaccg tgaacataaa
     1081 catcataacg cccgcacgcc agataacacc aatccaacgt actgctgccc atactccgta
     1141 tcgttccaaa aggcgcgagc gtactcatac ggctggaaag tttgcccgaa cgcaaatatt
     1201 tgatttccac gcccgcaatc gcctcattga gttttttatc cacgagacgc aaaggcaggc
     1261 gggttccatt aagaaacgca ccctgccccc gttcggcata aaaacattcg ccgctgaccg
     1321 gattgtaaat cacacccaat tcggcgcgcc cgttgcggac aaacgccacc gacacggcaa
     1381 aatgcggcag cccgttgaca aaattgttcg tcccgtctat cggatcgaca atccacagcc
     1441 ccttttcccc cgaatattgt tcccacaaag ccgactgttc ctgccgcgac atttcctcgc
     1501 ccaacatcgg actgtcgatt aaaagcggca acgcggcggc aaaagccgtc tgcgcggcaa
     1561 tgtccgcctc gctcaacatc gaaccgtctt ccttgcggtg agacggcgta ttcaaaaaac
     1621 gcggcataat ttcggtttgc gcgatatggc gcacgacttt ctgcaaacgg tgtaacactt
     1681 cctactgtcc tcatattttg aacttgcggc acgcgaacgt atatagtgga ttaaatttaa
     1741 atcaggacaa ggcgacgaag ccgcagacag tacaaatagt acggcaaggc gaggcaacgc
     1801 tgtactggtt taaatttaat ccactataat gtccgtttcc atcacgccgc tgcgacagat
     1861 tataaccgtc cgaaccgcca aaaactatgc cccgattcta cctgcccgaa aacctttccg
     1921 tcggacaaac cgtcgccctg cccgacaaca tcgtccgcca cctcaacgtc ctacgcgtcc
     1981 gccccaacga aaacatcacc ctcttcgacg gcaaaggcaa ggcacacgcc gcacagctga
     2041 ccgttttgga aaaacgccgc gccgaagccg aaatcctgca cgaagacaca accgacaacg
     2101 agtccccgct caacatcaca ctgatacaat ccatctcctc cggcgatcgc atggatttca
     2161 ccctgcaaaa aagcgtcgaa ctcggcgtaa ccgccataca gcccgtcatc agcgaacgct
     2221 gcatcgtccg cctcgacgga gaacgcgccg ccaaacgcct cgcacgctgg caggaaatcg
     2281 tcatctccgc gtgcgaacaa agcggcagga acaccgttcc ccccgtactg cccatcatcg
     2341 gctaccgtga agcactcgac aaaatgccgt ctgaaagcac caagctgatt atgagcatca
     2401 accgcgcccg caaactcggc gacatccgcc aaccgtccgg cgcaatcgtc tttatggtcg
     2461 ggcctgaagg cggctggaca gaacaggaag aacaacaggc atttgatgcc ggctttcagg
     2521 cggttacact cggcaaacgg attttacgca cagaaaccgc cccactcgcc gccctcgccg
     2581 ccatgcagac gctttggggc gatttcgcat aaacagaaat gccgtctgaa acccgttcag
     2641 acggcatttt gcagccgatt aagatagtag gttcaaataa gatttcccgt gtcgtcattc
     2701 ccgcgaaagc gggaatctag aaacgaaaaa ctacagggat ttatccgaaa caacaaccct
     2761 ctccgccgtc attcccgcgc a
//
LOCUS       DBBZXW010000159         2691 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.159, whole genome shotgun sequence.
ACCESSION   DBBZXW010000159 DBBZXW010000000
VERSION     DBBZXW010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.159"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..202)
                     /locus_tag="ACJJD2_002033"
     CDS             complement(<1..202)
                     /locus_tag="ACJJD2_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580494.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNR"
     gene            complement(199..744)
                     /locus_tag="ACJJD2_002034"
     CDS             complement(199..744)
                     /locus_tag="ACJJD2_002034"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7580495.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAARV"
     gene            complement(901..1329)
                     /locus_tag="ACJJD2_002035"
     CDS             complement(901..1329)
                     /locus_tag="ACJJD2_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HGG7580496.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(1310..1744)
                     /locus_tag="ACJJD2_002036"
     CDS             complement(1310..1744)
                     /locus_tag="ACJJD2_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HGG7580497.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
     gene            complement(1901..2691)
                     /locus_tag="ACJJD2_002037"
                     /pseudo
     CDS             complement(1901..2691)
                     /locus_tag="ACJJD2_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          607 a          759 c          609 g          716 t
ORIGIN      
        1 gacgattctt gcgtttgcgc gccgcgcgtt tggctgccgc cacgcctgag tttcttaaat
       61 ttgggcgtgg ataggtgtgt atcggacgaa catttggcat ctgtataagt gcgcggttta
      121 cctgctcatt actaggattt tctccaatca attttgtaag aaaataggaa gcagcttctt
      181 tcaatttacc aataatattc atactcttgc cgcccccaat tccatcgcaa tcgcgtccgc
      241 aatcgcgcgg cagatgcccc atttagtagt cttaaacaag gctaaatcag tgtcgttgct
      301 gataaaaaac ggctcaaaca caatgccgcc ggcttgtgca taagccaggc gcgaatgctg
      361 gcccgcattg tcgggtttaa agccgtcttc gccgcgcagt ttccagccgg ttttcttggc
      421 aacagctttg ctcaacacct gacaccagcg tttgttttta acggtactca aggcttcgat
      481 gcctgtcgcc gctttgctga cggcagcgtt ggtgtgaaac tcaatcgcca catccgagcc
      541 gcgaatcagc ttgaccgcat cgcgcaaggg catattgcct ttgccttcgc cgtcggtgcg
      601 tacggtcagg ccgtaatcgt tacgcaggat tgaagccacg atgttgcgca tatcctgcgc
      661 caagtccgcc tcacggtcgc ttccgttgac cgcgcccggg tcggtgttac tgtgtccggc
      721 ggttaaagtt acagttttgc ccattcatca tctccaaaaa atattgattg cataacattt
      781 gaaaacccca ttaaaccgtc tttaacccat cgtcccgaac ggtagatgtt tcatccccta
      841 caaaccaaaa aaaaagaccg tctgaataca gacggccaaa gcctggtcac acatcactgc
      901 ctaaaataaa gctgcctgct gtgccgcagg tcggctcatt tcattgataa tcgtatatcc
      961 tgttcgtgaa gagataccgt atttagggca tagcttcgtc atcgccataa gcccgctctc
     1021 cttatcaata tcgcgcaatt tgacaaactc ctgataaaac ctatggtttc tcaactgtat
     1081 taacgccttg ccgcaccgtg ggacatacaa ttcctcgcca ccatatacct gcaacagctc
     1141 atgtgttttc acttcgccga tggcttcgac caaaattgcc aaacgctcgg tgtccacctt
     1201 gcccttacca aatttaaacc gcgccccgcc aatcgccttg accagctgtt ccgtcgctgc
     1261 cagtccgatg acatccacaa tgtccaacac ggtatccggc aataaatgtt caactttttc
     1321 gaaccccatc atccccaccc gctttttccg ttttcctgtt ttccgcaatc tgcaacgcag
     1381 caaccagttt atgtagctgc gtatcgtcta aatattcgac cttatcctta ccaaacatcc
     1441 gccgcgccat tgcgtgtgca tagttccaat gtttgccgcc gacggtcagc agggcttcga
     1501 ctttgtccaa cattgccgct gatgatgtcc gacgcagatg cggtttgccg tgtgggttac
     1561 cttttgcttt aggcttaaat ccgtgcgacc gcatatcagc gacaacagac tcaagttcgg
     1621 aaacatccat atccgcacac gaccgcttgc ccgtcacgcg ctccaacacc gcgcgatagg
     1681 taccatcgtc caagcccagc tccttttggg caattttaat ttttgcaatc aacgcccggc
     1741 gcatctcaaa cccataaaac acaatatatt tactaattaa cgcatattat accaataaaa
     1801 tacaatatat agtattaagc cgctgttttt tgcgaaacgg acagacataa aaaagcaact
     1861 gtatttttca ccccgtcggg caaaaatacc aaaactcaaa tcaagccgtc cggataccgt
     1921 tttcggcggt atcgttttcg gcggtatcgt tttcggcaaa ataatcacgc atccgggcat
     1981 tcgatatcgt cagcagtttg cgcatacatg ccgtaacggc aaccttatac ggcttaccct
     2041 cggacggcag gcgttggtag aaatcccgaa taagcggttc aaaacgtgtc gctgccacgg
     2101 tagccatata cagcgcctta cgtaccgcag actttccgcc aaagcagcgg cttttgaatt
     2161 tggtttcccc gctctccctc gggtgcgggg caatgccggc caaactcgct atccgtttgt
     2221 gcgacagccg ccccaattcg ggcagcatcg ccatcagcgt agccgtcgtt atcgaaccga
     2281 tgcctttgat ttgctccgcc acttgggctt tgccgtcaaa atgcgtgtgg gtgtggtcgt
     2341 cgatttgttt gtccaattcg tcaatcagcc ggtcaaaatg ggcaatcagt tgtttgacgc
     2401 ttccgacttg cgtttcatga acctaatgca gacggttttt ctcggcagtc cgcatatccg
     2461 ccgattggtt gcggcggtta accaaggctt ccaacacttc ttccgcttcg gtgggcggtt
     2521 ggtagggcat ggtttgcgaa tcttctttct gtgccgtcat ctgtgcgaag aaggcgggca
     2581 ttttggcatc tttggcgtcg gttttggtca gcggctgcga ttgggcaaac tgatgcgtct
     2641 gacgcgggtt ggcgataatc acggctatgc ctgctcggcg gatggctttg g
//
LOCUS       DBBZXW010000160         2684 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.160, whole genome shotgun sequence.
ACCESSION   DBBZXW010000160 DBBZXW010000000
VERSION     DBBZXW010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.160"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(13..819)
                     /locus_tag="ACJJD2_002038"
     CDS             complement(13..819)
                     /locus_tag="ACJJD2_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HGG7580498.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILNR"
     gene            1039..2409
                     /gene="ffh"
                     /locus_tag="ACJJD2_002039"
     CDS             1039..2409
                     /gene="ffh"
                     /locus_tag="ACJJD2_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HGG7580499.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFINNVKEKALGQEVAGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLHKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          745 a          671 c          685 g          583 t
ORIGIN      
        1 tgttggctct tcttatctgt tcagaatgat ttccaatacg aacttgctgc ccatataggc
       61 aatcatcagg ctgacaaatc cgatgatggt ccacacggcg gcttttttgc cgcgccatgc
      121 ggtcatgctg tgcttgagca gcagtccgcc gtaaatcagc catgacaata tgccgaatac
      181 ggttttatgg gtaaaggtca tgggtttgcc gaatacggct tcggcaaaaa atgttccgct
      241 gacgacggaa taggtcagca ggatgaaacc tgcccacatg gcctggaaca tgagtttttc
      301 caaactgagc agcgacggca ggaatcctgc gagcttggag aagctcctgc ggtgcaggct
      361 gcgattcagc agcagggtca aaacggacaa taatgttgcg atgccgaaca gcccgtatgc
      421 aagcagcgaa gttccgatat gcagcataaa gggaaggtcg gtaatttcat atcccgagaa
      481 ttttccagga aaaaccaaac ctgacagcag catcagtgcg gcgcaaggat acagcagcaa
      541 ctgcactccg cgcagcggat aaaagaagct gccggcaaaa taaataaaca gcatcatcca
      601 aacaatcagg ctgccggaat acccgaagcc cataatgatg attttgtctt gaatgaccgg
      661 catcagcagt gccgcgccgt ggacggtcaa tgccgcgccc aaaaccggca attccgtctt
      721 ccacgggtaa tcccgaccgc gcccctgctg ttggcagtgc catgcaaatg cacccaatcc
      781 tgcgtaaacc gccgtcaaaa agatgaaaac tgtcggcatg gtggactttc tctatctata
      841 ctgttgcgcc gtctgcggcc gcttatgaaa tattggaact tttaacgttg gaattgtaaa
      901 atccccgttt cgggcaagcc ttgacggatt tgccgatatg ctgtccggca cacaagccgc
      961 atcaaattat tttgatttta ttttaacaaa gaatgcccct gatggggcaa gctattctta
     1021 ttcagaccaa ggaccagtat gttagacaat ttaaccggcc gcttcagcaa tgtcttcaaa
     1081 aacatccggg ggcaggccaa actgaccgaa gacaatatta aagaggcctt gcgcgaagtc
     1141 cgcctcgccc tgcttgaggc ggatgtcgcc ctgcctgtcg tcaaagagtt catcaacaac
     1201 gtcaaagaaa aggccctcgg tcaggaagta gcgggcagcc tgacgccgga tcaggcattt
     1261 atcggcgtgg tcaacaaagc cctgaccgaa ctgatgggca gggaaaacaa aacgctggat
     1321 ttgtcggttg cgccgcccgc cgtcgtgttg atggcaggtt tgcagggcgc aggcaagacg
     1381 acgaccgtcg gcaaactcgc ccgcctgttg aaaaacgatc agaagaaaaa ggttttggtg
     1441 gtatccgccg acgtttaccg tcctgccgcg attgaacagc tgcgtctgtt ggccgaacag
     1501 gtcggcgtgg attttttccc gtccgatacc aaccaaaaac cggttgaaat tgcaactgcc
     1561 gccgtcgatt acgccaaaaa acatttttac gatgtattga tggtcgatac cgccggccgt
     1621 ttggcaatcg atgaagagat gatgaacgaa atcaaagccc ttcacgcggc ggttaacccg
     1681 gtggaaactt tgttcgtcat cgatgcgatg ctgggtcagg atgcggtgaa cactgctcag
     1741 gcatttaatg aagccctgcc gctgaccggt gtcgtattga ccaagatgga cggcgattcg
     1801 cgcggcggcg cagctttgtc cgtgcgccac gtaaccggca aaccgattaa atttatcggt
     1861 gtcggcgaaa aaatcaacgg cctcgaacct ttccaccccg accgtcttgc cagccgtatc
     1921 ctcggcatgg gcgacgtatt gaccctgatt gaagacgttc aaaaaggtat tgatgaagaa
     1981 gccgccgcca aaatggcgaa aaagctgcac aaaggcaaag gcttcgacct caacgacttt
     2041 aaagaacaaa tccagcaaat gcgcaatatg ggcggtttgg aaaacctgat gtcgaaaatg
     2101 ccgggcgaac tgggtcaaat ctcgaaacaa atccccgaag gaacggctga aaaagcgatg
     2161 ggcaaagtag aagccatcat caactcgatg acccctaaag aacgcgccaa ccctgccctg
     2221 ctcaaagcca gccgcaaacg ccgtattgca atgggtgcgg gcacgaccgt acaggaagtg
     2281 aacaaattgc tcaaacagtt tgaacaaatg caacaaatga tgaagatgtt cagcggcaac
     2341 ggcttgggca aactgatgcg tatggcgaaa ggaatgaagg gaatgaaagg aatgttcccg
     2401 ggtttgtaag ccgatttgac cgaaaacgcc gtctaaaatt tcagacggcg tttttgtttt
     2461 atattctgat ttatagtgga ttaacaaaaa tcaggacaag gcggcgagcc gcagacagta
     2521 cagatagtac ggaaccgatt cacttggtgc ttcagcacct tagagaatcg ttctctttga
     2581 gctaaggcga gccaacgccg tactggtttt tgttaatcca ctatatattc tgatttaaaa
     2641 ccataaggct ttaagcaatc atctcttcta taaagcctaa atac
//
LOCUS       DBBZXW010000161         2580 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.161, whole genome shotgun sequence.
ACCESSION   DBBZXW010000161 DBBZXW010000000
VERSION     DBBZXW010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.161"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..288
                     /locus_tag="ACJJD2_002040"
     CDS             <1..288
                     /locus_tag="ACJJD2_002040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580500.1"
                     /translation="KEFCKGLKQKQKPKVPSFPRRRESRPPTRQESIGNNRNRTNLDS
                     RFRGNDGGKVAVFPINSCRSSFLGWREIKQKRAYQKITMQRTVLAILRFAP"
     gene            complement(363..1997)
                     /gene="groL"
                     /locus_tag="ACJJD2_002041"
     CDS             complement(363..1997)
                     /gene="groL"
                     /locus_tag="ACJJD2_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HGG7580501.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLEDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(2090..2380)
                     /gene="groES"
                     /locus_tag="ACJJD2_002042"
     CDS             complement(2090..2380)
                     /gene="groES"
                     /locus_tag="ACJJD2_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HGG7580502.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGAHRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT          527 a          689 c          677 g          687 t
ORIGIN      
        1 aaggaatttt gcaaaggtct caaacaaaaa cagaaaccta aagtcccgtc attcccgcgc
       61 aggcgggaat ccagaccacc aacgcggcag gaatctatcg gaaataaccg aaaccggacg
      121 aacctagatt cccgctttcg cgggaatgac ggcggaaagg ttgctgtttt tccgataaat
      181 tcctgccgct cttcgttttt gggatggcgg gaaataaaac aaaagcgcgc gtatcaaaaa
      241 ataacaatgc aaagaacggt gttggcaatt ttaaggtttg cgccttagcc gcacttattc
      301 gcaaaaaaac cgcacggcgt tgaccgtgcg gcttgttgtc tgaaggcttc agacggcatt
      361 gcttacatca tgccgcccat accacccatg ccgcccatat caggcatagc cggtttgtct
      421 tcagggattt cagcaatcat gcagtctgtg gtcagcatca ggccggcgat agacgcggcg
      481 tgttgcagcg cggaacgggt tactttggcg gggtcgagta cgcccatttc gatcatgtcg
      541 ccgtattcgc cgctgccagc gttgtaacca tagttgcctt tgccttccaa cactttgttc
      601 acaaccacgc tgggttcgcc gcctgcgttg gcaacgattt ggcgcagcgg agactcaacg
      661 gcgcgcaaga cgatttgtac gcctgcgtct tggtctgcat tgccggtgtg caggttttcc
      721 agagcggcac gggcgcgcaa cagggctacg ccgccgcctg cgaccacgcc ttcttcaacg
      781 gctgcgcggg tagcgtgcag cgcgtcttcc acgcggtctt ttttctcttt catttcgact
      841 tcggtagcgg cgccgacttt gatcactgcc acgccgcctg ccaatttagc cacgcgctct
      901 tgcagttttt ctttgtcgta atcgctggtt gcggtttcga tttgttggcg gatttcggca
      961 acacgcgctt cgatttgggc tgcgtcgcca aagccgtcga tgatggtggt gttttcttta
     1021 ccgatttcga tgcgtttggc ttgacccaag tcttccaaag tcgctttttc cagagacagg
     1081 ccgacttctt cggaaatcac cacgccgccg gtcaggatag cgatgtcttg cagcatcgct
     1141 ttgcggcggt cgccgaagcc cggagctttg acggcaacgg ttttcaggat gcctcggatg
     1201 ttgttcacca ccaaagtcgc caaggcttcg ccttctacgt cttcagcgat aatcaacagc
     1261 ggacggctgg ctttcgccac ttgttccaaa acaggcagca ggtcgcggat gttgctgatt
     1321 tttttgtcaa acagcaatac aaacggattg tccaaagcag cgatttgttt ttcagcatcg
     1381 ttgatgaagt aaggggacag gtagccgcgg tcgaactgca taccttcaac cacgtccagc
     1441 tcgttttcca aagatttgcc gtcttcaacg gtaatcacgc cttctttgcc gactttttcc
     1501 atcgcttcgg cgataatcgc gccgacttgt tcgtcagagt tggcggaaat cgagccgact
     1561 tgggcgattt ctttggaagt atcgcaaggt ttggcgatgt ttttcagctc gtcaaccaaa
     1621 gcggcgacgg ctttgtcgat accgcgtttc aggtcggtcg gattcatacc tgcggtaaca
     1681 tatttcatgc cttcggcaac gatggattgt gccagtacgg tggcggtagt cgtaccgtcg
     1741 cccgccacgt cgttggtttt ggacgcaact tctttcacca tttgcgcgcc catattttca
     1801 aacttgtctt tcagttcgat ttctttggcg acggttacgc cgtctttggt gatgtgcggg
     1861 ccgccgaaag cgcggtcaac cactacgttg cggcctttgg gacccagggt tacgcgcacg
     1921 gcgtttgcca aaatgttcac gccgtttacc attttttggc ggacttcatt gccgaactgt
     1981 acgtcttttg ctgccatttc aattctccaa aaatcattaa aactgtctga taaaaccgtt
     2041 tatgccgtct gaaggcggtt tgccgtttca gacggcatcg tgtccatatt tatttttcaa
     2101 cgatgccgaa gatgtcttct tcgcgcatca ccaacagctc ttcgccgtcg gctttgacgg
     2161 tttggccgct gtatttgccg aagatgattt tgtcgccgac tttgacatcc agcggacggt
     2221 gcgcgccgtc tttaccgatt ttgcccgcgc ccacggcgat gacttcgccc atatcgggtt
     2281 tttcggcggc cgcacccggc aaaacgatac ccgatgcggt tttttcttca gcttccaagc
     2341 gtttgacgac gacgcggtcg tgtaaaggac ggatggtcat atttatgctc cgataaaatg
     2401 gtttgaaaac aatcatctgc ccgaacggtt cggacagatt gaagtggaaa ccgggctgcc
     2461 gcctgccggc cgcccgtatg aatcggcaaa attagggtgt gtgcgggcaa attcaagtga
     2521 ggcggaaaaa atttatttcc gccgtttttt atagtggact aaatttaagg ggctgtacta
//
LOCUS       DBBZXW010000162         2578 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.162, whole genome shotgun sequence.
ACCESSION   DBBZXW010000162 DBBZXW010000000
VERSION     DBBZXW010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.162"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..2411
                     /locus_tag="ACJJD2_002043"
                     /pseudo
     CDS             1..2411
                     /locus_tag="ACJJD2_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242392.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
BASE COUNT          742 a          586 c          610 g          640 t
ORIGIN      
        1 cagtcgccgc caaaggcttt tcaggcagcc tcttcgacca taacggcaac ggcatccgca
       61 ccgccactgg ctgggtttct gccgatgacg gtttactcgt ccgcgatttg aacggcaacg
      121 gcatcatcga caacggcgcg gaactcttcg gcgacaacac caaactggca gacggttctt
      181 ttgccaaaca cggctacgca gctttggccg aattggattc aaacggcgac aacatcatca
      241 acgcggcaga cgccgcattc caatccctgc gtgtatggca ggatctcaac caggacggca
      301 tttcccaaac caacgaactc cgcacccttg aagaattggg tattcaatct ttggatctcg
      361 cctataaaga tgtaaataaa aatctcggta acggtaacac tttggctcag caaggcagct
      421 acaccaaaac aaacggtaca accgcaaaaa tgggggattt acttttagca gccgacaacc
      481 tgcacagccg cttcaaagac aaagtggaac tcactgccga acaggcaaaa gccgccaatc
      541 ttgcgggcat tggtcgtctg cgcgatttgc gcgaagctgc cgcattgtcc ggcgatttgg
      601 ccaatatgct gaaagcttat tctgccgccg aaactaaaga agcacagttg gcattgttag
      661 ataatttgat tcacaaatgg gcggaaaccg attcgaactg gggcaaaaaa tcgccaatgc
      721 gactttcaac cgattggacg caaacggcta atgaaggtat tgcactgaca ccatcccaag
      781 tagcacaact aaaaaagaac gctttagttt ccctttctga taaagctaaa gcaactattg
      841 acgccgcccg cgaccgcatt gccgtgcttg atgcctacac ggggcaggat tccaacacac
      901 tctattacat gagcgaggaa gatgcgctta atatcgtcaa agtaaccaac gatacatacg
      961 accatctcgc caaaaacatc taccaaaacc tgttattcca aacccgtttg cagccatatt
     1021 tgaatcaaat cagtttcaaa atggaaaatg atacgttcac tttggatttt agtggtcttg
     1081 ttcaagcatt taaccatgtc aaagaaacta atccgcaaaa agcttttgtg gatttggccg
     1141 agatgcttgc atatggcgaa cttcgttctt ggtatgaagg ccgaagacta atggccgatt
     1201 atgtggagga ggcaaaaaaa gcaggtaaat ttgaagatta ccagaaagtg ttgggtcagg
     1261 agaccgttgc attattagct aaaacatcgg gtacgcaagc agatgatatc ctgcaaaatg
     1321 taggctttgg tcataataaa aatgtttctt tatatggtaa tgacggcaac gacactctga
     1381 tcggcggtgc aggcaatgat tacttggagg gcggcagcgg ttcggatact tatgtcttcg
     1441 gcaaaggctt cggtcaggat acggtctata attacgacta cgctaccgga cgcaaagaca
     1501 tcatccgctt taccgacggt attacagccg atatgctgac ttttacccga gagggcaacc
     1561 atcttcttat caaggcaaaa gacggcagtg gacaagtgac tgttcagtcc tatttctaga
     1621 acgatggctc aggtgcttac cgtatcgatg agattcattt cgataacggc aaagtactgg
     1681 atgttgccac tgtcaaaaaa ctggtacagc aatccaccga cggttcggac agattgtatg
     1741 cctaccaatc cggaagtacc ttaaatggcg gattgggcga tgactatctg tacggtgccg
     1801 acgggaatga cctgctgaat ggtgatgcag gcaacgacag tatctacagt ggcaatggca
     1861 atgatacgct caatggagga gaaggcaacg acgccctgta cggctataat ggtaacgatg
     1921 cactgaatgg tggcgaaggc aatgatcatt tgaacggcga agacggtaac gacactctga
     1981 tcggcggtgc cggtaatgat tacttggagg gcggcagcgg ttcggatact tatgtcttcg
     2041 gcgaaggctt cggtcaggat acggtctata attaccatgt ggataaaaac tctgacacta
     2101 tgcactttaa aggatttaaa gcagcagatg ttcattttat ccgttccgga agtgatttgg
     2161 tgcttagcgc ttctgaacaa gacaacgtac gtatttccgg attcttctat ggtgaaaacc
     2221 atcgtgtaga tacatttgtc tttgatgatg cagctatcag taatccagat tttgccaagt
     2281 atattaatgc tggcaataat ttggtacagt ctatgtctgt gttcggttct aatactgctg
     2341 cgacaggagg aaatgtggat gccaatatac aatccgtaca gcagccgtta ttggtaacgc
     2401 catctgcata aggagcctaa tcacattcat ggcttaaact gaaaaacagc aatcaagttt
     2461 attttgattg ctgtttttct taatattggg ataagggtcg tattttaatt aaccttaatc
     2521 ggtgcacttc tagcaatata gtggattcac aaaaaccagt acagcgttgc ctcgcctt
//
LOCUS       DBBZXW010000163         2533 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.163, whole genome shotgun sequence.
ACCESSION   DBBZXW010000163 DBBZXW010000000
VERSION     DBBZXW010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.163"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..185
                     /locus_tag="ACJJD2_002044"
     CDS             <1..185
                     /locus_tag="ACJJD2_002044"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580503.1"
                     /translation="KSWNACVLEHTPYAWILGFMQATACCCGIKVFLVIYCFWYFCPT
                     GLKIQLLLLLHDIGKI"
     gene            complement(153..536)
                     /locus_tag="ACJJD2_002045"
     CDS             complement(153..536)
                     /locus_tag="ACJJD2_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580504.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            complement(541..1378)
                     /locus_tag="ACJJD2_002046"
                     /pseudo
     CDS             complement(541..1378)
                     /locus_tag="ACJJD2_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase domain-containing protein"
     gene            complement(1677..2072)
                     /locus_tag="ACJJD2_002047"
     CDS             complement(1677..2072)
                     /locus_tag="ACJJD2_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580505.1"
                     /translation="MNQFCLSEYEKAFLCRIIENNMIWKEYLIEQIENSIIVSRDNTG
                     CGCYIDFQVNLERTNLNKYENIPIFFEGDITAPDKSDAATFLLYTTESLNKAGRIIDF
                     LEVAIAGTNYDEVEVYSWLKMENSLRFGL"
     gene            complement(2084..>2533)
                     /locus_tag="ACJJD2_002048"
     CDS             complement(2084..>2533)
                     /locus_tag="ACJJD2_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580506.1"
                     /translation="ENNSLFQPQTTLEAGVRNAILRGDIQELRLLLGEANFSTADAAY
                     AQRILASMEKIGESNSRLLAERYGVDWLNKVHHIFKGHQGSIGNTLIQKSGSMENAVV
                     ATQKAVDALKLTKTGNYPVTVTVNGITVIVRVYVNNGVSRIATILKM"
BASE COUNT          757 a          480 c          407 g          889 t
ORIGIN      
        1 gtaaatcatg gaacgcgtgc gtgctggagc acacacctta cgcatggatt ttaggtttca
       61 tgcaggctac agcttgctgc tgcggtataa aagtattttt agtgatttac tgtttttggt
      121 atttttgccc gacggggtta aaaatacagt tgctactctt gctgcatgat attggcaaga
      181 tttaatttaa atgtttgttg aatcttgttt acatccttag caaaaatatg atagtcactc
      241 gaagaataga tagattttat tctatccaaa ttagtttgtt gataacattt tttcatttcc
      301 gcgatgaaaa aattatcttt tcctctttca ttgagacagt tattttctaa cagatagatt
      361 gcccatgctg taaaaataaa tgtactatct tccggatatt cagataaata aatttcgaat
      421 tcaattatag aatattcagc tgcttcaatt aatgttatat ctaaatccct gacaaatttt
      481 tccgttatat ttttaaataa tttcttgaat tctatataat tttttatttt ttccatgatt
      541 ctattttcct gtaaaaatat ttaattgaat atttggatag cgatttctaa actctaaaat
      601 aacattgctg caagattgac aggcctttaa ttctgtaaat agatcaattc tacctgatac
      661 attacgatta tttccgagtt gctgtgctat agtttcaagt aatttatatt ctccatctat
      721 atttcttaat gttcctctag gaggagaggc aatattatga tatttatcaa cagatatagg
      781 tttaaaaatt tttgtttcag gtaacgaaat aaatccatgt tccccttttt ggaaagaact
      841 aaatgcttcc atcctttgcg gtaatccttt aacatcaatt tttgctatcg caagattccc
      901 tatttgtcga tactcttccg gcagtttcat gcggactctc tggctttcag cagttaaaag
      961 caggagcact gtcattgctc agataacggg taacaggtgt aggcttggcc gatattgcag
     1021 cctgtgcaga tacagatcct gcaaccatca atgtgccatt aacaacctga actgtaccat
     1081 gcagatattc tccattagag attgctttcg ctccctgtcc aatgttatat ccccctgctg
     1141 ccacagtagc tgctttgaca ctgaagccaa gcggtccgtt taataagtaa agtgcaggtt
     1201 gtgcggcaac agctgatttg taatcaaaag aatcataacg actcaatgtt tgataggctt
     1261 tcgataaagt gttattaata tctttggaag gaatagtgag attacccatt gactggggcg
     1321 ttttcagtat cgaagctgcc caagctgtgt tacctccaga ggcttggtta ataaaatatg
     1381 ttacctatgt atattgtttc ttcaaaaatc aaccgtattg tccttgggtg attttcgtac
     1441 cagcacaatc agtctgccct agttgacaga tcgcgccaca ctagccagat acagcgtatc
     1501 attggtaaaa ctgataatgc ggcaatataa agaaaaactt caatagtatg ttaacgaaat
     1561 ttgacgcata aaaatacgct aaaaaatttt cgcttgacta attaaaaatg ggattgagca
     1621 taaaatttta ataatttata ttattgaaaa tatctcagat tttcagtcag tttattttac
     1681 aagccgaacc gtaggctatt ttccatcttt aaccatgaat agacctcaac ttcatcataa
     1741 tttgtgcctg caatagcaac ttccagaaag tcaataattc tacctgcttt attcaaagac
     1801 tctgtagtat atagcaggaa agtcgctgca tctgacttat ccggtgcagt gatgtctcct
     1861 tcaaaaaaaa tagggatatt ttcgtattta tttagattag ttctttctaa atttacctga
     1921 aaatcaatgt agcacccaca tcctgtatta tctctagata ctattattga attttctatt
     1981 tgctctatta aatattcctt ccatatcata ttgttttcaa taattctaca taagaaagcc
     2041 ttctcatatt cagataaaca aaactggttc atatattcta cccttacatt ttcaaaatag
     2101 ttgcaatacg agatactcca ttgttgacat atacgcgaac aattaccgtt ataccattga
     2161 ccgttacagt aactggataa tttcctgttt ttgtcagttt taaagcatcc actgcctttt
     2221 gcgtcgctac aacagcattt tccatggagc ctgatttttg aatcaatgta ttaccgatgc
     2281 ttccttgatg ccccttaaag atgtgatgaa ctttatttag ccaatctaca ccgtatcttt
     2341 cagccaatag tcgagaatta ctttcaccta ttttttccat cgaagctaaa atcctttgag
     2401 cataggcagc atcagctgtt gaaaaatttg cttcgcccaa caaaagccgt aattcctgaa
     2461 tatctcctcg taaaattgca tttcttactc ccgcttctaa tgtggtttgt ggctgaaaga
     2521 gggaattatt ctc
//
LOCUS       DBBZXW010000164         2441 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.164, whole genome shotgun sequence.
ACCESSION   DBBZXW010000164 DBBZXW010000000
VERSION     DBBZXW010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.164"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..819
                     /locus_tag="ACJJD2_002049"
     CDS             <1..819
                     /locus_tag="ACJJD2_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7580507.1"
                     /translation="ATANKGKCQDGAIGAAVGEIVGEALVKNTDFSDMTPEQLDLEVK
                     KITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNG
                     KINVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKGEAAQK
                     VKEVLEKNRPYIPNKGAVPNMSTYMKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQ
                     GLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAAKGRKLNLK"
     gene            828..1205
                     /locus_tag="ACJJD2_002050"
     CDS             828..1205
                     /locus_tag="ACJJD2_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580508.1"
                     /translation="METLNDIKKILINVGLYQGFDLTDPKVSEEVNHETANMKWIKDY
                     TSDGNWDNEFKEDLKNFLDYMEVCQLALNDKNFKIASNSLFMAMIYAGNLSLIFDSIK
                     TDISTLLSAEYKKNSFSWPSLDE"
     gene            1483..1857
                     /locus_tag="ACJJD2_002051"
     CDS             1483..1857
                     /locus_tag="ACJJD2_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580509.1"
                     /translation="MKNFNVVKESLRELGIKQGFDLYEKATTEKLNSEDPLDLQWLSN
                     YSSDWNDELEEDFDSFFQHMKEYQYAIDNEDIKSACSSLCEAMLYVGNIKNFFEFLKS
                     DMIRLLRGESKTTDFQWPQFDE"
     gene            1928..>2441
                     /locus_tag="ACJJD2_002052"
     CDS             1928..>2441
                     /locus_tag="ACJJD2_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7580510.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACY
                     LKQLQVTKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVTVVTAGAGAGAALGLNG
                     AAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLMVAVATAGVADKIG
                     ASALNNVSDKQ"
BASE COUNT          820 a          424 c          553 g          644 t
ORIGIN      
        1 gcgacggcga ataagggtaa gtgtcaggac ggtgcgattg gcgcagccgt gggtgagatt
       61 gttggggaag ctttggttaa aaataccgat tttagcgata tgaccccgga acaattagat
      121 ctggaagtta agaaaattac cgcctatgcc aaacttgcgg caggtacagt tgcaggcgta
      181 acgggaggag atgtcaatac tgctgcacaa accgcacaaa acgcggtaga aaataatgcg
      241 gttaaagctg ttgtaactgc tgcaaaagtg gtttataagg tagccagaaa aggattaaaa
      301 aacgggaaaa tcaacgttag agatttaaaa cagacgttga aagacgaagg ttataattta
      361 gccgacaacc tgaccacctt attcgacgaa acattggatt ggaacgatgc caaagccgtt
      421 attgatattg tcgtcggaac agagctgaat cgcgctaata aaggggaagc ggcacaaaag
      481 gtcaaggaag ttttagaaaa aaatcgtcct tatatcccta ataaaggtgc tgtaccgaat
      541 atgagtacat acatgaaaaa taatcctttt ggaaaacagc tggctcaaat ttcagaaaag
      601 acaacgcttc cgacgcagca agggcagtct gtcttcttgg taaaaagaaa ccaagggtta
      661 ttaaaaaccg gtgataggtt ttatttagat ggccaacata aaaatcattt agaggttttt
      721 gataaaaatg ggaactttaa gtttgttcta aatatggatg gttcgcttaa ccaaatgaaa
      781 actggggcag caaaaggtcg taaattaaac ttaaaatagg aaattttatg gaaacattga
      841 atgatataaa aaaaatcttg attaatgtgg ggctttatca agggtttgat ttgacagatc
      901 caaaagtatc agaagaagtt aatcatgaaa cagctaatat gaaatggatt aaagattata
      961 cttcagacgg gaattgggat aatgaattta aggaggattt aaaaaacttt ttagattata
     1021 tggaagtatg ccaattagcc ctaaacgata aaaatttcaa aattgccagt aattctttat
     1081 ttatggctat gatttacgca ggtaatctat ctcttatatt tgattcaata aaaactgata
     1141 tatcaacatt attgagtgct gagtataaaa agaatagttt ttcatggcca tctcttgatg
     1201 aatagaaagc aagttgtagc ctgcatgaaa tctaaaaccc atgcataagg tgtgggcttc
     1261 agtatacgcg ttccatgatt tacggccata tgccgtctga aaagctcaat tttttcagac
     1321 ggcatttgtt atgaaagtaa atatttagat tccctgtata ctgtttagac tcgtgtgtgc
     1381 tgagtaagct gtagtctgca tgaaacctaa aactcgctca aaattaagct aagacattag
     1441 cagggcaagg gcgaaaattg aatcttaaat aaggtgattc agatgaaaaa ttttaatgta
     1501 gtaaaagaaa gtttaagaga gttaggaatt aaacaaggat ttgatcttta tgagaaagcc
     1561 acaactgaaa aattgaatag tgaagatcct cttgacttac aatggctttc taactattca
     1621 tctgattgga atgatgaatt agaagaagac tttgattctt tttttcagca tatgaaggaa
     1681 tatcaatatg ctattgacaa tgaagacatt aaatctgcat gtagttcact atgtgaagct
     1741 atgctctatg ttggtaatat taaaaatttt tttgagtttc tcaaaagcga tatgattaga
     1801 ctgttgagag gtgaaagtaa aacaacagac tttcaatggc cgcaatttga tgaatagcag
     1861 caagctgtag cctgcatgaa acctaaaatc catgcgtaag gtgtgtgctt cagcacgcac
     1921 gcgttccatg atttacggct caatgccgtc tgaaaagctc acaatttttc agacggcatt
     1981 tgttatgcaa gtaaatattc agattcccta tatactgccc agatgcgtgc gtgctgaaga
     2041 caccccctac gcttgctatt tgaaacagct ccaagtcacc aaagacgtca actggaacca
     2101 ggtacaactg gcgtacgaca aatgggacta taaacaggaa ggcttaaccg gagccggagc
     2161 agcgattatt gcgctggctg ttaccgtggt tactgcgggc gcgggagccg gagccgcact
     2221 gggcttaaac ggcgcggccg cagcggcaac cgatgccgca ttcgcctcgc tggccagcca
     2281 ggcttccgta tcgctcatca acaacaaagg caatatcggt aacaccctga aagagctggg
     2341 cagaagcagc acggtgaaaa atctgatggt tgccgtcgct accgcaggcg tagccgacaa
     2401 aatcggtgct tcggcactga acaatgtcag cgataagcag t
//
LOCUS       DBBZXW010000165         2441 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.165, whole genome shotgun sequence.
ACCESSION   DBBZXW010000165 DBBZXW010000000
VERSION     DBBZXW010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.165"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            44..1399
                     /locus_tag="ACJJD2_002053"
     CDS             44..1399
                     /locus_tag="ACJJD2_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HGG7580511.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHSLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMMGGLQANMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1403..2413
                     /locus_tag="ACJJD2_002054"
     CDS             1403..2413
                     /locus_tag="ACJJD2_002054"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HGG7580512.1"
                     /translation="MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFS
                     VLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGR
                     NALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDRLTV
                     SYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDLEVF
                     DFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDRNGL
                     VIFTAAPQDFARHDAGVYDALATEAQTLPDSLHWPEFGNIRLNKGDTREATIAYGIES
                     LS"
BASE COUNT          453 a          662 c          729 g          597 t
ORIGIN      
        1 tgttaatcta ctatactttt caaatcaaaa aaggatttac cttatgtcgg aatatacgcc
       61 tcaaacagca aaacaaggtt tgcccgcgct ggcaaaaagc acgatttgga tgctcagttt
      121 cggctttctc ggcgttcaga cggcctttac cctgcaaagc tcgcagatga gccgcatctt
      181 ccagacgctc ggtgccgatc cgcacagcct cggctggttc tttatcctgc cgccgctggc
      241 ggggatgctg gtgcagccga ttgtcggcca ttactccgac cgcacttgga agccgcgttt
      301 gggcggccgc cgtctgccgt atctgcttta tggcacgctg attgcggtta ttgtgatgat
      361 tttgatgccg aactcgggca gcttcggttt cggctatgcg tcgctggcgg ctttgtcgtt
      421 cggcgcgctg atgattgcgc tgttggacgt gtcgtcaaat atggcgatgc agccgtttaa
      481 gatgatggtc ggcgacatgg tcaacgagga gcagaaaggc tacgcctacg ggattcaaag
      541 tttcttagca aatacgggcg cggtcgtggc ggcgattctg ccgtttgtgt ttgcgtatat
      601 cggtttggcg aacaccgccg agaaaggcgt tgtgccacaa accgtggtcg tagcattcta
      661 tgtgggcgcg gcattactga ttattaccag tgcgttcaca atcttcaaag tcaaagaata
      721 cgacccggaa acctatgccc gttaccacgg catcgatgtc gccgcgaatc aggaaaaagc
      781 caactggttc gaactcttaa aaacggcacc taaagcgttt tggacggtta ctctggtaca
      841 gtttttctgc tggttcgcct tccaatatat gtggacttac tcggcaggcg cgattgcgga
      901 aaacgtctgg cacaccactg atgcgtcttc cgtaggttat caggaggcgg gcaactggta
      961 cggcgttttg gcggcggtgc agtcggttgc ggcggtgatt tgttcgtttg tattggcgaa
     1021 agtgccgaat aaataccata aggcgggtta tttcggctgt ttggctttgg gcgcgctcgg
     1081 ctttttctcc gttttcttca tcggcaacca atacgcgctg gtgttgtctt ataccttaat
     1141 cggcatcgct tgggcgggca ttatcactta tccgctgacg attgtaacca acgccttgtc
     1201 gggcaagcat atgggcactt acttgggcct gtttaacggc tctatctgta tgccgcaaat
     1261 cgtcgcttcg ctgttgagtt tcgtgctttt cccgatgatg ggcggtttgc aggccaatat
     1321 gttcttggta gggggcgtcg tcctgctgct gggcgcgttt tccgtgttcc tgattaaaga
     1381 aacacacggc ggggtttgag cgatgagcga tacccccgct acccgcgatt tcggtctgat
     1441 cgacgggcgt gccgtaaccg gctatgtgct gtccaaccgg cgtggtacgc gtgtctgcgt
     1501 gctggacttg ggcgggattg tgcaggaatt ttccgttttg gcagacggcg tgcgcgaaaa
     1561 cctcgtggtg tcgttcgatg atgcggcttc ctatgcggac aatccgtttc agattaacaa
     1621 acagataggg cgcgtggccg gacgcatccg cggtgcggcg ttcgacatca acggcaggac
     1681 ttaccgcgtg gaggccaacg aaggcaggaa cgcgctgcac ggcggttcgc acgggctggc
     1741 cgttacccgt ttcaacgcgg tggcggcaga cggccgttcg gtggtgctgc gcagccgcct
     1801 gcaacagtcg gccgacggtt atcccaacga tttggatttg gatatttcct accgcttgga
     1861 cgaggacgac cggcttaccg ttagctatcg cgccaccgcg ctcggcgaca cggtgttcga
     1921 cccgacgctg cacatttact ggcggctgga cgcgggcctg cacgatgcgg ttctgcatat
     1981 tccgcagggc ggacatattc cggccgatgc cgaaaaactg cccgtctcaa cggtttcaga
     2041 cgacctcgaa gtatttgatt tcagccggcc caagccgctg gatgccgccg ttgccgccct
     2101 gcgccgcgaa acgggtcggg ccggttttga cgacgcttac cgcgtgccgt ccgatatagg
     2161 ccgtcccgcc gctgtgttgc aagccggacg ccgccgtcgt atcagcatat acagcgaccg
     2221 caatggcttg gtcatcttta ccgccgcccc gcaggatttc gcgcggcacg atgcgggcgt
     2281 ttacgacgcg ctggcgaccg aggcgcagac gctgcccgac agcctgcatt ggcccgagtt
     2341 cggcaatatt cgtctgaaca agggtgatac cagggaggcg acgattgctt acggcatcga
     2401 atccctttct taggagcttc ctaacaccgg ttgcagacgg c
//
LOCUS       DBBZXW010000166         2422 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.166, whole genome shotgun sequence.
ACCESSION   DBBZXW010000166 DBBZXW010000000
VERSION     DBBZXW010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.166"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1471
                     /locus_tag="ACJJD2_002055"
     CDS             <1..1471
                     /locus_tag="ACJJD2_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7580513.1"
                     /translation="LAAPYLDKAAENLGTAGKAAVNALGGAAIGYAAGGNVGTAAVGA
                     NVDWNNRQLHNSEIRKIKNNAAKFAKLHPGISQRQAEERLVAQAMRQVDAAYYAKHAD
                     TDTAAEQFLRSIAGSFKADGETFLDFAPMKYYRDSGKFAEHTGYRDLRAKLGQNPVHT
                     EAQRNRTIEEKTYGTIGRGVGKGIGNTLANNLQAGPPHYVLGITNYSNWGKELIPYEN
                     PVERAIGKQAEDMTEKAVAAVSLGRSLPSKVVNVPSKLAKSIKTAETHKPLVQKRTET
                     YFRVEGGGSGNNQAAKAAKNTEKMKAAIDQTHSGVDLPYDSRQIRAKLEKRYGAENIV
                     STTIPKKPVQSINNQTKPDYSSIVYTNKSGKVVNVKYKDPISGESKAVNIAYDNRGLP
                     IFDNVSNFTTKIDNSLSYTGQMRAATKDLWKAIESGQVPKNQFTNEQLTKIKAGNEKI
                     PGYTWHHNAQSSPNNMQLIPNSIHTAVRHTGQKSLKKGQ"
     gene            1474..1950
                     /locus_tag="ACJJD2_002056"
     CDS             1474..1950
                     /locus_tag="ACJJD2_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7580514.1"
                     /translation="MRKLSISSDEGLVPIRTIQQFAEDVGVVFPASYVSLLSKHDHLY
                     PKENIFNFVNQYGENDERDISFLGYKQDLGYEDIYSYSCIDDEYGYAKKVIAFGISAN
                     GDYICFDYRKCNENPCIILMYHDDFYEDENGDTKMVTSHIADSFDAFLDMLYELSD"
     gene            2064..>2422
                     /locus_tag="ACJJD2_002057"
     CDS             2064..>2422
                     /locus_tag="ACJJD2_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7580515.1"
                     /translation="MRFSRFEPKGRLKQQIRFQTTFLSTSHHGNQTKAAHRHIHVGST
                     AGTTTIRSGGDTTLKGAQLIGKGIQADTRNLHIESVQDTETYQSKQQNASAQVTVGYG
                     FSASGDYSQSKIRADHAS"
BASE COUNT          822 a          487 c          563 g          550 t
ORIGIN      
        1 ccttgccgca ccgtatttgg acaaagcggc ggaaaacctc ggtacggcgg gcaaagcggc
       61 ggtcaacgca ctgggcgggg cggcaatcgg ctatgcggcg ggcgggaatg tcggcacggc
      121 ggcagtaggg gcgaatgtcg attggaacaa taggcagctg cacaacagcg agatcagaaa
      181 aattaaaaat aatgccgcta aatttgccaa actccatccc ggcatttccc aacggcaggc
      241 agaagagcgg ctggtggcac aagctatgcg tcaggtcgat gcggcttatt atgccaaaca
      301 tgccgacacc gacacggcgg cggaacaatt cctgcgcagc atagcgggaa gtttcaaagc
      361 cgacggggaa acgttcctgg attttgcccc gatgaagtat tacagggaca gcggtaaatt
      421 tgccgaacat acaggctatc gagatctaag agcaaagttg ggacagaatc cggtccatac
      481 cgaagcgcaa aggaacagaa ctattgaaga aaagacctac ggcacaatag gcagaggtgt
      541 aggtaaaggc atcggcaata ccctagccaa caacctgcag gcgggtccgc cacactatgt
      601 actcggcatt acgaactatt cgaactgggg caaagaactt attccatacg agaaccctgt
      661 tgagcgcgcc atcggcaaac aggcagagga tatgacggaa aaagcggtag cagctgtgtc
      721 tttgggccgg agtttgccgt caaaggttgt taatgtaccc tctaaattag ctaaaagcat
      781 taagacagcg gaaacacata aaccactggt acaaaagcgt acggaaactt attttagagt
      841 tgaaggagga ggaagtggaa ataatcaggc agccaaagcc gctaaaaata cggaaaaaat
      901 gaaagccgca atagatcaaa cccacagtgg agttgacctg ccttatgatt cgagacaaat
      961 tcgagctaaa ctggaaaaaa gatatggagc tgagaatatt gtatccacta cgattccaaa
     1021 gaaaccggtc caaagtatca ataatcaaac taaaccggac tactcatcta ttgtatatac
     1081 taataaaagt ggaaaggtag ttaatgttaa atataaagat cctatatcag gggaaagtaa
     1141 ggctgttaat atcgcctatg ataatagggg attacctata tttgataacg tatcaaattt
     1201 taccaccaaa atagataatt cattgtcgta tacgggacag atgagggcag ctactaaaga
     1261 tttatggaaa gctattgaaa gtggacaagt gcccaaaaat caatttacta atgaacaact
     1321 aacgaagatt aaagcaggaa atgaaaaaat tcctggttat acatggcatc ataatgcgca
     1381 aagctctcct aataatatgc agttaattcc taatagtatt catacagctg ttaggcatac
     1441 tggtcaaaaa tcgttaaaga aaggtcagta aaaatgagaa aactatcaat atcatcagat
     1501 gagggattgg ttccaataag aacaattcaa caatttgctg aagatgtagg ggtcgttttt
     1561 cccgcgtcat atgtatcact tcttagtaaa catgatcatt tataccctaa agaaaatatt
     1621 ttcaattttg tcaatcaata cggtgaaaat gatgaaaggg acatttcatt tttagggtat
     1681 aagcaagatt taggctatga agatatttat agctattcat gtattgatga tgaatatggg
     1741 tatgcaaaaa aagtgattgc ttttgggatt tcagccaatg gcgattatat ctgttttgat
     1801 tacagaaaat gcaatgaaaa tccatgtatc attctgatgt atcatgatga tttctatgaa
     1861 gatgagaatg gggatacgaa aatggtaact agccatattg cagatagttt tgatgccttt
     1921 ttggatatgc tatatgaact ttcagattaa gtgtgtaggt tgagttgaaa acccaactaa
     1981 attaaaaagg tcgtctgaaa tcagcaagcc gtagcccata tgaaacctaa actcaacaag
     2041 taggatgtgt gcggaacgca cgcatgcggt tctcaaggtt tgagcccaaa ggtcgtctga
     2101 aacaacaaat acggtttcag acgacctttc tttcaacaag ccaccacggc aatcagacaa
     2161 aagcagcaca tcgccacatc catgtcggca gtacggccgg cacaaccacc atccgcagcg
     2221 gcggggatac caccctcaaa ggtgcgcagc tcatcggcaa aggcatacag gcagatacgc
     2281 gcaacctgca tatagaaagt gttcaagata ctgaaaccta tcaaagcaaa caacaaaacg
     2341 ccagtgcaca agtgaccgta ggttatggct tcagtgccag tggcgattac agccaaagca
     2401 aaatccgagc cgaccatgct tc
//
LOCUS       DBBZXW010000167         2420 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.167, whole genome shotgun sequence.
ACCESSION   DBBZXW010000167 DBBZXW010000000
VERSION     DBBZXW010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.167"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            100..2313
                     /locus_tag="ACJJD2_002058"
     CDS             100..2313
                     /locus_tag="ACJJD2_002058"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG7580516.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPNNDKKLVLAARSLA
                     EAHYPADAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          637 a          770 c          578 g          435 t
ORIGIN      
        1 gaaaatgaga ttgagcataa aattttagta acctatgtta ttgcaaaggt ctcaagctgt
       61 tacaataaac tcgtttttat cggaacggaa gaccccatca tgaccgccat cagcccgatt
      121 caagacacgc aaagcgcgac tctgcaagaa ttgcgcgaat ggttcgacag ctactgcgcc
      181 gcgctgccga acaacgataa aaaacttgtc ttagccgccc gttcgctggc ggaagcacat
      241 taccccgccg atgccgccac gccgtatggc gagccgctgc ccgaccactt cctcggcgcg
      301 gcgcaaatgg ttcatgaact cgacctgctc cccgatgccg tcgccgccac cctgcttgcc
      361 gacatcggac gctacgtccc cgactggaac ctattggttt ccgaacgctg caacagtacc
      421 gtcgccgagc tggtcaaagg tgtggacgaa gtgcagaaac tcacccactt cgcccgggtg
      481 gacagcctcg ccacaccgga agaacgcgcc cagcaggcag aaactatgcg gaaaatgctg
      541 ctggcgatgg ttaccgacat ccgcgtcgtg ttaatcaaac tggcgatgcg tacgcgcacc
      601 ctgcaatttt taagcaacgc ccccgacagc cccgaaaaac gcgccgtcgc caaagaaacc
      661 ctcgacatct tcgccccgct cgccaaccgt ttgggcgtgt ggcagctcaa atggcagctc
      721 gaagatttgg gcttccgcca tcaagagccc gaaaaatacc gcgaaattgc cctgcttttg
      781 gacgaaaaac gtaccgaacg cctcgaatac atcgaaaact tccttaatat cctgcgtacg
      841 gaactcaaaa aatacaatat ccactttgaa gtcgccggcc gtccgaaaca catctactcc
      901 atttacaaaa aaatggtgaa gaaaaaactc agcttcgacg ggttgttcga catccgcgcc
      961 gtgcggattc tggttgatac cgtccccgag tgttacacca cactgggcat tgtccacagc
     1021 ctctggcagc ccattcccgg cgagttcgac gactacatcg ccaacccgaa aggcaacggc
     1081 tataaaagtt tgcacaccgt catcgtcggc ccggaagaca aaggcgtgga agtgcaaatc
     1141 cgcaccttcg atatgcacca attcaacgaa ttcggtgtcg ccgcgcactg gcgttacaaa
     1201 gagggcggca aaggcgattc cgcctacgaa caaaaaatcg cctggttacg ccaacttttg
     1261 gactggcgcg aaaacatggc ggaaagcggc aaggaagacc tcgccgccgc cttcaaaacc
     1321 gagcttttca acgacacgat ttatgttttg accccgcacg gcaaagtcct ctccctgccc
     1381 acaggcgcga cccccatcga cttcgcctac gccctgcaca gcagcatcgg cgaccgttgc
     1441 cgcggtgcga aagtcgaagg gcagattgtg ccgctgtcca ccccgctcga aaacggacag
     1501 cgtgtcgaaa tcattaccgc caaagaaggg catccttccg tcaactggct ttacgaaggc
     1561 tgggtcaaat ccaacaaggc aatcggcaaa atccgcgcct acatccgcca gcaaaacgcc
     1621 gacaccgtgc gcgaagaagg ccgcgtccaa ctcgacaaac agcttgccaa actcacgccc
     1681 aaacccaacc tgcaagagct tgccgaaaat ctcggctaca aaaagccaga agacctctac
     1741 accgccgtcg gacaaggcga aatttccaac cgcgccatcc aaaaagcctg cggcacgctg
     1801 aacgaaccgc cgcccgtacc cgtcagcgaa accaccatcg tcaaacagtc caaaatcaaa
     1861 aaaggcggca aaaacggcgt gctcatcgac ggcgaagacg gtctgatgac cacgcttgcc
     1921 aaatgctgca aacccgcgcc gcccgacgac attgtcggct tcgttacccg cgatcgcggc
     1981 atttcggtac accgcaaaac ctgcccctct ttccgacacc tcgccgaaca cgcgcccgaa
     2041 aaagtactgg acgcaagttg ggcggcgttg caggaaggac aagtgtttgc cgtcgatatc
     2101 gaaatccgcg cccaagaccg ctccgggctt ttgcgcgacg tatccgacgc gctcgcccgc
     2161 cacaaactca acgttaccgc cgtgcaaacc cagtcccgcg acttggaagc cagtatgcgg
     2221 ttcacgctcg aagtcaaaca ggtcaacgac ctcccgcgcg tcctcgccag cctcggcgac
     2281 gtcaaaggcg tattgagcgt tacccggctt taaatacaaa aatgccgtct gaaagccgaa
     2341 taacgcttca gacggcattt tgattgccgg ggtttgctat tttttgttgc atagtcaatt
     2401 aaaaacaaaa tagtacaata
//
LOCUS       DBBZXW010000168         2382 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.168, whole genome shotgun sequence.
ACCESSION   DBBZXW010000168 DBBZXW010000000
VERSION     DBBZXW010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.168"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..197)
                     /locus_tag="ACJJD2_002059"
     CDS             complement(<1..197)
                     /locus_tag="ACJJD2_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HGG7580517.1"
                     /translation="MKLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKNRVYAV"
     gene            complement(237..362)
                     /locus_tag="ACJJD2_002060"
                     /pseudo
     CDS             complement(237..362)
                     /locus_tag="ACJJD2_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            complement(691..1101)
                     /locus_tag="ACJJD2_002061"
     CDS             complement(691..1101)
                     /locus_tag="ACJJD2_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580518.1"
                     /translation="MKIYNLDNIITSSALSLYKSTWVKLDLISCAKFIIEGTDFTFDW
                     DEGIENWIVFFHKNKVIGYLCAKLPFAILDNEQLKNQLYHKYPHVLTLQIKNIETEKI
                     SLNVNICRLTLCPSFHDEHDTLVCSVQDFYVNTV"
     gene            complement(1689..2072)
                     /locus_tag="ACJJD2_002062"
     CDS             complement(1689..2072)
                     /locus_tag="ACJJD2_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580519.1"
                     /translation="MMTEPHGYPSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYYWLGFDELPQSEKIKFLNYLNILSIHKEIQDKTVNRVYTDCFDIDKLHSLGRI
                     TTNECINGIKKIYQKNKLEFDNILK"
     gene            complement(2038..>2382)
                     /locus_tag="ACJJD2_002063"
     CDS             complement(2038..>2382)
                     /locus_tag="ACJJD2_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HGG7580520.1"
                     /translation="NKPPKPSTQQHSTHSDNNIGLPAPYVKPDTSISPTGTIYVDSKG
                     NAIPTPIGGYITGSPDARFIQVRDSNGNLTGARIDDAHHANTHQDPRALTGHAHVPGV
                     TNDDGTPWLPIK"
BASE COUNT          688 a          434 c          411 g          849 t
ORIGIN      
        1 tggacggcgt aaacccgatt tttaacactg ccgcgagcat taccaaacag atggtattta
       61 ccacccggtt cgtagtgttt tgcctgcata tcatcgcgta aacgggcatc caaaccgttc
      121 gcatgactaa tggggatttg cagcaacgat attgccgctg caaacagcat catgaatttt
      181 tgaataggca atttcatttt gttttccttg gtagcaagcg gttatggtcg tgtgaatcaa
      241 ggttgccctt gtctatgttg tcgcactact tcatcgctgt atccataccc ctcatgactg
      301 ttatcagcct ctacggatgg ggcagagtta cccgtatgat tgccgtatgg tcggatactt
      361 gtatccgaca aaaatatttg acgcgtctat cgtttccgaa atgccgctgt tgaaaaatgt
      421 cggattcgag aatccgacct acggttgctg aacaatgttt tgtagaactt gctcaaaatc
      481 catgtttcgc cattttcctt tatatatacc taatacagca cgggttacga tttcgtttaa
      541 gtcataaata gccatttacg tcctctgcta attttcagcg agtagattgg gttaccaaac
      601 ccaacaaaaa agcagcctga aaaatttcag gatgcttgtt ttatgttttt tatcaatgaa
      661 ttaggtttta atccagcctg cgcttgctag ttaaacagta tttacataaa aatcttgtac
      721 tgaacaaaca agcgtatcat gttcatcatg aaatgatggg cataacgtta atctacaaat
      781 gtttacattt aaagatattt tttcagtttc aatattttta atttgtaagg ttaatacatg
      841 aggatatttg tgatatagct gattttttaa ttgttcgttg tctaatatag caaaaggtaa
      901 ttttgcacac aaataaccaa taactttgtt tttatgaaaa aaaactatcc aattttcaat
      961 tccttcatcc caatcaaaag taaaatccgt tccttctatg ataaatttag cacaagatat
     1021 taaatctaac ttaacccaag tggatttata cagactcaat gctgatgaag ttataatatt
     1081 atctaaatta taaattttca taaatcaacg ttccttacct ggtgttatat gcacaggtct
     1141 aatcccatct ttattcggct ttctacgata aatgttaatt atatgtgtcg gttttccgtc
     1201 tgtatagcca actacgtcgt tcgttggaac ttttgcctta ttttgactat cccataaatt
     1261 atgtttatct gcatatctag cagcatctaa tgtagctttt tccgcatcaa catctgattt
     1321 aaataaactt ttgctatcta tcttgtctag actagatgca tcaggtttgt gtcgtaaaaa
     1381 gcactgtcct gtaataggct cgcggcagca agttgtgctt ccggacttaa ttttcctaaa
     1441 tcattaatac cttgtaaagt ttgctgcgca gagatgtagg tcggatattt gtatccgaca
     1501 aaaatatttg acgcatctat cgtttccgaa atgccgctgt tggaaaatgt cggattcgag
     1561 aatctgacct acggctgctg actattttct tgtttatata attctacaac tgcaaactac
     1621 tatcaaatct ttttatctct ggctctacac tcagcaagaa tatttttatt ttacaaaaca
     1681 taggctagtt atttgagtat attgtcaaat tctaatttgt ttttttgata gatttttttt
     1741 ataccattaa tacattcatt agttgtaatt ctaccaagcg aatgtaattt atcaatatca
     1801 aaacaatcgg tataaaccct attcacagtt ttatcttgta tttccttatg aatacttaat
     1861 atattgagat agtttagaaa ttttattttc tcagattgag gtaactcatc aaaaccaagc
     1921 caataataaa aattgttata tgattttaaa aaatcaacaa tttttatttt tcctaaaacc
     1981 aaatcttcaa ctaactgggt tgcataaata atatcattta tgattttaac aggtaaatta
     2041 tttgatgggt aaccatgggg ttccgtcatc atttgtaact cctggtacat gtgcgtgtcc
     2101 tgtaagtgcg cgtgggtctt gatgggtatt tgcatgatga gcatcatcta ttctggctcc
     2161 agtcaagttt ccattactat ctcggacttg gataaaacga gcatcaggcg aacctgttat
     2221 ataaccgcct attggtgttg gtattgcatt tcctttgctg tctacataaa ttgttcctgt
     2281 cggagaaata gatgtatcag gtttaacata tggggcaggt aagcctatat tgttatcaga
     2341 gtgtgtagag tgttgctgcg tacttggttt cggtggctta tt
//
LOCUS       DBBZXW010000169         2326 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.169, whole genome shotgun sequence.
ACCESSION   DBBZXW010000169 DBBZXW010000000
VERSION     DBBZXW010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.169"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            299..733
                     /locus_tag="ACJJD2_002064"
     CDS             299..733
                     /locus_tag="ACJJD2_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580521.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
     gene            1009..1728
                     /locus_tag="ACJJD2_002065"
     CDS             1009..1728
                     /locus_tag="ACJJD2_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580522.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
     gene            1715..>2326
                     /locus_tag="ACJJD2_002066"
     CDS             1715..>2326
                     /locus_tag="ACJJD2_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580523.1"
                     /translation="MSWNSFGNFMSARSSALAEFGNMVANLVSAKNEKDISKRNEYYK
                     QAGYSALLAFGNLASNIAPGSTSSHIVNGTNASVIASRLSGNISSAIQEHKDGKVNIN
                     RFQNILADLYSLGGLGSTLIEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEF
                     YNFDNWKGFGYELFEDWSRWVYDWLPDGWNLWKELDRNRSGQYH"
BASE COUNT          798 a          284 c          420 g          824 t
ORIGIN      
        1 caaacaaaaa agagaaattt taatttcgct aaatcgcata aagattaatc aagagtatca
       61 ttaaatgata tgagtgagca tctataatgc caagaagagt tgttaagaca taacgattat
      121 tgaaatagat tgtaaaatag atacttagat agtctgaaaa acggatttgt gaaacttttt
      181 attacgcgcc atcatttgaa aatgaaactt aaaaaacact tatcataata aatattttct
      241 ttacgttgtt tgctaataaa ctcagtgcaa tatcagcgca atattttatg gaaattttat
      301 ggataacaaa aaagaattta ttaataattt aacaaatagg tatatgtgga tctatccatt
      361 ggtcttaaat attctatttc taccttttta ccagtcctac caatcttttt ttattgcgct
      421 tggttgtttg tttgcactgg ttagaaaaat gcaaagctta gattttaaat tacaaaatca
      481 tattgtattg ttaaatataa aaagtgcttg ggcagataaa aaagtatttt tgattaggat
      541 agtagtgtca tggttggcag taatggaaat atggatgtgt tttatttcgg aatcatcaac
      601 gtgggtatgc ggtgcttttt gtttaaatag tgaaatattg gaaaaaattt ttcgtggctt
      661 tggttattct ggtagtttat attttttatt tatattgatg attgatctca ataagttaag
      721 agagagtatt tgaatttcat tttttgtttg acttaaactc aaggagagta acaatgattg
      781 gtagtggtga tactaaacaa tgcaaaaaat tttctgcgtg tgatggaaaa taccacgtct
      841 acgatcccct cgccctagac ttggacggcg acggcataga aacagtcacc gccaaaggct
      901 tttcaggcag cctgaagact gagagagtga atacgatgag tatacactct atgccactaa
      961 attgatattc actaaatcat accagctata ttttatttaa tgagacatat gaaaaataaa
     1021 aattatttac tagtatttat agttttacat atagccttga tagtaattaa tatagtgttt
     1081 ggttattttg tttttctatt tgattttttt gcgtttttgt tttttgcaaa cgtctttctt
     1141 gctgtaaatt tattattttt agaaaaaaac ataaaaaaca aattattgtt tttattgccg
     1201 atttctatta ttatatggat ggtaattcat attagtatga taaatataaa attttataaa
     1261 tttgagcatc aaataaagga acaaaatata tcctcgatta ctggggtgat aaaaccacat
     1321 gatagttata attatgttta tgactcaaat ggatatgcta aattaaaaga taatcataga
     1381 tatggtaggg taattagaga aacaccttat attgatgtag ttgcatctga tgttaaaaat
     1441 aaatccataa gattaagctt ggtttgtggt attcattcat atgctccatg tgccaatttt
     1501 ataaaatttg caaaaaaacc tgttaaaatt tatttttata atcaacctca aggagatttt
     1561 atagataatg taatatttga aattaatgat ggaaacaaaa gtttgtactt gttagataag
     1621 tataaaacat tttttcttat tgaaaacagt gtttgtatcg tattaattat tttatattta
     1681 aaatttaatt tgcttttata taggacttac ttcaatgagt tggaatagtt ttggtaattt
     1741 tatgagcgca cgctcatccg cgttagcaga atttggaaat atggttgcta atttagtttc
     1801 tgcaaaaaat gagaaagata tctcgaaacg taatgaatat tacaaacaag ctggttatag
     1861 tgcattatta gcatttggta atttggctag taatattgca ccaggtagta cgtcatcgca
     1921 tattgtaaac ggaacaaatg cctctgtgat tgcaagccgt ctctctggaa atatatcttc
     1981 agctattcag gagcataaag atggtaaagt taatatcaac cgttttcaaa atattttagc
     2041 ggatttatat tcattgggag ggttaggaag tacattaata gagaagaatg gaaatatgca
     2101 gagttggggg attccattag caattgctgg agatataatt gcagcaacgg ctattgccac
     2161 aggagatact ggtacgatat ctacagagga attttataat tttgacaact ggaaaggttt
     2221 tgggtatgag ctatttgaag actggtctcg ttgggtatac gactggctgc ccgacggctg
     2281 gaatctgtgg aaagaattgg acagaaaccg ttcaggccaa taccac
//
LOCUS       DBBZXW010000170         2308 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.170, whole genome shotgun sequence.
ACCESSION   DBBZXW010000170 DBBZXW010000000
VERSION     DBBZXW010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.170"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            101..2245
                     /gene="fetA"
                     /locus_tag="ACJJD2_002067"
                     /gene_synonym="frpB"
     CDS             101..2245
                     /gene="fetA"
                     /locus_tag="ACJJD2_002067"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HGG7580524.1"
                     /translation="MNTPLFRLSLLSLTLAAGFAHAAENNAKVVLDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNNEKDYEAGKGFRNNFNGGK
                     TVPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFTVGSEDSRINIK
                     RQAPAYRETTQSNTNLAYTGKNLGFVEKLDANAYMLEKERYSADDSGTGYAGNVKGPN
                     HTRITTRGANFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSQFKIEDKEKATDEEKN
                     KNRENEKIAKAYRLTNPTKTDAGAYIEAIHEIDGFTLTGGLRYDRFKVKTHDGKTVSS
                     SNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTKAERARN
                     TEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHDSVAVREAVNAGYIKNHGYELGAS
                     YRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFQNPNLEIG
                     WRGRYVQKAVGSILVAGQKDRNGKLENVVRKGFGVNDIFANWKPLGKDTLNVNLSVNN
                     VFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          667 a          663 c          533 g          445 t
ORIGIN      
        1 tgttaatata aataaaaata attattaatt atttttctta tcctgccaaa tcttaacggt
       61 ttggcttaac ttcccttcat acactcaaga ggacgattga atgaataccc cattgttccg
      121 tctcagcctg ctctcgctta ccctagcggc aggttttgcc catgcggcag aaaataatgc
      181 caaggtcgta ctggataccg ttaccgtaaa aggcgaccgc caaggcagca aaatccgtac
      241 caacatcgtt acgcttcaac aaaaagacga aagcaccgca accgatatgc gcgaactctt
      301 aaaagaagag ccatccatcg atttcggcgg cggcaacggc acgtcccaat tcctgacgct
      361 gcgcggcatg ggtcagaact ctgtcgacat caaggtggac aacgcctatt ccgacagcca
      421 aatcctttac caccaaggca gatttattgt cgatcccgct ttggttaaag tcgtttccgt
      481 acaaaaaggc gcgggttctg cctctgccgg tatcggcgca accaacggcg cgattatcgc
      541 caaaaccgtc gatgcccaag acctgctcaa aggcttggat aaaaactggg gcgtgcgcct
      601 caacagcggc ttcgccagca acgaaggcgt aagctacggc gcaagcgtat tcggaaaaga
      661 gggcaacttc gacggcttgt tctcttacaa ccgcaacaat gaaaaagatt acgaagcagg
      721 taaaggcttc cgtaataatt tcaacggcgg caaaaccgta ccgtacagcg cgctggacaa
      781 acgcagctac ctcgccaaaa tcggaacaac cttcggcgac ggcgaccacc gcatcgtgtt
      841 gagccatatg aaagaccaac accgaggcat ccgcactgtg cgtgaagaat ttaccgtcgg
      901 cagcgaagat tcacggataa atattaaacg ccaagcccct gcttaccgcg aaaccacaca
      961 atccaacacc aatttggcgt acacgggtaa aaacctgggc tttgtcgaaa aactggatgc
     1021 caacgcctat atgttggaaa aagaacgcta ttccgccgat gacagcggca ccggctacgc
     1081 aggcaatgta aaaggcccca accatacccg aatcaccact cgtggtgcga acttcaactt
     1141 cgacagccgc cttgccgaac aaaccctgct gaaatacggt atcaactacc gccatcagga
     1201 aatcaaaccg caagcgtttt tgaattcaca atttaaaatt gaagataaag aaaaagcaac
     1261 tgatgaagag aaaaataaga accgtgaaaa tgaaaaaatt gccaaagcct accgtctgac
     1321 caacccgacc aaaaccgatg ccggcgcgta tatcgaagcc attcacgaga ttgacggctt
     1381 taccctgacc ggcgggctgc gttacgaccg cttcaaggtg aaaacccacg acggcaaaac
     1441 cgtttcaagc agcaacctta acccgagttt cggcgtgatt tggcagccgc acgaacactg
     1501 gagcttcagc gcaagccaca actacgccag ccgcagcccg cgcctgtatg acgcgctgca
     1561 aacccacggc aaacgcggca tcatctcgat tgccgacggc accaaagccg aacgcgcgcg
     1621 caataccgaa atcggcttca actacaacga cggcacgttt gccgccaacg gcagctactt
     1681 ctggcagacc atcaaagacg cgcttgccaa tccgcaaaac cgccacgact ctgtcgccgt
     1741 ccgtgaagcc gtcaacgccg gctacatcaa aaaccacggt tacgaattgg gcgcgtccta
     1801 ccgcaccggc ggcttgactg ccaaagtcgg cgtaagccac agcaaaccgc gcttttacga
     1861 tacgcacaaa gacaagctgt tgagcgcgaa tcctgaattt ggcgcacaag tcggccgcac
     1921 ttggacggct tcccttgcct accgcttcca aaacccgaat ctggaaatcg gctggcgcgg
     1981 ccgttatgtt caaaaagccg tgggttcgat attggtggca ggtcaaaaag accgcaacgg
     2041 caaattggaa aacgttgtac gcaaaggttt cggtgtgaac gacatcttcg ccaactggaa
     2101 accgctgggc aaagacacgc tcaatgttaa tctttcggtt aacaacgtgt tcaacacgtt
     2161 ctactatccg cacagccaac gctggaccaa taccctgccg ggcgtgggac gtgatgtacg
     2221 cttgggcgtg aactacaagt tctaaaacgc acatcccgaa aaaatgccgt ctgaaagcct
     2281 ttcagacggc atctgttctg ataatttg
//
LOCUS       DBBZXW010000171         2251 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.171, whole genome shotgun sequence.
ACCESSION   DBBZXW010000171 DBBZXW010000000
VERSION     DBBZXW010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.171"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            205..699
                     /locus_tag="ACJJD2_002068"
     CDS             205..699
                     /locus_tag="ACJJD2_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580525.1"
                     /translation="MENRFAKIVKDIFSFTQFVSEAENKIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCDISHFLHFADWA
                     EADIPNQSRLYAEYWWEMEIFKMSVLEDWERSGKPLDWEKWQRQYRSEAFELVKKLNR
                     SKQE"
     gene            819..1952
                     /locus_tag="ACJJD2_002069"
     CDS             819..1952
                     /locus_tag="ACJJD2_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580526.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESIRTEENLAETVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGEEVWLDYHIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLEDLEKEVSRYAEAAARRSGGRRDLSH"
     gene            complement(2039..>2251)
                     /locus_tag="ACJJD2_002070"
     CDS             complement(2039..>2251)
                     /locus_tag="ACJJD2_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580527.1"
                     /translation="RGDTYGGWRYLANLGDRYADDAAAIVGKDANLNGLNLWMKKGVE
                     NLWDDTVGKKIRLMCISVFWIVVFNL"
BASE COUNT          661 a          434 c          568 g          588 t
ORIGIN      
        1 gttatcagct cgacagaacc tgtattttat tcaaaataac aaattatcaa acaaagctct
       61 gattaaaaac ccaacaatca aaatgccgtc tgaagcggta ttcggctttc agacggcatt
      121 ttctccgatt agcacaggat gccggggctt gccggcttga ttttgccgaa attgttggca
      181 cgcaattggg aggggcggca acctatggaa aatagatttg caaaaatcgt taaggatatt
      241 tttagtttta cccaatttgt ttccgaagcg gaaaataaaa ttcctaacca atcctctcgt
      301 tattacgatt gctggtggga attggaaatc ttgaatgctt ccgcattgga agattgggaa
      361 atatcgggaa agcctgaaaa atgggagaaa tggacagaaa aatatcagac cgaagcgtta
      421 cagtcagtca agcatctatt tgccgaagaa gttcctgaaa ataatatagt ttgcgatatt
      481 tctcattttt tgcattttgc cgattgggca gaagccgaca ttcccaatca atcacgttta
      541 tatgccgaat attggtggga aatggaaatt ttcaaaatgt cggttttaga agattgggaa
      601 cgctcgggaa aaccgttaga ttgggaaaaa tggcaaaggc aatatcgatc tgaagcattt
      661 gaattagtta aaaaattgaa ccgaagcaaa caagagtaac aagccgcagc ctgcataggg
      721 gtttttaaag tacggcagca accgtagatt aaattaaaaa tcaaacaatc aaagctcgtc
      781 tgatataatc gatatattct gttaaacgaa aaataaatat gtttaaaaaa ttcaaaccgg
      841 tattgttgtc attttttgca cttgtatttg ccttttggct gggaacgggt attgcctatg
      901 agattaatcc gcgttggttt ttgagcgata cggcaactga aatacctgaa aatccgaatg
      961 cttttgtggc gaaacttgcc cgcctgttcc gaaatgccga cagggcggtt gtcatcgtga
     1021 aggaatcgat aaggacggag gaaaatcttg ccgaaactgt ggatgacggt ccgttgcagt
     1081 cggagaagga ttatcttgca ctcgctatcc ggctcagtcg tttgaaagaa aaggcgaaat
     1141 ggtttcacgt aacggagcag gaacatgggg aagaggtttg gctggattac catatcggcg
     1201 agggcggttt ggttgcggtt tcgcttttgc aacgctcgcc ggaagcgttt gttaatgccg
     1261 aatatctgta tcggaacgat cgtccgtttt ctgtaaatgt gtacggcgga acggctcacg
     1321 gagaaaatta tgaaacgaca ggagaatatc gggttgtttg gcaaccggac ggttcggtat
     1381 ttgatgcgtc ggggcgcggg aaaatcgggg aagatgttta tgagcattgt ctcgggtgtt
     1441 atcagatggc ccaggtatat ttggcgaaat atcgggatgt cgcgaatgat gagcagaagg
     1501 tttgggactt ccgcgaagag agcaaccgga ttgcgtcgga ctcgcgcgat tctgtgtttt
     1561 atcagaatat gcgggaattg atgccccggg ggatgaaggc gaacagtctt gtggtcggct
     1621 atgatgcgga cggtctgccg caaaaagtct attggagttt cgacaatgga aaaaaacgcc
     1681 agagtttcga atattatttg aaaaacggaa atctttttat tgcacaatct tcgacggtag
     1741 cattgaaagc ggatggcgta acggcggata tgcagaccta tcatgcgcaa cagacgtggt
     1801 atttggatgg cgggcggatt atccgcgaag agaaacaggg agacagactg cctgattttc
     1861 ctttgaactt ggaagatttg gaaaaagagg tgagccgtta tgcagaggct gcggcgagac
     1921 gttcgggcgg caggcgcgac ctttctcact gaacgcaaat gccgtctgaa accggttttc
     1981 agacggcatt ggagagtcaa acgctttttg caatgccgta tatgccgaat ccgattcgct
     2041 acaaattgaa aaccacaatc caaaaaacgg aaatacacat taaacggatc tttttaccga
     2101 ccgtatcatc ccataggttt tccacacctt ttttcatcca taaattcaaa ccatttaagt
     2161 ttgcatcctt accgacaatt gcagcagcat catccgcata acggtcaccc aaattagcca
     2221 aataacgcca accgccatag gtatcgccac g
//
LOCUS       DBBZXW010000172         2223 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.172, whole genome shotgun sequence.
ACCESSION   DBBZXW010000172 DBBZXW010000000
VERSION     DBBZXW010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.172"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="ACJJD2_002071"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="ACJJD2_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HGG7580528.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          568 a          628 c          583 g          444 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgagccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgatacg ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaaca
      481 aaatcgacaa gccgtccgct cgtccgagct gggtcatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttacgct tcagggttga
      601 gcggtttcgc caaattggaa gaaaccgacg agagcaacga catgcgtccg ctgttcgata
      661 ctatcttaaa atatacgcct gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg tatcggtcgt atcttgaacg
      781 gacgcatcaa acccggccaa accgttgccg tcatgaacca cgatcagcaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gtttggaacg cgtgccgctt gaagaagccg
      901 aagccggcga catcgtgatt atttccggta tcgaagacat cggcatcggc gtaaccatca
      961 ctgataaaga taaccccaaa ggcctgccga tgttgagcgt ggacgaaccg acgctgacca
     1021 tggactttat ggttaacacc agcccgttgg cgggcacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 ataccgccga tgccgacgtg ttccgcgtat ccgggcgcgg cgagctgcac ctgaccattt
     1201 tgctggaaaa catgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cgtatgaaaa cctgaccgtg gacgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga cggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggcttcca aggcgaattt atgaccctga cgcgcggggt cgggctgatg agccacgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcctggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggca gtcgcttacg ccttgtggaa tctggaagac cgcggccgta
     1621 tgttcgtatc gcccaacgac aaaatctacg aaggtatgat tatcggcatc cacagtcgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgtgccagcg
     1741 gtaccgacga agccgttcgc ctgaccacgc cgattaagct gacgctggaa ggtgcggtcg
     1801 agtttatcga cgatgatgag ctggtagaaa tcacgccgca atccatccgt ctgcgcaagc
     1861 gttacttgag cgaattggaa cgccgccgcc atttcaaaaa gctagattga tgtttactgg
     1921 attaatgttt aaatgatacg cgatgccgtc tgaaaaattt cagacggcat tttttattcg
     1981 gacgggcttt gcggcttctt gaagctgttt cagacggcgt ttttcctacc caatcaagaa
     2041 actgccgcca tttttccagc ggcatatcgc cccgtcgcgt ttcggtatcg ggttcggctt
     2101 cccggcagca tgtcgaacaa tgccgtttga aggaatacgc cttttgagtc cttacaagct
     2161 taggaagagg atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagatagt
     2221 aca
//
LOCUS       DBBZXW010000173         2222 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.173, whole genome shotgun sequence.
ACCESSION   DBBZXW010000173 DBBZXW010000000
VERSION     DBBZXW010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.173"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            142..2022
                     /locus_tag="ACJJD2_002072"
     CDS             142..2022
                     /locus_tag="ACJJD2_002072"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease catalytic domain-containing
                     protein"
                     /protein_id="HGG7580529.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELGKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLPLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPS
                     LAVKPSDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDSK
                     FNVGAPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVALAGKTAGN
                     AV"
     gene            2012..>2222
                     /locus_tag="ACJJD2_002073"
     CDS             2012..>2222
                     /locus_tag="ACJJD2_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilS"
                     /protein_id="HGG7580530.1"
                     /translation="MPSEARYGKLRQKQKPESHHSHSRESGFLGFRCFSVSMNFQAAV
                     PDKYPQSKIPSFPRRWESRFIRTETD"
BASE COUNT          603 a          676 c          519 g          424 t
ORIGIN      
        1 aacgctgtac tggtttttgt taatccacta taacgcaagc accgcaaaga cgcgccaacc
       61 ctctcccaac cttttttcag acggcatttt cggtaatctg ctaaaatcgc ccgcttgagt
      121 ttccacagaa aaatccgaaa aatgaatatt ttttacgaag agtccggcca attcaaaatc
      181 gccgccatca tccaaaaaaa cgatgccacc taccaagtcg ataccccaca cggcaaacgc
      241 accaaagtga aggcgaacaa cgtctttgcc gagtttgacg gcgatatggc ggcgtttttg
      301 gaaaacgcgc aggcacaggc ggcggacatc gacaccgatt tattgtggga agtatgcggc
      361 gaagaggaat ttaccgccga agccatcgcc gaagaatatt acggccatgc gccgaccaaa
      421 accgagctgg cggcaacttt gattgcgctt tacgccgcgc cgatgtattt ctacaaaaaa
      481 gccaaaggcg tgttcaaagc cgcgcccgaa gaaaccttaa aacaagcgct tgccgccatc
      541 gaacgcaaaa aacagcagga cgcacaaatc gacgcttggg cagaagcctt gaaacgcggc
      601 gagatgccgt ctgaaatcgc ggcggatttg aaaaccatcc tgcacgcgcc cgacaagcag
      661 tcgctgacct acaaagcctt taccaaagcc gccgacgcgc tgaaaacctc tgcctacgaa
      721 ctggggaaaa aaacgggcgg cattacgtcc attccccaat acctgcaaga cgggtttgaa
      781 atcaaatact tccccaaagg aacaggcttt cccgaccttc cccttcccga aatgcccgac
      841 ctgcccaaag ccgatgttac cgccttttcc attgacgacg aatcgaccac cgaagtggac
      901 gatgccttga gcctgaccga cttgggcaac ggcacgaagc gcgtcggtat ccacatcgcc
      961 gcgccgtcgc ttgccgttaa accgagcgac aaaatggaaa aaaacatcat ggaacgcttg
     1021 agtacggttt atttccccgg cggcaaaatc acgatgctgc ccgaaaactg gattgccgcg
     1081 ttcagccttg atgcaggcgc acaccgccct gccgtcagca tttatttcga tgtggacagc
     1141 aaattcaacg tcggcgcgcc gacctgcaaa atcgaagcgg tcaacatctc cgaaaacctg
     1201 cgtatccaag ccatcgaacc gcatttcaac gccgaagcgg gcttggacga agcgggcgaa
     1261 atgatgttcg cccaccatca agacctgatt tggttttatc aattcgccat caccctgcaa
     1321 aaagcgcgcg gcaaatacga gcccaaccgt gcgccgcaat acgattacag catcgaattg
     1381 gataaagaag acaacgtatc cgtcgtccgc cgcgaacgcg gctcacccat cgatacgctg
     1441 gtcagcgaga tgatgattct tgccaacagc acttgggcac aaatgctcca tgacaacgac
     1501 ctgcccggcc tcttccgcgt ccaacccacc ggaaaagtac gcatgagcac caaatccgag
     1561 ccgcatatcg gcatgggcgt gcagcattac ggctggttta cctcgccgct gcgccgcgcc
     1621 gccgactaca tcaaccaaaa gcagctgatc agcctgatag acgacactgc cgagccgctg
     1681 tatcaaaaca gcgatgccga gcttttcgcc gcactgcgcg actttgatgc cgcctatacc
     1741 gcctacgccg atttccaacg gcagatggaa gcctactgga gccttgtgta cctgcaacag
     1801 caaggtacaa gcgagctgac cgcgaccatc ctcaaagaag acctcgtccg catcgaaggc
     1861 ctgccgctgg tcacgcgcgc gaccggtatt ccgtttgacg cgctgcccaa atcacaggca
     1921 ttgttcaaaa tcaccgaatt agatgccgag aagcagtttg tctcgctcaa ctacatcaag
     1981 gcagtcgcac tcgcaggcaa aacggcaggc aatgccgtct gaagcccgat acggcaaact
     2041 ccggcaaaaa cagaaacctg aatctcatca ttcccacagt cgggaatccg gttttttggg
     2101 tttccgttgt ttttccgttt caatgaactt ccaagccgcc gttcccgata aatacccgca
     2161 atctaaaatc ccgtcattcc cacgcagatg ggaatctagg tttatccgca cagaaactga
     2221 ta
//
LOCUS       DBBZXW010000174         2193 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.174, whole genome shotgun sequence.
ACCESSION   DBBZXW010000174 DBBZXW010000000
VERSION     DBBZXW010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.174"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            30..515
                     /locus_tag="ACJJD2_002074"
     CDS             30..515
                     /locus_tag="ACJJD2_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580531.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDALAFVFGRTGLLVSV
                     SDGGFGWRGGWDGVVWFVYGVFAFLNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAAAVAWIFELLLGSGALGGLRGEAVLEYAFAVWLVAMLTLPKRLTRAPVQPVVFHRK
                     K"
     gene            611..1234
                     /gene="rsmG"
                     /locus_tag="ACJJD2_002075"
     CDS             611..1234
                     /gene="rsmG"
                     /locus_tag="ACJJD2_002075"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HGG7580532.1"
                     /translation="MERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQEEIGRLPQDVCVEKVQRLDVPGLEAERHIVILSKR"
     gene            1333..2106
                     /locus_tag="ACJJD2_002076"
     CDS             1333..2106
                     /locus_tag="ACJJD2_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HGG7580533.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVKSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGAKAYLALADELAARVSGK"
BASE COUNT          422 a          503 c          761 g          507 t
ORIGIN      
        1 tcggtctgct tcggaagagg gggacggcga tgtttgtgaa cgagaaagat ccttatgcgg
       61 ctctgtttgc gggactggtg tttttgacgc tgccgtttgc gttggcggtg catgatgcct
      121 tggcatttgt gttcggacgg acggggctgc tggtgtcggt gtcggacggc ggattcggct
      181 ggcgaggagg ctgggacggc gtggtgtggt ttgtgtatgg cgtgtttgcg tttttgaacc
      241 tggtcgtgtc ggcgggcctg acgaaactgg cgtacaaaaa gatgatgcgg cggcattccc
      301 gttacgcgct gtttctgtcg ggcgtggcgg cttgcgcggc tgctgcggtc gcgtggattt
      361 tcgagctgct gcttggcagt ggggctttgg gcgggctgcg tggggaggcg gtgttggaat
      421 atgcgtttgc cgtgtggctg gtggcgatgc tgacgctgcc caaacgcctg acgcgcgcgc
      481 cggtgcagcc ggtggtgttt cacaggaaaa aataggttgg aacgggaaat gccgtctgaa
      541 ccccgacacg cggtttcaga cggcatgttt ttccgttaac attacgcctg aacatggaca
      601 ggatagggat atggaacgca aagaacgcct gcgtgcaggc atcgccgcat tgggtttgga
      661 tatttccgca gcggcgcagg acaggctttt ggcctatgtg gatttgttga aaaagtggaa
      721 caaaacctac aatctgaccg ccctgcgcga cgaggaaaaa atgattgtcc atcatctttt
      781 ggacagcctg acgctgctgc cccatatcga gggtgtgcaa acgatgctgg atgtcggttc
      841 gggcggcggt cagcccggca ttccggcggc ggtgtgccgt ccggatgtgc agataaccct
      901 tttggatgcg aatacgaaga aaacggcttt tttacagcag gcggttatcg agttgggatt
      961 ggacaatgtg cgcgtggtat ccggacgcgt ggaggcggtt tcggacgtgc gtgccgatgt
     1021 ggttaccagc cgtgcgtttg cagaactggc ggattttgtg tcgtggacgg tgcatctgtt
     1081 gaaagacggc ggctactggg cggcgatgaa gggcgtgtat ccgcaggaag aaatcggccg
     1141 cctgccgcag gatgtgtgcg ttgaaaaagt ccaaaggctc gacgtgccgg gcttggaggc
     1201 ggaacgccat atcgttatcc tgagcaagcg ttgagcgcgc ttcagacggc atgaatacct
     1261 tttttgtgcg gataaaggta aaattccgca ctgtttttct tttttcaaca tcagacggga
     1321 cacgggcggg acatgagtgc gaacatcctt gccatcgcca atcagaaggg cggtgtgggc
     1381 aaaacgacga cgacggtaaa tttggcggct tcgctggcat cgcgcggcaa acgcgtgctg
     1441 gtggtcgatt tggatccgca gggcaatgcg acgacaggca gcggcatcga caaggcgggt
     1501 ttgcagtccg gcgtttatca ggtcttattg ggcgatgcgg acgtgaaatc ggcggcggta
     1561 cgcagcaaag agggcggata cgctgtgttg ggtgcgaacc gcgcgctggc cggcgcggaa
     1621 atcgagctgg tgcaggaaat cgcccgggaa gtgcgtttga aaaacgcgct caaggcagtg
     1681 gcggaagatt acgactttat cctgatcgac tgtccgcctt cgctgacgct gttgacgctt
     1741 aacggcttgg tggcggcggg cggcgtgatt gtgccgatgt tgtgcgaata ttacgcgctg
     1801 gaagggattt ccgatttgat tgcgaccgtg cgcaaaatcc gtcaggcggt caatcccgat
     1861 ttggacatca cgggcatcgt gcgcacgatg tacgacagcc gcagcaggct ggttgccgaa
     1921 gtcagcgaac agttgcgcag ccatttcggg gatttgcttt ttgaaaccgc catcccgcgc
     1981 aatatccgcc ttgcagaagc gccgagccac ggtatgccgg ttatggctta tgatgcgcag
     2041 gcaaagggtg ccaaggcgta tcttgccttg gcggacgagc tggcggcgag ggtgtcgggg
     2101 aaataggtca atccaaatcg ggctgcccgt gcctttatgc tgtttggccg ggtgcgttaa
     2161 tatggcggat taaaataaaa atacttatat cgt
//
LOCUS       DBBZXW010000175         2053 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.175, whole genome shotgun sequence.
ACCESSION   DBBZXW010000175 DBBZXW010000000
VERSION     DBBZXW010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.175"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            2..2014
                     /gene="rep"
                     /locus_tag="ACJJD2_002077"
     CDS             2..2014
                     /gene="rep"
                     /locus_tag="ACJJD2_002077"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HGG7580534.1"
                     /translation="MKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNVG
                     YLPHTVAAITFTNKAAAEMQERVAEMLPKSQTRGLTICTFHSLGMKILREEANHIGYK
                     KNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQQ
                     TARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNT
                     CQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVVKLEQNYRS
                     TARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIIKQKLI
                     GGDKTQYADFAVLYRGKHQARIFEEALRGVRIPYRLSGGQSFFDKAEIKDVLSYVRLL
                     ANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQTEEALATLNNTNRQ
                     HLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEIKWRNVGDLV
                     SWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVG
                     CEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRFI
                     DEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDSMKKGGPED"
BASE COUNT          591 a          567 c          525 g          370 t
ORIGIN      
        1 gatgaaactc aatccccaac agctcgaagc cgtccgttac ctcggcggcc ccctgctcgt
       61 ccttgccggt gcaggcagcg gcaaaaccgg cgtaattact caaaaaatta agcatttgat
      121 tgtcaatgtc ggctatctgc cgcataccgt cgccgcaatt acctttacca acaaagccgc
      181 tgcggaaatg caggagcgcg tcgccgaaat gctgcccaag tcgcaaacgc gcgggctgac
      241 aatttgcacg ttccattctt tgggcatgaa gattttgcgc gaagaggcga accatatcgg
      301 ttacaaaaaa aacttttcca tcctcgattc caccgacagc gcgaaaatca tcggcgaact
      361 tttgggcggt acgggcaaag aagccgtatt caaggcgcag caccagattt ccttgtggaa
      421 aaacgattta aaaacgcctg aagatgtcgt tcagacggcc tctaatgcgt gggaacaaca
      481 aaccgcacgc gtgtatgcga gctatcagga aaccttacaa agctatcagg cagtggactt
      541 cgatgactta atccgcctgc ctgccgtgct gttgcagcaa aacagcgaag tgcgcaacaa
      601 atggcagcgg cggctgcgtt atctgctggt tgacgaatgc caagatacga atacctgcca
      661 atttgcgctg atgaaactct tgaccggtgc ggaaggtatg tttaccgccg tcggcgacga
      721 cgaccagtcc atctacgcgt ggcgcggtgc gaatatggaa aacctgcgca aaatgcagga
      781 aaactatccg cagatgaagg tcgtcaaact ggagcaaaac taccgctcca ccgcgcggat
      841 tcttaaaatc gccaacaaag tcatcgaaaa caaccccaag ctgtttacca aaaaactttg
      901 gtcgcaattg ggcgaaggcg agccggtcaa agtcgttgcc tgccaaaacg agcaacacga
      961 agccgactgg gtcgtcagcc aaatcatcaa acaaaaactc atcggcggcg acaaaaccca
     1021 atacgccgat ttcgccgtgt tataccgcgg aaagcatcag gcgaggattt tcgaggaagc
     1081 attgcgcggc gtgcgcatcc cctaccggct ctccggcgga caaagctttt tcgacaaagc
     1141 cgaaatcaaa gacgtgttgt cttatgtgcg gctgcttgcc aaccccaacg acgatcccgc
     1201 ctttctgcgc gccgtaacca cgcccaaacg cggcatcggc gatgtaacgc tgggcaagct
     1261 caacgcctac gcgcacgaac acgaatgcag cctgtatgaa gccgcgcaaa ccgaagaagc
     1321 ccttgccacg ctgaacaata ccaaccgcca acacctgcaa gcctttatgg atatgttcgg
     1381 cagctaccgc gccaaagccg aaacaggcga agcaggcgag ttcatcaaca gcctgctcga
     1441 agaaatcgac tatgaaaacc acctgcttgc cagtgaagaa ggcaaagctg gcgaaatcaa
     1501 atggcgcaac gtcggcgatt tggtatcatg gtttgcgcga aaaggcgggg aagacggcaa
     1561 aaacatcatc gaactcgccc aaaccgtcgc cttgatgacg cttttggaag gaaaagacga
     1621 agaagaaacc gatgccgtct cgctatccac gctacacgcc gccaaaggtt tggagtatcc
     1681 ctatgttttc cttgtcggtt gcgaagaagg tgttttgccg cacaacgaca gcatcgaaga
     1741 aggcaacgtc gaagaagaac gccgcctgat gtacgtcggc atcacccgcg ccaaacgcca
     1801 gcttacgctg acccactgcg tcaaacgcaa aaaacaaggc atatggcagt tccccgaacc
     1861 cagccgattc atagacgaaa tgccgcagga agatttgaaa atcctggggc gcaaaggcgg
     1921 cgaaccgatt gtcagcaaag aagaaggcag acgcaacctt gccgatataa tcggaaggct
     1981 cgacagcatg aaaaaaggcg gtccggagga ttaaaccaag atagggaaac gaagccggag
     2041 acaatgtata gtg
//
LOCUS       DBBZXW010000176         2029 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.176, whole genome shotgun sequence.
ACCESSION   DBBZXW010000176 DBBZXW010000000
VERSION     DBBZXW010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.176"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..219)
                     /locus_tag="ACJJD2_002078"
     CDS             complement(<1..219)
                     /locus_tag="ACJJD2_002078"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580535.1"
                     /translation="MSNDALPFFAGGCFYIFFNSTDCILEDVFRYGAGKAFSVKGLSD
                     RAVFYSGLTKTSTALPRLAVLFVLSAASP"
     gene            324..1781
                     /locus_tag="ACJJD2_002079"
     CDS             324..1781
                     /locus_tag="ACJJD2_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7580536.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGATTGFLLLLLVPKLNKMLEGTD"
BASE COUNT          459 a          608 c          470 g          492 t
ORIGIN      
        1 cggcgaagcc gcagacagta caaatagtac ggcaaggcga ggcaacgccg tactggtttt
       61 tgttaatcca ctataaaaaa ccgccctatc ggataagccc ttaacagaaa aggctttacc
      121 cgcgccgtat cggaacacat cctctaaaat acaatccgtt gaattgaaaa aaatataaaa
      181 acatccgccc gcgaaaaacg gcagcgcgtc gtttgacaaa gaatgaaaat atcggttaaa
      241 aaccgatttt catacaaaaa acaccgctgc cgtccgcatc cgtttcagac ggtattgaga
      301 gaaaatcttt taggagaacc tttatgtccc ggcatcccgc ccccaccgga gaaaaaacat
      361 tcttcggcca ccccttccag ctttccaccc tcttccatat cgaattgtgg gaacgttttt
      421 cattttacgg aatgcagggc atcctgctga tttacctcta ctacaccgcc gacaaaggcg
      481 gcttgggcat agacaaaacc ctcgccggcg gcattgtcgg cgcatacagc ggcagcgtgt
      541 acctgtccac cattttgggg gcgtggtttg ccgaccgagt atggggtgcg gaaaaaaccc
      601 tcttcctctc gggcatcgtc gtgatgctcg gacacatcgt ccttgccgcc gccccgggcc
      661 tgtacggtct tttaatcggg ctgatattca tcgcattggg cagcggcggt gtgaaatcta
      721 cggccagttc tatggtgggc gcattatacg aacaggacga aatgcgcccg ctgcgcgatg
      781 cgggattttc cattttctac atcgccatca acatcggcgg cttcctgggc ccgctgctga
      841 ccggcctgct gcaggaaaac atcggtttcc attatggttt cggcgcggcg gcggtcggta
      901 tggcattcgg cttgtggcgt tattccttgg gacgtaaaaa cctgccccac cccaccgtcc
      961 cccatccgct ttcaaaagga cagggcaaaa ctgcggccgc cgtcggcatc accctcatcg
     1021 ccgcacttgc aaccgccatc aaaaccgggc ttgtcaacct cgacaatttc tccggcatcc
     1081 tcttatctac cgtcatcctt gccgtcattg cctatttcgc ccgcctgctg accaaccccc
     1141 gcgtcagttc cgacaacaaa cggcacatca tcgcctacat cccgcttttc ctgaccatct
     1201 gtatgttttg ggccgtctgg tttcagattt acaccgtggc aaccgtctat ttcgacgaaa
     1261 ccgtcaaccg caccatcggt tcgtttaccg tgcccgtcgc ctggaaagat tccatgcaaa
     1321 gcctgtgggt catcctgttt tccggactga tggcggcaat gtggacaaaa atggggcgca
     1381 aacagcccaa aaccccgctg aaattcgcta tggcggtatt tgttaccggc gcgtcgtttt
     1441 tgggattcgt cccctttatt tccgccggca cgccgatgcc tattgcggtt ttcgcactga
     1501 ttgtccttgc catcacgata ggcgaactga tgatttcccc gattgcgctg tccatctcca
     1561 ccaaaatcgc accgccttta ttcaaaaccc aaatggtcgc ccttaatttc cttgcctttt
     1621 cattaggctt cactttgggc ggcgtattgt ttgagaaagg ctatcaggcg ggcgacgaaa
     1681 tcggcttcta ccggctgctg ttctacatcg gcgcaaccac aggcttcctg ctgctcctgc
     1741 tcgtccccaa attgaacaaa atgctcgaag gcacagacta agtcccgccc cgatgcgccg
     1801 atgccgtctg aacccttcag acggcatttt tccgcataat gaaaccaaac cgtttccacc
     1861 cgacaggaca ggctcccccc aaccggaagg cagcctgccg attgtcattt gaatatctga
     1921 ctgattccgt ctgtttgcaa gggaaatagc cgtttatttc cgcttgggcg gaaaccggtt
     1981 ctattgagta aaaggcattt tatccgacta aattagtgct gcatcaacg
//
LOCUS       DBBZXW010000177         2018 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.177, whole genome shotgun sequence.
ACCESSION   DBBZXW010000177 DBBZXW010000000
VERSION     DBBZXW010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.177"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..768)
                     /locus_tag="ACJJD2_002080"
     CDS             complement(<1..768)
                     /locus_tag="ACJJD2_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HGG7580537.1"
                     /translation="MILTPPDTPLFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRDRGWHGVVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTFAARYREIYAVGVSLGGNALAKYLGEQGKKALPQAAA
                     VISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKAKSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAV"
     gene            complement(901..>2018)
                     /gene="murJ"
                     /locus_tag="ACJJD2_002081"
     CDS             complement(901..>2018)
                     /gene="murJ"
                     /locus_tag="ACJJD2_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HGG7580538.1"
                     /translation="SLSSFVGSVLNSYHKFGIPAFTPTFLNVSFIVFALFFVPYFDPP
                     VTALAWAVFVGGILQLGFQLPWLAKLGFLKLPKLNFKDAAVNRVMKQMAPAILGVSVA
                     QVSLVINTIFASYLQSGSVSWMYYADRMMELPGGVLGAALGTILLPTLSKHSANQDTE
                     QFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVATLFMYREFTLFDAQMTQHALIAYSF
                     GLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLICTQLMNLAFIGPLKHVGLSLAIGLG
                     ACINAGLLFYLLRKHGIYRPGKGWAAFLAKMLLALAVMGGGLYAAQIWLPFDWTHTGG
                     MQKAARLFILIVIGGCLYFASLAALGFRPRHFKRVES"
BASE COUNT          481 a          539 c          617 g          381 t
ORIGIN      
        1 gacggcattg agcaggagca gcggtttggc aacgtgtttg agcagcggtt tgcaggaagt
       61 ttggcggtag tagtcgtgcc ggtcggcaaa gccgtgcagc ggtgcggtga agcggtcgtc
      121 aaactcgccc agtgttttgc accctgcggc aaatgccgtc tgaaaacctt ggagcgattt
      181 tgctttgggt atcagggtgc ggaggaagta gcgcgtgtag agcagccgcg tgatgccgct
      241 gtcgaagcgt ctgcctgccg cctctgcatc gacgggggcg gagatgacgg cagcggcttg
      301 cggcaatgcc tttttgccct gttcgcccaa atattttgcc agcgcgttgc cgcccagcga
      361 tacgccgacg gcgtatattt cacggtaacg cgcggcgaac gtgtccaaag taaaggcgat
      421 ttcggcggta tcgcccaagt ggtagaacac cggagcggtg ttggcaatgc cgccgcagct
      481 gcggaaatgg acgactacgc cgtgccaacc ccgatcgcgt accgcaagca tcagttcgac
      541 cgcgtaatgg ctgcggctgc ttccttccaa accgtgaaac agcacgacca gcggcgcatc
      601 gggcgaaatg ccgtctgaaa agtcgtaggc gactttggtt ttacccgtgc tgtcgggaag
      661 cagctcgcgg cggtatgcag gtgcggggcg ttgcaggaat ttggcggcaa tcgtgtcggc
      721 attgccgttg cggaggaaaa ggggcgtgtc cggcggtgtc aaaatcataa ggtatcggtt
      781 ttcttgtttt cagacggcat tgatgatgcg gcagcccgtc cggccggtgc ggacgcgggg
      841 gatgcgcgcc cgaatatagg cgtggaaaaa gcgtttgccg aaaaaggata tcggcatcgg
      901 tcagctttcc acccgtttga aatggcgcgg acggaagccc agtgcagcca gtgatgcgaa
      961 atacaggcag cctccgatga caatcaggat gaagagccgg gcggcctttt gcattccgcc
     1021 ggtgtgtgtc cagtcgaacg gcagccagat ttgggcggca tacaggccgc ctcccatcac
     1081 ggcgagcgcg agcagcattt ttgccaagaa cgccgcccaa cccttgccgg gccggtaaat
     1141 accatgtttg cgcaacaggt aaaacaacaa tccggcattg atacacgcgc ccagaccgat
     1201 ggcaagcgaa agtccgacgt gtttcagtgg gccgataaag gcaaggttca tcaactgcgt
     1261 gcaaatgagc gtgaagatgg cgattttgac gggcgttttg atgttttgcc gcgcataaaa
     1321 gccgggcgcc aacactttaa tcatgattaa accgattaaa ccgaaagaat aggcaatcag
     1381 cgcgtgttgc gtcatttgcg cgtcaaacag cgtgaattcg cggtacataa acagcgtcgc
     1441 caccagcggg aacgacaaca ccgccagtcc gaccgccgcc ggcagcgtca gcagcataca
     1501 caggcgcaaa ccccagtcga gcagggcgga aaactgttcc gtatcttggt ttgccgagtg
     1561 tttggacaaa gtcggcagca aaatcgtacc gagtgccgcc cccagcacgc cgccgggcag
     1621 ttccatcatg cggtcggcgt aatacatcca tgaaacgctg cccgattgca gataagacgc
     1681 gaaaatcgtg ttgatcacca aagaaacctg cgccacgctc acgcccaaaa tcgccggcgc
     1741 catctgtttc atcacgcggt tgaccgccgc atctttgaaa ttcagtttgg gcagtttcaa
     1801 aaagcccagt ttcgccagcc agggcagttg gaagccgagt tgcaaaatac cgccgacaaa
     1861 aaccgcccat gccagagcgg taacgggcgg atcgaaatac ggcacgaaaa acagcgcgaa
     1921 tacgataaac gacacgttca ggaatgtggg cgtaaacgcg ggaatgccga acttatgata
     1981 ggaattgagt accgagccga caaaagagga aagtgaaa
//
LOCUS       DBBZXW010000178         1985 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.178, whole genome shotgun sequence.
ACCESSION   DBBZXW010000178 DBBZXW010000000
VERSION     DBBZXW010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.178"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1401
                     /gene="pilC"
                     /locus_tag="ACJJD2_002082"
     CDS             <1..1401
                     /gene="pilC"
                     /locus_tag="ACJJD2_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7580539.1"
                     /translation="AKELRAFAEKGYVGDRYGVDGGFVLRQVERNGKDHVFMFGAMGF
                     GGRGAYALDLTKADGNDPTKASLFDVKDNGNNGNNRVELGYTVGTPQIGKTHNGKYAA
                     FLASGYATKEINSTENQTALYVYDLESNNGTPIATINVPDGKGGLSSPTLVDKDLDGT
                     VDIAYAGDRGGSMYRFDLSGNNPTSWSARAIFSGNKPITSAPAISQLKDKRVVIFGTG
                     SDLSEDDVLSTSEQYIYGIFDDDMVANNVNVKLSGLGGGLLEQHLTQEDKTLFLTDYK
                     RSDGSGDKGWVVKLEAGQRVTVKPTVVLRTAFVTIHKYTGNDKCGAETAILGINTADG
                     GKLTKKSARPIVPDANKDVAQYSGHKKGTNGKSIPIGCMEKNGGTVCPNGYVYDKPVN
                     VRYLDEKKTDGFSTTADGDAGGSGIDPAGKRAGKNNRCFSQKGVRTLLMNDLDSLDIT
                     GPTCGMKRISWREVFF"
BASE COUNT          539 a          479 c          528 g          439 t
ORIGIN      
        1 gccaaagagc tgcgcgcctt tgccgaaaaa ggctatgtgg gcgaccgcta cggcgtggac
       61 ggcggctttg tcttgcgcca agtcgaacgg aatgggaaag accatgtgtt tatgttcggc
      121 gcgatgggct ttggcggcag aggcgcatac gccttggatt tgaccaaagc cgacggcaat
      181 gacccgacaa aagcctcttt gtttgatgta aaagataacg gcaataatgg caataatcgc
      241 gtggaattag gctacaccgt cggcacgccg caaatcggca aaacccacaa cggcaaatac
      301 gccgccttcc tcgcctccgg ttatgcgact aaagaaatta acagcacaga aaatcaaacc
      361 gcgctgtatg tgtatgattt ggaaagcaac aacggtacgc cgattgcaac aatcaacgta
      421 cccgacggca agggcgggct ttcgtccccc acgctggtgg ataaagattt ggacggcacg
      481 gttgatatcg cctatgccgg cgatcgcggc ggcagtatgt accgctttga tttaagcggc
      541 aacaacccga ccagttggtc tgcacgcgcc attttcagcg gcaacaaacc gattacttcc
      601 gcgcccgcca tttcccaact gaaagacaaa cgcgtggtta tcttcggcac gggcagtgat
      661 ttgagtgagg atgatgtact cagtacgagc gaacaatata tttacggtat cttcgacgac
      721 gatatggtgg cgaataacgt aaatgtaaaa ctcagcggtt tgggaggcgg gctgctcgag
      781 caacacctta ctcaggaaga taaaacctta ttcctgaccg attacaagcg atccgacggc
      841 tcgggcgata agggctgggt agtgaaattg gaagccggac agcgcgttac cgtcaaaccg
      901 accgtggtat tgcgtaccgc ctttgtaacc atccataaat atacgggtaa tgacaaatgc
      961 ggcgcggaaa ccgccatttt gggcatcaat accgccgacg gcggcaagct gacgaagaaa
     1021 agcgcgcgcc cgattgtgcc ggacgccaat aaggatgtcg cgcaatattc cggtcataag
     1081 aaaggcacca acggcaaatc catccctata ggttgtatgg aaaaaaacgg gggaaccgtc
     1141 tgcccgaacg gatatgttta cgacaaaccg gttaatgtgc gttatctgga tgaaaagaaa
     1201 acagacggat tttcaacaac ggcagacggt gatgcgggcg gcagcggtat agaccccgcc
     1261 ggcaagcgtg ccggcaaaaa caaccgctgc ttctcccaaa aaggggtgcg caccctgctg
     1321 atgaacgatt tggacagctt ggacattacc ggcccgacgt gcggtatgaa acgaatcagc
     1381 tggcgcgaag tcttcttctg atttgcacgc gaaaatgccg tccgaaaggt tttcggacgg
     1441 cattttttgc gtttttcggg aggggcgggt tcgtaaaagg cgggctatag ggtaggcttc
     1501 atctcgccaa tctcactgaa tccatcaatt tccacaattc aattaaatac cgtcaaaccg
     1561 atgccgtcat tcccgcgcag gcgggaatct agaccttaga acaacagcaa tattcaaagg
     1621 ttagctgaag ctttagagat tctggattcc cactttcgtg ggaatgacgg gatttgagat
     1681 tgcgacattt atcgggagca acagaaaccg ctctgccgtc attcccgcgc aggcgggaat
     1741 ctagacctta gaacaacagc aatattcaaa gattatctga aagtccggga ttctggattc
     1801 ccacttccgt gggaatgacg ggattagagt ttcaaaattt attctaaata gctgaaactc
     1861 aacgcactgg attcccgcct gcgcgggaat gacgaatttt aggtttctga ttttggtttt
     1921 ctgtttttgt aggaatgatg aaattttgag ttttaggaat ttaccggaaa aaacagaaac
     1981 cgctc
//
LOCUS       DBBZXW010000179         1941 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.179, whole genome shotgun sequence.
ACCESSION   DBBZXW010000179 DBBZXW010000000
VERSION     DBBZXW010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.179"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..217
                     /locus_tag="ACJJD2_002083"
     CDS             <1..217
                     /locus_tag="ACJJD2_002083"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580540.1"
                     /translation="SLHIENAAQANFQFASLVLALSHGERGLGCRLPLRFRQILTSLI
                     PRFSFAEAALSDDLLEHHRYTHLRNAV"
     gene            complement(228..551)
                     /locus_tag="ACJJD2_002084"
     CDS             complement(228..551)
                     /locus_tag="ACJJD2_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG7580541.1"
                     /translation="MDIVQLGPAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(631..1287)
                     /locus_tag="ACJJD2_002085"
     CDS             complement(631..1287)
                     /locus_tag="ACJJD2_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HGG7580542.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYAAALLAKLAGRV
                     VSDDIDAEQQKRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMAVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFDF
                     "
     gene            complement(1389..1892)
                     /locus_tag="ACJJD2_002086"
     CDS             complement(1389..1892)
                     /locus_tag="ACJJD2_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HGG7580543.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADEADWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGETVVVGDVNA
                     YPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEYLAQFDETDALYLGELAKILEKRF
                     EASRQAV"
BASE COUNT          513 a          663 c          387 g          378 t
ORIGIN      
        1 cagcctgcac attgaaaatg ccgcccaagc aaactttcag tttgccagcc tcgtcctagc
       61 cctctcccac ggggagaggg gattggggtg caggctgcct ttaaggttca ggcaaatttt
      121 aacttcgttg ataccgcgct ttagcttcgc agaagctgca ctttcagacg accttttgga
      181 acaccacagg tacacgcatt taaggaatgc cgtctgaaat gcctgcctca ataacgcatc
      241 atgttgccgt caatctcggc cgcccatgca tcgatgccgc cctgaaggtt gtacaggttt
      301 tcaaaacccg cgtccgccaa atacatcgcc gtatgcagac tgcggatacc gtgatggcaa
      361 tacaccacaa gcggcacatc atccggcagc tcgttctgcc gcagcggaat cagattcatc
      421 gggatatgca gcgcatttgg cagcgaacaa accgccgttt cttcatccgt acgcacgtcc
      481 aacaaacaaa acatccgccc ttcgtccatc cacgctttca attccgcggg cccaagttgc
      541 acaatatcca tcgcaccccc ccaaaaaaac caagcaaaat gccgtctgaa gccccaaacc
      601 cgctttcaga cggcatgacc tgtcaacatc ttaaaaatcg aaaccgccaa acggatcggc
      661 atccttatca tccaaatgcg ccaccaaagt atcgaacagc accttctctt caaacacatc
      721 gcccttgcgc gtaatcaaaa gcgcgcgctg aacaggcttg cggcctacga taaccgccat
      781 gcgtccgcca tctttcaact gttctttcaa cacttcaggc acaaggttta ccgcgccgcc
      841 gacataaacc gcatcaaacg gcgcgcctgc ggaaagttcg gtcagcccgt tgttttgcac
      901 ataatcaatg ttttccaaag acaagccgtc caaaaccgct ttggcgcgct tttgctgttc
      961 ggcatcgatg tcgtccgaaa ccacacgacc agccagtttc gccaacagcg cggccgcata
     1021 gcccgatccc gtgccgattt ccaaaaccgt atcgtttttc gtcagcttca agccctgcgc
     1081 cagccgcgcc acaactttcg gctcgagcat cttatgcccg ttggcaagcg gcagcgccat
     1141 atccgcatac gccaaaccct gcaagtcctc atcgacaaaa agctcgcgcg gaatctccgc
     1201 caaagcgtcc aaaacgtcaa aatccaatac atcccaagga cggatttgct gttcgaccat
     1261 attgaaccgc gctttttcaa aatccattta gtgctccgtc aaataattgt tccaacaata
     1321 gcaggcatta taaaaccaca ctcccgccgc gccaacttcg gcacgcgccg cccgcccctt
     1381 tccctcactc aaaccgcctg acgcgaagcc tcaaaccgct tctccaaaat cttcgccagc
     1441 tcgcccaaat acaaagcatc tgtctcatca aactgcgcca aatattcgct gtccgcgtcc
     1501 aacacgccga tacagcggcc gtctgaaaac agcggcacga caatctccga acgcgacaaa
     1561 gacgaacagg caatatggtc gggatacgcg ttgacatccc cgacgaccac cgtctctccc
     1621 ttcgcccaag cctgaccgca caccccgcga ccgaacggaa tccgcgtaca cgccaaaggc
     1681 ccctgaaacg gtgccaaaac caattcgtcc gaacgcgtat cgaccaaata aaaacccacc
     1741 caaaaccaac cgaacgcctc cttcaaaacc gccgccgtgt tcgccaaatt cgccacccaa
     1801 tccgcctcgt cagccaccac agactcaatc tgcggcaaca cctcccgata aagcgcggcc
     1861 ttgtccgaag ccgaaaaatg aagcgcgtgc atcacatctc ctatagttgc atacatatca
     1921 ggcggccatt ataaaacaac c
//
LOCUS       DBBZXW010000180         1929 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.180, whole genome shotgun sequence.
ACCESSION   DBBZXW010000180 DBBZXW010000000
VERSION     DBBZXW010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.180"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            212..1684
                     /gene="pyk"
                     /locus_tag="ACJJD2_002087"
     CDS             212..1684
                     /gene="pyk"
                     /locus_tag="ACJJD2_002087"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HGG7580544.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVTAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQAEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
BASE COUNT          497 a          555 c          516 g          361 t
ORIGIN      
        1 ccaaaaataa atttagccta agtcataaaa ccgtgtaatt ttgcaccaaa aaagacggtt
       61 tgcaggtaaa atatcaaact attaatttaa atcatatttt tacagaatat tccgccgcat
      121 tcatcaaatg gacatcaaac cggttccaaa tttctgtaat tttgcaacaa aataccgcaa
      181 aacacccgat tgagaccgaa aggactttca tatgaaccag acaagccgcg atctgacccg
      241 catcagccac aacaccaaaa tcgtcgccac cttggggccg ggcagcaaca acgtcgaact
      301 gttggaagac atgatccgcg tcggcggtct gaacgtcgtc cgcttcaact tcagccacgg
      361 cacgcccgaa ttccatcagg aaaacgcccg cattgtgcgc gaggcggcaa aacgcgccgg
      421 acaggaaatc gccatcattg ccgacctgca agggccgaaa atccgcgtgg gcaaaatcgc
      481 cggcggcggc atcgaattga acaaaggcga aacgctggta ctggatgccg cgctcgaagg
      541 cgaaggcacg cgcgaggcgg tcggtttgga ctaccgcgac ctgcccgacg acgttaccgc
      601 aggcgacgta ttgtggctgg acgacggcct gctgaccctg accgtggaat ccgtcgaagg
      661 cagcaggatt atcacaaggg tggaaaacag ccatgtcctg aaaagcaaca aaggcatcaa
      721 caaacgcggc ggcgggctgt ccgcaggcgc gttgaccgaa aaagacttcc gcgacctgaa
      781 aaccgcgatt gccatcggtt gcgactacct cgccatcagc tttgtgaaat ctgccgaaga
      841 tttgcacatc gcgcgcgcca aagtcgaaga agaaatgaag ggcagcactg ccgtgcgccc
      901 cggtttggtt tccaaaatcg aacgcgtaga agcgattgaa aaccttgatg aaatcatcct
      961 cgccggcgac ggcattatgg ttgcgcgcgg cgacttggcg gtcgaagtcg gacacgccgc
     1021 cgtccccgcc ctgcaaaaac ggatgatccg ccgcgcccgc gagttgcgcc gcttcagcat
     1081 tacggcgacg caaatgatgg aatcgatgat taccaacccc gtgccgaccc gcgcggaagt
     1141 cagcgatgtg gcaaacgcgg tattggacgg taccgatgcg gtgatgtgtt ccgccgaaac
     1201 cgccgtcggc gcgtatccgt ttgaaaccgt cagccaaatg gcaattatct gcgcggctgc
     1261 ggaaaaagag caggattcgc tcaacggcgt tgccgaacag gcggagtatc ccgaagcggt
     1321 cagcaccaac ctagcggttg ccggcggcgc ggtcagcgtg gcgcgcgcgg ttcacgccaa
     1381 agcgattgtc gccctgaccg aaagcggttc gaccgccttt gaaatcagcc gccacaacat
     1441 caccctgccg attttcgcgc tgaccccgag cgtttccgcc caacgccgta tggcgatgta
     1501 ccgcggcgtg cgcccgctga ttttggcaac cagtaccgac cacgacacgg cgttgaacga
     1561 agtcgaaacc atgctggtgg aacacaacat cctgcattcc ggcgaccaat acatcatcac
     1621 cagcggctcg caaatgcgcg aatccggttc gaccaatacg ctggaagtgc tgcgcgtcaa
     1681 ataatccgcc ctgagtggaa aatgccgtct gaagtcgatg cccgaggctt cagacggcat
     1741 tttttgcggc ggcgcggcgg ttcaggcaaa ctgaaaaaat tgtgcaaatc cggcaacatc
     1801 agataaaatt gagtacctat actaaagcga aacaaggcat ttccgactgc cttttttata
     1861 gtggattaaa tttaaaccag tacagcgttg cctcgccttg ccgtactatc tgtactgtct
     1921 gcggcttcg
//
LOCUS       DBBZXW010000181         1883 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.181, whole genome shotgun sequence.
ACCESSION   DBBZXW010000181 DBBZXW010000000
VERSION     DBBZXW010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.181"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(127..1437)
                     /locus_tag="ACJJD2_002088"
     CDS             complement(127..1437)
                     /locus_tag="ACJJD2_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HGG7580545.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKSLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPYVENGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLGAAETR
                     RLKTLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRALQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRRFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDCLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            1692..1883
                     /locus_tag="ACJJD2_002089"
                     /pseudo
     CDS             1692..1883
                     /locus_tag="ACJJD2_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213469.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          454 a          494 c          480 g          455 t
ORIGIN      
        1 ttaatccact ataccacgtt gtctttattg gctttatcaa taaacaggat aagacctgaa
       61 aaaaagccga tacgcctttt tggtgtaccg gctttgccat actgttctgc ttcagacagc
      121 attgcttcat tttgccttta atacttcttc gtccagcgat ttcaaccatt ccagcttttc
      181 gccgattttg atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagca
      241 gtcgggcata tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
      301 ttcgcgtccg tagcccaatt ccttcatcag cttggtcggg gcattgcgca ggtggacggg
      361 tacttcgtcg ctggcgtttt ctttgacgaa acggcgcatt tgattgtatg ccttgtagcc
      421 cgcgttggat ttcgcggcgg cggcaagata caataccgct tgcgccaaag ccagttcgcc
      481 ttcgggcgag cctaagcgtt cgaaggtggc ggcggcatcg ttggcgattt gcaaggcgcg
      541 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgaggtagcg
      601 cgggtcggtg ccgccgtcga gcatacggca gaaccaatac agcgcggcgt tcggatgcga
      661 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
      721 gaaacggcgg atttgcgccc cgagactgtc ggcgagaaat tcggcagtca gggttttcag
      781 acggcgcgtt tcagcggcgc ctaacagttg ttccaacaaa ttcaacaatc tgcgcgcatc
      841 accgtcggcg gtattcacga gtaatttttg cgcatccgtt tcaatcgtaa actcttggta
      901 ttcaggcaaa gccaatacct tggcaatcag ctttttcagg tcgtctgaag acaaggattg
      961 caaaacatac acctgcgcgc ggctcaacag cgcgggattc acttcaaacg acggattttc
     1021 cgtcgttgcg ccaataaagg tcagcaaacc gttttccaca taaggcaaaa acgcatcctg
     1081 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgccc tcccctgctg
     1141 caaagcgatt tcagccttgt cgattgcccc gcgtatgtct tttacgccgg aaaacacggc
     1201 ggaaacaggc agaaactggg cattgaaact ctgcgccaaa atccgcgcca acgtcgtctt
     1261 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttgccccctt ctaccgccac
     1321 gcgcaaagat ttaccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg
     1381 cggacgcaat cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataac
     1441 ggctccgtca acaggttttc aaacaatatg attatacggc agggaacggc ggcgtgccgc
     1501 atacggattc cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg
     1561 agagacttca cacaatatat ccggcacgga gaccgattcc gcaccggcat gacaataccc
     1621 aaatcagcgt ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca
     1681 ttgctttgtt gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata
     1741 ttcaagagat ggaatgggtg tctttatttt ctgatccgca aaaagacgat gatagtctta
     1801 taacccttaa agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag
     1861 tgaaaacttt agaaaattag aac
//
LOCUS       DBBZXW010000182         1881 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.182, whole genome shotgun sequence.
ACCESSION   DBBZXW010000182 DBBZXW010000000
VERSION     DBBZXW010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.182"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..747
                     /gene="mafB"
                     /locus_tag="ACJJD2_002090"
     CDS             <1..747
                     /gene="mafB"
                     /locus_tag="ACJJD2_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HGG7580546.1"
                     /translation="IKLNPTDTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            750..1067
                     /locus_tag="ACJJD2_002091"
     CDS             750..1067
                     /locus_tag="ACJJD2_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580547.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            1231..1877
                     /locus_tag="ACJJD2_002092"
                     /pseudo
     CDS             1231..1877
                     /locus_tag="ACJJD2_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
BASE COUNT          633 a          397 c          414 g          437 t
ORIGIN      
        1 atcaaactca atccgaccga cacccgcagc atccggcaac gcatatccga caattacagc
       61 aacctcggca gcaatttctc cgaccgcgcc gatgaagcca acagaaaaat gttcgagcac
      121 aatgccaagc tcgaccgctg gggcaacagc atggagttta tcaacggcgt cgccgccggc
      181 gcgctcaacc cctttatcag cgcgggcgaa gccgttgacc agtggatgca ggaaaacccc
      241 aatgccgccg aaaccgtcga agccctggtc aacgtcctgc cgtttgccaa agtcaaaaac
      301 ctgacaaagg cggcaaaacc ggggaaggct gcggttagtg gggatttctc agactcctac
      361 aagcataaca ctgcttcaag attatctcag tctgtagatg gagaaatgtt tcaaacccgc
      421 aatgttgatt ttaaagcaaa atctattggg actaaaattc atgatggagc tcaagggaaa
      481 catatttcag gacatagaaa ctacattgaa ggtaagagta ctttaaatca aaacattaat
      541 cctcaagaat tgttgaacgg aatacattca ggtgcttatc cagttatttc taaaggagca
      601 agaggaaatc ctgttgttga ttttgggtat cctataggca gcgatgggaa atcaggatta
      661 agtaccaatt ttggtacgat tcattcaggt aaaaatggag ttcacattgt tccggctaac
      721 cctaaaacca ttaaaaaggt gcaatagtta tgaatatatt accaagctgg ctgcgagtcg
      781 gtatgaatat agcaatgctg ggcatgatac actcagatat caggttaatt accgtagatt
      841 acgaggaagg aagaaggttt ttaaaaatca aaaattattt atcaagagaa gccatcacag
      901 aagaccatga agatatggaa tatttgatta cagagttatg gtctatgtgt ggagaatatt
      961 ttgatgaagc tgactttgaa tgtatttatt ctaatcattc ttctatggag ttaaaccaaa
     1021 taaatggtgc agtattcagg agaaaggaat taatttcgca agcgtaggtt aaaaaaccaa
     1081 caatcacaat gtcttctgaa accgtgttta attttcagac ggcatttcct tcgtttgaaa
     1141 taggatattg agaactgagt tcttcaaaaa tcctacactt gctccttcca cggcagcacc
     1201 ttggtcaaaa cggcagacgg ctgaaaagcc attgcccgta tccgaaccgg cgaccgcgtc
     1261 ttcgccaagg acgaggcaag cggaaaaacg ggatacaaac ccgttaccgc ccgatacggc
     1321 aatccgtatc aagaaaccgt ttacattgaa atttcagacg gcatcggtaa aatacagacc
     1381 ctcgtttcca ataaaatcca cccgttttac agtcaaggaa agtggataca ggcaggtcgt
     1441 ctgaaaaaag gcgacaccct gctttccgaa agcggtgcaa aacagacggt tcaaaacatt
     1501 accctcaaac agcagccgct caaagcctac aatctgaccg ttgccgactg gcatacctac
     1561 ttcgtcaagg gtaatcaggc ggaacggaag gggtttgggt tcataatgcg tgtccgccaa
     1621 gaaaaacacc atctaccccc gtatatggga atgattcaga agcatatgca gcagcaaaga
     1681 aattgggata tagaaaaata aaagaaagaa cgagaaatga tgctgctatt tttaaaaaag
     1741 gaaagagtta tatatcacgc gatgtagatt cacataatgg aggggcttgg aaagaagcat
     1801 cttcacccaa gaagctgaac agaaaagaaa caagaaacgg tacatttgat aaaaacctaa
     1861 atcgtattgg agattaatta t
//
LOCUS       DBBZXW010000183         1879 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.183, whole genome shotgun sequence.
ACCESSION   DBBZXW010000183 DBBZXW010000000
VERSION     DBBZXW010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.183"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..372
                     /locus_tag="ACJJD2_002093"
     CDS             <1..372
                     /locus_tag="ACJJD2_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7580548.1"
                     /translation="AAANKGKCQDGAIGAAVGEILGEALLDGRDPGSLNVKDRAKIIA
                     KAKLAAGTVAALSKGDVNAAANAAAVAVESNALSKERMDKLTKCLSGKTCSTTMEKVN
                     AIKKDEQFSKVIDTEIQKSLF"
     gene            410..892
                     /locus_tag="ACJJD2_002094"
     CDS             410..892
                     /locus_tag="ACJJD2_002094"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580549.1"
                     /translation="MSIKYIAMPAAWKYMPTDVSRVAKEVFGYLYNSQGASTRFDKYF
                     NTIDNRADFFAASNLYEQNLGSKARWFGGADFVSRAAITGLGADGEASYITFAAGKVV
                     GNPPIYEWRAASGNALIVNGFYNFRDLFNKKTNPREWDIQQLKSEQKLLQPIQPKIFE
                     "
     gene            1072..1506
                     /locus_tag="ACJJD2_002095"
     CDS             1072..1506
                     /locus_tag="ACJJD2_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580550.1"
                     /translation="MNKNYLFYLIQNIKSIFLIGGVFFGLLIFSGLWGNDFKLSFLGV
                     IDFIFGMVGGGFIVMLWFLIPVILSTLFRWVFQNQLAVSVILTFIVFYTYGYFSLFNS
                     SERVGSFWYLVIPTIMFIGLSEWFIYKSSVHSLGENVTPRSN"
     gene            complement(1574..1879)
                     /locus_tag="ACJJD2_002096"
                     /pseudo
     CDS             complement(1574..1879)
                     /locus_tag="ACJJD2_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244123.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS30 family transposase"
BASE COUNT          566 a          279 c          440 g          594 t
ORIGIN      
        1 gcggcggcga ataagggcaa gtgtcaggac ggcgcgatag gagcggcggt cggtgaaatc
       61 ctcggcgaag ccctactgga cggcagagac cctggcagcc tgaatgtgaa ggacagggca
      121 aaaatcattg ctaaggcgaa gctggcagca gggacggttg cggcgttgag caagggggat
      181 gtgaatgctg cggcgaatgc ggctgctgtg gcggtagaga gtaatgcgct tagcaaggaa
      241 agaatggata aattgacaaa atgcctttcc ggtaaaactt gttctactac gatggaaaaa
      301 gtaaatgcca tcaaaaagga tgaacaattt agcaaagtaa ttgatacgga aattcaaaaa
      361 agtctgttct aggaacccat tgggcgatgg ttgcagaaac ggcattaata tgtctattaa
      421 atatattgcc atgcctgctg cgtggaagta tatgcctacg gatgtatcac gggttgccaa
      481 agaagttttt ggctatttat ataactcaca aggggcatct acaagatttg acaagtattt
      541 caacaccatt gacaatcgtg cagatttctt tgctgccagc aatctttatg agcaaaattt
      601 gggttcaaaa gcacgatggt ttggtggagc tgattttgta tcgcgtgctg ctataactgg
      661 gttaggggca gacggagaag cttcttatat aacttttgcg gcaggtaaag ttgttggtaa
      721 tcctccaatt tatgaatgga gggctgcgtc aggcaatgca ctgatagtaa atggatttta
      781 taattttaga gacttgttca ataaaaaaac taatcctagg gagtgggata ttcaacagtt
      841 gaaaagcgag caaaagttat tacagcctat tcaaccaaaa atatttgagt aatgagaagg
      901 attatttgtc attgattaaa ggggtaacat caaataagat attttcaata attccaaatc
      961 ctttagatga gaggaaaaaa tagaggatgg aattaatatg ttagattaca aatctagaat
     1021 taaatatggt tgtaagctta tgggatattc tgagaaacag ggatgcaagc catgaataaa
     1081 aattatttat tttatcttat tcaaaatatt aaatctattt tcttaatagg tggagtattt
     1141 tttggccttt taattttttc aggtttatgg ggtaatgatt ttaaactatc ttttttaggg
     1201 gtaatagatt ttatatttgg gatggtaggg ggtgggttta tagttatgtt atggtttcta
     1261 attccagtga tattatcaac tttattcaga tgggtatttc aaaatcaact tgctgtatct
     1321 gtcatattaa ccttcattgt tttttataca tatgggtact tttctttatt taattcatct
     1381 gaaagagtcg gtagtttttg gtatttggta atcccaacca taatgtttat tggactgtct
     1441 gaatggttta tctataaatc tagcgtgcat agtttaggtg aaaatgtaac tccacgttcc
     1501 aattgaagaa aaagattgtc tgaaaactaa atttaatttc agatgacctt agattcggat
     1561 ttcaagtaca acactagggt atcgatggtt ggaacaaatt caagaataaa acacttggcg
     1621 tttcgtagcc aagtgttttt ctcggtcggt ggttcaactc atcttgaacc ctacgtatct
     1681 cccgatcgct gatgtttcgg aaaacggttt gtttggggaa tattgtcgga tgagtccatt
     1741 ggtgttttca ttcagccctt tctcccaaga atggtaaggg cggtaaaaat aggtttccgc
     1801 cttcaatgtt ttggccattt ggatgtgtcg gtagaattct ttgattaaac aagttgcaaa
     1861 taacttacct gatggtagt
//
LOCUS       DBBZXW010000184         1828 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.184, whole genome shotgun sequence.
ACCESSION   DBBZXW010000184 DBBZXW010000000
VERSION     DBBZXW010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.184"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..98)
                     /locus_tag="ACJJD2_002097"
     CDS             complement(<1..98)
                     /locus_tag="ACJJD2_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7580551.1"
                     /translation="MSTFFQQTSQAMIAKHIDRFPLLKLDQVIDWQP"
     gene            154..567
                     /locus_tag="ACJJD2_002098"
                     /pseudo
     CDS             154..567
                     /locus_tag="ACJJD2_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fe(3+)-pyochelin receptor"
     gene            710..1768
                     /gene="dinB"
                     /locus_tag="ACJJD2_002099"
     CDS             710..1768
                     /gene="dinB"
                     /locus_tag="ACJJD2_002099"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HGG7580552.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCASLLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
BASE COUNT          432 a          491 c          504 g          401 t
ORIGIN      
        1 ggctgccaat caatcacttg atccaacttc aatagaggga agcggtcgat gtgtttggca
       61 atcatggctt gggaggtttg ctggaagaag gtgctcatgg aaaatcccct aaatggcttg
      121 gtgggaattt aggggatttt ggggaatttt gcaaaggtct caggttatac ctacaacaag
      181 agcaggtata ggaatgcagc cgaagtcaac gccgaacgcc ttgccaaaaa ttccagtgca
      241 gacccgtaca acttcagcaa tttcacaccc gtgcatatat tccgtttcgg aacgagtttc
      301 catataccga atacggggct gaccgtcggc ggcggcgtgt ccgcacaaag cagcacaagc
      361 agcctgtaca acatcaggca gggcggctac gggctgatag acggtttcgt ccgttacgaa
      421 ttgggcaaac acgccaaatt gagcctcatc ggtacgaact taaacggacg cacttatttt
      481 gagaacaact acaaccgtac gcgcggcgca aacaacttct atggagagcc gcgcactgtc
      541 agcatgaaac tggattggca gttttaattg aaaaccgtag ttttgcggat gccgtctgaa
      601 cagggtatgt ttcagacggc atttttatgg aggcaggcct atcggggcgt atatttggaa
      661 tttgctcgat gccggcagta gaatatcctt tttatcttca gcagagccga tgtcttcacg
      721 caaaatcatc cacatcgaca tggacgcgtt ctacgcatcg gtagagctgc gcgaacagcc
      781 gcatttgaaa gggcggccgg tggtcgtcgc gtgggagggc gcgcgttcgg tgatttgcgc
      841 cgcatcgtat gaggcacggc agttcgggct gcattccgcg atgtcggtgg caacggcgaa
      901 aaggctgtgt ccgcaagcgg tgtatgtgcc gccgcatttc gatttgtacc gtcaggtttc
      961 cgcgcagatt cacgccgtat tcaggcgtta taccgattta atcgaaccct tgtcgctgga
     1021 cgaagcctat cttgacgtta cccgtaattt caaaaacatc ccttacgcca gtgaagttgc
     1081 caaagaaatc cgtgccgcca tttttgcgga aacaggtttg actgcatccg caggcatcgc
     1141 gccgaacaaa tttctggcga aaatcgcgtc ggactggcgc aagccgaacg ggcagtttgt
     1201 gttgccgccg cacaaagtca tggcattttt ggaaaccctg cctttgggca aaatccccgg
     1261 cgtgggcaag gtaacgctga aaaaaatgca gtcgctgggt atgcggacgg cgggcgactt
     1321 gcgccgtttc gagcgcggcg agctcttaaa ccatttcgga cgctacggct accgcctcta
     1381 tgatttggcg cgcggtacgg acgaacgccc cgtcaaagcc gaacgcgaac gcctccaaat
     1441 ctccacagaa attaccctgc ccgaagacct gccgctcgag caggctgccg gacacctccc
     1501 ccatcttgcc gaagacttgt ggcggcaaat cacgcgcaaa aacgtcgaag cccaaagtgt
     1561 aacgctcaag ctgaagacct acgatttccg catcatcacg cgcacgctga cttattcctc
     1621 cgtattgccc gactgcgcct ccctgcttca ggcggcgcaa atgttgatgg cgcgcgtccc
     1681 gccgcagacg gaagacgcgt tccgccttat cggtatcggc gtggggcatc ttgtgccgaa
     1741 aaaccagcag caggatttgt gggcgtaaac cgctttacgc gcgccgtcca aaaaatatgc
     1801 cgtctgaacg gttttcagac ggcatggc
//
LOCUS       DBBZXW010000185         1819 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.185, whole genome shotgun sequence.
ACCESSION   DBBZXW010000185 DBBZXW010000000
VERSION     DBBZXW010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.185"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..75)
                     /locus_tag="ACJJD2_002100"
     CDS             complement(<1..75)
                     /locus_tag="ACJJD2_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HGG7580553.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNAL"
     gene            complement(54..659)
                     /locus_tag="ACJJD2_002101"
     CDS             complement(54..659)
                     /locus_tag="ACJJD2_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580554.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            739..1026
                     /locus_tag="ACJJD2_002102"
     CDS             739..1026
                     /locus_tag="ACJJD2_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HGG7580555.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            998..1300
                     /locus_tag="ACJJD2_002103"
     CDS             998..1300
                     /locus_tag="ACJJD2_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HGG7580556.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIVEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
BASE COUNT          333 a          490 c          523 g          473 t
ORIGIN      
        1 tagggcgttg aacagttggt cgatggctac caacaggtgg taaacgtatt ttttcagccg
       61 atgtttagcg tccattcttc gatttccttt tccagcgcgt ccaatcctgg cgcggtttcg
      121 atggtgttca atttgtcttc gagctgctgc cgctttccga taatcgcgcc ggcggcaacg
      181 gccaggcggg cggatttttc gacaactttt tcaatcaaaa cgtccaattc cacgcccctt
      241 gcggcggcga tttgcgccag catcggggtc ggggcgttgt tgtccgcctg ccgcgcgagg
      301 gcttcttttt cctgcctgta aaagctgtcg atttccactt ggggatagcc cgccaagagg
      361 ctgtttttga gttcgtccgc ctttgccgcg aggcggaatg ccgtggcggt tttttgttcg
      421 gcgaaacggg cggcggcagc ggcttcgccg atttcccatt tcttgccgtc ccattcgtgg
      481 tattcggacg ggcgcggcgg ggttaaaacg gggcggccgt cggaatctgc ggcaatctgc
      541 ccgccctgcg cctgtcctgc caaaagggcg gcgtattctt cggcgcggac ggcaaccgcg
      601 ccttcgggga tgctgcccaa ggtgtcgtcg taaaagccgt ttttgaaata gatggtcatt
      661 tcggggtttc cttttttgta tttacatttt ggttttttgc cgcttataat gtaacgacaa
      721 aatacgctgc aagctgcaat gaagattgaa tttgactccg aaaaaaatca acgcaatatc
      781 gaagagcgga atttgccctt tgaatcagtc gggcaaatac gctggacaac ggccgttatt
      841 gtgcccgatg tctgctttga ttaccccgaa ccgcgttatg ttgccgctgc ttatctaggc
      901 gatacgcaac gcctgcacat tgtctgtttt acgccgataa aagacggcat ccgtgtcatc
      961 agttttcgca aagcgaataa aagagaggtt aaaaaatatg caacgtcaat ccttaacaaa
     1021 cgctgacggc gaagtgcggg aacttgccgc cgaagatttt gcgcttgccc gccccattgt
     1081 cgaagccctg cccgaagact tggcacaggt gcttttttcc catcaaaaac aattggaaga
     1141 aaagggcgta atgcaaaaac gaaacacagg caaaaccccg aaacaactcg ttaccatacg
     1201 cctgtccgcc gatgtggtcg aaaaattccg cgccggcggc aagggctggc agacgcgcat
     1261 caacgaggtt ttgcgccaat atgtcgccca attgaaataa cgggggcggc cgctgcttat
     1321 cgggcgcgcc cgactatcct ttcccgcgcg gtttcggccg tgcggttttt tgttgccggt
     1381 gccgtccgaa gggggcagcg gctttttgcg cggtcattcc cgcctttcgt tattcccgcc
     1441 actttccgtc attcccgcga aggcgggaat cccgaaaccc ctgccgccgt cattcccgcg
     1501 caggcgggaa tccagtccgt tcggtttcag ccgtttccga tagattcctg ccgcgtttgg
     1561 ggtctggatt cccgcctgcg cgggaatgac ggcggcgggg gtttctgttt tttccgatag
     1621 attcctgttg cgtcggggtc tggattcccg ctttcgcggg aatgacggcg gcgggggttt
     1681 ctgttttttc cgatagattc ctgccgcgtt tggggtctgg attcccgcct gcgcgggaat
     1741 gacggcggcg ggggtttctg ttttttctga tagattcctg ccgcgtttgg gggctggatt
     1801 cccgctttcg cgggaatga
//
LOCUS       DBBZXW010000186         1817 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.186, whole genome shotgun sequence.
ACCESSION   DBBZXW010000186 DBBZXW010000000
VERSION     DBBZXW010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.186"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(194..1363)
                     /gene="porA"
                     /locus_tag="ACJJD2_002104"
     CDS             complement(194..1363)
                     /gene="porA"
                     /locus_tag="ACJJD2_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin PorA"
                     /protein_id="HGG7580557.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNYQLQLTEAQ
                     AANGGASGQVKVTKAKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGG
                     ATQWGNRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDM
                     PVSVRYDSPDFSGFSGSVQFVPIQNSKSAYTPAHVVVNNKVATHVPAVVGKPGSDVYY
                     AGLNYKNGGFAGNYAFKYARHANVGRNAFELFLIGSATSDQAKGTDPLKNHQVHRLTG
                     GYEEGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDLIERG
                     KKGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          464 a          468 c          414 g          471 t
ORIGIN      
        1 tatatgtgca aaccaaaccg aaaatgcgaa ataccgtctg aaaatctttc agacggtatt
       61 tactgtcttt attgccgttt ttcttccgta tccggatttt tgtttggggc tgagcagatt
      121 ggcagtcaga ttgcaatcga agaatgaatg caagccgtca aaaacaaagc tatccgcttc
      181 accgccccga tatttagaat ttgtggcgca aaccgacgga ggcggcatta atttgagtgt
      241 agttgccgat gccggtattg cgtttcagcc aagcgccaga cacgatggcg gaagtgcgtt
      301 tggaaaaatc ataatcaacg ccggcgatga tttgatcgta gctggtattt tcgccttttt
      361 taccgcgttc gatcaagtcg aaaccatggg catagctgat gcgtggaact gcattaccga
      421 agcggtagga agcagtcgcg gcaatttcgg tcgtactgtt tttggttttg tcggcatttt
      481 cagacaaatc caactgagcc gccaaggcga gattcaagcc gccttcctca tagccgcccg
      541 tcaggcggtg tacctgatgg tttttcaagg gatcggtacc tttggcttga tcactcgtcg
      601 cgctgccgat caagaacaac tcaaaagcat tacgtccgac attggcgtgt ctcgcatatt
      661 taaaggcata gttcccggca aaaccgccat ttttgtaatt cagaccggca taatacacat
      721 ccgatccggg cttgccgaca acagccggaa cgtgagtagc aaccttgtta ttcacaacaa
      781 catgagccgg cgtataggcg gacttgctgt tttggatcgg aacgaattga acgctgccgc
      841 tgaaaccgga aaagtccgga gagtcgtagc gtacagaaac cggcatatcg tcgtggcgtt
      901 tgaaaatacc caattgcgaa gccacatcat tgttgctgtc ccaaggatca atggcttggc
      961 tggcatcgtc aaactgattc gcaacgcgac cggcgcgcag cgtaccgaat tcgcctgcca
     1021 agccgataaa ggattccctg ttgccccact gggtcgcgcc gccgccggca acggatacgt
     1081 cttgctcaag ctgccaaaca gctttcagac cttcgcccaa atcctcgctc cccttaaagc
     1141 cgataaacga gccgaaatca ctgattttcg tcctgatgcg gcttttggcc ttagtaactt
     1201 ttacctgacc gctcgctcca ccgttagcgg cttgtgcttc agtcaattgc agctggtagt
     1261 tcctgccttc cacgccggct ttgatttcgc cgtataggct gacatcggca acggccgcaa
     1321 gcggcagtgc ggacaatacg agggcggtaa gtttttttcg catatcggct tccttttgta
     1381 aatttgataa aaacctaaaa acatcgggca aacacccgat acgtcttcaa ttataccccc
     1441 cccccccgca aaaaaccatt tttcagaaca aatatctgat aaatgccgca acctttattt
     1501 taaaaatgat tatattttga tataaaacaa tagcttattt tttcaaaaac gttgtgtttc
     1561 tacaacacaa ttcaagcgca gacctcgtgc gagccgatgc gctgctgccc ggatgcagtc
     1621 tcggcttttt aaaacgccat aaaaaaacac acgcggcact ttatagtgga ttaacaaaaa
     1681 ccagtacggc gttgcctcac cttagctcaa agagaacgat tctctaaggt gctgaagcac
     1741 caagtgaatc gattccgtac tatctgtact gtctgcggct tcgccgtctt gtcctgattt
     1801 ttgttaatcc actataa
//
LOCUS       DBBZXW010000187         1814 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.187, whole genome shotgun sequence.
ACCESSION   DBBZXW010000187 DBBZXW010000000
VERSION     DBBZXW010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.187"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1706
                     /locus_tag="ACJJD2_002105"
     CDS             <1..1706
                     /locus_tag="ACJJD2_002105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580558.1"
                     /translation="EQDLIPYAVRFRLNQILPELDCHWQENLTEIFKTLSPEAGQAAC
                     TQILSRKGIGYNEADGSFTYLPQKRISFSSLATDIPIPDLKRLAGHIAERLDVLAQCE
                     SPVYIADILESVLSVIKNVDTGGKRARENFKQILKTEFIYAAAAVLKNKTKWEIPENT
                     RNLDSDIICTYICEVFLKSHLLGNSFPMMRPREVKQMPEPVFDKVLFAEQRARQLEVI
                     RTSKYIFAIAPYYTDDIPFSLRRFLSEDKLYTSYNRYYTAIHIPVRNITQNDALRFAN
                     GLKQILSLQSGVSWEIIDMMDRIEENYDKKALPLLFSPFPAQVERTQAIAARLDQFER
                     LLGDTVLDPFYYCLTRMAKGEEDLKYIYIAFRQSFGGIFNSFENFRLLPALWMSRDAE
                     NMSDRMNAYISAMEDRRREILSIRQGKPEEEFSRKMVVCLIDLENCLEKHLEQFKPVS
                     ESIEACTAKLQEQPSFFNRLMKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHRE
                     VVSVHNRKADYAEKGKEQIALFPRGLNGITKLPAAVLLPERPYHFDMKEVLHIFSWIP
                     R"
BASE COUNT          470 a          508 c          425 g          411 t
ORIGIN      
        1 tcgagcaaga ccttatccct tacgccgtcc gtttcaggct caatcaaatc cttcccgaac
       61 tcgactgcca ttggcaggaa aatctgacag aaatcttcaa aacactttct cccgaagccg
      121 ggcaggccgc ctgtacgcaa atcctttccc gaaaaggcat aggctataac gaagccgacg
      181 gttcttttac ttaccttccc caaaaacgca tttcgttttc ttctttggca acagacattc
      241 ccatccccga cctcaaacgg ctggcggggc atattgcgga acgcctggat gtattggcgc
      301 aatgcgaatc gccggtttat attgccgaca ttctcgaaag cgtgctgtcc gttatcaaaa
      361 acgtcgatac cggaggcaag cgcgcacggg aaaatttcaa acagattctg aaaaccgaat
      421 tcatctacgc cgccgctgcg gtattgaaaa acaaaaccaa atgggaaatc cccgaaaata
      481 cccgcaatct cgattcggac atcatctgta cctatatctg cgaagtgttc ctaaaatcgc
      541 acctgctcgg caacagtttt ccgatgatgc gcccgcgcga agtgaagcag atgcccgaac
      601 cggtgtttga caaagtattg tttgccgaac agcgcgcccg ccagttggaa gttatccgaa
      661 cgtcaaaata catcttcgcc atcgcgcctt attacaccga cgatattccg ttttccctgc
      721 gccgcttcct gtcggaagac aaactttata ccagctacaa ccgctattac accgccatcc
      781 atatccccgt ccgcaacatc actcagaatg atgccctgcg ttttgccaac ggtttgaaac
      841 agattctctc gctgcaatcc ggcgtgagct gggaaatcat cgatatgatg gacaggatag
      901 aggaaaacta cgacaaaaaa gccctgccgc tgttgttttc gccattcccc gcgcaagtcg
      961 aacgcacgca ggcgattgcc gccagattgg accaattcga gcggctgttg ggcgacaccg
     1021 tcctcgatcc gttctactat tgcctgacgc gtatggcgaa gggcgaggaa gatttgaaat
     1081 atatttatat cgccttccgc cagtctttcg gcggcatctt caattcgttt gaaaacttcc
     1141 gcctgctgcc cgcgctgtgg atgagcaggg atgcggaaaa tatgtccgac cgcatgaacg
     1201 cctatatttc cgcaatggaa gaccgccgcc gcgagatatt gtccattcgg cagggaaagc
     1261 ctgaagaaga attttcccgc aagatggtcg tctgcctgat cgacttggaa aattgtttgg
     1321 aaaaacacct cgaacagttc aagccggtat cggaaagcat cgaagcctgt accgccaaac
     1381 tgcaggagca accgtcgttc ttcaacaggc tgatgaaaac caacgacaag ctcaacaggc
     1441 agattgacgt gttgcagaaa cagtcggcag ccatccacaa cgaagcctat atcgaaatga
     1501 acacgctgct ttaccgccac cgcgaagtgg tttccgtcca caaccgcaaa gcagattatg
     1561 cggaaaaggg caaagagcag attgcgctgt tcccgcgcgg attgaacggc atcaccaagc
     1621 tgcccgccgc cgtcctgttg cccgagcgtc cctaccattt tgatatgaag gaggttctgc
     1681 atatattctc ctggataccg aggtaggcgt atcggctgcc ggataaaaat gcaccccgtc
     1741 attcctgtct gtacgggggt agcggcagtg ttttcctgct tcgttttata gtggattaac
     1801 aaaaaccagt acgg
//
LOCUS       DBBZXW010000188         1746 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.188, whole genome shotgun sequence.
ACCESSION   DBBZXW010000188 DBBZXW010000000
VERSION     DBBZXW010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.188"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(16..447)
                     /locus_tag="ACJJD2_002106"
     CDS             complement(16..447)
                     /locus_tag="ACJJD2_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580559.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTNCSLHET"
     gene            complement(463..>1746)
                     /locus_tag="ACJJD2_002107"
     CDS             complement(463..>1746)
                     /locus_tag="ACJJD2_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7580560.1"
                     /translation="NTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGA
                     IGAAVGEIVGEALTNGKNPDTLTAKEREQILAYSKLVAGTVSGVVGGDVNAAANAAEV
                     AVKNNQLSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNVADKRLAASIAICTDIS
                     RSTECRTIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSYTQADLALQSYHLNTAA
                     KSWLQSGNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQNTPITNVKYPEGISFDT
                     NLKRHLANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSETQTDIEGITRIKYEIPT
                     LDRTGKPDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQGYSKASKIAQNERTKSI
                     SERKNVIQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          469 a          337 c          295 g          645 t
ORIGIN      
        1 ccttacgcat ggattttagg tttcatgcag gctacagttt gtttgagaat atgttttttg
       61 tatttcttta cacttttttt gatattcagg gtgagctatt aagaaatcag atattgcaat
      121 attaaagtaa tgatatgcta aattaatagg tataattaat tcttcaggat tgaaatcatc
      181 tccaactgaa aaataaatag aaggagcttt atcaatatac tcaaatccat ttacctcttc
      241 ataatctcca atccatctgg tagcatctat tttttcatat tgagcaccta ttactccaaa
      301 atgtccggta gttgtaatat ttttaaaaca ctctaaaagc gtatctttag tttcaaattg
      361 gtaaattgtt tcaaaaaaaa tcgaaataac aaaatggttg ttatttatag attttttatt
      421 taagtttaga aaaatattat ttttcataat ttttccttta aattattctg ggtgaatgtt
      481 tgtaattctt cctgtattta catcaaaata tgatctaaat ttgattccgt caaaggtttc
      541 tgagaattga atgacatttt ttctttccga tattgattta gttctttcat tttgagcaat
      601 tttagaggct tttgaatatc cttgtgaagc agcattttga gccatttgaa gtattttatc
      661 atcagaaaat tttttaggat tataaacagt ttttatactt gaaatttcct taaatccacc
      721 atcaggttta cctgtcctgt ctagtgtagg aatctcatat ttaattcggg taatgccttc
      781 aatatcagtt tgggtttcag attttacgcg tcctcctcgt gaatttagtt ctgccataaa
      841 attggtgcgg ttatgggctc ctttaatgcc ctgtttttga ctaaaaccat cagcatttgc
      901 cagatgtctt tttaggtttg tatcgaaact gatgccttcc gggtatttga cattagtaat
      961 aggtgtattt tgttttacaa accctcttgg tattggaatg aatctaggat taactcctga
     1021 aataagtgta taaccttggt cggacatcca ttcggataaa ggctttgtat tgcccgattg
     1081 aagccaagat ttagcagcag tattcaaatg ataagactgt aaagccaaat ctgcttgggt
     1141 gtaagatttg ctgaataatt tataccattc atcatcttta ccaattagac ctgcttccca
     1201 agatgaatga aggcttctac tatcgatcaa atgttgtttt ctgattgttc tacattcagt
     1261 actacgggat atatccgtac atattgcaat cgaagcagca agtcttttat cagcaacatt
     1321 ttgatacttt tttacagtat tttttctgca cagttgagga ttattctgtt tggcgcatgc
     1381 agtcatttcg ttatcaaatt ctctaccctc tttgtcgcta agctgattat ttttcaccgc
     1441 tacctcagcc gcattcgccg ccgcatttac atcgccgccg accacaccgc ttaccgtacc
     1501 ggcaaccagt ttgctgtatg ccaaaatctg ttcgcgttct ttagctgtca aagtgtcagg
     1561 atttttgccg tttgtcaaag cctccccgac tatctcgccc acagccgcac ctatcgcacc
     1621 atcctgacac ttgcccttat tcgccgccgc tgccgcacag cccgctatgg catgggcaat
     1681 cttgtggact atgtagtgct gatccaactg tttgatttta ctggctgctt ctccatgcgc
     1741 ggtatt
//
LOCUS       DBBZXW010000189         1746 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.189, whole genome shotgun sequence.
ACCESSION   DBBZXW010000189 DBBZXW010000000
VERSION     DBBZXW010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.189"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            106..1479
                     /locus_tag="ACJJD2_002108"
     CDS             106..1479
                     /locus_tag="ACJJD2_002108"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG7580561.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
     gene            1659..>1746
                     /locus_tag="ACJJD2_002109"
     CDS             1659..>1746
                     /locus_tag="ACJJD2_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009118462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HGG7580562.1"
                     /translation="MSTQFDVAVIGAGPAGSVASALLRKKGYS"
BASE COUNT          443 a          569 c          414 g          320 t
ORIGIN      
        1 ctgcggctcg ccgccttgtc ctgatttttg ttaatccact atatttcccc gtcctatcgg
       61 tttcccgttt cagacgacat aaggtctgaa agaaagacta caattatgag taatccattt
      121 tcctctttag gtttgggtac ggaactcgtt tccgcactga ccgcgcaagg ttacgaaaac
      181 ccgacgccca tccaagccgc cgccattccc aaagcactcg ccggtcatga tttgctagcc
      241 gccgcgcaaa ccggcacagg caaaaccgcc gcctttatgc tgcccagtct ggaacgcctc
      301 aaacgttacg ccaccgccag cacctcgccc gcgatgcacc ccgtgcgtat gctcgtcctt
      361 acccccacgc gcgaacttgc cgaccaaatc gaccaaaacg tgcagtccta catcaaaaac
      421 ctgccgcttc gccacaccgt cttgttcggc ggtatgaata tggacaaaca gaccgccgat
      481 ttgcgtgccg gctgcgaaat cgtcgtcgcc accgtcggac ggctgctcga ccacgtcaaa
      541 caaaaaaaca tcagtttgaa caaagtcgaa atcgtcgttc tggacgaagc agaccgcatg
      601 ttggatatgg ggtttatcga cgacatccgc aaaatcatgc agatgctgcc caaacaacgc
      661 caaaccctgc tcttttccgc taccttctcc gcaccgatac gcaaactggc gcaagacttc
      721 atgaacgcgc ccgaaaccgt cgaagtcgcc gcgcaaaaca ccaccaacgc caacgtcgaa
      781 caacacatca tcgccgtcga taccattcag aagcgcaacc tgctcgaacg gctgattgtc
      841 gatttgcata tgaaccaggt catcgtgttc tgcaaaacca aacaaagcgt cgaccgcgta
      901 acgcgcgaac tggtgcgccg caacctgtcc gcacaggcga tacacggcga ccgttcccaa
      961 caaagccggc tcgaaacact caacgccttc aaagacggca gcctgcgcgt cctcgtcgcc
     1021 accgacatcg ccgcgcgcgg gctggacatt gccgaactgc ccttcgtcat caattacgaa
     1081 atgcccgccc agcccgaaga ctacgtccac cgcatcgggc gcacggggcg cgcgggcgcg
     1141 gacggcgtgg cgatttccct gatggacgaa tccgaacaga aaatgtttga atccattaaa
     1201 gagctgaccg gcaacaagct gctcatcgag cgcatcgagg gcttcgagcc gcaatggtgg
     1261 gaacagggcg gcgcaaaacc ggaaaaaacc gaaatgcgcg aaccgagaca acgcaaccgc
     1321 tacgaatccg ccagggctca gcgcgaaaaa aatacccgac cggaaaccac ggcaaacgat
     1381 gcgggcgcgg cttgcggaaa aattgccgga cgcagccgcc gaagccgtcg ggaacaccgg
     1441 acgtgcgccc tgctccaacc gcgttacggc gtaaaataac cctgaaaatc aaatgccgtc
     1501 tgaacatttc ccgtttcaga cggcattttt caaaccggac tgacgcattg ggagcaaccg
     1561 cccgcaccgg ataaatttct tccgcaaaca gtttcagacg gcatttgctg cctgtacaat
     1621 atcatttcct tttccactca aaccatcagg atttcccaat gtccacccaa ttcgatgtcg
     1681 ccgtaatcgg cgcaggtccg gcaggctcgg tcgcatccgc cctgctccgc aaaaaaggtt
     1741 atagtg
//
LOCUS       DBBZXW010000190         1735 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.190, whole genome shotgun sequence.
ACCESSION   DBBZXW010000190 DBBZXW010000000
VERSION     DBBZXW010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.190"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..566
                     /gene="mutL"
                     /locus_tag="ACJJD2_002110"
     CDS             <1..566
                     /gene="mutL"
                     /locus_tag="ACJJD2_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="This protein is involved in the repair of
                     mismatches in DNA. It is required for dam-dependent
                     methyl-directed DNA mismatch repair. Promotes the
                     formation of a stable complex between two or more
                     DNA-binding proteins in an ATP-dependent manner without
                     itself being part of a final effector complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HGG7580563.1"
                     /translation="AQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQ
                     SQRLLIPVTFATSHEECAALSDHADALAGFGLELSDMGGNTLAVRAVPAMLGKADVVS
                     LAKDVLSELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLRDMENTPR
                     SNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            574..>1735
                     /gene="dnaX"
                     /locus_tag="ACJJD2_002111"
     CDS             574..>1735
                     /gene="dnaX"
                     /locus_tag="ACJJD2_002111"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HGG7580564.1"
                     /translation="MLEYAARDRRSDGIPTHRQKHHDRNQEKNMAYQVLARKWRPKTF
                     SDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPC
                     GVCESCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKYKVYIIDEVHML
                     SKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVADHLAH
                     VLDSEKIAYAPPALQLLGRAAAGSMRDALSLLDQAIAMGSGSVAEQDVRQMIGAVDKQ
                     YLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQHLALIQAVPNALAHD
                     DPDSDILHRLAQTISGEQIQLYYQIAVHGKRDLSLAPDEYAGFMMTLLRMLAF"
BASE COUNT          439 a          583 c          417 g          296 t
ORIGIN      
        1 ttgcccaatt actaggcatc tacattcttg cccaagccga agacagcctg ttgctcatcg
       61 atatgcacgc cgccgccgaa cgcgtcaact acgaaaaaat gaaacgccaa cgtcaggaaa
      121 acggcaaact acaaagccaa cgcctgctta ttcccgtaac cttcgccacg tcccacgaag
      181 aatgcgccgc cctctccgac catgccgatg cactggcagg cttcggcttg gaattgtccg
      241 acatgggcgg caataccctt gccgtccgcg cagttcccgc catgctaggt aaagccgacg
      301 tcgtttcact ggccaaagat gtattgagcg aacttgccca agtcggcagc agccaaacca
      361 tcgaagaaca cgaaaaccgc atcctcgcca ctatgtcctg ccacggctcg atccgcgccg
      421 gccgccggct caccctgccc gaaatgaacg cccttctgcg cgatatggaa aatacgccgc
      481 gcagcaacca gtgcaaccac ggcaggccga cttgggtcaa actgactttg aaagaattgg
      541 acgcactgtt cttgcgcgga cagtaagccg aaagtgctag aatacgccgc ccgagaccgc
      601 cgttcagacg gcattccgac gcaccgacag aaacatcacg accgaaacca agagaaaaac
      661 atggcctatc aagttctcgc ccgaaaatgg cggcccaaaa ccttttccga cctagtcggt
      721 caggaacacg tcgtcaaagc cctgcaaaat gccttggacg aaggcaggct gcaccacgcc
      781 tacctgctga ccggtacgcg cggcgtgggc aaaaccacca tcgcccgcat ccttgccaaa
      841 agcctcaact gcgaaaacgc gcaacacggc gaaccttgcg gcgtatgcga aagctgtacg
      901 cagatcgatg ccggacgcta tgtcgacctg ctcgaaatcg acgccgcctc caacacaggc
      961 atcgacaaca tccgcgaagt cttggaaaac gcccaatacg cgccgaccgc cggcaaatac
     1021 aaagtctata tcatcgacga agtgcatatg ctttccaaaa gcgcgttcaa cgctatgctc
     1081 aaaacgctgg aagagccgcc cgaacacgtc aaattcatcc ttgccacgac cgatccgcac
     1141 aaagtccccg ttaccgtatt aagccgctgc ctgcaattcg tcttacgcaa tatgaccgcg
     1201 cagcaggttg ccgaccacct tgcccacgtc ctcgacagcg aaaaaatcgc ctacgccccc
     1261 cccgccctgc aacttttggg acgcgccgcc gccggatcga tgcgcgatgc cttgagcctg
     1321 ctcgaccaag ccatcgccat gggttcgggc agcgttgccg aacaagacgt ccgccaaatg
     1381 atcggtgcgg tcgataaaca atacctgtac gaactgctga caggcatcgt caaccaagac
     1441 ggcgaagccc tgctggcaaa agcacaggaa atggctgcgt gtgccgtcgg ctttgacaac
     1501 gccttgggcg aacttgccat actgctgcaa cacctcgccc tgatacaggc agtgccgaat
     1561 gccttggcgc acgacgaccc cgattccgat attttgcacc gcctcgccca aaccataagc
     1621 ggcgaacaaa tccagcttta ctaccaaatc gccgtccacg gcaaacgcga cctgagcctc
     1681 gcccccgacg aatacgccgg ctttatgatg accctgctgc gtatgctggc gttcg
//
LOCUS       DBBZXW010000191         1720 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.191, whole genome shotgun sequence.
ACCESSION   DBBZXW010000191 DBBZXW010000000
VERSION     DBBZXW010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.191"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            342..1646
                     /locus_tag="ACJJD2_002112"
     CDS             342..1646
                     /locus_tag="ACJJD2_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HGG7580565.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDATAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGVVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          353 a          431 c          509 g          427 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggatcggat gcgatatttc catattcaaa caagggattg gcggcacatc ggcaaaatcc
      241 ccgcgccgcc ccggtccggc agggcttgcg tccctcccgg acaagccccg accccgcctt
      301 tccgaaagac gggctcaacc attaaggaaa ctttagtcaa aatgaaaaaa cacatatggg
      361 cggcatcttt gctgccggca tccctatcgg cagaaccttt aaactggtgg aagccttatt
      421 ccgccgtcaa ttcgggcgat accgcctggg tgatgactgc ggctgccttg gtactgttga
      481 tgacgcttcc cgggctggct ttattctacg gcggtatggt gcggaaaaaa aacctgctct
      541 cgacgatgat gcacagcttt tccatcgcga cattggtggg catcctttgg gtcgccgtcg
      601 gctattcttt agcgttcacg ccgggaaatg cctttatcgg cggtttgggg cgcgtatttt
      661 taagcgggat gcagatagac gctaccgcac agatgctgac cgtgtcgccc aatgcgccga
      721 ctgttcccga accggtattt atgttttttc agatgacgtt tgccattatt tcgaccgcca
      781 ttattaccgg cgcgtttgcc gaacggatga aatattcggc aatgatgctg ttttcgggca
      841 tatggttttt attggtttat gtgccgggcg cgcattgggt gtggggcggc ggctttatga
      901 gcaagggcgg cgtattggat tatgccggcg gtacggtggt gcacatcaat gccggtatcg
      961 cgggactcgt cgccgccttg gttttgggca ggcgcatagg ctacgggcgc gaggcgatgc
     1021 ctccgcacaa tatggcgatg acactgatcg gcgcggcaat gttgtggttc ggctggttcg
     1081 gctttaacgc cggatcggcg cttgcggcag acgcggcggc gggtatggcg atggcggtaa
     1141 cgcaggtgtc ggccgtattc ggcgcggcag gctggcttgc ctgcgaaaaa atagcgggac
     1201 acaaaccttc cgctttgggg ctggcttccg gcgcggtttc cggtctggtc ggcatcaccc
     1261 ctgccgccgg ctttaccggc ccgtcgggcg cggccgccat cggtatattg actgccgccg
     1321 cgtgctttgt gtccgtcacc gtcgtcaaac acaaattgcg ttacgatgat tctttggacg
     1381 ctttcggcat acacggattc ggcgggctgg tgggcggaat attgaccggc atctttttcg
     1441 acaaccgcat tttcggcggg gatgcggcag tttggcagca gttgtggata caggtaaaag
     1501 acggggtcgt tatggcggca tacagcgggc taatgagttg ggcgattttg aaggtcgtgg
     1561 ggaaaatctg cggcggcctg cgcgtcggca aggatgtcga acgcgaaggt ttggatctga
     1621 atatccacgg cgaacgcgtg gaataagggc ggctatgccg tctgaagcct gaaaatcggg
     1681 tttcagacgg catttttcac gtttgccgcc gatggataaa
//
LOCUS       DBBZXW010000192         1657 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.192, whole genome shotgun sequence.
ACCESSION   DBBZXW010000192 DBBZXW010000000
VERSION     DBBZXW010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.192"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            565..1488
                     /gene="lpxC"
                     /locus_tag="ACJJD2_002113"
     CDS             565..1488
                     /gene="lpxC"
                     /locus_tag="ACJJD2_002113"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HGG7580566.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
BASE COUNT          423 a          410 c          383 g          441 t
ORIGIN      
        1 aaacccacaa acagaaacct aaaattcgtc attcccgcaa aagtgggaat ccagtccgtt
       61 cagtttcggt catttccgat aaattcctgc tgcttttcat ttctagattc ccactttcgt
      121 gggaatgacg ggattagagt ttcaaaattt attctaaata gctgaaactc aacgcactgg
      181 attcccgcct gcgcgggaat gacgaagtgg aagttacccg aaacttaaaa caagtgaaac
      241 cgaacgaact ggattcccac tttcgtggga atgacgaatt ttaggttgct gtttttggtt
      301 ttctgttttg gttttatgtc cttgtgggaa tgacggttta cgcgaaaatg ccgtccgaaa
      361 ggttttcgga cggcattttt tgcgtttttc aggagggggg cggcttcgtc gccttgtctt
      421 gatttttgtt aatccactat acatttttat gcggcttacg tattgaaaac ggatacattg
      481 gcaaatacta tggaaaaaca tagcttgttt ttccggtttt atcgtattat tccaaaactt
      541 accccattga taaggaagcg gtttatgctg caaagaactt tggcgaaatc catcagcgtt
      601 accggagtcg ggctgcattc gggcgaacgc gtcgcgctga ccctgcaccc cgcgcctgaa
      661 aacagcggga tttccttccg ccgtaccgat ttggacggcg agatgggcga acaaatcaag
      721 ctgacccctt atttgatcaa cgatacccgc ctttcctcca ccatcgttac cgacaaaggc
      781 gtgcgcgtcg gcacgatcga acacattatg tccgcgctgt ccgcctacgg tatcgacaac
      841 gcgctgattg agctgaacgc gcccgaaatc ccgattatgg acggctccag cctgccgttt
      901 atttaccttt tgcaagatgc gggcgtggtc gatcaaaagg cgcaaaagcg ttttttgaaa
      961 atcctcaagc ctgtcgaaat caaagaagcg ggcaaatggg tgcgctttac gccgtatgac
     1021 ggctttaagg taacgctgac catcgaattc gaccatccgg ttttcaaccg cagctcgccc
     1081 acttttgaaa ttgatttcgc cggcaaatcc tacatcgacg aaatcgcgcg cgcgcgcact
     1141 ttcggcttta tgcacgaagt ggaaatgatg cgcgcccaca atctgggttt gggcggcaat
     1201 ttgaacaacg ctatcgtgat tgacgacacg gatgtcctga atcctgaagg cttgcgctat
     1261 cccgatgagt ttgtgcgcca caaaatcctt gatgccatcg gtgatttgta tatcgtcgga
     1321 catccgattg tcggcgcgtt tgaaggctac aaatcgggac acgccatcaa caacgcactc
     1381 ttgcgcgcgg ttttggcaga cgaaacggct tacgaccggg tggaatttgc cgacagcgat
     1441 gatttgcccg acgcatttca cgagctgaac atcagaactt gtggataacg ctttctattt
     1501 tttccggtaa attcctaaaa cttaaaattt catcattcct acaaggacaa aaaaccaaaa
     1561 cagaaaccta aaattcgtca ttcccgcgaa cctacatccc gtcattccca cgaaagtggg
     1621 aatctagaat ctcggacttt cagataatct ttgaata
//
LOCUS       DBBZXW010000193         1648 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.193, whole genome shotgun sequence.
ACCESSION   DBBZXW010000193 DBBZXW010000000
VERSION     DBBZXW010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.193"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..359)
                     /locus_tag="ACJJD2_002114"
     CDS             complement(<1..359)
                     /locus_tag="ACJJD2_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580567.1"
                     /translation="MSAFRKILLIISCLLIASCSFVETIFYMAISPEPVVVDFPLGKK
                     TKRSIELKQKIGKPYAISLGTNFIHYDPKQGERWIDDKLNYPYNISVKIFKVEEDGKK
                     LIIDELLTERSRKLGGGV"
     gene            complement(619..889)
                     /locus_tag="ACJJD2_002115"
                     /pseudo
     CDS             complement(619..889)
                     /locus_tag="ACJJD2_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248307.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein frpA"
BASE COUNT          582 a          264 c          212 g          590 t
ORIGIN      
        1 actccgcctc ctaattttct acttctctct gtaagcaact catctataat aagtttttta
       61 ccatcttctt ccactttaaa tattttaacc gatatattat atggatagtt taacttatca
      121 tcaatccacc tctccccctg ttttggatca taatgtataa aattagttcc taacgatatt
      181 gcataaggtt taccaatttt ctgtttgagt tcaatagatc tttttgtttt tttaccaaga
      241 ggaaagtcta ccacaacagg ttctgggcta atagccatat aaaaaatagt ttcaacaaaa
      301 ctgcagctag caatcaatag gcaagatatt attaataata tttttctaaa tgcagacata
      361 ataaaaatct ccaaaaaatc catatcagaa tatactaatt atttgcataa ttaataagga
      421 agagaaaaat tcaaaacggc tatgagattt ccgcctgaaa ataatgaaat aaaagtccat
      481 agtaatgaat aatagcttta tcagcccccc tttaatgcaa acatagagaa tacttccctt
      541 gaagcactat caatttctac ttaactaaaa ctctagctct attttaaaat tttgtcaaaa
      601 atagttaaat acttttattt attttaaata atgagataca tttatggtta tttgttttag
      661 acagcctaaa acaaacgggg aaatcgtgtt ttcccgaaca tggctaatgg atagcatttt
      721 gtccgtgagg aggctgtgca ggtttgtcag cagccaacag cgaatcgcct gcttgcgcgg
      781 ttgtgccgtc ttttttggtg tagctgcctt gttgagccaa agtgttgccg ttaccaagat
      841 ttttgtttac atcttttcga gaaaattggc tttgcatttg ccttaacaaa gatatttctg
      901 ctactcgtgc tttattattt atattatatt tactctgcat ttttcttaca acttgtctca
      961 actgactttg tgttttttgt aattcacgtt gtaccgattt tcctaaactt tcatgtttgg
     1021 ctgcataatt ggtagaatca gttgacattt gtgtataaaa atttttacga aaattttcgt
     1081 aactcagatt aattacatcc gtacttgcag ttataaaatc ttgtataaat tcaatagaaa
     1141 ctgaattatc atcagatttg gctttgttat tttccatatt gagcctctct taatttgaaa
     1201 aaattaacat aaacatttaa aaataaaaca aaattatata ataaaaaaaa taatgagaat
     1261 ataaaggata aaaagagagt taagttattt aatcggactt gttctctata aatcataagg
     1321 caccaaataa gccataataa atttagtaaa taaaaactgc ttatacccaa ctttcttttc
     1381 ttggaaccta ttattatttc aactctggat gaaaaaatag aatttaaaaa tttttttctt
     1441 tgatatatcg ttaatatctc cctagttttt cttaaaaaaa tataatcata tatatactac
     1501 acaacattgg taataaataa attaaaagcg aaaggtaatt aaattgataa ttgtaaatta
     1561 tataataaac aacatacgaa gaaaaaatta ttatagatga tttgctatac gaataaaaaa
     1621 atatcctacc tagcccgaac cttcttat
//
LOCUS       DBBZXW010000194         1554 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.194, whole genome shotgun sequence.
ACCESSION   DBBZXW010000194 DBBZXW010000000
VERSION     DBBZXW010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.194"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>1554
                     /locus_tag="ACJJD2_002116"
     CDS             <1..>1554
                     /locus_tag="ACJJD2_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7580568.1"
                     /translation="YIADIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNINWNQVQLAY
                     DKWDYKQEGMTPAAAAVVVIVVTVLTYGALSAPAAAGTAGAAGAGAGGAAAGTAAGTG
                     VAAGTAATTGVAAGTSAAAITTAAGKAALASLASQAAVSLINNKGDINHTLKELGKSS
                     TVRQAATAAVTAGVLQGISGLNTQAAEAVSKHFHSPAAGKLTANLINSTAAASVHTAI
                     NGGSLKDNLGDAALGAIVSTVHGEVASKIKFNLSEDYIAHKIAHAVAGCASAVANKGK
                     CRDGAIGAAVGEMVGETLLDGRDVGKLSPQERQKVIAYSQIIAGSVVALVKGDVNTAA
                     NAATVAVENNSLLARRRVNIRWTPRQELEHEYAILEIQAITNQIRRLDPKFNGIAILR
                     TPGEPWTRHDVQTYRQYYNQLRESRGFAVDPIYRIRINNGNEFNRIMSSKYPYNELYV
                     ANPKSATGYFRVDSYNPATEEIISRKFTQFSQIQESTGIGYIKEAVRKYSPGAVISNV
                     PSTPTTIRGR"
BASE COUNT          476 a          393 c          398 g          287 t
ORIGIN      
        1 tatatcgccg acatccccaa aggcaacctc aaaaccgaaa tcgaaaaact cgccaaacag
       61 cccgagtatg cttatttaaa acagcttcaa gttgcgaaaa acatcaactg gaatcaggtg
      121 cagcttgctt acgataaatg ggactacaaa caggagggca tgacacccgc agcagcagct
      181 gtcgtcgtta tcgtcgtaac tgtattgacc tacggcgcac tgtccgcccc ggcagccgcc
      241 ggaacggcgg gcgcggcagg cgcaggagcg ggaggagccg cagcaggaac ggcagccgga
      301 actggagtag cagcaggaac ggcagccaca accggagtag cagcaggcac atcagctgca
      361 gctatcacca cagccgcagg caaagccgca ctggccagtc tcgccagcca agccgcagtt
      421 tccctcatca acaacaaagg agacataaac cataccctga aagaactggg caaaagcagc
      481 accgtcagac aggccgccac cgccgccgta accgcaggcg tactgcaggg cataagcggg
      541 ctgaacaccc aagcagccga agccgtcagc aaacattttc acagtcccgc agcaggcaaa
      601 ctgaccgcta acctgatcaa cagcaccgct gccgcaagtg tccataccgc catcaacggc
      661 ggcagcctaa aagacaactt gggcgatgcc gcactgggtg cgatagtcag taccgtacac
      721 ggagaagtag cgagcaaaat caaatttaat ctcagcgaag actacattgc ccacaagata
      781 gcccatgccg tagcaggctg tgcatcggcg gtagcaaata aaggcaaatg tcgggacggc
      841 gcaatcggcg cggcagtcgg cgagatggtg ggagaaaccc tgttggacgg acgcgatgta
      901 ggcaaactgt caccccaaga acgccaaaaa gtcatagcct actcgcagat tatcgcaggc
      961 agcgtagtgg cattggttaa aggggatgtg aatacggcgg cgaatgcggc tactgtggca
     1021 gtggagaata atagtctttt agctcgcagg agggtaaata tacgttggac tccgcgacaa
     1081 gaattggaac atgaatatgc cattcttgaa atccaggcca ttaccaatca aatccgaagg
     1141 ctggatccga aatttaacgg gattgctatt ctgaggactc ctggagagcc gtggacaaga
     1201 catgatgtac aaacatacag gcaatattat aatcaattaa gggaatccag aggctttgct
     1261 gttgacccaa tttatagaat caggataaac aacggcaatg aatttaaccg tatcatgtca
     1321 tcaaaatacc cttataatga gctttatgta gccaatccta aatcggcgac ggggtatttt
     1381 agggtagatt cgtataatcc tgcgacagag gaaattattt caagaaaatt tacccaattt
     1441 tctcaaatcc aagaaagtac ggggattggt tatatcaagg aggctgttag aaaatatagc
     1501 cctggtgctg tcatttccaa tgttccaagt acacctacta cgataagagg aaga
//
LOCUS       DBBZXW010000195         1497 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.195, whole genome shotgun sequence.
ACCESSION   DBBZXW010000195 DBBZXW010000000
VERSION     DBBZXW010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.195"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            30..1424
                     /locus_tag="ACJJD2_002117"
     CDS             30..1424
                     /locus_tag="ACJJD2_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
                     /protein_id="HGG7580569.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVFPSIRYEADSATDFTGIPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNERHSFGAGIIAQHTSAELRKYADWGIPKKAQMLQATPSNPTAAAQIKADGHA
                     DVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADDAMAKQLWNSNM
                     LAPLGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFEKE
                     KTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMNSL
                     PDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARFKN
                     HADIIGLQYTYKFK"
BASE COUNT          397 a          495 c          342 g          263 t
ORIGIN      
        1 ccaccgtccg cctttttacg gaaaccgaaa tgaccccttc cgcactgaaa aaaaccgtcc
       61 tgctgctcgg cactgccttt gccgccgcat ccgcacaagc ctccggctac cacttcggca
      121 cacagtcggt caacgcgcaa agcacggcga atgccgccgc cgcagaagcc gccgacgcat
      181 cgaccatctt ctacaacccc gccggcctga ccaaactcga cagcagccag atttccgtca
      241 acgccaatat cgtatttcca agcatccgtt atgaagcgga ttccgccacc gactttaccg
      301 gcattcccgt ccaaggttcg aaaagcggca aaatcaccaa aaccacggtt gcgccccaca
      361 tctacggcgc atacaaagtc aacgacaatc tgaccgtagg cttgggcgtg tacgtcccct
      421 tcggctctgc caccgaatac gaaaaagatt ccgtattgcg ccacaacatc aacaaactcg
      481 gtctgaccag catcgccgtc gaacccgtcg ccgcgtggaa actcaacgaa cgccattcct
      541 tcggcgcagg catcatcgcc caacatactt ctgccgagct gcgcaaatat gccgactggg
      601 ggatcccaaa aaaagcgcaa atgctgcaag caacaccttc taatcctact gccgctgctc
      661 aaatcaaagc cgacggacac gccgatgtca aaggcagcga ttggggcttc ggctaccaac
      721 tggcgtggat gtgggacatc aacgaccgcg cacgcgtggg cgtgaactac cgttccaaag
      781 tctcacacac gctcaaaggc gatgccgaat gggcggcaga cgacgcaatg gcgaaacaac
      841 tgtggaatag caatatgctc gcaccgctcg gctacacggc gaatgaaaaa gcccgcgtta
      901 aaatcgttac gcctgagtct ttgtccgtac acggtatgta caaagtgtcc gataaagccg
      961 acctgttcgg cgacgtaact tggacgcgcc acagccgctt cgataaggcg gaactggttt
     1021 ttgaaaaaga aaaaaccatc gtcaacggca aatccgaccg caccaccatc acccccaact
     1081 ggcgcaacac ctacaaagtc ggcttcggcg gttcttatca aatcagcgaa ccgctgcaac
     1141 tgcgcgccgg catcgctttt gacaaatcgc ccgtccgcaa cgccgactac cgcatgaaca
     1201 gcctgcccga cggcaaccgc atctggttct ccgccggcat gaaataccat atcggcaaaa
     1261 accacgtcgt cgatgccgcc tacacccaca tccacatcaa cgacaccagc taccgcacgg
     1321 cgaaggcaag cggcaacgat gtggacagca aaggcgcgtc ttccgcacgt ttcaaaaacc
     1381 acgccgacat catcggcctg caatacacct acaaattcaa ataaacggcc cgccgtttga
     1441 ttgtagaaat gccgtctgaa acagatttcc gtttcagacg gcattgtttt aggctcg
//
LOCUS       DBBZXW010000196         1481 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.196, whole genome shotgun sequence.
ACCESSION   DBBZXW010000196 DBBZXW010000000
VERSION     DBBZXW010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.196"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..259
                     /locus_tag="ACJJD2_002118"
     CDS             <1..259
                     /locus_tag="ACJJD2_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BRCT domain-containing protein"
                     /protein_id="HGG7580570.1"
                     /translation="EAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGKVS
                     GSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            316..>1481
                     /gene="hemW"
                     /locus_tag="ACJJD2_002119"
     CDS             316..>1481
                     /gene="hemW"
                     /locus_tag="ACJJD2_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HGG7580571.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALESAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQ"
BASE COUNT          365 a          458 c          375 g          283 t
ORIGIN      
        1 cgaggcggcg caaggttcag acggcatcaa taaagccgta gcaggcaaaa cctttgtatt
       61 aaccggcacc ctgcccacgc tcaaacgcga ccaagcccaa tccctaatcg aagccgcagg
      121 cggcaaagtt tccggcagcg tgtccaaaaa aaccgactac gtcgtcgccg gagaagccgc
      181 gggcagcaag ctggaaaaag ccaatgcctt gggcgtttcc gtcctcagcg aagccgaact
      241 gcttaccctg ctcggctgaa cctatgccgt ctgaaccgcc ttcagacggc attgtccact
      301 tttccgaacc acaccatgca caccatttcc tttccaaacc gcacccgact caccgccctg
      361 ccgcccctgt cgctttacat ccacatcccg tggtgcatca aaaaatgccc gtattgcgac
      421 tttaattccc acagcctgaa aaacggattg cccgaagccg cctatatcga cgcgctgctg
      481 accgacttgc agctcgaatt gcccaatatt tggggcaggc cggtggaaac gatctttttc
      541 ggcggcggta cgcccagcct gtttcaggcg gaatcgattg accgtttatt gagcggcgtg
      601 cgttcgctgt tgcgcttgca gccggaagcg gaaattacct tggaagccaa tccggggaca
      661 tttgaaatcg agaagtttca aggatttaaa gacgcaggca tcacgcggct ttctattggt
      721 gtacagagtt tcaacgacga tatgctctca aggctggggc gcgtccacaa cggcaaggaa
      781 gccttaaccg ctatcgatac cgccttgaaa ttatttgata aagtcaatat cgacttgatg
      841 tatgccctgc cgaaccaaac cgttcagacg gcattggacg acgtacaaac cgctatcgct
      901 acgggcgcga cccacatcag cgcgtatcat ctgacgatgg aaccgaacac gccgttcggt
      961 catacgccgc cgaaaggttt gccgcaagac gaagccgccc tcgacatcga agacgcggta
     1021 cacggcgcgc tggaaagcgc gggttttgtc cactacgaaa catcggcttt tgcgaaacca
     1081 gccatgcagt gccgccacaa tttgaactac tggcagttcg gcgattattt aggcataggc
     1141 gcgggcgcgc acggcaaaat ttcctatccc gaccgcatcg agcgcaccgt ccgccgccgc
     1201 caccccaacg actacctcgc cttaatgcaa aaccgaccga gcgaagccgt cgaacgcaaa
     1261 accgtcgccg ccgaagattt gccgtttgag ttcatgatga acgccctgcg cctgaccgac
     1321 ggcgtacccg ccgcgatgtt gcaggaacgc acgggcgtac cgagtgccaa aatcatggcg
     1381 caaatcgaaa cagcaaggca aaaaggcctg ctggaaaccg accccgccgt attccgcccg
     1441 accgaaaaag gacgcttgtt tttaaacgat ttgctgcaat g
//
LOCUS       DBBZXW010000197         1481 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.197, whole genome shotgun sequence.
ACCESSION   DBBZXW010000197 DBBZXW010000000
VERSION     DBBZXW010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.197"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(10..576)
                     /locus_tag="ACJJD2_002120"
     CDS             complement(10..576)
                     /locus_tag="ACJJD2_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HGG7580572.1"
                     /translation="MSLYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGS
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMREGLSGKAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVMVAVGLTAGRALGVLF
                     GRRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          354 a          404 c          362 g          361 t
ORIGIN      
        1 tttccgacat cattgaatca aacccaaatg cgacaagagc gtccatgtac cgatggcaat
       61 caacaccaaa cctccggcaa attccgcacg cctgccgaac aatacgccca aagcccttcc
      121 cgccgtcagc ccgaccgcca ccatcaccgt cgtcgccata ccgatgattg cggcggcaaa
      181 ggcgatgttt acctccataa acgccaagcc caccccgact atcatggaat caatactggt
      241 tccaaaagca gtcaaaaccg tcatccatag gctttcccgt ttgctttcgc gcacatcttc
      301 cgccttgccg gacagccctt cgcgcatcat tttcagaccc agcccgccca gcaggacgaa
      361 agccgcccaa tggtcccatt cgctgataaa cggtttggca taaaaaccgc ctacccagcc
      421 tgccagcggc gtgagtgctt caaccgagcc gaacaccaag gctgttgctg caattttgcg
      481 cggaggcatc ctgaccgccg caccctttgc caatgcgacg gcaaacgcat ccatcgacat
      541 ccccagcgca atcaagagca aagcgtaaag actcataccg cacccatcct caaaaagggc
      601 agattatagc aaaacagcaa agcgcgaaaa acgccgcacg aaaacccaca tcccgtcatt
      661 cccgcgcagg cgggaatcca gagttgtcgg tgcggaaact tatcgggaaa aacggtttct
      721 ttagatttta tagtggatta acaaaaacca gtacagcgtt gcctcgcctt ggctcaaaga
      781 gaacgattct ctaaggtgct gaagcaccga gtgaatcggt tccgtactat ctgtactgtc
      841 ttcggcttcg tcgccttgtc ctgatttttg ttaatccatt atatgaatcg tcattcccgc
      901 gcaggcggga atccagagtt gtcggtgcgg aaacttattg gataaaacgg tttctttaga
      961 ttttacgttc tggattccca ctttcgtggg aatgacggga ttttggtttc cgtgcggatg
     1021 gattcgtcat tcccgcgcag gcgggaatcc aaagttgtcg gtgcagaaac ttatcgggaa
     1081 aaacggtttc tttagatttt acgttctgga ttcccacttt cgtgggaatg acgagatttt
     1141 ggtttccgtg cggatggatt cgtcattccc gcgcaggcgg gaatccagag ttgtcggtgc
     1201 ggaaacttat cgggaaaaac ggtttcttta gattttacgt tctagattcc cactttcgtg
     1261 ggaatgacgg gattttggtt tccgtgcgga tggattcgtc attcccgcgc aggcgggaat
     1321 ccaggtctgt cggtgcggaa acttatcgga taaaacggtt tctttagatt ttacgttcta
     1381 gattcccgct ttcgcgggaa tgacgggatt ttggtttccg tgcggatgga ttcgtcattc
     1441 ccgcgcaggc gggaatccag agttgtcggt gcggaaactt a
//
LOCUS       DBBZXW010000198         1444 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.198, whole genome shotgun sequence.
ACCESSION   DBBZXW010000198 DBBZXW010000000
VERSION     DBBZXW010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.198"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..217)
                     /locus_tag="ACJJD2_002121"
     CDS             complement(<1..217)
                     /locus_tag="ACJJD2_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HGG7580573.1"
                     /translation="MTYANFNINGFGDVKLTPYSPLLGYKAWDSFIGSIQSLSDLIYN
                     VDNNRNKMEITVNNAIQAADSFLSSNWK"
     gene            1252..>1444
                     /locus_tag="ACJJD2_002122"
     CDS             1252..>1444
                     /locus_tag="ACJJD2_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin B"
                     /protein_id="HGG7580574.1"
                     /translation="MAIVSTPHPALSALIILAHYHGIAAKSLGLKAKVVRQPVKRLAM
                     VTLPALVWCDDGNHFKEKWL"
BASE COUNT          496 a          267 c          199 g          482 t
ORIGIN      
        1 tcttccaatt actgcttaaa aagctatctg cagcttgaat agcattatta acagtaattt
       61 ccattttatt tctattgtta tccacattat agattaaatc agataaggat tgaatagaac
      121 caataaatga atcccaagct ttatatccca agagtggtga atagggtgtt aatttcacat
      181 ctccaaaacc gttaatatta aaatttgcat atgtcatatc tgctttcctt tcaagtaaat
      241 taaaaaaata acgtgaggaa ttaaaattaa aaataaatta attatcgact caatataata
      301 tgaatcaatt agctctctta tggtaaatat aagaggtaaa aatactaaaa ataaactaat
      361 aaagttcaga aaaatagtaa atggaatatt ttcatatgga aaaattctac aaaatacaag
      421 taatattcca tgacatatta gcaaatgagt aaaatttatt ataaaatata taaatatttc
      481 cccatcgtaa gatatattca aataaagaaa tataaacaat atgaagtata taaaatatat
      541 tttttggcat ctaaaaaata aacttttagc aatcatatat aaatagcttg tagaataaaa
      601 aacgaaaatt attaattatc gtaggtgtgc atttattcca acacggtttc atgcagctta
      661 aaaaccaaaa attctttctc cctttatcct ttcttaaaaa tagcgttttc aaattctgca
      721 acgacaggtt tcattcaagt aggactgccg tgattgcatc aattgcttcg cggcatggca
      781 tccatatcac acaacaggac atttattctc gggtaagtcc accttcatcc tcttccgcca
      841 gcaggaacag ttacaggcta cctaaaatat gctctgtgct cggatagtaa atatttcctt
      901 tctcactatt gtttgtcatt taatcgacag tctactcttt ctctaaaatt tcgtcaataa
      961 tagttaaata tatttaaata catttaaaat aataatatac acctgtttca gtctgtctaa
     1021 aacacgggaa aatatgttat ttgatcacaa cggtgacttt gggcagcctg taccttcaat
     1081 aacgcgtgga aaatagatat atacttatat cgtattcgag gctgtcttgt ttccctcaaa
     1141 caaccattct tccacacttt tgctttacaa ttttcgtgtg tatccttaca attaccccta
     1201 ttgtttttgt atattccttt gccaaccgtt attgctatcc aatctaatat tatggctatc
     1261 gtatctacac cacaccccgc tctttccgcc ctcatcatcc tcgcccatta tcacggcatt
     1321 gccgccaaat ctttgggatt gaaggcaaag gtagtacgcc agcctgtcaa acgtttggct
     1381 atggtgacct tacctgcatt ggtatggtgt gatgacggca accattttaa ggaaaagtgg
     1441 ttgt
//
LOCUS       DBBZXW010000199         1410 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.199, whole genome shotgun sequence.
ACCESSION   DBBZXW010000199 DBBZXW010000000
VERSION     DBBZXW010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.199"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(44..367)
                     /locus_tag="ACJJD2_002123"
     CDS             complement(44..367)
                     /locus_tag="ACJJD2_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7580575.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(386..595)
                     /locus_tag="ACJJD2_002124"
     CDS             complement(386..595)
                     /locus_tag="ACJJD2_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HGG7580576.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFFRN"
     gene            complement(718..>1410)
                     /gene="truA"
                     /locus_tag="ACJJD2_002125"
     CDS             complement(718..>1410)
                     /gene="truA"
                     /locus_tag="ACJJD2_002125"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HGG7580577.1"
                     /translation="ALETALAQIAGEFVATTVAGRTDTGVHATAQVVHFDTTAVRPQQ
                     AWVRGVNAHLPEGIAVLHARQVAPEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWT
                     HLKLDIEPMRRAAAYLIGEQDFSSFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGN
                     AFLHHMVRNIMGALVYVGSGRLSVEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEA
                     YGIIRPKIPEWL"
BASE COUNT          319 a          336 c          397 g          358 t
ORIGIN      
        1 tgttaatcca ctataatgaa cacaatccat tcagactatt caatcaggca aacatctcct
       61 gcaatactgc aaacagtttt tcagccgtac tgttgtctaa attgccaaga tgcttgacca
      121 atccggcttt atccacagcc ctaatctgtt cgggcaaaag caaaccgtct ttatcctgaa
      181 agcggacatt gacgcggaac ggggcaggac ggcttccgct cgtcatggga acgatcagca
      241 cagtcttgag atagttgtgt atttcaggag gagagactac gacacaagga cgtgtctttt
      301 tgatttcgct tcctacggtc gggtctaagg agaccagata gattccgccg cgtactacca
      361 tatccattct ttatccgctt cgttttcaat ttcggaaaaa aaaatgctcc tgctcggttt
      421 cgacaagcat tgcggcagct tctgcccatc ccctgcgaac ggtaggacag cttaaaataa
      481 tattgccctt ttcaactgta acagccaagc tgtctactgc ccctatttga cccaataatg
      541 atttgggcag aatcacgcct tgcgagtttc ccattttgcg tatgttgaga atcatatacg
      601 taccctattt accagtttat gtaataacaa tgttattacc ttgatgaggt agtgtcaaca
      661 ttgaaaaaga ttgcctgaca gtttgtccga tttcaaaatc tccgcgacaa gaatgtttta
      721 aagccattcg gggattttgg ggcggatgat gccgtatgcc tcgggatagt cgacgccggt
      781 caggtaaagc ccgtcgggca tgaaggttgg tggggctttg aggcggctgc gttcttgaat
      841 cagtgcggcg aagccttcga cgctgagcct gccgctgccg acataaacga gcgcgcccat
      901 gatgttgcgt accatatggt gcaaaaaggc gttgccgtgc aaatcgaggc ggacgagtcc
      961 tgcgctttgg gtaaggtcgg cgcggtagat ggttttgacg ggggattttg cctggcactc
     1021 ggcggcgcgg aagctggaga agtcttgttc gccgatcaaa taggcggcag cccgacgcat
     1081 cggttcgatg tcgagtttga ggtgtgtcca gcctgccctg tttttgagca ggggggaacg
     1141 gacgggggcg gattcgagca ggtagcggta gtgtcgtccg tatgcgtcaa atcgtgcatg
     1201 aaattcgggg gcgacctgtc gagcatgcaa aacggcaatt ccttcgggca ggtgggcatt
     1261 tacgccgcgc acccatgcct gttggggacg gacggcagtt gtgtcaaagt ggacgacttg
     1321 ggcggtggcg tgcacgccgg tatcggttct gccggcaacg gtggtggcga caaattctcc
     1381 tgcgatttgg gcgagtgcgg tttccaatgc
//
LOCUS       DBBZXW010000200         1406 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.200, whole genome shotgun sequence.
ACCESSION   DBBZXW010000200 DBBZXW010000000
VERSION     DBBZXW010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.200"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..468
                     /locus_tag="ACJJD2_002126"
     CDS             <1..468
                     /locus_tag="ACJJD2_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HGG7580578.1"
                     /translation="PVGALSKAKAAKQAIPTQTVKELDGLLQESKNIGAVNTRINIAN
                     STTRYTPMRQTGQPVSAGFEHVLEGHFHRPIANNRSVFTISPNELKVILQSNKVVSSP
                     VSMTPDGQYMRTVDVGKVIGTTSIKEGGQPTTTIKVFTDKSGNLITTYPVKGN"
     gene            475..984
                     /locus_tag="ACJJD2_002127"
     CDS             475..984
                     /locus_tag="ACJJD2_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580579.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
     gene            1053..>1406
                     /locus_tag="ACJJD2_002128"
     CDS             1053..>1406
                     /locus_tag="ACJJD2_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HGG7580580.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAP
                     RLLPSFTDPVVPKLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQ
                     VQLAYDKWDYKQEGLT"
BASE COUNT          476 a          271 c          261 g          398 t
ORIGIN      
        1 ccagtaggag cgttgtcgaa agcgaaggcg gctaagcagg ctataccaac ccagacagtt
       61 aaagaacttg atggcttact acaagaatca aaaaatatag gtgctgtaaa tacacgaatt
      121 aatatagcga atagtactac tcgatataca ccaatgagac aaacgggaca accggtatct
      181 gctggctttg agcatgttct tgaggggcac ttccataggc ctattgcgaa taaccgttca
      241 gtttttacca tctccccaaa tgaattgaag gttatacttc aaagtaataa agtagtttct
      301 tctcccgtat cgatgactcc tgatggccaa tatatgcgga ctgtcgatgt aggaaaagtt
      361 attggtacta cttctattaa agaaggtgga caacccacaa ctacaattaa agtatttaca
      421 gataagtcag gaaatttgat tactacatac ccagtaaaag gaaactaact aaatatgagt
      481 aactttgaaa aaaaatatat tttagaatta aatgatgctt taagccattt aaatcataac
      541 tctacctcat ttgatttatt gaaagttttg atttcatggt tatcaaacga tattgtcatt
      601 gataaattta aaattttagg ttatgacttt agtaaatata tcgaaatgaa tcccgatgac
      661 tatccggttg aaaaatctat attgaataga gaggaaatta tttatctcaa aaacaatatt
      721 tatcgtaaaa tatcatcagg aaattttaaa tttcaatact ttgtacaata tattagagat
      781 attttagaat atttatttat tgaacatatt gaaagagtct gtccttactg cgaatggggt
      841 gaaatgcaaa aattagaaga acaaaatacg catgaaacgg tgtatctctg tactcaatgt
      901 ggatgtgctt tttataacga taattcacaa tttttattaa aaaccccttt aaccattcca
      961 atgaaacgtg atgaatttaa ataaacaagc cgtagcctgc atgaacccta aaatccacgt
     1021 gtagcgtgtg tgcgccagca cgcatgcgtt ccatgattta cggctcaatg ccgtctgaaa
     1081 agctcacaat ttttcagacg gcatttgtta tgcaagtaaa tattcagatt ccctgtatgc
     1141 tgtacagacg cgggagtgtt aagcccccct tgtttgaagc tccgcggctc ctgccgagct
     1201 tcaccgaccc cgttgtgccc aagctctctg ctcccggcgg ctacattgtc gacatcccca
     1261 aaggcaatct gaaaaccgaa atcgaaaagc tggccaaaca gcccgagtat gcctatctga
     1321 aacagctcca agtagcgaaa aacgtcaact ggaaccaggt gcaactggct tacgataaat
     1381 gggactataa gcaggaaggc ttaacc
//
LOCUS       DBBZXW010000201         1403 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.201, whole genome shotgun sequence.
ACCESSION   DBBZXW010000201 DBBZXW010000000
VERSION     DBBZXW010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.201"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(41..1033)
                     /gene="porB"
                     /locus_tag="ACJJD2_002129"
     CDS             complement(41..1033)
                     /gene="porB"
                     /locus_tag="ACJJD2_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HGG7580581.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSVEHNGGQV
                     VSVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFVQYGGAYKRHQDVDDVKIEKYQIHRLVSG
                     YDNDALHASVAVQQQDAKLVEDNYSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFD
                     DADLSNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGENKFVSTAGGVGLRHKF"
BASE COUNT          319 a          323 c          366 g          395 t
ORIGIN      
        1 gtctggcgac aggctttttg ttgataccaa tctttgcaga ttagaatttg tggcgcagac
       61 cgacaccgcc ggcagtcgat acgaatttgt tttcgccttt gccttcttgc aaccaaccgg
      121 cagaaaccaa ggcagaagtg cgtttggaga agtcgtattc cgcaccgaca accacttggt
      181 cgtaatcgtt gcttaagtct gcatcatcaa acgagccttt gaagccgtgg gcgtaagaaa
      241 cgcggggcgt tacgttgccg aagcggtatg ccaaggtagc ggcaacttcg gtttgagagt
      301 tgtgcgaata attgtcttca accaatttgg catcttgttg ctgtacggct acggaagcgt
      361 gcagggcatc attgtcgtaa ccgctgacca aacggtgaat ctggtatttt tcaatcttca
      421 cgtcatccac atcctgatgt cttttatagg caccgccata ttgcacgaag aagccgccgt
      481 ttttgtagtt gaagccggcg tggtaagatt cgctgttatg tctgcctgca ttgtcgttaa
      541 gcgcgtattg tacgctgccg ctgaggccgg caaattcggg agaatcgtag cgtacggaaa
      601 tgaggcgtgc ttcgggttcg gcaattttgt ttacacccaa atagtcgctt ttgctatccc
      661 aaggattgat gtcgccggtg tctttcagga cgctgttcaa acggccgacg cgcaatttac
      721 cgaagccgcc tttcaaaccg atgaaggatt ggcggttgcc ccaaccggag tcagtgccgg
      781 cgatagatgc cttttgctca acctgccaaa tggctttcag accgttgccg aggtcttctt
      841 ggcctttgaa gccgattttc gaacccaaat caacgatgcc ggtaccggtt tcaacgctaa
      901 ccacctgacc tccattgtgc tctacagagc gggaagtttc tacgccggct ttgatggtgc
      961 cgtacagggt aacgtcagcc attgctgcaa caggaagggc tgccaaagtc agggcaatca
     1021 gggatttttt cattgctgta ttcctttttt ggttaagaaa tttaagcagg ccgggctttc
     1081 caagccgctt agctttgcat ttaccgccga cgttttcggc gattccatgt ctgaaactat
     1141 agatgttcct gtctgaaaaa acaaacttct gcctgttttt gtgtggaatt cgatgtgtat
     1201 tttgaagggc ggatagagat attgtgggta ttttttgttt tataacatat ggttatttaa
     1261 attttttaag atttgcattt ttacaacact tactcgggag ggtattggag ggcattgcaa
     1321 accgggggtt ataaagacgg caaaaaacgc gcacgtggtt tctttcggaa cgggcggatg
     1381 caaaacccgc ccctgcggca gga
//
LOCUS       DBBZXW010000202         1373 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.202, whole genome shotgun sequence.
ACCESSION   DBBZXW010000202 DBBZXW010000000
VERSION     DBBZXW010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.202"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(28..699)
                     /locus_tag="ACJJD2_002130"
     CDS             complement(28..699)
                     /locus_tag="ACJJD2_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7580582.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNTVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMERGRGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          335 a          307 c          315 g          416 t
ORIGIN      
        1 ggggttttgg ggaattttgc aaaggtctca gtctatgccc gatatacaat tttgatacac
       61 aaacttggaa atatcggtat cgtcgccgga gcgatagaat gcggacagtt tttcattgaa
      121 ttgcggcatc tgcatttcgg agatttccaa gatgccacgg cctctctcca tcatcagacc
      181 attggcaaat aaggttgccg ttcgtttgtt gccgtcccaa aaaacctgct gccgcataca
      241 ataaagcata aaacggacgg ctgcctccgt cgtcgaaccg ctttgcagtc cgatattttg
      301 taacacgcgg gccacttcaa tttccttcac tggattcggg gcatgacggg aaccgtccaa
      361 tagcgttacg ccgaccgaac cggtacggaa atcaccgggt gccaaagaat cgtccttggc
      421 aacagtgttg ttgatttttt taaggagtga aatatcgacc ggttcgccgt ttgaaatatg
      481 cgaaatcaca tattgatagg cacgtttcag gttcaagatg gtttggatgt cttccagtga
      541 cgcggaggct acatttttgc catggataat ttgttcggtc tgcaacaagg tcgtctgaca
      601 attctcaaaa cggctgaggt tgtgaatttg ggcaaccaat actttctttg ccaaaaaaat
      661 attttctttc aaactcaact tgtatttgtc gggaaacacg ataattcctt aaataattaa
      721 agcagtacgt taaatcatca tcttatcatc actttcgggg tttatgttgc gtgcgtccgt
      781 tttctaatac ggtttcccat cccgcgaaac gaggcggagg cctgtgcaaa aaacctgttc
      841 acgaaatttt ccgcattaac gatacgctga aaatgcgcta aaaatgactg tgtttgaata
      901 tcggttgatt tcatccgttt gtgtaacctc gcgccggttt tgtcatgatt ttgcattata
      961 gtgaattaaa tttaaaccag tacagcgttg cctcgcctta ccgtactatc tgtactgtct
     1021 gcggcttcgt cgccttgtcc tgatttttgt taattcacta tatttttgtc atgcggatat
     1081 ttcacgggat gacaaaacgg gcgcaaaaaa gcccgattgg aaaatccgaa tcgggctttt
     1141 ttgtgatgtt ctgttcgatt tgcgtactaa ctgccggccg gagcgtccgc gcccggtttg
     1201 gcaggtcgga ttctcgaatc cgacggctat ttgagatggc aggcttttgt cggatacaag
     1261 tatccgacct acggcttgct tttcgtcatt cccgcgaaag cgggaatcta gaatctcgga
     1321 ctttcagata atctttgaat attgctgttg ttctaaggtc tagattcccg cct
//
LOCUS       DBBZXW010000203         1348 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.203, whole genome shotgun sequence.
ACCESSION   DBBZXW010000203 DBBZXW010000000
VERSION     DBBZXW010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.203"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(262..525)
                     /locus_tag="ACJJD2_002131"
     CDS             complement(262..525)
                     /locus_tag="ACJJD2_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580583.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(544..>1348)
                     /locus_tag="ACJJD2_002132"
     CDS             complement(544..>1348)
                     /locus_tag="ACJJD2_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7580584.1"
                     /translation="DGAIGAVVGEIVGEALVKNTDFSGMTASEIEKAKANITAYAKLV
                     AGATVGVTGGNVDVAANASETAVKNNALDIIWDIGNLVWDGGKWIYAKSIGDKQMARE
                     AAIDFGVDAAAAAVPFVPAGATKISRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTY
                     DKVNKVWTTPAGLDYGLDAKHGNRIKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEA
                     WRMKGNPLPNDSSVYLVDMKKPIGTKGETKVRIVVQKGTNKIISAYPQK"
BASE COUNT          362 a          327 c          225 g          434 t
ORIGIN      
        1 ttggctgttt gggcgataac gcgtacgggc agtttggttt cgttcagctc gtttttgctg
       61 taattgcttt tacccacttt gatgccgatg aaacgggtac ttttctgaac attcaattgg
      121 tgttggtgaa tgccttcggc tgccagcagt tgcattgagg ccgtctgaaa aacggatatt
      181 cagacggcct attgctactt taaataatat ttgggtttaa aatatcatcg tatttcccaa
      241 attcggggaa cagaaaatca attatttaaa tttttcatcc tcataatatg ggtgatcaaa
      301 aagctctcct tcccacatat ttatttcttc tatgccttta tctttcataa actcatgata
      361 atcataaaaa tcttttccat attgtccgta aaaaattttc atatccccaa gccacatagc
      421 ataacattca tcgcataaaa tgacctcccc agagaaatat ttaggctttg catgataaag
      481 gtagccttgc tcacatcttg ggcaaatttt aatttcttta tccataagag attcctttct
      541 taattatttc tgaggatatg cagaaatgat tttatttgtt cctttttgca caacaatccg
      601 cacttttgtt tctccttttg ttccaatagg tttcttcata tctacaagat atacggatga
      661 atcatttggc aaaggatttc ctttcattct ccaagcttca tcaaccaaag gcaaaacttc
      721 tttacgggac acattaaaaa cagaatgaac aggtttgttt ggatttggaa ttgtatgggc
      781 taaaacatgt ttaatcctat taccatgctt agcatctaac ccataatcta accccgccgg
      841 tgttgtccaa accttattaa ccttatcata agtaagcttg attccggtct gcttctgaat
      901 ttcctgtatg gctttagccg tatcaactgc ttcgtctccc gccttcagaa cataagcccc
      961 gcctcggctg attttagtcg cacctgccgg aacaaaggga acggcagctg cggcggcatc
     1021 cacaccaaaa tcaatcgccg cttctcgagc catctgctta tcgccaatag atttggcgta
     1081 aatccattta ccgccgtccc atacgaggtt gccgatatcc caaataatat ctaatgcatt
     1141 atttttaaca gctgtttcgg aagcatttgc cgccacatca acattgcctc ctgtaacacc
     1201 tacagtcgct ccggctacca attttgcata cgcagtaata ttcgctttag ctttttcaat
     1261 ttcagaagca gtcataccgc tgaaatcggt attcttaacc aaagcctccc cgacaatctc
     1321 ccccacgacc gcaccaatcg cgccgtcc
//
LOCUS       DBBZXW010000204         1305 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.204, whole genome shotgun sequence.
ACCESSION   DBBZXW010000204 DBBZXW010000000
VERSION     DBBZXW010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.204"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..894
                     /locus_tag="ACJJD2_002133"
     CDS             <1..894
                     /locus_tag="ACJJD2_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HGG7580585.1"
                     /translation="PQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFA
                     EDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENT
                     FDDGIGNSARLAHGAVFGQYGIDRFYIGISAGAGFSSGSLSDGIGGKIRRRVLHYGIQ
                     ARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLSFNRYRAGIKADYSFKPA
                     QHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFMLSLHAA
                     AAKGPQLEAQHSAGIKLGYRW"
BASE COUNT          298 a          425 c          311 g          271 t
ORIGIN      
        1 ccgcaacccc aaccgcagcc ccaaccgcag cgcgacctga tcagccgtta tgccaatagc
       61 ggtttgagtg aattttccgc cacgctcaac agcgttttcg ccgtacaaga cgaattagac
      121 cgcgtatttg ccgaagaccg ccgcaacgcc gtttggacaa gcggcatccg ggacaccaaa
      181 cactaccgtt cgcaagattt ccgcgcctac cgccaacaaa ccgacctgcg ccaaatcggt
      241 atgcagaaaa acctcggcag cgggcgcgtc ggcatcctgt tttcgcacaa ccggaccgaa
      301 aacaccttcg acgacggcat cggcaactcg gcacggcttg cccacggcgc cgttttcggg
      361 caatacggca tcgacaggtt ctacatcggc atcagcgcgg gcgcgggttt tagcagcggc
      421 agcctttcag acggcatcgg aggcaaaatc cgccgccgcg tgctgcatta cggcattcag
      481 gcacgatacc gcgccggttt cggcggattc ggcatcgaac cgcacatcgg cgcaacgcgc
      541 tatttcgtcc aaaaagcgga ttaccgctac gaaaacgtca atatcgccac ccccggtctt
      601 tcgttcaacc gctaccgcgc gggcattaag gcagattatt cattcaaacc ggcacaacac
      661 atttccatca cgccttattt gagcctgtcc tataccgatg ccgcttcggg caaagtccga
      721 acacgcgtca ataccgccgt attggctcag gatttcggca aaacccgcag tgcggaatgg
      781 ggcgtaaacg ccgaaatcaa aggtttcatg ctgtccctcc acgctgccgc cgccaaaggc
      841 ccgcaactgg aagcgcaaca cagcgcgggc atcaaattag gctaccgctg gtaaccgccg
      901 gatatgccga aaggggtctg acgatgccac cgtgcgctgt caaacccttt ttctgccgcc
      961 gccttgtgcc tgctccattg tctgataacc gtcaaattga tttttagccc atgtttggtg
     1021 ggtcggggaa atctatatct tcgtccgtgc cgaaatagtc tgagaccttt gcaaaattcc
     1081 tttccctccc gacagccgaa acccaaacac aggttttcgt ctattttcgc cccaaatacc
     1141 tcctaattct acccaaatac ccccttaatc ctccacggac acccgataat caggcatccg
     1201 ggctgctttt taggcggcag cgggcgcact tagcctgttg gccgctttca aaaggttcaa
     1261 acacatcgcc ttcagatggc tttgtgcact cactttgctc agccc
//
LOCUS       DBBZXW010000205         1284 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.205, whole genome shotgun sequence.
ACCESSION   DBBZXW010000205 DBBZXW010000000
VERSION     DBBZXW010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.205"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..519
                     /locus_tag="ACJJD2_002134"
     CDS             <1..519
                     /locus_tag="ACJJD2_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580586.1"
                     /translation="PVGALSKAKAAKQAAPKETINNLANLAKAEQQILFRIAQRDTQL
                     DAWKTGFNNRVRKGAGLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALY
                     RQMTGQNPNFRVLPDGRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPS
                     FIKGTKLELKFQ"
     gene            538..912
                     /locus_tag="ACJJD2_002135"
     CDS             538..912
                     /locus_tag="ACJJD2_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HGG7580587.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
BASE COUNT          418 a          247 c          271 g          348 t
ORIGIN      
        1 cctgtggggg cgttgtcgaa agcgaaggcg gccaagcaag ctgctcctaa agaaacaata
       61 aacaatttgg caaatttagc caaagcagaa cagcagattt tattccgtat tgcccaacgc
      121 gatacgcaac tggatgcatg gaagacggga tttaacaata gagtaaggaa aggagcaggc
      181 ttgcttgatg caagtaatat tccgataacc attaacggaa aaaccatcaa acctgtacaa
      241 gccataagct taaagggagc acccgtttac agcggcgtaa gcgaacagga gatttttgcg
      301 ctttatcggc agatgactgg ccagaatccg aattttagag ttttgcctga cggaagatta
      361 gcaaatggca ttatcagtac tggagaatgg gcaggaacaa aaattgcatt aagaaatttt
      421 tcaaaaacag agaattcaac tcaagcacga tggacattag atttgcagaa tcctccatca
      481 tttattaaag gtactaaatt ggagcttaaa ttccaataat ttacaaagga ttttaccgtg
      541 gatgagaaac aaaaaattaa gattcttgat tttcaaatcg atttatcctc aatttttaac
      601 tcttataaaa atcaaatggg tattaatatt caagataaaa acttaaaaaa caatttctgt
      661 tcttttatgg aagaactgtt aaatgacggt tcaatccgtt tacatgatta taccgacggt
      721 atcggaattc ctctaactgg aacttcaaaa gaacaagtgc agaaattgaa agacatatgg
      781 cctactttgg aagatgccca agcaatatgg cctgaagacc cttggtatta cttagaatgg
      841 ctttggtggg atattgcgtg tccaatagat ttggccgatt tgccgaatat tgatatttat
      901 gagcaagcgt aggtatggtt agccgccttt agcggcgtaa ccgtacgcat atcagcaaac
      961 tttataaaat aacaaggccg tctgaaatct gtttttcaac tttttcagac ggccttgcaa
     1021 cttggcattt cattcgtacg gttacgccgc taaaggcggc taaccgtacc tacgagctct
     1081 gataaaaatg atttatggaa gcaagctgta gcctgcatga aacctaaaat ccatgcgtaa
     1141 ggtgtgtgct tcagcgcgca cgcgttccat gatttacggc tcaatgccgt ctgaaaagct
     1201 caattttttc agacggcatt tgttatgcaa gtaaatattc agattcccta tatactgccc
     1261 agacgcgtgc gtgctgaaga cacc
//
LOCUS       DBBZXW010000206         1235 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.206, whole genome shotgun sequence.
ACCESSION   DBBZXW010000206 DBBZXW010000000
VERSION     DBBZXW010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.206"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>1235
                     /gene="pilC"
                     /locus_tag="ACJJD2_002136"
     CDS             <1..>1235
                     /gene="pilC"
                     /locus_tag="ACJJD2_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7580588.1"
                     /translation="AKELRAFAEKGYVGDRYGVDGGFVLRQVEWKGQNRVFMFGAMGL
                     GGRGAYALDLTKAENGDPTAVSLFDVKNDKNKGNNSAELGYTVGTPQIGKTHDGKYAA
                     FLASGYATKTIDSTDNKTALYVYDLESSGTLIKKIDVPGGKGGLSSPTLVDKDLDGTV
                     DIAYAGDRGGSMYRFDLKDWSVRTIFSGNKPITSAPAISQLKDKRVVIFGTGSDLSEE
                     DVLNTDEQYIYGIFDDDTAASNVDVKLKGLGGGLLEQVLEQKDKTLFLTDYKRSDGSG
                     NKGWVVKLKDGQRVTVKPTVVLRTAFVTIRKYKDNGCGAETAILGINTADGGKLTKKS
                     ARPIVPDTNTAVAQYSGHKKGTNGKSIPIGCMQKGNEIVCPNGYVYDKPVNVRYLDEK
                     KTDGFSTTADGDAGGSGIDP"
BASE COUNT          338 a          304 c          344 g          249 t
ORIGIN      
        1 gccaaagagc tgcgcgcctt tgccgaaaaa ggctatgtgg gcgaccgcta cggcgtggac
       61 ggcggctttg tcttacgcca agtcgaatgg aaagggcaaa accgcgtgtt tatgttcggc
      121 gcgatgggcc ttggcggcag aggtgcgtat gccttggatt tgaccaaagc cgaaaacggt
      181 gacccgaccg ccgtttccct gtttgatgtc aaaaatgaca aaaataaagg caataatagt
      241 gcagaattag gctacaccgt cggcacgccg caaatcggca aaacccacga cggcaaatac
      301 gccgctttcc tcgcctccgg ttatgcgact aaaaccattg acagcacaga caataaaacc
      361 gcgctgtatg tgtatgattt ggaaagcagc ggtacgctga ttaaaaaaat cgatgtaccc
      421 ggcggcaagg gcgggctttc gtcccccacg ctggtggata aagatttgga cggcacggtc
      481 gatatcgcct atgccggcga tcgcggcggc agtatgtacc gctttgattt gaaagactgg
      541 tctgtacgca ccattttcag cggcaacaaa ccgattactt ccgcgcccgc tatttcccaa
      601 ctgaaagaca aacgcgtggt tatcttcggc acgggcagcg atttgagtga ggaggatgta
      661 ctcaatacgg acgaacaata tatttacggt atctttgacg acgatacggc ggcgagtaat
      721 gtagatgtaa aactcaaagg tttgggaggc gggttgctcg agcaggtgct tgagcagaag
      781 gataaaacct tattcctgac cgattataag cgatccgacg gctcgggcaa taagggctgg
      841 gtagtgaaat tgaaggacgg acagcgcgtt accgtcaaac cgaccgtggt attgcgtacc
      901 gcctttgtaa ccatccgcaa atataaagac aacggctgcg gcgcggaaac cgccattttg
      961 ggcatcaata ccgccgacgg cggcaagctg accaagaaaa gcgcgcgccc gattgtgccg
     1021 gacaccaata cggctgtcgc gcaatattcc ggccataaga aaggcaccaa cggcaaatcc
     1081 atccctatag gttgtatgca aaaaggcaat gaaatcgtct gcccgaacgg atatgtttac
     1141 gacaaaccgg ttaatgtgcg ttatctggat gaaaagaaaa cagacggatt ttcaacaacg
     1201 gcagacggcg atgcgggcgg cagcggtata gaccc
//
LOCUS       DBBZXW010000207         1229 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.207, whole genome shotgun sequence.
ACCESSION   DBBZXW010000207 DBBZXW010000000
VERSION     DBBZXW010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.207"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..813
                     /locus_tag="ACJJD2_002137"
     CDS             <1..813
                     /locus_tag="ACJJD2_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580589.1"
                     /translation="ENNTLYPRCVGAKCDEFQKEQQKWIRENPEEYREVLLLQTGFIP
                     IIGDIQSFVQAQTAADHLFALLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVA
                     TAQGYVSKTKIKIGQTELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRV
                     LSGGKYGGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSREWIKQV
                     VKSLPDGSPAKAVVLKANQNGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            816..>1229
                     /locus_tag="ACJJD2_002138"
     CDS             816..>1229
                     /locus_tag="ACJJD2_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HGG7580590.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPESIDYVDEKKGVP
                     LAAMKYILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILQSVDDEDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAF"
BASE COUNT          395 a          228 c          291 g          315 t
ORIGIN      
        1 gagaataata ctttgtatcc tagatgcgtt ggtgcaaagt gtgatgaatt tcaaaaggaa
       61 caacaaaaat ggatacgtga aaatcctgaa gaatatcgag aagttttgct tcttcagaca
      121 ggatttattc caattatcgg tgatatacag agttttgtac aagcacagac cgctgccgat
      181 cacctgtttg ctttgctggg tgtggttccg ggtatcggtg aatcgataca ggcctataaa
      241 gtagcgaaag cggcaaaaaa tttacaaggc atgaaaaaag ccttggacaa ggcagcaacc
      301 gttgccactg cacagggcta tgtcagtaaa accaaaatca aaatcggtca aactgaatta
      361 agggttactg cagcaactga caaacaattg ctgaaagcta ttggcgaagg aagggacacg
      421 acaggtaaaa tgaccgagca gttatttgac tctttagcta aacaaaatgg cttcagagtg
      481 ctttcgggcg gcaaatacgg cggaaataac ggttttgatc atgtatggca ggctgccgat
      541 ggtagtgttg ttttgattgt agaaagtaag cagattagga acggtacggt acagctgaat
      601 ccgaatggtg cgggtggata tacgcagatg agtcgtgaat ggattaaaca agttgtaaaa
      661 agtttacctg atggtagtcc tgctaaggca gttgtcttaa aagcaaatca gaacggcaaa
      721 ttaaaaacgg caatagcagg cgttgatcgt caaacaggta aggccgttat tctttctgtc
      781 aaagttcctt ctaaaaccaa tataaggaga taacaatggg gcacaatatg atgaccaccc
      841 aaaaatggta tgaacatatt actaatgtaa tcataggcaa tactgctaat ttcaatagcg
      901 gttgccccga atctatagat tatgtagatg aaaaaaaagg cgtgccgctt gcagcgatga
      961 aatacatttt aatgtacact gaagctgcgg cttcccatgc ctatctattt gaacatgatc
     1021 ttaagaaatt caagcaatat gcttatgttg caggaaagtt gggtattttg cagagtgtag
     1081 atgatgaaga ccccgaaccc ttcttctttc cctgcgacat gctcaacatt caagatccga
     1141 tgtttctgat gctgatgagc gacagcccgc agctgcgcga gtttttggtg cgcaatatcg
     1201 acaacatcgc caacgataca gaagccttc
//
LOCUS       DBBZXW010000208         1168 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.208, whole genome shotgun sequence.
ACCESSION   DBBZXW010000208 DBBZXW010000000
VERSION     DBBZXW010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.208"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>1168
                     /locus_tag="ACJJD2_002139"
     CDS             <1..>1168
                     /locus_tag="ACJJD2_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7580591.1"
                     /translation="VIIVTALTYGYGAAAAGSVTAAGSSTAAAATTTAAATTTVSTAA
                     AMQTAALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSALTAGALNQMGADI
                     AQLNSKVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNGGSLKDNLGNAAL
                     GALVNSFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKDGAIGAAVGEIVA
                     ESILGGRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAAEVAVVNNALNFD
                     STPTNAKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNPQDKDAAIWISNIRNGITGPI
                     VITSYGVYAAGWTAPLIGTAGKLAISTCMANPSGCTVMVTQAAEAGAGIATGAVT"
BASE COUNT          329 a          280 c          314 g          245 t
ORIGIN      
        1 tggtgattat tgtaaccgct ctaacttatg gatacggagc ggctgcagcg ggtagcgtaa
       61 ctgccgcagg aagtagtaca gccgcagctg caacaacgac agcggcagca actaccactg
      121 tttctactgc agctgccatg caaaccgcag ctttagcctc cttgtatagc caagcagctg
      181 tagccatcat caataataaa ggcgatgtag gcaaagcatt aaaagatctc ggcaccagtg
      241 atacggtcaa gcagattgtt acttccgcac tgacggcggg tgcattaaac cagatgggag
      301 cagatattgc ccaattgaac agcaaggtaa gaaccgaact gttcagcagt acgggcaatc
      361 aaaccattgc caaccttgga ggcagattgg ccaccaacct cagcaatgca ggtatctcag
      421 ctggtatcaa taccgccgtt aacggcggca gcttgaaaga caacttaggc aatgccgcat
      481 tgggagcatt ggttaatagc ttccaagggg aagccgccag caaaatcaaa acaaccttca
      541 gcgacgatta tgttgccaaa cagttcgccc acgctttggc gggttgtgtt agcggactgg
      601 tacagggaaa atgtaaagat ggggcaattg gcgcagcagt tggggaaatc gtagctgaat
      661 ccatacttgg cggcagaaac cctgctacac tcagcgatgc agaaaagcat aaagttatca
      721 gttactcgaa gattattgcg ggcagcgtgg cggcactcaa cggcggcgat gtgaatactg
      781 cggcgaatgc ggctgaggta gctgtggtga ataatgcttt gaattttgac agcaccccta
      841 ccaatgcgaa aaagcatcaa ccgcagaagc ccgacaaaac cgcactggaa aaaatcatcc
      901 aaagtattat gcctgcacat gcggcaggtg cgatgactaa tccgcaggat aaggatgctg
      961 ccatttggat aagcaatatc cgtaatggca tcacaggccc gattgtgatt accagctatg
     1021 gagtttatgc agcaggttgg acagctccgc tgatcggtac agcgggtaaa ttagctatca
     1081 gcacctgtat ggctaatcct tctggttgta ctgtcatggt cactcaggct gccgaagcgg
     1141 gcgcgggaat cgccacgggt gcggtaac
//
LOCUS       DBBZXW010000209         1159 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.209, whole genome shotgun sequence.
ACCESSION   DBBZXW010000209 DBBZXW010000000
VERSION     DBBZXW010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.209"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..784
                     /locus_tag="ACJJD2_002140"
     CDS             <1..784
                     /locus_tag="ACJJD2_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HGG7580592.1"
                     /translation="TFGRHDIPFQFFDALMPSEELNRVMAELVPGLAKQHLLSEVEKA
                     CFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLAEDTWLEERFDKDSAFIVRLE
                     TMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISREAMRFFLERFAVLPAEWIKA
                     VDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKNSMLGSDLEKDREQERRHRRS
                     LKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRVISFK"
BASE COUNT          321 a          223 c          300 g          315 t
ORIGIN      
        1 taccttcggc aggcacgaca ttccgtttca gtttttcgac gcactgatgc cgtctgaaga
       61 actgaatcgg gtgatggcgg aattggtgcc gggattggca aaacagcacc tgttgagcga
      121 agtggaaaaa gcctgcttta tgagccacgc cgtattgtgg aaacaggcat tggatgaagg
      181 tctgccctat gttgccgtat ttgaggatga tgtcctgctt ggcaaagacg cagaaaagtt
      241 ccttgccgaa gatacttggt tggaagagcg ttttgataag gattctgcct ttatcgttcg
      301 tttggaaacg atgtttgcga aagttattgt cagaccggat aaagtcctga attatgagaa
      361 ccggtcattt cctttgctgg agagcgaaca ttgggggacg gctggctata tcatttcgcg
      421 tgaggcgatg cggtttttct tggaaaggtt tgccgttttg ccggcagagt ggattaaagc
      481 ggtagattgg atgatgttta cttatttctt tgataaggag gggatgcctg tttatcaggt
      541 taatcccgcc ttatgtaccc aagaattgca ttatgccaag ttcctcagta aaaacagtat
      601 gttgggtagc gatttggaaa aagataggga acaagaaaga agacaccgcc gttcgttgaa
      661 ggtgatgttt gacttgaagc gtgctttggg taaattcggt agagaaaaga agaaaagaat
      721 ggagcgtcaa aggcaggcgg agcttgagaa agcttacggc aggcgggtca tatcgttcaa
      781 atagtttgtg taaaatatag cggattaaaa ttagaaatgg atacactgtc attcccgcga
      841 aagtgggaat ccagtccgtt gagtttcagt catttccgat aaatcaccgc aacgttaaat
      901 ttctagattc ccgcttttgc gggaatgacg gcgggggatt tctgtttttc cgacaaattc
      961 ctaaaactta aaattccgtt attcccgcga aaacagaaaa ccaaaaacag aaacctaaaa
     1021 tctcgtcatt cccgcaaaaa cagaaaacca aaaaacagca acctaaaatt cgtcattccc
     1081 gcgcaggcgg gaatctagtc cgttcggttt cgcttgtttt aagtttcggg caacttccac
     1141 tttgtcattc ccgcgcagg
//
LOCUS       DBBZXW010000210         1155 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.210, whole genome shotgun sequence.
ACCESSION   DBBZXW010000210 DBBZXW010000000
VERSION     DBBZXW010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.210"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(258..1112)
                     /locus_tag="ACJJD2_002141"
     CDS             complement(258..1112)
                     /locus_tag="ACJJD2_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HGG7580593.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWNVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT          321 a          341 c          298 g          195 t
ORIGIN      
        1 cctgattttt gttaatccac tataaaatcc cgtcattccc gcgcaggcgg gaatctggac
       61 atccaacgct gcagcaattt gtcggaaata accgaaactc aaaaaaccgg atgcccgcct
      121 gcgcgggaat gacgatgcaa agatggtcgt tatttcggat aaatatccgt cttttcgttc
      181 cggatacccg ctttcgcagg aatggagatg gaaagatttc agcctattcg gcaatcatca
      241 aataccgctt cccaacttta tttttgatgc gacagccggc cggcaaccaa ggtggcggcg
      301 atgacgacaa acacgcccaa ggcggacacg ggcgacaggt gttcgcccaa aatcaaaacc
      361 gccagcagca cgccgacgac gggttcgagc gaaatcaaca gtcccgaaac gttggcagga
      421 acacggctca tccccttgtt ccacagccaa taggcgtacc agccgcaccc caagcccaaa
      481 tacagcagcg acaataccat cccgacgttc cagtccacgg tataactttg cgccaaagca
      541 agcgaaaacg gcaggcacat caacgatgcg gcggcaatgg aaacagatgt gaatgccggt
      601 gcgccgatgc gtgcaatcag cctttgcgtc ggacgcatag cggcacaaaa gcccgcgccc
      661 gccaacaaca ccagcaggca gccgaaccag ccgacttcgc cgccctcttc cgcaccgccc
      721 gccatcagca gcgcgacacc ggcaaatgcc gccgcgccgc atatccagtg gtaggcacgc
      781 gctttgtcgt tgaagaaaaa gtgtccgaca aacaccatca gcagtggctc gagtccgaca
      841 atgaccgatg cgctggcggc ggaagtgtat ttcaacccga caaactgaag cagcagggtc
      901 agcacatagt tgacgaacga cacaatcagc aacggcttcc attcctcacg cggaatcttg
      961 ccgacatgac ggcggcaggc gggcagtgca ggcagcgcag caatcagcag gcgcacgccg
     1021 accatcaatg cgggatcgat gccgccatag acatatttgg cggcaataaa cgagctgctc
     1081 cagataatca gggcaaggat ttggtaaaac atagtgagtg ataaagtcag atggtcatac
     1141 aaaagtatag cggat
//
LOCUS       DBBZXW010000211         1103 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.211, whole genome shotgun sequence.
ACCESSION   DBBZXW010000211 DBBZXW010000000
VERSION     DBBZXW010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.211"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..266
                     /locus_tag="ACJJD2_002142"
     CDS             <1..266
                     /locus_tag="ACJJD2_002142"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580594.1"
                     /translation="GAVAGQVLDVVSFALGQLRVAHGNLSCRKGRMLPHTGLFLLGKV
                     ALQMRIRHRPKCSLGMLLDYRPYNRKKGRKVERLLFKFKRPSK"
     gene            complement(339..491)
                     /locus_tag="ACJJD2_002143"
                     /pseudo
     CDS             complement(339..491)
                     /locus_tag="ACJJD2_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            647..>1103
                     /locus_tag="ACJJD2_002144"
     CDS             647..>1103
                     /locus_tag="ACJJD2_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR-type extended signal peptide-containing
                     protein"
                     /protein_id="HGG7580595.1"
                     /translation="MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSDSGSAHVKSV
                     PFGTTHAPVCRSNIFSFSLLGFSLCLAVGTANIAFADGIIADKAAPKTQQATILQTGN
                     GIPQVNIQTPTSAGVSVNQYTQFDVGNRGAILNNSRSNTQTQLGGWIQGN"
BASE COUNT          327 a          230 c          232 g          314 t
ORIGIN      
        1 acggtgcagt ggcgggacag gtattggatg tggtatcgtt cgccttgggt cagttgcgtg
       61 tagctcatgg caatctttct tgcaggaaag gccgtatgct accgcatact ggcctttttc
      121 tgttagggaa agttgcactt caaatgcgaa tccgccaccg tccaaaatgc tctttgggaa
      181 tgctattgga ttatagacct tacaacagaa aaaaaggtcg gaaagtagaa agactgcttt
      241 ttaaattcaa acggccaagc aagtaaagac ttggccaaca aatgggacaa aatccgactg
      301 ttttaaattg ccagtcaaat actggaaaac ttgcgtaaat ggctaaattc actgacatca
      361 agtacatcat aactacgaaa ggtatccgta tacacaatgc catcagactt aactttctct
      421 cggataatcg gcaataatgt tgctgattgc gcattaggga caacgacggt ataaaccttg
      481 ccatttcgtt cgaatgggat ttttaaccgt tatctagtaa agtccctaat ttaataaaca
      541 aatggcagta aaatggcggt aattgactcg ccaaaatcct tgatctagaa tggtcagact
      601 atccaatttt ttctaataac tctataaaaa tcaaataact gaaatcatga ataaaactct
      661 ctatcgtgta attttcaacc gcaaacgtgg ggctgtggta gccgttgctg aaactaccaa
      721 gcgcgaaggt aaaagctgtg ccgatagtga ttcaggcagc gctcatgtga aatctgttcc
      781 ttttggtact actcatgcac ctgtttgtcg ttcaaatatc ttttcttttt ctttattggg
      841 cttttcttta tgtttggctg taggtacggc caatattgct tttgctgatg gcattattgc
      901 tgataaagct gctcctaaaa cccaacaagc cacgattctg caaacaggta acggcatacc
      961 gcaagtcaat attcaaaccc ctacttcggc aggggtttct gttaatcaat atacacagtt
     1021 tgatgtgggt aatcgcgggg cgattttaaa caacagccgc agcaacaccc aaacacagct
     1081 aggcggttgg attcaaggca atc
//
LOCUS       DBBZXW010000212         1082 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.212, whole genome shotgun sequence.
ACCESSION   DBBZXW010000212 DBBZXW010000000
VERSION     DBBZXW010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.212"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            284..721
                     /locus_tag="ACJJD2_002145"
     CDS             284..721
                     /locus_tag="ACJJD2_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VapD"
                     /protein_id="HGG7580596.1"
                     /translation="MSRYLITFDMDTNCLKDNYHGNNYTNAYSDIKTILARHGFENIQ
                     GSVYLGREGISEAHGTIAIQELTARFDWFYSCISNIKFYRLESDLNAQFIADGVYQAK
                     QAFLQRVEQLRISLTEAGLSDEQINQVLEKQKFELESPNLKLN"
BASE COUNT          338 a          248 c          219 g          277 t
ORIGIN      
        1 gccaccaaaa cccttgctag ctaagggtta aacagctcac ttgaaatcta cttaagtcta
       61 atctaaacta tccaatatgg atagattttt aaacataggg caagcagcaa aattattgta
      121 gctgaaagca caatcactcg ctggtggtct caaacacgtg ccgactacct cgccgaaaac
      181 actatcagcc gcgataaacc gtgggaaaag ctcgttatca gccgccgcac ttggtactat
      241 cgcgggaaac cgatgctgtc tgaaacgcaa caggagaaaa ataatgagcc gttacctgat
      301 tacctttgat atggatacca actgcctgaa agacaattac cacggaaata actataccaa
      361 tgcctactcc gatattaaaa ccatcttggc tagacatgga tttgagaaca ttcagggcag
      421 tgtttatcta ggccgtgaag gcatcagtga agcacacgga acaatagcca ttcaggaact
      481 gaccgctcgg tttgattggt tttactcctg tatttcaaac attaagtttt accgccttga
      541 aagtgatttg aacgcacaat ttatcgctga tggtgtgtat caagccaaac aggctttcct
      601 tcaacgtgtt gaacaacttc gtatatccct aacagaagct ggattgtctg atgagcaaat
      661 caatcaggtt ctggaaaaac agaaatttga attggaaagt cctaacctga aattaaatta
      721 acctccttta ctcaccaaca tccgccgcag ctctgtcagt ttttggcgcg ctgcggcgat
      781 ttctgtgcgt tttagagctt cgggtagggt gtgaaacaac tcactcgaaa tttacttaag
      841 tctaatctaa actatccaag cagtaattag tacaaaaaag gcaaacttat tttaggagct
      901 taaaattgca gccgcgataa accgtgggag agtctcggca tttcccgcgc cacttggtac
      961 aaacgtggca aaccgatgcc gtctgaaacc gtacaacagg agacaaaata atgcttgctc
     1021 aaatcgaact cacaccctgc cagctaatgg tttacgtaac ttaaggttac tggatttacg
     1081 ca
//
LOCUS       DBBZXW010000213         1057 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.213, whole genome shotgun sequence.
ACCESSION   DBBZXW010000213 DBBZXW010000000
VERSION     DBBZXW010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.213"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            238..>1057
                     /locus_tag="ACJJD2_002146"
     rRNA            238..>1057
                     /locus_tag="ACJJD2_002146"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          292 a          216 c          324 g          225 t
ORIGIN      
        1 tgctgcagaa gcggcggacg aactgaaaag tatagcacag aatgttgggg atatcgagag
       61 atatcttgac aggcggaagg aatactttat aattcgcaac gctctttaac aaaacagatt
      121 accgataagt gtgagtgcct tgagcctcac actgtttgaa agacagacaa gataatgttt
      181 tgaacattgt cctgttggtt tctttgaagc agaccagaag ttaaaaagtt agagattgaa
      241 cataagagtt tgatcctggc tcagattgaa cgctggcggc atgctttaca catgcaagtc
      301 ggacggcagc acagagaagc ttgcttcttg ggtggcgagt ggcgaacggg tgagtaacat
      361 atcggaacgt accgagtagt gggggataac tgatcgaaag atcagctaat accgcatacg
      421 tcttgagaga gaaagcaggg gactttcggg ccttgcgcta ttcgagcggc cgatatctga
      481 ttagctggtt ggtggggtaa aggcctacca aggcgacgat cagtagcggg tctgagagga
      541 tgatccgcca cactgggact gagacacggc ccagactcct acgggaggca gcagtgggga
      601 attttggaca atgggcgcaa gcctgatcca gccatgccgc gtgtctgaag aaggccttcg
      661 ggttgtaaag gacttttgtc agggaagaaa aggctgttgc taatatcagc ggctgatgac
      721 ggtacctgaa gaataagcac cggctaacta cgtgccagca gccgcggtaa tacgtagggt
      781 gcgagcgtta atcggaatta ctgggcgtaa agcgggcgca gacggttact taagcaggat
      841 gtgaaatccc cgggctcaac ccgggaactg cgttctgaac tgggtgactc gagtgtgtca
      901 gagggaggta gaattccacg tgtagcagtg aaatgcgtag agatgtggag gaataccgat
      961 ggcgaaggca gcctcctggg acaacactga cgttcatgcc cgaaagcgtg ggtagcaaac
     1021 aggattagat accctggtag tccacgccct aaacgat
//
LOCUS       DBBZXW010000214         1034 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.214, whole genome shotgun sequence.
ACCESSION   DBBZXW010000214 DBBZXW010000000
VERSION     DBBZXW010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.214"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(299..685)
                     /locus_tag="ACJJD2_002147"
     CDS             complement(299..685)
                     /locus_tag="ACJJD2_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HGG7580597.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGTSARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(682..927)
                     /locus_tag="ACJJD2_002148"
     CDS             complement(682..927)
                     /locus_tag="ACJJD2_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HGG7580598.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMGNTDISRILEDDNETAALFEESAL"
BASE COUNT          279 a          244 c          184 g          327 t
ORIGIN      
        1 cagccatata tattaagtac ctgctcttta tgcgcttttt taggaaagga agatcaaacg
       61 gttcaatagc gaagtcttgc ccaaatttga tggacaggat atagaataca tgcgtgcata
      121 ccacaccctg ccaaagttgg gagatgcact taaggttgca cttgtggtcg ccaactatgc
      181 ctatacacgc ggatttcccg cgtttatagg ccgcgacgga agtctggctt ttaagcgaag
      241 acaataaccg aaaagaccgc ctcggcggtc tttcttgtgt acacagtttt tatatttgtc
      301 agcttgatgc attgacaact ctaattccat attgcggaat atattcatcg acagtcatca
      361 gttcaaagcc ttccgcttgg gtttgtgcaa tcaacatcct atcgaaaggg tctttgtgta
      421 tttccggaag gcttccagcc tgttttgcat gaaacagacc tataggcagc atttcaaaat
      481 cctcttcttg aagcacatca aaaaactctt ccggtaattt caacaacccc ttgttctgct
      541 tgatggaaat ttcccaaata cttgctgcac tgacaaagat cgcatttctc ggattttcta
      601 tcagtttgcg tgcagatgtc cccagtttct tgtcatccaa caaccaccac agcaaagcat
      661 gggtatcaag cagaatcttt ctcacagagc cgactcctca aataaagctg ccgtttcatt
      721 gtcatcctca agaatacgtg aaatatccgt atttcccata tgactgaatt ttttcaacct
      781 tcctgcattt cgtgccggtt tttcaatacc ggttagttgg acgcaaggct tacctgcttt
      841 cgcaataata acgatttccc ctgcttctgc tctttgaatc aattgactca aattggtttt
      901 tgcctgatga atatttgctt gaaacataac acttctcatg attagctaac ttaactaata
      961 tacatcatta ccaagatttt gggaatctca ttacatatat ttgattatat ccgccgtttt
     1021 attcacacct tgct
//
LOCUS       DBBZXW010000215         1007 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.215, whole genome shotgun sequence.
ACCESSION   DBBZXW010000215 DBBZXW010000000
VERSION     DBBZXW010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.215"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..448)
                     /gene="mafA"
                     /locus_tag="ACJJD2_002149"
     CDS             complement(<1..448)
                     /gene="mafA"
                     /locus_tag="ACJJD2_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7580599.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNG"
     gene            complement(571..960)
                     /locus_tag="ACJJD2_002150"
     CDS             complement(571..960)
                     /locus_tag="ACJJD2_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580600.1"
                     /translation="MWKITKEQGQDLSFATYCLLSAAINLQEFKLWLEKVVLDMPIDN
                     IHFYIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALTGIAFLRGIDVYDPPVSKEK
                     ALKALKKHPEIYQRFQHFFPFVELPPL"
BASE COUNT          239 a          199 c          279 g          290 t
ORIGIN      
        1 tgccgttgac ggacagtccg gcggagcgtt cgcctttgcg tccgctgttt ctagtcaggg
       61 cggcggcggg ggcgtttaag agcgatgtgg aagtggttac gctggagagc gcgtcggatt
      121 tggtggtggc ggtagtgtcg taggcggggt agctgtattg ggtggcactt tcggggttgt
      181 tgtggtagcc accgcgtatc agtgcgtcga tagagtagcg tccgccgctt atgttgcccg
      241 aaccttggtc gcccataacg gagacgtaaa gggcggcttt gcgtcctttc agggcggaca
      301 aatccatttc tttgacggcg gcgcgggacg atgcggcgac gagttcctgt tcgacggcaa
      361 agcgtttgcc gccgccgtgg gcgggtatgc cggtcagtgt gccgcaggcg gttaggacga
      421 gggggatgag gaggagcagg gttttcatag cggggtttgt ttgatgttga acggattttg
      481 agtgtaaagg gattttaagg gtttgtaaac aaaaggggcg aaaatgccgt ctgaacggcg
      541 gaacggtctt tcagacggca ttttgactgt ttaaagcggg ggcagttcta caaacggaaa
      601 gaaatgctga aacctctgat aaatttcagg atgtttcttt aaggctttta atgctttttc
      661 ttttgaaacg ggagggtcat agacatctat accccttaag aaggcaatgc ctgttaatgc
      721 gtcatcttgg tctttagata agtctgaatt cggaacaaaa tccaaaatat tataaatatc
      781 tcctactcct tctttaagat caattaaatc aaaaatataa aaatgtatat tatcaatagg
      841 catatctaag acaaccttct ccaaccataa tttaaattct tgcaaattaa ttgctgccga
      901 taataagcaa tatgttgcaa aacttaaatc ttgaccttgc tctttcgtaa ttttccacat
      961 aattatcttc ctttgccgtc aaacgctctt ttggttacct gctttgt
//
LOCUS       DBBZXW010000216          986 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.216, whole genome shotgun sequence.
ACCESSION   DBBZXW010000216 DBBZXW010000000
VERSION     DBBZXW010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.216"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..485
                     /gene="mnmC"
                     /locus_tag="ACJJD2_002151"
     CDS             <1..485
                     /gene="mnmC"
                     /locus_tag="ACJJD2_002151"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HGG7580601.1"
                     /translation="GLHCYGASFIPNSSHTGWNEAEEASNRQALAHLNPALAESLFAA
                     NPNPQKYQGHAAIRCDSPDHLPLVGALGDIAAMRQTYTKLALDKNYRIDTPCPYLPNA
                     YVNTAHGTRGLATAPICAAAVAAEILGLPHPLSKRLRHALHPNRTIIRAIVRRKDLTP
                     "
     gene            complement(599..716)
                     /locus_tag="ACJJD2_002152"
                     /pseudo
     CDS             complement(599..716)
                     /locus_tag="ACJJD2_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
BASE COUNT          264 a          314 c          188 g          220 t
ORIGIN      
        1 acggactgca ctgctacggc gcgagtttta ttcccaacag cagccatacc ggatggaacg
       61 aagccgaaga agcctcaaac cgccaagcat tggcacacct taaccccgcc cttgccgaat
      121 cattgtttgc cgccaaccca aacccccaaa aataccaagg gcacgccgcc atacgctgcg
      181 acagccccga ccaccttccc ctagtcggcg cactcggcga cattgccgcc atgcggcaga
      241 cctacaccaa actcgcgctg gacaaaaact accgcatcga caccccatgc ccatacctgc
      301 ctaatgccta cgtcaacacc gcccacggca cacgcgggct tgccaccgcc cccatctgcg
      361 ccgccgccgt tgcagccgaa atcctaggct tgccccatcc cctctcaaaa cgcctgcgcc
      421 acgccctaca ccccaaccgc accatcatcc gcgccatcgt cagaaggaag gatctaaccc
      481 cttaagcctt tgccgcatgc cgtcccgacc acagaaaatc atattcaaat aaacatacca
      541 atcctgacgg taaaatatcg aaaacaccca taacgttttc ttcccaaaat aaggagtaag
      601 gaatgcctaa caaattgcct ttgctgtcta agatgaatgt tccgtaacat tcgaagactt
      661 ccttaaccct gccagccgtt tcggtttctg taccccctgt tagataagga aggaatgaaa
      721 aagccctgtt gattgtatga agtaaagggc gttaattttt gttaatcttc ccttctcagg
      781 aactcaatat ataaggatgt taatttttat ttcccttctc gaggactcaa tatagtggat
      841 taacaaaaac cagtacggcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg
      901 ctgaagcacc aagtgaatcg gttccgtact atttgtactg tctgcggctt catcgccttg
      961 tcctgatttt tgttaatcca ctatag
//
LOCUS       DBBZXW010000217          975 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.217, whole genome shotgun sequence.
ACCESSION   DBBZXW010000217 DBBZXW010000000
VERSION     DBBZXW010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 975)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 975)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.217"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..472
                     /gene="mafA"
                     /locus_tag="ACJJD2_002153"
     CDS             <1..472
                     /gene="mafA"
                     /locus_tag="ACJJD2_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7580602.1"
                     /translation="LLANPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFG
                     TVRSRTELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPY
                     SVGKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            476..>975
                     /gene="mafB"
                     /locus_tag="ACJJD2_002154"
     CDS             476..>975
                     /gene="mafB"
                     /locus_tag="ACJJD2_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HGG7580603.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASEEKGSVNEGFTVYRLNWKGHEHHPADGYDGPQGGNYPKPTGA
                     RDEYTY"
BASE COUNT          261 a          364 c          211 g          139 t
ORIGIN      
        1 cctgctcgcc aacccccgcg acgtttcctt cctgaccaac ctcatccaaa ccgtcttcta
       61 cctgcgcggc atcgaagtcg taccgcccga atacgccgac accgacgtat tcgtaaccgt
      121 cgacgtattc ggcaccgtcc gcagccgcac cgaactgcac ctctacaacg ccgaaaccct
      181 taaagcccaa accaagctcg aatatttcgc cgttgaccgc gacagccgga aactgctgat
      241 tgcccctaaa accgccgcct acgaatccca ataccaagaa caatacgccc tctggatggg
      301 accttacagc gtcggcaaaa ccgtcaaagc ctcagaccgc ctgatggtcg atttctccga
      361 catcaccccc tacggtgaca caaccgccca aaaccgtccc gacttcaaac aaaacaacgg
      421 taaaaacccc gatgtcggca acgaagtcat ccgccgccgc aaaggaggat aaaccgtgaa
      481 accgctgcgc agactgacaa acctccttgc cgcctgcgcc gtagcggccg ccgccttcgg
      541 acagcccgcc ctcgcggcgg acttggcgca agacccgttc attaccgata acgcccaacg
      601 gcagcactac gaacccggag gcaaatacca cctcttcggc gacccgcgcg gcagcgtttc
      661 cgaccgcacc ggtcaaatca acgtcatcca agactatacc caccagatgg gcaacctgct
      721 catccaacag gcaaacatca acggcacaat cggctaccac acccgctttt ccggacacgg
      781 acacgaagaa cacgccccct tcgacaacca cgccgccgac agcgcaagcg aagaaaaagg
      841 cagcgtcaac gaaggcttta ccgtataccg cctcaactgg aaagggcacg aacatcatcc
      901 cgccgacggc tatgacggcc cgcagggcgg caattacccc aaacctacgg gcgcacgaga
      961 cgaatacacc tatca
//
LOCUS       DBBZXW010000218          975 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.218, whole genome shotgun sequence.
ACCESSION   DBBZXW010000218 DBBZXW010000000
VERSION     DBBZXW010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 975)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 975)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.218"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..614)
                     /locus_tag="ACJJD2_002155"
     CDS             complement(<1..614)
                     /locus_tag="ACJJD2_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HGG7580604.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDSALQKGWQ
                     KGLHSVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAENWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPISLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLNLASDGTISTEPMKGTAPILG"
BASE COUNT          236 a          224 c          295 g          220 t
ORIGIN      
        1 tcgcccaaaa tcggcgcggt gcctttcatc ggttcggtgc tgatggtgcc gtctgaagcg
       61 aggttgagga agagttcggg cgagaaacac agcgtccacg cggattgccc ctccgcatcg
      121 ggcaggtggg acaagacggc ataggggacg ggctggcgca ggcggcggta gaggctgatg
      181 ggattgccgt aggcttgcag gtgcaggcgg gtggtgtagt tgatttgata ggtgtcgccg
      241 cgccggatgg cttcgtggat ttggcggata tggtcgaggt aatcggcttc ggatacggag
      301 gattgcggcg tggaaatgcc ggcggggagg ccgtctgaat gtcgggcaag ccagttttcg
      361 gcatcggtgt cggcgcagtc ggcaaaccag tgcagggcaa gattgccgcc gcgttcggac
      421 tcgacccccg tcagcggcaa accgaatccg tagtctgcaa acaacaccga atgcagccct
      481 ttttgccagc ccttttgcag cgcgctgtcc aaagcatcga gttcttcggg acggaaaaaa
      541 cggctttcca catgattttg atagcgtttt gcgcggccgc ttacggcatc gtcaaacagg
      601 gcgaaataag gcatggcaat tcggggcaaa tgttttgatt atacgctctt tttacacata
      661 ttttcagacg attcggcaaa tatcggcaaa atgtaatttt atgtagagaa agtggggggc
      721 gaaggtgtaa aattgtgaaa acaaattccg atttccaacc tgaaatacaa taaggagacc
      781 tttatgacag accaccagct gcaaccgttt gaaaacgtag aattaggcga aaagcaagac
      841 cagctccaag tatagtggat taacaaaaac cagtacagcg ttgcctcgct ttagctcaaa
      901 gagaacgatt ctctcaggtg ctgaagcacc aagtgaatcg gttccgtact atctgtactg
      961 tcttcggctt cgttg
//
LOCUS       DBBZXW010000219          942 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.219, whole genome shotgun sequence.
ACCESSION   DBBZXW010000219 DBBZXW010000000
VERSION     DBBZXW010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.219"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..471)
                     /locus_tag="ACJJD2_002156"
     CDS             complement(<1..471)
                     /locus_tag="ACJJD2_002156"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7580605.1"
                     /translation="MKIILTTSMSGLGGTETATVRLGRLLKRRGHDIILASSDGPFVG
                     EAQASGIRWQPVDFYRGGLAGYLKSTFAYARMLRREQPDIIDCQMARVVPACALAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPAGRIA"
     gene            complement(468..>942)
                     /locus_tag="ACJJD2_002157"
     CDS             complement(468..>942)
                     /locus_tag="ACJJD2_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HGG7580606.1"
                     /translation="PENYAAVRFIVVSCMLPPLFCTLVEISGIGLNVVRKTRPIALAT
                     LGALAANLLLLGLAVPSGGARGAAVACATSFWLFFAFKTESSCRLWQPLKRLPLYTHT
                     LLCLTSSAAYTCFGTPANYPLFAGVWAVYLAGCILRHWKDLHKLFHYLKKQGFPL"
BASE COUNT          201 a          251 c          312 g          178 t
ORIGIN      
        1 ggcaatccgg ccggcgggga agccgtggcg gatgagtttt tcgcgctcgt gtttacagtt
       61 gccgatgatg tacacgccca gcttgtcgaa gagcttggcg attttggggt aggttgccgc
      121 gtccaaaccg tgcgagtggt agatgatttt ggttttcggc gaaacgattt tggcggcaag
      181 ggcgcaggct ggaacaacgc gcgccatttg gcagtcgatg atgtcgggtt gttcgcggcg
      241 cagcatccgg gcgtaggcaa aggtgctttt gaggtagccg gcaagcccgc cccggtaaaa
      301 atcaaccggc tgccaacgga tgcccgatgc ttgcgcctct ccgacaaaag gcccgtccga
      361 agaagcaagg atgatgtcgt gcccgcgccg tttgagcagc cgcccgaggc ggacggtggc
      421 ggtttccgtg ccgcccaagc ccgacataga agtggtcagg atgattttca taatggaaac
      481 ccttgttttt tcaaataatg aaacagtttg tgcaaatctt tccagtggcg caggatgcag
      541 cctgccagat ataccgccca tacgccggca aacagggggt agtttgccgg tgtgccgaag
      601 caggtgtagg ccgccgagga ggtcaggcag agcaatgtgt gcgtataaag cggcaggcgt
      661 ttgagcggct gccacaggcg gcaggagctt tcggtcttga aggcaaaaaa caaccagaat
      721 gaggtggcac aggcaaccgc cgcgccgcgc gcgccgccgg acggtacggc aagccccagc
      781 agcagcaggt ttgccgccag cgcgcccaag gtggcgagcg cgatcgggcg tgtttttcgg
      841 acgacgttca aaccgatgcc gctgatttct accagcgtgc aaaacagcgg cggcagcata
      901 cacgatacga cgataaaccg gacggcagcg tagttttccg gc
//
LOCUS       DBBZXW010000220          918 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.220, whole genome shotgun sequence.
ACCESSION   DBBZXW010000220 DBBZXW010000000
VERSION     DBBZXW010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.220"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..214
                     /locus_tag="ACJJD2_002158"
     CDS             <1..214
                     /locus_tag="ACJJD2_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580607.1"
                     /translation="DAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTRATLLALDWQGN
                     KPLGAAELADLKPLYKDLKNNIGNIV"
     gene            545..>918
                     /locus_tag="ACJJD2_002159"
     CDS             545..>918
                     /locus_tag="ACJJD2_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HGG7580608.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLYDSGLT"
BASE COUNT          285 a          149 c          216 g          268 t
ORIGIN      
        1 tgatgccgga gacgtatatt gcgtctataa catcagactg aagcagtaca ctgcctgcca
       61 ggttacccga gttgaagaac acggtggcaa aaaaacacgt gcgaccctgc tggctttgga
      121 ctggcagggc aacaaaccgc ttggggcggc ggaactggcg gatttgaaac cgctttacaa
      181 agacttaaag aataatattg gaaatattgt atgaacaaaa aattaaacta tatttttatg
      241 ttggactgtt tagggttggt gatattgttt acttgtataa tagctacttt tgaaagagat
      301 tatggattta aaatttttac taattctaag aggcctgaat tttattattg gattggaatg
      361 ttttattatg gaattatttc ttgctggttt gattatcaat taatttcaac aaaggcgaat
      421 tcgtataaaa gaaaagttaa acaatataaa attttttcag taatattttc agttttgata
      481 tttatttcta ctatagtaaa actttaaatt ttggagcaaa aatttatgag cgattcaatt
      541 gaatatgtat tgggaacgcg gtctgcacat gtataaggca agtgccgtcg tgccgacggg
      601 atatgtacgg gttgggaata ccgcgccgct ggtcggcgaa gacacgcaac ggtatgcctc
      661 tttttggggc gacggctacg acgtgtaccg tcagttgaga tggcagcaga tacccgaaaa
      721 acagagaaag gcattcaaaa aagccgccaa aagcaaaaag accgtgatgt ttgccggacg
      781 ggaatacggc atatccaaac agaatttgag cgatgtttgg gatgattttg aagacgcgat
      841 ggaactgaag gcgtttccct gcctgtcttc gctgtttctg accaaatggc ataaaaatct
      901 atatgatagt ggattaac
//
LOCUS       DBBZXW010000221          889 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.221, whole genome shotgun sequence.
ACCESSION   DBBZXW010000221 DBBZXW010000000
VERSION     DBBZXW010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.221"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            425..631
                     /locus_tag="ACJJD2_002160"
                     /pseudo
     CDS             425..631
                     /locus_tag="ACJJD2_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
     gene            631..828
                     /locus_tag="ACJJD2_002161"
                     /pseudo
     CDS             631..828
                     /locus_tag="ACJJD2_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757319.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT          252 a          239 c          189 g          209 t
ORIGIN      
        1 tgttcatcca ctatacatca aacatcaaat tggactgacc aatcagggcg gattctaatg
       61 acacgccgtt cccgccgtca acggcattta cctcgcaccg cccccgaaac acaagaaaaa
      121 actacaccaa actacaattt ttgtttatac aaatatttgt tttgacagga tttaaacgaa
      181 agctccgatt caaatctgcc gaaccgccca aaaatatata gtggattaac aaaaatcagg
      241 acaaggcgac gaagccgcag acagtacaga tagtacggta aggcgaggca acgccgtact
      301 ggtttaaatt taatccattc tattgacctg aatattaaag tttcgcaaag taatgcaacg
      361 ttgctttaat tggtttgacc actattgccg acgattagaa aaatattttc ggagatgttc
      421 aattatggaa acttgggttc aaaactacac ggcaatcggc ggcagcctgt atctgactgc
      481 cgccgccgca ctcttaccca tcgtcttttt ctttgccgcg ctgaccgtcc tgaagctgaa
      541 aggctatcag gcggggcttt atacgctgct gattgcgctt gccgttgccg tattcggctt
      601 cgggatgccg gcgggtatgg cggtttcttc cctgccgccg cagccgcact gacccaacgc
      661 ccctacgcca cgctggattt gaccgcgcat tacaaaatcg gcaaatccac ccgcattggt
      721 ttggactttg aaaacgtgtt caacaaacgc taccgcccta tgcccgacat tcacgtttac
      781 ggcacgccgc gcagcctgac cgcaaccgtc aaacatatag tggattaaca aaaatcagga
      841 caaggcgacg aagccgcaga cagtacaaat agtacagaac cgattcact
//
LOCUS       DBBZXW010000222          886 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.222, whole genome shotgun sequence.
ACCESSION   DBBZXW010000222 DBBZXW010000000
VERSION     DBBZXW010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.222"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..>886)
                     /locus_tag="ACJJD2_002162"
     CDS             complement(<1..>886)
                     /locus_tag="ACJJD2_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7580609.1"
                     /translation="YVGTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSNCLW
                     YEDKRRINRTYGCYGVDSSIMRLMSDDSRFPEVKELMESQMYRLARPFWNWHKEELNK
                     LSSLDWNNFVLNRCTFNWNGGDCLVNKGDDFRNGADFSLIRNSKYKEEMDAKKLEEIL
                     SLKVDANPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGN
                     TTVDVQVIPRPDLTPGSAEAPNAQPLPEVSPAENPANNPNPNENPGTSPNPEPDPDLN
                     PDANPDTDGQPGTRPDSPA"
BASE COUNT          186 a          203 c          219 g          278 t
ORIGIN      
        1 gcgggggaat cgggtcttgt gccgggctgt ccgtccgtat cgggatttgc atcgggattc
       61 aaatcggggt cgggttcggg attggggctc gtgccggggt tctcattggg gttcgggttg
      121 tttgcggggt tttcggcggg cgatacttcg ggcagcggct gtgcgttcgg tgcttccgcg
      181 cttccggggg tcaagtcggg acgcgggatt acttgaacat ccaccgtggt gttgccttgc
      241 gaatccctgc cgaatgttgc gacaacctga acgggattcc cgttcctgtc cgtgacggga
      301 cccatattca cttttgttcc gggtgcgact tctacttttt cggaataacc gggataaccg
      361 gttgccttta tgtatttgtc gggattggca tcgactttca acgataaaat ctcttccagc
      421 tttttggcat ccatttcttc tttgtatttt gaattgcgaa taagggaaaa atcagcccca
      481 tttctgaaat catcaccttt attgaccaaa caatctccgc cattccaatt aaatgtgcaa
      541 cgatttaaaa caaaattatt ccaatccaaa gaacttaatt tattcagttc ttctttatgc
      601 caattccaaa acggacgtgc cagcctatac atttggcttt ccatcaattc tttgacttcg
      661 gggaatctgc tgtcatcgga cataaggcgc ataatcgaac tgtcaacgcc gtagcagcca
      721 taggttctat taatacgtct tttgtcttcg taccaaaggc aattactata ttcgtagcct
      781 tttacaaatt tgtcggtttc ggggtcgtat tggtagcctt gtgcctgtat gtcttctttg
      841 aaagtttcgt atacgtcatg ggctaaaagg gctgttccga cataag
//
LOCUS       DBBZXW010000223          882 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.223, whole genome shotgun sequence.
ACCESSION   DBBZXW010000223 DBBZXW010000000
VERSION     DBBZXW010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.223"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            31..>882
                     /locus_tag="ACJJD2_002163"
     CDS             31..>882
                     /locus_tag="ACJJD2_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7580610.1"
                     /translation="MNEGEVVLTPEQIQTLYGYASRGDTYGGWRYLANLGDRYADNAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLEKFDRVALQHFSQYVDLINENNGR
                     LPNTSEIERSYYKAVTYHGVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNEQA
                     VNNPNGSESDNRKQLISALDKGFDGSFKEKHFTFLQSVIMDVTKLGVEYTIDGWQKIG
                     GWGNGIINDLYKSVAKREWTGIFEIVNNNIKQFRDLFPNPEGWIDDGHQCFAPWVKET
                     KKRNGKYH"
BASE COUNT          294 a          117 c          208 g          263 t
ORIGIN      
        1 caagtaaaaa ataatttaaa ggatcttatt atgaatgagg gtgaagttgt tttaacacca
       61 gaacaaatcc aaaccttgta tggttatgct tctcgtggcg atacctatgg cggttggcgt
      121 tatttggcta atttgggtga ccgttatgcg gataatgctg ccgcaattgt cggtaaggat
      181 gcaaacttaa atggtttgaa tttatggatg aaaaaagggg tggaaaacct atgggatgat
      241 acggtcggta aaaagacccg tttagagaaa tttgatcggg ttgcattgca acatttcagc
      301 caatatgtag atctaattaa tgaaaataat ggtagattac ctaacactag tgaaattgag
      361 agaagttact ataaagccgt tacctatcat ggcgtttctt ctagtgcagc tattgattta
      421 gttattaatc gttcacttcc ggatatggcg gatggttatt gggcattagg tttggggata
      481 gaagccgaac gtatccacaa tgagcaagca gtaaataatc cgaacggtag cgaatcggat
      541 aatagaaagc agttaatatc tgctttagat aaaggatttg atggatcttt taaagagaag
      601 cattttactt ttttacaatc tgtgataatg gatgtaacaa agttaggtgt tgaatataca
      661 atagatggtt ggcaaaaaat tggaggttgg ggtaatggga taatcaatga tttatataaa
      721 agtgttgcaa aaagagagtg gactggaata tttgagatcg ttaataataa catcaagcaa
      781 tttagagatc tgttcccaaa tccggaaggc tggatcgatg atggtcacca atgtttcgct
      841 ccttgggtta aagaaactaa aaaacgcaat ggcaaatatc at
//
LOCUS       DBBZXW010000224          874 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.224, whole genome shotgun sequence.
ACCESSION   DBBZXW010000224 DBBZXW010000000
VERSION     DBBZXW010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.224"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(55..834)
                     /locus_tag="ACJJD2_002164"
     CDS             complement(55..834)
                     /locus_tag="ACJJD2_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HGG7580611.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          206 a          288 c          172 g          208 t
ORIGIN      
        1 aatttagttc actataccga tacatccgaa tatgccagac cgtctaaacg gtattcatac
       61 ctcccaatcc tgcacgcgct tcaaatcgtt ttgcgccaaa gtatccgcgt ggcggttacg
      121 gctctgatat tccctgtctt tcatgatgct gcttgccaca taattcaaat gtgcctttgc
      181 cgcctccgaa gcctcgcccg gccgacggtt cgatatcgcc tcatacagca cgcggtgctg
      241 cgccatcagt ttcggacgcg gatcttcttc ctgattcaga taaataaggc tgctgcgcgt
      301 ctgccggtac agcattttca acaaaccgcc cgacaaatgg ctgaacaaca aattgtgcgc
      361 cgcatccgca atcgtctgat ggaagctgac atcggcttcg ctctgatgtt ccagattgcc
      421 gctttcgcac gcctcctcaa acttttcaag ccaaaaccca atccgcttca aatcggcatc
      481 cgtccggcgt tctgccgcca atgccgccat acagccctcg atgtggcagc tgaaatcaaa
      541 aacatcctgt tcccaattgg aatgcttgcc caaaagctcc tgccaacttt gcaaaaaatc
      601 ctgctgcggc ttgaccgaaa cataataacc gtctccctgc ctcgcttcca aaacctgacg
      661 ggcaaccaaa acattcaatg ccgaccggac cgacgggcgc gaaacgccga actcttccgc
      721 caaaacgcgt tcgggcggaa tcttgccccc ttccgcgtaa accccttccg caatgcgctc
      781 ctccaatacc gacaatacct gatcgctgat tttctgaggc cttaccagtt tcatcactcc
      841 tcctttataa agattccctg cagaaccctt ccga
//
LOCUS       DBBZXW010000225          854 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.225, whole genome shotgun sequence.
ACCESSION   DBBZXW010000225 DBBZXW010000000
VERSION     DBBZXW010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.225"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..310)
                     /locus_tag="ACJJD2_002165"
     CDS             complement(<1..310)
                     /locus_tag="ACJJD2_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7580612.1"
                     /translation="MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFY
                     RKIRTVINYHLVLAADEVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNGRG
                     Y"
     gene            complement(430..>854)
                     /locus_tag="ACJJD2_002166"
     CDS             complement(430..>854)
                     /locus_tag="ACJJD2_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580613.1"
                     /translation="GGYRSGTSEKGFQAVFGRVVTVENVIRLPEKFGRFSGGLWYWAQ
                     QTQVQIRRCAVIVRMPIQPKQTSVFRKWMFDGAKVVRRMEGNLWVFGMVALEKTCFKG
                     QMPSENRFQTAFSVYLKQTGKGSNILQSSYSHKRFIVN"
BASE COUNT          221 a          232 c          160 g          241 t
ORIGIN      
        1 tatagccccg tccgttgcgt ttcagaatgc cgaagacaac cacttttcct gccgcaccgc
       61 gaccacgtct gcctttacgc cgtccgccga aatcgctttc gtccggctcg acagggccct
      121 caaaaacctc atcggcagcc aagaccaaat gatagttgat aaccgtgcgg attttgcggt
      181 agaacagtac tgccgaattg ggatggatac ccaaaatatc ggcggcagaa cgggcggtaa
      241 cttccagtac aaaaaaacgg agcagttctt tctgtacttt tttctttaat ttgcagtgcg
      301 ttatcttcat atttcgaggg taacatatct gctaatctag tacagcccct agtttaaagc
      361 tttgtttctt aagtccgcag agtatgccat ggttagacct tcaaagttga gtattgtact
      421 attttgtttt taattaacta taaaacgctt gtgtgaatag gaagactgca gaatattgct
      481 gccttttcct gtttgcttta aataaacaga aaatgccgtc tgaaaccgat tttcagacgg
      541 catttgtccc ttaaaacacg ttttttcaag cgcgaccata ccaaacaccc acaggttgcc
      601 ttccatcctt cgtacaacct ttgctccatc aaacatccac ttcctaaata ctgatgtctg
      661 cttaggttga atcggcattc gtacgattac ggcacaccgc ctaatctgta cctgcgtctg
      721 ttgcgcccaa taccaaaggc cacctgaaaa tctcccaaac ttttcaggta gccttatcac
      781 gttttcgact gttaccacac gcccaaagac cgcctgaaac cctttttcag acgttccgct
      841 ccgatacccc ccaa
//
LOCUS       DBBZXW010000226          830 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.226, whole genome shotgun sequence.
ACCESSION   DBBZXW010000226 DBBZXW010000000
VERSION     DBBZXW010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.226"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(236..>830)
                     /locus_tag="ACJJD2_002167"
     CDS             complement(236..>830)
                     /locus_tag="ACJJD2_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7580614.1"
                     /translation="LTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVL
                     LNRSIRDNIALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQ
                     RIAIARALITNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTA
                     HRIIAMDKGRIVEAGTQQELLAKPNGYYRYLYDLQNG"
BASE COUNT          194 a          241 c          205 g          190 t
ORIGIN      
        1 gaaggtgctc atgagaaatc ccctaaatgt cttggtggga atttagggga ttttggggaa
       61 ttttgcaaag gtctctagat gagtgaaaaa gaagtacagg ctgcctaaaa agacagaaaa
      121 agtctttccg gcagcctgca ctttggtttc atttcagtca gtaaacccag taaacgacgg
      181 tctgaaaacg cagaacgtta cgaaaaaagc agcctacacg cccatccccc gccttctacc
      241 cgttctgtaa atcatacaga tagcggtaat atccgttcgg cttcgccagc aattcctgct
      301 gtgttcccgc ttccacaatc ctgcctttat ccatggcaat gatccggtgt gccgttttaa
      361 cggtggacag acggtgggcg ataatcagca ccgtccggtt ggcgcaaatg gcctgcatgt
      421 tctgcataat cgctcgttca ctttcataat ccagcgcgct ggtggcttca tcaaaaatca
      481 gaatgcgcgg attggtgatt aacgcgcggg caatcgcaat acgctgccgc tgtccgcccg
      541 acaagccggc cccttgttcg cccaccacgg tgccgtagcc ttccggcagc tccataataa
      601 actcgtgtgc gcccgccagt ttggctgctt cgataatgcg ttccagcggc atacccgtat
      661 ccgtcagcgc gatattgtcg cgtatgctgc ggttgagcag cacattctcc tgcaagacca
      721 cgccgacctg ccgccgcagc caggcaggag cggccaaagc caaatcgttg ccgtccacca
      781 acacccgtcc ctgctccggt acatacagac gctgcaccaa tttggtgagt
//
LOCUS       DBBZXW010000227          800 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.227, whole genome shotgun sequence.
ACCESSION   DBBZXW010000227 DBBZXW010000000
VERSION     DBBZXW010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.227"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>800
                     /locus_tag="ACJJD2_002168"
     CDS             <1..>800
                     /locus_tag="ACJJD2_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7580615.1"
                     /translation="LAENQSRYDTWKEGGIGRSILHGAAGGLTTGSLGGILAGSGTSL
                     AAPYLDKAAENLGPAGKAAVNALGGAAIGYATGGSGGAVVGANVDWNNRQLHPSEYKL
                     AEQYADIVASRLNISKEEALGRIIRHMQRTVDYATAKADNFRTDDAIISILGANNLPK
                     QDQHYTNPNYNKQYIQNYVRDFNLANKYNYFGKTPTQSRDYKVGVVTDIGKAALNSGI
                     GIFESAANLATGEIDPNSWAYVHMGRIGYTHPEYGNAWIRISSATLVY"
BASE COUNT          241 a          163 c          207 g          189 t
ORIGIN      
        1 cttgccgaaa accaaagccg ctacgacacc tggaaagaag gcggcatagg caggagcata
       61 ctgcacgggg cggcaggcgg actgacgacc ggcagtctcg gcggcatact ggccggcagc
      121 ggcacttccc ttgctgcacc gtatttggac aaagcggcgg aaaacctcgg tccggcgggc
      181 aaagcggcgg tcaacgcact gggcggtgcg gccatcggct atgcaactgg tggtagtggt
      241 ggtgctgtgg tgggtgcgaa tgtagattgg aacaataggc agctgcatcc gagtgaatat
      301 aaattagcag aacaatatgc agatatagtg gcttctcgtc taaacatttc aaaagaagaa
      361 gcacttgggc gaattattcg gcatatgcaa cgaaccgtag attacgcaac ggctaaagcg
      421 gataatttcc gtactgatga cgccattatt tcaattttag gagcaaacaa tttacccaag
      481 caagatcaac attacactaa tccgaactac aacaaacaat acattcaaaa ttatgttcgt
      541 gatttcaatt tagccaataa atacaattat tttgggaaaa ctcctactca atcaagggat
      601 tataaagttg gagttgttac agatattggt aaggctgcat taaatagcgg tataggtata
      661 tttgaatcgg ctgcgaattt agcgacaggg gagatagatc cgaactcatg ggcttatgta
      721 cacatggggc gtataggtta tacacatcct gaatatggaa atgcttggat tcggatttca
      781 agtgcaacac tagtgtatta
//
LOCUS       DBBZXW010000228          800 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.228, whole genome shotgun sequence.
ACCESSION   DBBZXW010000228 DBBZXW010000000
VERSION     DBBZXW010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.228"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..>800)
                     /gene="mafB"
                     /locus_tag="ACJJD2_002169"
     CDS             complement(<1..>800)
                     /gene="mafB"
                     /locus_tag="ACJJD2_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HGG7580616.1"
                     /translation="GPILPITHERTGFEGIIGYETHFSGHGHEVHSPFDNHDSKSTSD
                     FSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARDIYSYYVKGTSTKTKT
                     NIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNWWANRMDDIRGIVQGA
                     VNPFLMGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLSPEAQLAAATALQDSA
                     FAVKDSINSARQWADAHPNITATAQTALSVAEAATTVWGGKKVELNPT"
BASE COUNT          185 a          199 c          183 g          233 t
ORIGIN      
        1 ttggtcgggt taagttctac ttttttaccg ccccaaaccg tagttgcggc ctctgctacg
       61 gaaagggcag tttgggcagt agctgtaatg ttcggatggg catcagccca ttgtctggca
      121 gagttgatac tgtcttttac cgcaaaagca ctgtcttgta atgcggttgc ggccgcaagt
      181 tgtgcttccg gacttaaatt tcctaaattg tgaataccct gtaaagtttt ccgtgctgcc
      241 gcataggtta ccgggtttac cgcactgtct gtaattgccc caactcccaa tccctgaaaa
      301 cccattaaaa aaggattaac cgcaccttgg acgatgccgc gaatatcatc catacggtta
      361 gcccaccaat ttttattggg gtcgctttcc catatcagtt ttcctgcttc atccgcacgg
      421 ctgaaaaaac cagaggcggc accggcattt tcttttagcc aacggtctga aaatggggct
      481 tgagggacaa tattagtctt tgtttttgtt gaagttcctt tgacataata gctgtatata
      541 tcccttgctc ctccgggggg cggataatcg ctgccttgcg gcccgtcata tccatcctcc
      601 ggatgaattt ccgaccctgt ccgatgaagt tggtaaacag taaaaccacc gtctacaccg
      661 ccgctgaaat cagaagtgct ttttgaatca tgattatcga acggactgtg tacttcatgt
      721 ccatgtcctg aaaaatgggt ttcataaccg ataatgcctt caaaccctgt ccgttcgtgt
      781 gtaataggca gtatggggcc
//
LOCUS       DBBZXW010000229          797 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.229, whole genome shotgun sequence.
ACCESSION   DBBZXW010000229 DBBZXW010000000
VERSION     DBBZXW010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.229"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            452..527
                     /locus_tag="ACJJD2_002170"
     tRNA            452..527
                     /locus_tag="ACJJD2_002170"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:486..488,aa:Glu,seq:ttc)
BASE COUNT          198 a          202 c          191 g          206 t
ORIGIN      
        1 cagcaatatt caaagattat ctgaaagttt gaggttctag attcccgctt tcgcgggaat
       61 gacgaaaagt ggcgggaatg acgaagtttc agacggcatc gcccgcctgt tttgatatgg
      121 cggcaccccc cccgacaaaa aaaacaatcc ggaacgcatc tgaccgttcc ggcttgtttt
      181 caggcgaatc cgccgcatca gaacatactg cgcacgccca tattgacctg ccaagtctgg
      241 cgcatcgtgt gcatcgaaga cctttgcgcc tcaaaataaa gctgccttcc gttgtcggca
      301 ttaccacgca aaaaaaatga attgcttgat attccaatgt tttttatatg tttttatatt
      361 gtgatgcgat cagacaaacg cccccctgac atttgtttag acggcatcgt attgctaaat
      421 ttctataagt atgtataatg tccgtttcca cgcgcccatc gtctagaggc ctaggacact
      481 gccctttcac ggcggcaacc ggggttcgaa tccccgtggg cgtgccaatt caaaaacctg
      541 cttgtttcaa gcaggttttt ttattatgaa tcgtcattcc cgcacccttc gtcattcccg
      601 caaaagcggg aatctagagc gtagggttga agaaaccgtt ttatccgata agtttccgtg
      661 ccgacaggtc tggattcccg cctgcgcggg aaggacggca gagggtggac gatgctgtct
      721 gaagcctgac aaagcatttg atgccgtctg aaacttcgtc attcccgcaa aagcgggaat
      781 ctagagcgta gggttga
//
LOCUS       DBBZXW010000230          787 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.230, whole genome shotgun sequence.
ACCESSION   DBBZXW010000230 DBBZXW010000000
VERSION     DBBZXW010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.230"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..110)
                     /locus_tag="ACJJD2_002171"
     CDS             complement(<1..110)
                     /locus_tag="ACJJD2_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7580617.1"
                     /translation="MSTFFQQTAQAMIARHIDRFPLLKLDQVIDWQPIEQ"
     gene            complement(231..542)
                     /gene="rpsJ"
                     /locus_tag="ACJJD2_002172"
     CDS             complement(231..542)
                     /gene="rpsJ"
                     /locus_tag="ACJJD2_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HGG7580618.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            complement(560..>787)
                     /locus_tag="ACJJD2_002173"
     CDS             complement(560..>787)
                     /locus_tag="ACJJD2_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HGG7580619.1"
                     /translation="HTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVEL
                     IAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
BASE COUNT          200 a          180 c          197 g          210 t
ORIGIN      
        1 tactgctcga tcggctgcca atcaatcacc tggtccaact tcaatagcgg gaaacggtcg
       61 atgtgtctgg caatcatggc ttgggcggtt tgctggaaga aggtgctcat gagaaatccc
      121 ctaaatgtct tggtgggaat ttagaggatt ttggggaatt ttgcaaaggt ctcggcataa
      181 cataaaaaat ccccaagcat tgattgcttg gggattttca atagtccgaa ttattggact
      241 ttgatttcta catcaacacc ggccggcaaa tccagcttca tcagcgcatc ggtagtttta
      301 tcggtccaat ccacgatgtc catcaggcgc aagtgggtgc ggatttccaa ttgctcacgg
      361 gaagttttgt tcacgtgcgg agaacgcaaa atgttgaaac gctcgatttt ggtcggcaaa
      421 ggaatcgggc cttttacaac tgcaccggta cgttttgcag tttcaacgat ttcttgtgca
      481 gaacggtcaa tcagggcgta atcataagct ttcaggcgga tacggatttt ttggtttgcc
      541 atttatcaat atccttcaat taagcgataa cagaagaaac cacgccggca cccacggtac
      601 ggccgccttc gcgaatcgca aagcgcaaac cttcttccat agcgataggc gcaatcagtt
      661 ctacggtgat ggttacgttt tcacccggca ttaccatttc tacaccttct tccaaagtaa
      721 ccgcgccagt tacgtcggtg gtacggaagt agaattgcgg acggtagtta gcgaagaacg
      781 gggtatg
//
LOCUS       DBBZXW010000231          727 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.231, whole genome shotgun sequence.
ACCESSION   DBBZXW010000231 DBBZXW010000000
VERSION     DBBZXW010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.231"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            254..499
                     /locus_tag="ACJJD2_002174"
     CDS             254..499
                     /locus_tag="ACJJD2_002174"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580620.1"
                     /translation="MVLELSTYCVSPSAGSVVDFDLKKRGGVGQDVFRGTPDCGGVCL
                     YFAEGFKNRVVGYIGCTVLVCARSGQGAMGKFARDAV"
     gene            489..650
                     /locus_tag="ACJJD2_002175"
     CDS             489..650
                     /locus_tag="ACJJD2_002175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580621.1"
                     /translation="MPSEAFRRHFLFVVAWCAGCGGFPDGTADAAVPSVGFSPLLEVT
                     VGGQVVVRA"
BASE COUNT          129 a          141 c          256 g          201 t
ORIGIN      
        1 ctgtgtgtgc cgtatggcgg ggcagggtgt ctgatttcgt gatgaccgtg ttggtggaat
       61 cgaagcctgc cgttccggta agggttgccc gggagggcaa ggccggcttt gtatgcccgg
      121 ttaagaggga aggatgagac tgtgcatttt tgattttaat tggctatatg ccgtctgaaa
      181 atcggtttga aggcggtact tttatgctgc ctttcataca ggggaatggg aacgttgcgg
      241 ctgcgcggaa accgtggtgc ttgaactttc tacttactgc gtttcgccgt cggcgggttc
      301 ggtggtggat tttgacctga aaaaaagggg gggtgttggg caagatgttt ttaggggaac
      361 gccggattgc ggtggggttt gcctttattt tgcagaaggc tttaaaaacc gtgtggtcgg
      421 gtacatcggc tgtaccgtgc ttgtttgtgc aagatcgggg cagggtgcga tgggcaagtt
      481 tgcccgggat gccgtctgaa gcgttcagac ggcatttttt attcgtcgtg gcttggtgcg
      541 cgggatgtgg cggcttcccg gacggcacgg cggatgcggc tgtaccatcg gtcgggttct
      601 cgccgctttt ggaggtaact gtcggcggtc aggtggtggt gcgggcttga aaaaccggcg
      661 gttagggtgt ctttatattt caccccgtca aaagggcgca ttatagtgaa ttaacaaaaa
      721 ccggtac
//
LOCUS       DBBZXW010000232          722 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.232, whole genome shotgun sequence.
ACCESSION   DBBZXW010000232 DBBZXW010000000
VERSION     DBBZXW010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.232"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(125..>722)
                     /locus_tag="ACJJD2_002176"
     CDS             complement(125..>722)
                     /locus_tag="ACJJD2_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG7580622.1"
                     /translation="LSIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQTPVKPAAQPPV
                     QSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGV
                     DIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQV
                     KRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          157 a          206 c          200 g          159 t
ORIGIN      
        1 acacagtcaa acaaatttat atgccccgtc ccttctgaat gatttgaaaa cacagccgcc
       61 aaaaacaaaa atgccgtctg aaaacctttc agacggcatt tccaatttga tttcaggcag
      121 aaagtcagaa cgcgatatag ctgttcgggt taaccggttt gccgttttgc cgcacctcga
      181 aatgaagctg cgttctggaa gcgtcggtat tgcccatcaa agcgacctgc tgcccgcgtt
      241 tgacctgctg gccttcgccg accagcaatt tttggttgtg cccgtatgcg gtcaggaagg
      301 aagaattatg ctggatgatg accagattgc cgtatcccct caaaccggaa cctgcataaa
      361 ccactttgcc gtcagccgcc gccaaaacgg gctgtcccgc attaccggca atatcgacac
      421 ccttgttgtt gccgccgaaa tcggcaacca ctttaccttg cgtcggacgc tgccaaacaa
      481 tgccgccgac cgaacgcgtg ccggaaggcg aagcggcagg agattgcggg gcgggcgcgg
      541 gaaccgcttt attttccgca gcgggcgcgg caggttgcgg cgcggactgc acaggcggtt
      601 gcgcggcggg tttcacaggg gtttgcacgg cagccggtac ggcgggcctg ctttctacgg
      661 ctgcggtttt cggtgcggca tatcctgccg gtttgacttt aacaatctga ccgatgctca
      721 ac
//
LOCUS       DBBZXW010000233          696 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.233, whole genome shotgun sequence.
ACCESSION   DBBZXW010000233 DBBZXW010000000
VERSION     DBBZXW010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.233"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..128)
                     /locus_tag="ACJJD2_002177"
     CDS             complement(<1..128)
                     /locus_tag="ACJJD2_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HGG7580623.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEKTDQKAVSAQQA"
BASE COUNT          230 a          126 c          102 g          238 t
ORIGIN      
        1 ttagcctgtt gcgcacttac tgctttttga tctgtctttt cattcacagg ttcacatgag
       61 gtcatagtaa aaacactccc aataaacaaa ataaaaagtt gataaatggt agtagcatat
      121 ggtctcataa tttcaagcct agaaattagt taaagaatat attatggtag atactaactc
      181 tttagttaaa aataatttac taacttttac tacttaggta taaattccaa tacttaacta
      241 aactgagggt aaatatattt atccaagata gaagagaaac ttttttctct gtttccgcaa
      301 gaatagttac gggttgtgaa atatgctcta tacccaagca gtagatattt tcattgttac
      361 ttaccgtatt gcttcataga attggcactc tacgctttcc tttaaaaatc gtcaataacg
      421 attatcattt tctttaaatt tattcaaaac aatatcctta tacacatctc aagcccgctg
      481 aaataaagca aagtggtggt tcatagatgg caataccgat ttcaaagcag cctgcacttt
      541 gacaacacac gagaaatacg ggaagaacag ggcatcagca tatatttcag cccgaagccg
      601 tttcattcgt ttaaaaaact gcttttttca caatttacct ttacaaagcc tatacgtatc
      661 cttacaattt gttttgctgt ttttggtata tttttg
//
LOCUS       DBBZXW010000234          685 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.234, whole genome shotgun sequence.
ACCESSION   DBBZXW010000234 DBBZXW010000000
VERSION     DBBZXW010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.234"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..264)
                     /locus_tag="ACJJD2_002178"
     CDS             complement(<1..264)
                     /locus_tag="ACJJD2_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HGG7580624.1"
                     /translation="MFRILIISFLFLLSAKSFSADLEIKNGKLMYALSEKYNDNGFKA
                     YKVLGEGGGIHTEYNYKFDKSLNLNVLESSTGARSLEKVPVKVT"
     gene            complement(218..508)
                     /locus_tag="ACJJD2_002179"
     CDS             complement(218..508)
                     /locus_tag="ACJJD2_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580625.1"
                     /translation="MNKNERDFFYISNSDLDKLSESYPDRPLSYVFYCYLKETGLLKN
                     FSMDKCHNFFNRINFNESCFEIKFKDDSFFIIGNGKIDVSDSNNFFSVSFEC"
BASE COUNT          258 a          126 c           83 g          218 t
ORIGIN      
        1 agttacttta acggggactt tttcaagaga gcgtgcgcct gttgaacttt ctaatacatt
       61 caaattcaaa cttttatcaa atttgtaatt atattctgta tgaattcctc ctccctcacc
      121 taaaactttg tatgccttaa atccattatc gttatatttt tccgaaagtg catacatcaa
      181 tttcccattt ttaatttcta aatctgctga aaaagattta gcactcaaaa gaaacagaaa
      241 agaaattatt agaatccgaa acatcaattt ttccattgcc aataatgaaa aatgaatcat
      301 ccttgaattt aatttcaaag caagattcat taaaattaat tctattaaaa aaattatgac
      361 atttatccat tgagaaattt ttcaatagac cagtttcttt caaataacaa taaaacacat
      421 aagaaagagg cctatcagga taagattctg acaatttatc taaatcagaa tttgatatat
      481 agaaaaagtc acgttcattt ttattcatgg tttcaagcct caaatgtcta attaaaagcc
      541 tgattttgac accataactt catgcgctca attcttaaac agaaccgccc cgattaatac
      601 gggtacggaa acgccgagat aaaaataaaa atccatcatt tcaaaacctt tttcagcagg
      661 gaaacaaagt aaacggacgc catca
//
LOCUS       DBBZXW010000235          664 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.235, whole genome shotgun sequence.
ACCESSION   DBBZXW010000235 DBBZXW010000000
VERSION     DBBZXW010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.235"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..165
                     /locus_tag="ACJJD2_002180"
     CDS             <1..165
                     /locus_tag="ACJJD2_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7580626.1"
                     /translation="TKQVTKGVFDGKGEAKIPSYTWHHHQDTGRMQLISERKHTQTGH
                     IGGEAMDKGK"
     gene            168..566
                     /locus_tag="ACJJD2_002181"
     CDS             168..566
                     /locus_tag="ACJJD2_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580627.1"
                     /translation="MLGLTRNNCDDLGFAILCYERNAADKKEFLDWLYEIVRTVPAES
                     FPRYLIDLIDCLESDDCSINIYNIIGFVPTTGMTKKEKDAVYGITYIRNQEFYDIPIT
                     REKALKALKKHPEIYQKFRHFFPFVELPPL"
BASE COUNT          228 a          106 c          151 g          179 t
ORIGIN      
        1 acaaagcagg taaccaaagg agtgtttgac ggaaaaggag aagctaaaat accgagctat
       61 acttggcatc atcatcagga tacgggacga atgcagttaa tatccgaaag aaagcatacg
      121 caaacagggc atataggtgg tgaagcaatg gataaaggaa aatgattatg ttggggctta
      181 cacggaacaa ttgtgatgat ttgggatttg ctatattgtg ttatgagcgc aatgcagccg
      241 acaaaaaaga attcttggat tggttatatg aaattgtcag gactgtccct gccgaaagtt
      301 ttccaaggta tctgattgat ttaatagatt gtttggaatc agatgattgt tccataaata
      361 tatataatat tattggcttt gttccaacta ccggtatgac gaaaaaggaa aaagatgccg
      421 tatatggcat tacctatata cggaatcaag agttttacga tattccgatt actagggaga
      481 aggcgttaaa agccttaaaa aaacatcctg aaatttatca gaagtttcgg catttctttc
      541 cgtttgtaga actgcccccg ctttaaacag tcaaaatgcc gtctgaaacg atattcggct
      601 ttcagacggc atttttgaca caaagcaggt aaccaaaaga gcgtttgacg gcaaaggaag
      661 ataa
//
LOCUS       DBBZXW010000236          627 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.236, whole genome shotgun sequence.
ACCESSION   DBBZXW010000236 DBBZXW010000000
VERSION     DBBZXW010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.236"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(1..75)
                     /locus_tag="ACJJD2_002182"
                     /pseudo
     CDS             complement(1..75)
                     /locus_tag="ACJJD2_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(417..>627)
                     /locus_tag="ACJJD2_002183"
     CDS             complement(417..>627)
                     /locus_tag="ACJJD2_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009289 - pilus [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HGG7580628.1"
                     /translation="VNNEIKGKKLSLWAKRQNGSVKWFCGQPVERTAPTTTNDDVKAD
                     TAANGKQIDTKHLPSTASTRKSTPN"
BASE COUNT          125 a          136 c          174 g          192 t
ORIGIN      
        1 ggcgggccat tcgccgtgat tcaggtaata ctctgtgacg gctgattttt gaccttcgac
       61 caaaaggatc gcttcgtcat tcccgcgcag gcgggaatcc agcctcgtcg gcacggaaac
      121 ttatcgggaa aacggtttct tgagattttg cgtcctggat tcccactttc gtgggaatga
      181 cgggattaaa gtttcaaaat ttatctaaat aactgaaact caacgaacta gattcccgct
      241 tttgcgggaa tgccgaattt taggtttctg tttttggttt tctgtctttg tgggaatgat
      301 gaaaatttaa gttttaggaa tttatcggaa aaaacagaaa ccgctccgct gtcattcccg
      361 cgcaggcggg aatccagccc cgtcggtacg gaaacttatc gggtaaaaag gtttctctag
      421 tttggtgtcg attttcttgt cgatgctgtt gacggcaggt gcttggtgtc gatctgcttg
      481 ccgttggcgg cggtgtcggc tttgacgtcg tcgttggtgg tggtgggggc ggtgcgctca
      541 accggctgtc cgcagaacca ttttaccgaa ccgttttgac gcttggccca cagggagagt
      601 tttttgcctt tgatttcgtt gtttacg
//
LOCUS       DBBZXW010000237          621 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.237, whole genome shotgun sequence.
ACCESSION   DBBZXW010000237 DBBZXW010000000
VERSION     DBBZXW010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.237"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          148 a          142 c          168 g          163 t
ORIGIN      
        1 aaatttaaat caggacaaag cgacgaagcc gcagacagta caaatagtac ggaaccgatt
       61 cacttggtgc ttcagcacct tagagaatcg ttctctttga gctagggcga accaacgctg
      121 tactggttta gatttaattc actatacctg cgtaatggta tcgggtactc atcatcaacc
      181 tgccttgcat tcggttgtgt tgtccggcaa ctgtccggtt gtgtcgatgg gttgccctgc
      241 cgctccctgt gctgcgcaac ggttgtgtgc cttgggtggg cgcgagtggc ggccgggcgg
      301 tttgttgcta tgatacggga gttccgatat acaagggtgg gcttcagccc accaatcaac
      361 gaccgaaaaa gaaaaaacgg tgggctgaag cccactctac gcaattacgc aactgttatc
      421 gtggggatga cgggatttta ggtttttgtt tttctgtttt tgcgggaaag atgggtttta
      481 ggttgcggtc atttatcgga aaagcagaaa tcgctccgcc gtcattcccg cgaaagcggg
      541 aatctgaaca cgtccgtagg gaaacctata tcccgtcatt cccacgaaag tgggaatcta
      601 gaacctctga attttcagac a
//
LOCUS       DBBZXW010000238          618 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.238, whole genome shotgun sequence.
ACCESSION   DBBZXW010000238 DBBZXW010000000
VERSION     DBBZXW010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.238"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          182 a          178 c          118 g          140 t
ORIGIN      
        1 actttcagat aatctttgaa tattgccgct gccttaaggt ctggattccc gcctgcgcgg
       61 gaatgacgaa tccatccgta cggaaacctg caccgcgtca ttcccacgaa cccacatccc
      121 gtcattccca cgaaagtggg aatccagaac gtaaaatctc aagaaaccgt tttatccgat
      181 aagtttccgt accgaacaga ctagattccc gcctgcgcgg gaatgacgat tcataagttt
      241 cccgaaattc caacataacc gaaacctgac agtaaccgta gcaactgaac catcattccc
      301 accacttttc gtcattccca cgaaagtggg aatccagaat ctcggacttt cagataatct
      361 ttgaatattg ctgttgttct aaggtctaga ttcccgcctg cgcgggaatg acgaatccat
      421 ccgtacggaa acctgcaccg cgtcattccc acgaacccac atcccgttat taccacgaaa
      481 gcgggaatct aggactcagg gttaagaaaa cctacatccc gtcattccct caaaaacaga
      541 aaaccaaaat cagaaaccta aaatcccgtc attcccacga aagtgggaat ctaggtctgt
      601 cggtgcggaa acttatcg
//
LOCUS       DBBZXW010000239          589 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.239, whole genome shotgun sequence.
ACCESSION   DBBZXW010000239 DBBZXW010000000
VERSION     DBBZXW010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.239"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..208)
                     /locus_tag="ACJJD2_002184"
     CDS             complement(<1..208)
                     /locus_tag="ACJJD2_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580629.1"
                     /translation="MRLSLYGCFYFTFSFVWVWFEEAGDYRFLSAVLKIVSFSADFRH
                     FFIGVGYLYWHGASGVLIGSEFEIF"
     gene            353..>589
                     /locus_tag="ACJJD2_002185"
     CDS             353..>589
                     /locus_tag="ACJJD2_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009289 - pilus [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HGG7580630.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAI
                     LLAEGQKSAVTEYYLNHGEWPGDNSSAGVASSTDI"
BASE COUNT          199 a          161 c           97 g          132 t
ORIGIN      
        1 caaaaatctc aaattccgac ccaatcaaca cacccgatgc cccatgccaa tagagatacc
       61 ccacgccaat aaaaaagtgc cgaaaatcgg cactaaaact gacaattttc aacactgctg
      121 acaaaaaacg gtaatcccct gcttcctcaa accacaccca aacgaaagaa aatgtaaaat
      181 aaaaacaacc atataaagat aaacgcataa attttcacct caaaacacaa acttggtacc
      241 aatcttgctt tataatacac aggtatcgca aaaaaatacc gatggtcaaa tacattgcat
      301 aatgccgatg gcgtaagctt gaagcatttc ctttccaatt aggagtaatt ttatgaacac
      361 ccttcaaaaa ggttttaccc ttatcgagct gatgattgtg attgccatcg tcggcatttt
      421 ggcggcagtc gcccttcctg cttatcaaga ctacacagcc cgcgcacaag tttccgaagc
      481 catccttttg gctgaaggtc aaaaatcagc cgtcaccgag tattacctga atcacggcga
      541 atggcccggc gacaacagtt ctgccggcgt ggcatcctcc accgacatc
//
LOCUS       DBBZXW010000240          578 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.240, whole genome shotgun sequence.
ACCESSION   DBBZXW010000240 DBBZXW010000000
VERSION     DBBZXW010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.240"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(131..424)
                     /locus_tag="ACJJD2_002186"
     CDS             complement(131..424)
                     /locus_tag="ACJJD2_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HGG7580631.1"
                     /translation="MNIDDFTPSKIANFFADPDTYSNVLEEVSRFIYSLVPDDANPWK
                     GGEDYIGRGISEWGELLEKWYKQDFLPYLEKNGTNFRNLKIGCLNSLNGQESG"
BASE COUNT          165 a          127 c          100 g          186 t
ORIGIN      
        1 ccttggctgc ggtggtcgaa caatgcacct gcaaagcctt tggcggcgac agtttctatg
       61 ccgtcaccgt ccaaatctag ggcaaggggg tcgtaaacgt tatatttgcc tgaacgtttg
      121 agagctaatt tcaaccactc tcttgcccat tcagggaatt caggcagcca atcttcaaat
      181 ttcggaaatt ggtcccattc ttttcaagat aagggagaaa atcttgttta taccattttt
      241 ccagtaactc tccccattca cttatccctc gtccaatata atcttcgccc cctttccaag
      301 ggtttgcatc atcaggaact aaggaatata taaacctaga tacttcttct aatacattgc
      361 tgtatgtatc aggatccgca aaaaagtttg ctatcttact tggtgtaaaa tcatctatat
      421 tcattataga ttcgccaagc ctctcgtttc cataatcctt atttaattca attcatgctg
      481 taaaacagta gaggatttta gcatttttct cgtatatctc gagatacatt tcttaaattt
      541 aaaaaaatgt tatcgaggga tgcaagtaaa gaagcagt
//
LOCUS       DBBZXW010000241          576 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.241, whole genome shotgun sequence.
ACCESSION   DBBZXW010000241 DBBZXW010000000
VERSION     DBBZXW010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.241"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            29..>576
                     /locus_tag="ACJJD2_002187"
     CDS             29..>576
                     /locus_tag="ACJJD2_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7580632.1"
                     /translation="MQADLAYAAERITHDYPQATGANNTSTVSDYFRNIRAHSIHPRV
                     SVGYDFGGWRIAADYARYRKWNNNKYSVNTKNVQKNDNGNRQDLKTENQENGTFHAVS
                     SLGLSAIYDFKLNDKFDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTI
                     YYAPETQNAYHESHSIRRLGLGV"
BASE COUNT          179 a          158 c          123 g          116 t
ORIGIN      
        1 tgaagacggc agtcgcagcc cgtattatgt gcaggcggat ttagcctacg ccgccgaacg
       61 cattacccac gattatccgc aagcaaccgg tgcaaacaac acaagcacag taagcgatta
      121 tttcagaaac atccgtgcgc attccatcca cccccgggtg tcggtcggct acgactttgg
      181 cggctggaga atagcggcag attatgcccg ttacagaaaa tggaacaaca ataaatattc
      241 cgtcaacaca aaaaatgtgc aaaaaaacga caatggcaac aggcaagacc tgaagacgga
      301 aaatcaggaa aacggtacat tccacgccgt ttcttctctc ggcttatccg ccatttacga
      361 tttcaaactc aacgataaat tcgataaatt caaaccctat atcggtgtgc gcgtcgccta
      421 cggacacgtc agacacagca tcgattcgac caaaaaaaca acaaatgttg ttaccgtcgc
      481 cggtgctgct aacacagcac ctacgattta ttatgcacca gagacgcaaa acgcctatca
      541 cgaaagccac agcatccgcc gcttgggtct tggtgt
//
LOCUS       DBBZXW010000242          561 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.242, whole genome shotgun sequence.
ACCESSION   DBBZXW010000242 DBBZXW010000000
VERSION     DBBZXW010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.242"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..252
                     /locus_tag="ACJJD2_002188"
     CDS             <1..252
                     /locus_tag="ACJJD2_002188"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580633.1"
                     /translation="IQPPTQQESIGKNRNPQTVIPAKAGIQPPLTQQEFIEKTETSKP
                     SFPRKWESSNRKTTGIYRKKPQPPKKPGGYRTILPNPDL"
     gene            335..505
                     /locus_tag="ACJJD2_002189"
     CDS             335..505
                     /locus_tag="ACJJD2_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HGG7580634.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT          184 a          167 c          121 g           89 t
ORIGIN      
        1 atccagcccc caacgcaaca ggaatccatc ggaaaaaaca gaaaccctca aaccgtcatt
       61 cccgcaaaag cgggaatcca gcccccccta acgcaacagg aattcatcga aaaaaccgaa
      121 acctccaaac cgtcattccc acggaagtgg gaatccagta atcgaaaaac cacaggaatc
      181 tatcgaaaaa aaccccaacc cccaaaaaaa ccgggcggat accgcaccat cctcccaaac
      241 cctgatttat agtggatgaa caaaaatcag gacaaggcga ggcaacgccg taccggtttt
      301 tgttcatccg ctatacaaaa acaaggaaac acaaatggcg caatatatgt gcggcccctg
      361 cggctggatt tacgatgaag aacacggcga ccccgaacac ggcatccccc ccgggacaaa
      421 gtttgaagac attcccgacg actggaaatg ccccgaatgc ggcgtaggta aagaagattt
      481 ctacctgttg gatttcgtga tatagcggca gccgaacccc ttcggaaaat tcctcggcgt
      541 tccgcctgcg gtagcaggga a
//
LOCUS       DBBZXW010000243          549 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.243, whole genome shotgun sequence.
ACCESSION   DBBZXW010000243 DBBZXW010000000
VERSION     DBBZXW010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.243"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          127 a          116 c          146 g          160 t
ORIGIN      
        1 gcggaaactt atcggataaa acggtttctt cagattttac gttctagatt cccacgaaag
       61 tgggaatcta gttcgttcgg tttcgcttgt tttaagtttc gggtaacttc cacttcgtca
      121 ttcccgcgca ggcgggaatc taggtctgtc ggtgcggaaa cttatcggat aaaacggttt
      181 cttcagattt tacgttctag attcccactt tcgtgggaat gacgggatgt aggttcgtgg
      241 gaatgacggg atgtaggttt ccgtatggat ggattcgtca ttcccgcgaa ggcgggaatc
      301 tagacattca atgctaaggc aatttctcgg aaatggctga aactcaaaaa actagattcc
      361 cactttcgtg ggaatgacgg cagagcggat tctgttgctc ccgataaatg ccgcaacctc
      421 aaatcccgtc attcccgcgc aggcgggaat ctaggtctgt cagtgcggaa acttatcagg
      481 taaaacggtt tcttgagatt ttgcgtcctg gattcccact ttcgtgggaa tgacgggatg
      541 taggttcgt
//
LOCUS       DBBZXW010000244          545 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.244, whole genome shotgun sequence.
ACCESSION   DBBZXW010000244 DBBZXW010000000
VERSION     DBBZXW010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.244"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            166..356
                     /locus_tag="ACJJD2_002190"
                     /pseudo
     CDS             166..356
                     /locus_tag="ACJJD2_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            301..>545
                     /locus_tag="ACJJD2_002191"
     CDS             301..>545
                     /locus_tag="ACJJD2_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HGG7580635.1"
                     /translation="MKVQSWKERRDFNIVKQDLDFSCGAASVVTLLNNFYGQKLTEED
                     VLKKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQL"
BASE COUNT          161 a          105 c          148 g          131 t
ORIGIN      
        1 atgacgattt ataagtttcc cgaaacgccc aaaaaaaccg aaatccgaca ggcaggattt
       61 ttgctttcgt ggggatgacg ggattttaag ttacggtcat ttatcggaaa agcagaaact
      121 gctccgccgt tattccagcg aaggcgggaa tctgaacacg tccgcacgga aacctatagt
      181 ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacagata gtacggcaag
      241 gcgaggcaac gccgtactgg tttaaattta atccactata atcctgttgc ttatggaaaa
      301 atcaaagtgc agagttggaa agaaaggcgc gatttcaata ttgtaaagca ggatttggat
      361 ttttcctgcg gggcggcttc ggtggtgacg cttttgaaca atttttacgg gcaaaagctg
      421 acggaagagg acgtgttaaa aaaactggat aaggagcaga tgcccgcgtc gtttgaggat
      481 atgcggcgca ttatgcctga tttgggtttt gaagcgaaag gctatgccct gtctttcgag
      541 cagct
//
LOCUS       DBBZXW010000245          542 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.245, whole genome shotgun sequence.
ACCESSION   DBBZXW010000245 DBBZXW010000000
VERSION     DBBZXW010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.245"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>542
                     /locus_tag="ACJJD2_002192"
     CDS             <1..>542
                     /locus_tag="ACJJD2_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HGG7580636.1"
                     /translation="IVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSA
                     LKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVE
                     RGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQ
                     VLAKPGTITPHTKFKAEVYVL"
BASE COUNT          144 a          135 c          144 g          119 t
ORIGIN      
        1 atcgtgttca tgaacaaatg cgacatggtc gacgatgccg agctgttgga actggttgaa
       61 atggaaatcc gcgacctgct gtccagctac gacttccccg gcgacgactg cccgattgta
      121 caaggttctg cactgaaagc cttggaaggc gatgccgctt atgaagagaa aatcttcgaa
      181 ctggctgccg cattggacag ctacatcccg actcccgagc gtgccgtgga caaaccgttc
      241 ctgctgccta tcgaagacgt attctctatt tccggtcgtg gtacagtagt aaccggtcgt
      301 gtagagcgcg gtatcatcca cgttggtgac gagatcgaaa tcgtaggtct gaaagaaact
      361 caaaaaacca cttgtaccgg tgttgaaatg ttccgcaaac tgctggacga aggtcaagca
      421 ggcgacaacg taggcgtatt gctgcgcggt accaaacgtg aagacgtaga gcgtggtcaa
      481 gtattggcta aaccgggtac aatcactcct cacaccaagt tcaaagcaga agtatacgta
      541 ct
//
LOCUS       DBBZXW010000246          533 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.246, whole genome shotgun sequence.
ACCESSION   DBBZXW010000246 DBBZXW010000000
VERSION     DBBZXW010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.246"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          163 a          124 c          132 g          114 t
ORIGIN      
        1 ttcccgcaaa agcgggaatc tagaacctct aacgtggcag gaatctatcg gaaatgactg
       61 aaaccgaaca gactggattc ccgcctgtgc gggaatgacg aagcctgcgt gggaatgacg
      121 aaaagcaacc tttccgtgtc attcccgcaa aagcgggaat ctaggaactc aaagctgcaa
      181 gaatttatca gaaacaactg gaacttaaaa aaactagatt cccgcctgcg cgggaatgac
      241 gaagggttaa agaaatgacg agaaacggcg gtaatttatc gggaataacc gaaaacgaac
      301 ggaaatcagg acaaggcgac gaggccgcag acagtacaaa taggacggaa ccgattcact
      361 tggtgcttga gcaccttaga gaatcgttct ctttgagcta aggcgaggca acgacgtact
      421 ggtttttgtt catccactat aacagcaacc ctgtcgccgt cattcccgcg aaagcgggaa
      481 tccagtccgt tcagtttcgg tcatttccga taaattcctg ttgcttttca ttt
//
LOCUS       DBBZXW010000247          529 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.247, whole genome shotgun sequence.
ACCESSION   DBBZXW010000247 DBBZXW010000000
VERSION     DBBZXW010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.247"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..76
                     /locus_tag="ACJJD2_002193"
     CDS             <1..76
                     /locus_tag="ACJJD2_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HGG7580637.1"
                     /translation="DGHKIYKFEFCEIVDNCNFDDVFV"
     gene            60..455
                     /locus_tag="ACJJD2_002194"
     CDS             60..455
                     /locus_tag="ACJJD2_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7580638.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDPETDKFAKVSG"
BASE COUNT          167 a          114 c          122 g          126 t
ORIGIN      
        1 agatggtcat aaaatataca aatttgaatt ttgcgaaatt gtcgataatt gcaattttga
       61 tgatgtattc gtttgaagcg aatgcaaatg cagtaaaaat atctgaaact gtttcagttg
      121 ataccggaca aggtgcgaaa attcataagt ttgtacctaa aaatagtaaa acttattcat
      181 ctgatttaat aaaaacggta gatttaacac acatccctac gggcgcaaaa gcccgaatca
      241 acgccaaaat aaccgccagc atttcccgcg ccggcgtatt ggcggggggc ggcaaacttg
      301 cccgcttagg cgcgaaattc agcacaaggg cggttcccta tgtcggaaca gcccttttag
      361 cccatgacgt atacgaaact ttcaaagaag acatacaggc acgaggctac caatacgacc
      421 ccgaaaccga caaatttgca aaggtctcag gctaagtgcg cctgttgccg cctaaaaggc
      481 ggtccggatg cctgattatc gggtatccgg ggaggattaa ggggatatt
//
LOCUS       DBBZXW010000248          529 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.248, whole genome shotgun sequence.
ACCESSION   DBBZXW010000248 DBBZXW010000000
VERSION     DBBZXW010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.248"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..400)
                     /locus_tag="ACJJD2_002195"
     CDS             complement(<1..400)
                     /locus_tag="ACJJD2_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HGG7580639.1"
                     /translation="MPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFAFAGLML
                     CVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKAVDSGGR
                     TFDLLLSDYKRREWAVGSRWRITARVHPVVG"
BASE COUNT          163 a          187 c          107 g           72 t
ORIGIN      
        1 ccccgacgac agggtgcaca cgtgccgtta tccgccatct gctcccgacc gcccattcgc
       61 gccgtttgta gtccgacagc agcaaatcaa acgtccgacc accgctgtcc acagcctttg
      121 ccgcaaactg cacacgccgc ccgtccgacc tcggcatatc cgccacttcc accgtcaaag
      181 gcacgcctga aacggcttct gcccaccatt gggaagacaa tgccgcctcc gtcctgaata
      241 cgccgtaagc cgcgcccgcc aacacgcaca gcatcagacc ggcaaacgca aaacgccttg
      301 caaacacagc aaaaaccgca aaagccgcca gccaaaacag ccaatgcggc acgaccggca
      361 gcgcgaacga agccgccgca ccgacaaccc aacacggcaa aaaccaacga cggaacacgt
      421 ctccccaccc cagatatttc aaaaataaac ggataataaa gcaaatccga aaaaccgtca
      481 taacaagatt tgaaaatgat atagtggttt aaatttaaat caggacaag
//
LOCUS       DBBZXW010000249          528 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.249, whole genome shotgun sequence.
ACCESSION   DBBZXW010000249 DBBZXW010000000
VERSION     DBBZXW010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.249"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            93..365
                     /locus_tag="ACJJD2_002196"
     CDS             93..365
                     /locus_tag="ACJJD2_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580640.1"
                     /translation="MNKRMKMCPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGMNI
                     FYGEYEKDFYSYVPFMESQGITSECIWEGDLFDHPYYEDENSNDMD"
BASE COUNT          175 a           86 c          119 g          148 t
ORIGIN      
        1 ggttgctata tacgtattgt tgtacagact aaaggcagca atcaaatcac tactgcttac
       61 ccacaaaaat aaatcgatta tatggagtaa tcatgaataa gagaatgaaa atgtgtcctg
      121 cttgtcaaca aggctatctc taccattcga aacctaaata tcttcatgat gaaattattc
      181 tgtgtgatga atgcgatgca gtatggctca aaggtatgaa tatattttat ggagaatatg
      241 aaaaagattt ttattcttat gttcctttca tggaatccca aggtataacg agtgaatgta
      301 tttgggaagg agatttgttt gatcatccat attatgaaga tgaaaactca aatgatatgg
      361 attgatggaa attttaagcc tgcgtaggta cgattagcca tcaaacggcg taatcatacg
      421 caagattatc aacagagagg gctggcagcg atataccacc cacaagattg cccatgccat
      481 agcgggctgt gcggcagcgg cggcgaataa gggtaagtgt caggatgg
//
LOCUS       DBBZXW010000250          523 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.250, whole genome shotgun sequence.
ACCESSION   DBBZXW010000250 DBBZXW010000000
VERSION     DBBZXW010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.250"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..488)
                     /locus_tag="ACJJD2_002197"
     CDS             complement(<1..488)
                     /locus_tag="ACJJD2_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580641.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNILQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GR"
BASE COUNT          157 a          205 c           96 g           65 t
ORIGIN      
        1 aaccgcccca ccagcccgat gacgcacgac accgccggaa agggcataca caaagccgtc
       61 agcacataac gcgcattccc cgtattgacc acgtccgcgc ccttcagcag cagcggcagc
      121 gcgttcgccc actcccacac cgacggcgca ctgaacgcca acaccgccac cagccccaac
      181 atccggaaca ccccgatttc caacacctgc cgccgccgca ccgaacggtt gagcagaaac
      241 acaaccgcca acccgaaaca gaccaccgcc gccataccgc cgttggcgac aatctgcaaa
      301 ctgttgaatg caatatcggg cgtaaccgcc aacacgcctt ccgaatccgg cacggcacgc
      361 tgcaaatcca aaccctgcaa gatattcaac acaaaaccgt agatcaaatc aaaaaacacc
      421 acgcctatcg gcaaagcact caaaacccgc cacatcttcc tgtccgacca accgttcaaa
      481 actttcattt tacccgacca cgcaagccgc cgaacaaaaa ata
//
LOCUS       DBBZXW010000251          508 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.251, whole genome shotgun sequence.
ACCESSION   DBBZXW010000251 DBBZXW010000000
VERSION     DBBZXW010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.251"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            317..>508
                     /locus_tag="ACJJD2_002198"
     CDS             317..>508
                     /locus_tag="ACJJD2_002198"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7580642.1"
                     /translation="MTMQVFLTIPGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKK
                     YIDGVLTAGHGKLYQSDGRH"
BASE COUNT          149 a          126 c          126 g          107 t
ORIGIN      
        1 tgcgcgggaa tgacaactca ttagttacct aaaacttaaa aagcagaaac ctttacgccg
       61 tcattcccac gaaagtggga atccgggaac ttaacgttac agtgatttat cggaaacggc
      121 tgaaaccgaa tgaattggat tcccgcctgc gcgggaatga cgaatccatc cgtacggaaa
      181 cctgcaccac gtcattccca cgaacctaca ttccgtcatt cccacgaaag tgggaatcca
      241 ggacgaaaaa tctccagaaa ccgttttacc cgataagttt ccgcaccgac aggtctggat
      301 tcccgcctgc gcgggaatga cgatgcaggt atttctgacg attcccggct atgatgttga
      361 ggcagaaatc gaaaaattcg tttggatgga tgctgtgatt tggcagatgc cgggctggtg
      421 gatgcacgag ccttggacag tgaaaaaata catagacgga gtattaaccg ctggacacgg
      481 caaactctac caaagcgacg gcagacac
//
LOCUS       DBBZXW010000252          500 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.252, whole genome shotgun sequence.
ACCESSION   DBBZXW010000252 DBBZXW010000000
VERSION     DBBZXW010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.252"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          153 a          136 c          134 g           77 t
ORIGIN      
        1 cggcaaggcg aggcaacgct gtactggttt ttgttagtcc actataaaaa acggcggaaa
       61 tatagtggat taacaaatgc gggaatgacg aaaagcaacc tttccgcgtc cttcccgcga
      121 aagcgggaat ctagaacccc taacgcggca ggaatctatc ggaaaaaacc gaaaccgaac
      181 gaacctagat tcccgcctgc gcgggaatga cgaggcctgc gcgggaatga cgaaaagcaa
      241 cctttccgcg tccttcccgc gaaagcggga atctagaacc cctaacgggc aggaatctat
      301 cggaaaaaac cgaaaccgaa cagactggat tcccgcctgc gcgggaatga cgaagcctgc
      361 gcgggaatga cgaaaagcaa cctttccgcg tcattctcgc gaaagcggga atctagaacc
      421 cctaacgcgg caggaatcta tcggaaaaaa ccgaaaccga acagactgga ttcccgcctg
      481 cgcgggaatg acgaagcctg
//
LOCUS       DBBZXW010000253          475 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.253, whole genome shotgun sequence.
ACCESSION   DBBZXW010000253 DBBZXW010000000
VERSION     DBBZXW010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.253"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>475
                     /locus_tag="ACJJD2_002199"
     CDS             <1..>475
                     /locus_tag="ACJJD2_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7580643.1"
                     /translation="LELINCQLTEKGLKVEKASAAVIDATIIQTAGSEQRQAIEVDEE
                     GQVSGQTTLSKDKNARWTKKNSLYKLGYKQHTRTDAEGYIEKLYITPTNAHECTHLSP
                     LLEGLPKGTTVYADKGYDSKENRQHLKEHRLQNGIMRKACRNRPLTETQTKRNRY"
BASE COUNT          159 a          130 c          110 g           76 t
ORIGIN      
        1 tgttggaact gattaactgc caactgaccg aaaaaggctt aaaagtagag aaagcatccg
       61 ccgccgtcat tgacgccacc attattcaga ccgccggcag cgaacagcgt caggccatag
      121 aagtcgatga agagggacaa gtcagcggtc aaaccacact gagtaaggac aaaaatgccc
      181 gttggacaaa gaaaaacagc ctctacaaac tcggttacaa acaacatacc cgtaccgatg
      241 cggaaggcta tatcgagaaa ctgtacatca ctcccaccaa tgcccatgag tgcacacacc
      301 tgtcgccgtt gttggaagga ctgcccaaag gtacgaccgt ctatgccgac aaaggctacg
      361 acagcaagga aaaccggcaa catctgaaag aacatcggtt gcagaacggc attatgcgca
      421 aagcctgccg caaccgtccg ctgacggaaa cgcaaaccaa acgtaaccga tattt
//
LOCUS       DBBZXW010000254          464 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.254, whole genome shotgun sequence.
ACCESSION   DBBZXW010000254 DBBZXW010000000
VERSION     DBBZXW010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.254"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>464
                     /locus_tag="ACJJD2_002200"
     CDS             <1..>464
                     /locus_tag="ACJJD2_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7580644.1"
                     /translation="KGNLKTEIEKLSKQPEYAYLKQLQVAKNINWNQVQLAYDRWDYK
                     QEGLTEAGAAIIALAVTVVTSGAGTGAVLGLNGAAAAATDAAFASLASQASVSFINNK
                     GDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNL"
BASE COUNT          134 a          127 c          125 g           78 t
ORIGIN      
        1 aaaggcaatc tgaaaaccga aatcgaaaag ctgtccaaac agcccgagta tgcctatctg
       61 aaacagctcc aagtagcgaa aaacatcaac tggaatcagg tgcagcttgc ttacgacaga
      121 tgggactaca aacaggaggg cttaaccgaa gcaggtgcgg cgattatcgc actggccgtt
      181 accgtggtca cctcaggcgc aggaaccgga gccgtattgg gattaaacgg tgcggccgcc
      241 gccgcaaccg atgcagcatt cgcctctttg gccagccagg cttccgtatc gttcatcaac
      301 aacaaaggcg atgtcggcaa aaccctgaaa gagctgggca gaagcagcac ggtgaaaaat
      361 ctggtggttg ccgccgctac cgcaggcgta gccgacaaaa tcggcgcttc ggcactgaac
      421 aatgtcagcg ataagcagtg gatcaacaac ctgaccgtca acct
//
LOCUS       DBBZXW010000255          446 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.255, whole genome shotgun sequence.
ACCESSION   DBBZXW010000255 DBBZXW010000000
VERSION     DBBZXW010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.255"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          127 a          112 c           96 g          111 t
ORIGIN      
        1 taaagaatcg ttctctttga gctaaggcga ggcaacgccg tactggtttt tgttaatcca
       61 ctatatccgt ttgcgcccgc caagccgtgt tgcacagatg cgacacggct tttttctttc
      121 tgttgtcaga atgtaaattt tcgtcaaaaa acatcaaaaa tcaccccccc ccgaatttgc
      181 gtaaaataaa gtgtaatccc tttgatcata agggaatgtt gacaattaga tcgattctcc
      241 taggctgact ttcgcaataa atggggttgt caataattgt gtatggtcgt ttgccgtccg
      301 gcggccgtca ttcccgcgaa cgcaggaatc cagcaacaca atgcagcagg actttatcgg
      361 aaaaaaccga acccccaccg ccgtcattcc cgcgcaggcg ggaatccaaa gacgcaacgc
      421 aacaggaatt tatcggaaaa aacaga
//
LOCUS       DBBZXW010000256          432 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.256, whole genome shotgun sequence.
ACCESSION   DBBZXW010000256 DBBZXW010000000
VERSION     DBBZXW010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.256"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           89 a           80 c          130 g          133 t
ORIGIN      
        1 tgccgtgatt caggtaatac tcggtaacgg ctgatttttg accttcagcc aaaagaatga
       61 cgaattttag gtttctgttt ttggttttct gtccttgtgg gaatgatgaa attttaagtt
      121 ttaggaattt atcgaaaaaa cagaaaccgc tccgccgtca ttcccgcgca ggcgggaatc
      181 cagcctcgtc ggtgcggaaa cttatcgggt aaaacggttt cttgagattt tacgttctgg
      241 attcccactt tcgtgggaat gacgggatgt aggttcgtgg gaatgacggt ttaggtattt
      301 ttatagaaag ccgtaggtgg tgtttctatg caaacggcag atgaagcgtc gcggcaggtt
      361 gacggcaggt gcttggtgtc gatgttggcg gtgcccttgc cgttggcggc ggtgacttcg
      421 tcgttgttgg cg
//
LOCUS       DBBZXW010000257          422 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.257, whole genome shotgun sequence.
ACCESSION   DBBZXW010000257 DBBZXW010000000
VERSION     DBBZXW010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.257"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(163..>422)
                     /locus_tag="ACJJD2_002201"
     CDS             complement(163..>422)
                     /locus_tag="ACJJD2_002201"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580645.1"
                     /translation="EATTYWFKFNPLYKSMWFDNGKLVFISFTNQQMENQSRPSLAMF
                     ISDDKISSTDIDEFLASFDPDKYRIFHDPRYKFLPSMSNSL"
BASE COUNT          149 a           64 c           63 g          146 t
ORIGIN      
        1 taatagctgc cattatgcct actaggatat ataccttcta tataatcctt atttaaataa
       61 aaacccttat aaaaatctgt gttatctgtc gggattgaaa aaaagatttt atctttctca
      121 tcaggtttat atttgctatc aatatcaaaa agagaataag gattacaatg agttcgacat
      181 actaggtaaa aatttatatc ttggatcatg aaatattcga tatttatcag gatcgaaaga
      241 tgctaaaaat tcatcaatat cggtactgga tattttgtca tcactaataa acatcgctag
      301 agatgggcga ctttgatttt ccatttgttg attagtaaag gatataaata ctaacttgcc
      361 attgtcaaac cacatagatt tatatagtgg attaaattta aaccagtacg tcgttgcctc
      421 gc
//
LOCUS       DBBZXW010000258          420 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.258, whole genome shotgun sequence.
ACCESSION   DBBZXW010000258 DBBZXW010000000
VERSION     DBBZXW010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.258"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          134 a           94 c           94 g           98 t
ORIGIN      
        1 cgtacggatg gattcgtcat tcccgcgcag gcgggaatct agacattcaa tgctaaggca
       61 atttatcggg aatgactgaa actcaaaaaa ctagattccc actttcgtgg gaatgacggc
      121 agagcggatt ctgttgctcc cgataaatgc cgcaacctca aatcccgtca ttcccgcgca
      181 ggcgggaatc taggtctgtc ggtgcggaaa cttatcggat aaaacggttt cttgagattt
      241 tacgttctgg attcccactt tcgtgggaat gacgggatta aagtttcaaa atttattcta
      301 aatagctgaa actcaacgca ctagattccc gcctgcgcgg gaatgacggc atattttgac
      361 attgaataaa aaagactaaa aacagaaaac agccaaacag aaaacagcca aacagaaaac
//
LOCUS       DBBZXW010000259          374 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.259, whole genome shotgun sequence.
ACCESSION   DBBZXW010000259 DBBZXW010000000
VERSION     DBBZXW010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.259"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>374
                     /locus_tag="ACJJD2_002202"
     CDS             <1..>374
                     /locus_tag="ACJJD2_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC/PilY family type IV pilus protein"
                     /protein_id="HGG7580646.1"
                     /translation="DTFGIVSEGSFMPDTSEWKKVLLPWTVRASNDDGQFNTFNKEEN
                     NGKPKYSQKYRSRDSSKHERNLGDIVNSPIVAVGGYLATSANDGMVHIFKKGNGVDER
                     NYSLKLSYIPGTMPRQYFDNDTS"
BASE COUNT          110 a           94 c           94 g           76 t
ORIGIN      
        1 gacactttcg gcattgttag tgaagggagc ttcatgcctg ataccagcga gtggaaaaaa
       61 gtattgctgc cttggacggt tcgtgcttcc aatgatgacg gtcaatttaa cacattcaac
      121 aaagaagaaa acaacggcaa gccaaaatac agtcaaaaat accgcagccg cgacagcagc
      181 aagcacgagc gcaatttggg cgacatcgtc aacagcccca tcgtggcggt cggcgggtat
      241 ttggctactt ccgccaacga cgggatggtg catatcttca aaaaaggcaa cggcgtggac
      301 gagcgcaact atagtctgaa gctcagttat atccccggca cgatgccgcg ccaatatttt
      361 gataacgaca cttc
//
LOCUS       DBBZXW010000260          372 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.260, whole genome shotgun sequence.
ACCESSION   DBBZXW010000260 DBBZXW010000000
VERSION     DBBZXW010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.260"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(168..>372)
                     /locus_tag="ACJJD2_002203"
     CDS             complement(168..>372)
                     /locus_tag="ACJJD2_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580647.1"
                     /translation="IGGQSTAAIADLAGEMRRLAKKSKMLLKGLWPFLSSTISAFKIN
                     QSLFKHYCKTVQLLNCKHRKKNY"
BASE COUNT          112 a           68 c           76 g          116 t
ORIGIN      
        1 agagatgaaa cagcgtatcg gctccctgcc ggttgaattt tccgaaaaaa cgcgacgtaa
       61 ccagcatcaa catatataag aacagcacaa atagcatcaa tacatcaggc aacgaaaatg
      121 cagaataatg cacttaatgg tgtttggata tctgttgttt tgtgctgtta gtaattcttc
      181 tttctgtgtt tacagtttag cagttgtaca gttttacagt aatgtttaaa caatgactga
      241 tttattttaa atgcagatat tgtagaggat aaaaatggcc aaagtccttt cagtaacatt
      301 tttgattttt tagcgagcct tctcatttcc ccggcgagat cggcaatggc agcggtactt
      361 tggccgccga ta
//
LOCUS       DBBZXW010000261          365 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.261, whole genome shotgun sequence.
ACCESSION   DBBZXW010000261 DBBZXW010000000
VERSION     DBBZXW010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.261"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>365
                     /locus_tag="ACJJD2_002204"
     CDS             <1..>365
                     /locus_tag="ACJJD2_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580648.1"
                     /translation="DSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIEDIPFYIFD
                     LADFDVGIGDIGNIVGFAPSSSLPKSKKNALTGIAFLRGIDVYDPPVSKEKALKALEK
                     YPEIYQKFQHFFPFVELPP"
BASE COUNT          107 a           64 c           74 g          120 t
ORIGIN      
        1 ggatagtgat gatttaggat ttgcaattaa atgcttattc tctcaatcta ttgatttaaa
       61 tgaattcaag ttatggattg aacaagtaat acgagatatg cccattgagg acatcccttt
      121 ttatattttt gacttggcgg atttcgatgt aggaattggc gatattggca atattgtagg
      181 ttttgctccg agttccagcc tgccgaaatc gaaaaaaaat gccttgaccg gcattgcctt
      241 cttaaggggg atagatgtct atgaccctcc cgtttcaaaa gaaaaagcat taaaagcctt
      301 agagaaatat cctgaaattt atcagaaatt tcagcatttc tttccgtttg tagagctgcc
      361 tccgc
//
LOCUS       DBBZXW010000262          351 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.262, whole genome shotgun sequence.
ACCESSION   DBBZXW010000262 DBBZXW010000000
VERSION     DBBZXW010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.262"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..341)
                     /locus_tag="ACJJD2_002205"
     CDS             complement(<1..341)
                     /locus_tag="ACJJD2_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580649.1"
                     /translation="MKIKPLQFSNNSRRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFDF
                     FEKKYYKAYIF"
BASE COUNT          122 a           53 c           33 g          143 t
ORIGIN      
        1 aagaaaatat aagccttata atatttcttt tcaaaaaaat caaaactttc ttctttcaac
       61 cagtccatat aactgtcatc tattatctcg aaaaaataat ttatagcagg atttctatcc
      121 caatcatttt tttctttatt ttcaaataaa tattctgaaa attttacttt ataagattca
      181 tctgttattt gaaaatgaat tatattgtca ataaatattt caatatttaa ttcataattt
      241 cggtcggatg ccaaaatgtt cacatcttgt tcggtaacac aaattttgtc tacgtaaaat
      301 ctgcgactat tgttagaaaa ttgtaatggt ttaatcttca ctatcgtttt c
//
LOCUS       DBBZXW010000263          351 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.263, whole genome shotgun sequence.
ACCESSION   DBBZXW010000263 DBBZXW010000000
VERSION     DBBZXW010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.263"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           84 a           78 c           98 g           91 t
ORIGIN      
        1 gcttcatcat tcccgagtag gcgggaatct agtccgcttg ttcggtaaat gagagggcgg
       61 attgcgcgcc tgtcagataa accacgtgtt taaacgggcg gcaatgaggt acgcgcagag
      121 ccttgaagcg cagtcgatat attattttcc accaaaacgg acgaccccgc ttgccttgca
      181 aacctttaaa aaggaagcca cccggattaa tccgagtggc cgtggaaaat cacttaccgc
      241 ttgatttatt taaaatttat ggtataattt accttagctg gtagatgaat catcgcggca
      301 ggttgacggc aggtgcttgg tgtcgatctt cttggtggtg gcggcggcgg t
//
LOCUS       DBBZXW010000264          349 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.264, whole genome shotgun sequence.
ACCESSION   DBBZXW010000264 DBBZXW010000000
VERSION     DBBZXW010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.264"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           99 a           73 c           76 g          101 t
ORIGIN      
        1 tttatagtgg attaacaaaa atcaggagaa agcgacgaag ccgcagacag tacggatagt
       61 gcggaaccga ctcactcggt gcttcagcac cttagagaat cgttctcttc gagctaagtc
      121 aaggcaacgc tgtactggtt tttgttaatc cactatagat tttacgtcct agattcccgc
      181 ctgcgcggga atgacgaatt tcaattttct gtttttgatt ttttgttttt acaggaatga
      241 cggtcttttc atatcgaaaa aagttgccgt accgcaccga taatttccgc ctgcgcggaa
      301 tgaagattca agcgttgccc gaaattcaaa aaaactatag tggattaac
//
LOCUS       DBBZXW010000265          334 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.265, whole genome shotgun sequence.
ACCESSION   DBBZXW010000265 DBBZXW010000000
VERSION     DBBZXW010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.265"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..291
                     /locus_tag="ACJJD2_002206"
     CDS             <1..291
                     /locus_tag="ACJJD2_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580650.1"
                     /translation="KFIFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQAIHE
                     QPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
BASE COUNT          119 a           82 c           56 g           77 t
ORIGIN      
        1 aaattcattt ttcccgaatt ggacaaagcc aaactgtttg aactgattga gccgagtcat
       61 cacaagctgc ccaagtcttt ggctcccgaa gcctacgact gcgccttttt gaaagctcaa
      121 gccattcatg aacagcccgc attcaaaccg tacaaagacc cttactatat gtacgaatat
      181 tacgagaatc ttgaaaaaca gcttgaacag caaaaacacg tcaacaatga agaaagctat
      241 aacaacttca tttacgacaa attcgcaaga ctaccgattt catgggctta aagtgtctgc
      301 ccgaaagacg tttaatcaca caaggaaacc aaaa
//
LOCUS       DBBZXW010000266          318 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.266, whole genome shotgun sequence.
ACCESSION   DBBZXW010000266 DBBZXW010000000
VERSION     DBBZXW010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.266"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           89 a           70 c           83 g           76 t
ORIGIN      
        1 aggtttctga ttttggtttt ctgtccttgt gggaatgacg ggatgtaggt tcgtaggaat
       61 gacgtggtgc aggtttccgt atggatggat tcgtcgttcc cgcgaaagcg ggaatccgga
      121 accagaaacc acaaaaattt atcgggaaaa ccgaaactca aaaacaacgg aaaccgaacg
      181 gacaggattc ccgcctgcgc gggaatgacg gctcatacat cacccaaaaa attgaaacca
      241 aacagatggg attccctctt gcgtgaggct gacagatgcc gtctgaaaga ctttcagacg
      301 gcatagcttt ttctcttt
//
LOCUS       DBBZXW010000267          314 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.267, whole genome shotgun sequence.
ACCESSION   DBBZXW010000267 DBBZXW010000000
VERSION     DBBZXW010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.267"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>314
                     /locus_tag="ACJJD2_002207"
     CDS             <1..>314
                     /locus_tag="ACJJD2_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HGG7580651.1"
                     /translation="GCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDFFNGEYSPNQA
                     REDRNKGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQ
                     LG"
BASE COUNT          101 a           74 c           78 g           61 t
ORIGIN      
        1 ggttgcggcg tcgcaaaaga aggctgggaa tcacgacttt tcgcattcct gactaatgca
       61 atccgcccaa aaatcacacg cgttgacatc gcaaaagact ttttcaacgg cgaatacagc
      121 ccgaaccaag cccgtgaaga ccgaaataaa ggtatgttta cctgtcatca cgtcaaacca
      181 aaaggcgaat gtttggggtc agattgggaa gaagacgatg aagccaaaat gaccaaaggc
      241 aagacctatg gtatcggctc ccgtgaatcg tccaaatatg tccgcgtcta tgaaaaaggc
      301 aagcagttgg gcga
//
LOCUS       DBBZXW010000268          298 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.268, whole genome shotgun sequence.
ACCESSION   DBBZXW010000268 DBBZXW010000000
VERSION     DBBZXW010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.268"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          106 a           82 c           51 g           59 t
ORIGIN      
        1 tgttaaacca ctataagaat gcaaacgaaa agcctcagta ttatccgaga caacggcaaa
       61 ctttccatcg tcattcccgc acaagcggga atccaaaaac aaaaagccgc agaaatttaa
      121 cggaagaacc aaaccccgaa aaccggctcc ccgccttcgc ttgaataaca gaacaaagga
      181 atcagtatta tccgagacaa ccgcaaactt tccatcgtca ttcccgcaca agcgggaatc
      241 caaacttgtc cgcacggaaa cttatcggat aaaacggttt cttagattct acgttcta
//
LOCUS       DBBZXW010000269          290 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.269, whole genome shotgun sequence.
ACCESSION   DBBZXW010000269 DBBZXW010000000
VERSION     DBBZXW010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.269"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..>290)
                     /locus_tag="ACJJD2_002208"
     CDS             complement(<1..>290)
                     /locus_tag="ACJJD2_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153708080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HGG7580652.1"
                     /translation="DYQRVYLDETGFDRHLFRPYARSLKGQIVKAQISGKRYRRLSLV
                     SAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGV"
BASE COUNT           76 a           71 c           67 g           76 t
ORIGIN      
        1 acacccatac ggtgaaatcg cgcattatct aaaataatca ccgatttttg agtcaatgcg
       61 ggcagtaggc attgctgaaa ccacgcttca aaaaagactc cggtcatcgt attttgataa
      121 accatcggag caatcagccg gttgccgact tgtgcggaca ccagagataa gcgtcggtat
      181 ctttttccac ttatctgcgc tttcactatt tgccctttca ggctgcgggc atagggacgg
      241 aacaggtggc ggtcaaatcc tgtttcatcc aaataaacgc gttggtagtc
//
LOCUS       DBBZXW010000270          287 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.270, whole genome shotgun sequence.
ACCESSION   DBBZXW010000270 DBBZXW010000000
VERSION     DBBZXW010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.270"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>287
                     /locus_tag="ACJJD2_002209"
     CDS             <1..>287
                     /locus_tag="ACJJD2_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HGG7580653.1"
                     /translation="HITEVKEHKNAKPDAVNLSASQGIDIKSGGSIDAYATAFDAPKG
                     SINIEAGRKLTLYAVEELNYDKLDSQKRRRFLGISYSKAHDTTTQVMKTALP"
BASE COUNT           98 a           94 c           58 g           37 t
ORIGIN      
        1 cacattaccg aagtcaaaga acacaaaaac gccaagcccg acgcagtaaa cctcagcgca
       61 tcccaaggca tcgacatcaa atctggtggc agcatcgacg cctacgccac cgcattcgat
      121 gcccccaaag gcagcattaa catcgaagcc gggcggaaat tgacactcta tgccgtagaa
      181 gagctcaact acgacaaact agacagccaa aaaaggcgca gatttctcgg catcagctac
      241 agcaaagcac acgacaccac cacccaagtc atgaaaaccg cgctgcc
//
LOCUS       DBBZXW010000271          286 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.271, whole genome shotgun sequence.
ACCESSION   DBBZXW010000271 DBBZXW010000000
VERSION     DBBZXW010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.271"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..>286)
                     /locus_tag="ACJJD2_002210"
     CDS             complement(<1..>286)
                     /locus_tag="ACJJD2_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580654.1"
                     /translation="KKDIFYCEQWSYGYKKLHKPFSEKQAEEKHLKGELYTAVIGSAT
                     QPEYVITLREEVGFFSVHFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRD"
BASE COUNT          101 a           57 c           37 g           91 t
ORIGIN      
        1 taatctctcc atacagccat agaaagaaaa taataattcg aattggaata tttttgaaat
       61 tgatgggtta aataatccct tccaaattta tcgaaaaaat gtaccgaaaa aaaacctact
      121 tcctctcgca aggtaattac atattcaggt tgtgtcgccg aacctattac ggcagtatat
      181 aactcccctt taagatgttt ttcctcagct tgtttctcag aaaaaggctt atgaagtttc
      241 ttataaccat aagaccactg ctcacaataa aaaatatctt tcttca
//
LOCUS       DBBZXW010000272          285 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.272, whole genome shotgun sequence.
ACCESSION   DBBZXW010000272 DBBZXW010000000
VERSION     DBBZXW010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.272"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>285
                     /locus_tag="ACJJD2_002211"
     CDS             <1..>285
                     /locus_tag="ACJJD2_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7580655.1"
                     /translation="GAGVGAALGLNGAAAAAADAAFASLASQASVSLINNKGDVGKTL
                     KELGRSRTVKNLVVAAATAGVSNKLGASSLATWSETPWVNNLNVNLANAG"
BASE COUNT           68 a           88 c           80 g           49 t
ORIGIN      
        1 cgggcgcggg agtcggagcc gcactaggct taaacggcgc agccgcagca gcggccgatg
       61 ccgcctttgc ctcactcgct tctcaggctt ccgtatcgct catcaacaat aaaggcgatg
      121 tcggcaaaac cctgaaggaa ctgggcagaa gccgcacggt aaaaaatctg gttgtagcgg
      181 cggcaacggc aggcgtatcc aacaaactcg gtgcctcttc ccttgccact tggagcgaaa
      241 ccccttgggt aaacaacctc aacgttaacc tggccaatgc gggca
//
LOCUS       DBBZXW010000273          276 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.273, whole genome shotgun sequence.
ACCESSION   DBBZXW010000273 DBBZXW010000000
VERSION     DBBZXW010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.273"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..180
                     /locus_tag="ACJJD2_002212"
     CDS             <1..180
                     /locus_tag="ACJJD2_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580656.1"
                     /translation="LAEGYTYFFNENTDDCYVLKEDFINNERYEKTELYSQKDKVILF
                     PKFGEYDLVLNPDII"
BASE COUNT          103 a           28 c           52 g           93 t
ORIGIN      
        1 ttagcagaag gatatactta tttcttcaat gaaaatacgg atgattgcta tgttttgaaa
       61 gaggatttta ttaataatga gcgatatgaa aaaacagaat tatattccca aaaagataag
      121 gtaattctat ttccaaagtt tggtgaatat gatttggtgt taaatccgga cattatttaa
      181 ttaagtttta aggccgtctg aaaaaaattt caaacggctt ttattattgg gtttggaatc
      241 tgaggataaa gctgataaaa accaggaaat tatcag
//
LOCUS       DBBZXW010000274          274 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.274, whole genome shotgun sequence.
ACCESSION   DBBZXW010000274 DBBZXW010000000
VERSION     DBBZXW010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.274"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           86 a           74 c           46 g           68 t
ORIGIN      
        1 gatttgagat tgcggcattt atcgggagca acagaatccg ctctgccgtc attcccacga
       61 aagtgggaat ccaggacaca aaatctcaag aaaccgtttt gcccgataag tttccgcacc
      121 gacagaccta gattcccgcc tgcgtgggaa tgacggcgga aagattctat ttttcccgat
      181 aatcacccac aatctcaaat tccttcattc tctcaaaaac aaaatcagaa ccctaaatcc
      241 catcatcccc atctatgtga atataaaaat ttta
//
LOCUS       DBBZXW010000275          254 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.275, whole genome shotgun sequence.
ACCESSION   DBBZXW010000275 DBBZXW010000000
VERSION     DBBZXW010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.275"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>254
                     /locus_tag="ACJJD2_002213"
     CDS             <1..>254
                     /locus_tag="ACJJD2_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HGG7580657.1"
                     /translation="ANLINLATKPEWCMKMLNTERRTFRNIVGHAKNVGDLSSLSSWT
                     SEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAK"
BASE COUNT           71 a           62 c           70 g           51 t
ORIGIN      
        1 tcgccaattt aatcaatctg gcgaccaaac cggaatggtg catgaaaatg ctgaacacgg
       61 aacgccgcac gttccgcaat atcgtcggac acgcgaagaa cgtcggcgat ttgtcttcgc
      121 tgtcttcatg gacttccgaa caattcgacc cgcgcctgag ctgggacgat gtggcgcgta
      181 ttaaagattt gtggggcggc aagctgatta tcaaaggcat tatggaaccc gaagacgcgg
      241 aaaaagcagc gaaa
//
LOCUS       DBBZXW010000276          253 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.276, whole genome shotgun sequence.
ACCESSION   DBBZXW010000276 DBBZXW010000000
VERSION     DBBZXW010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.276"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(30..>253)
                     /locus_tag="ACJJD2_002214"
     CDS             complement(30..>253)
                     /locus_tag="ACJJD2_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Imm41 family immunity protein"
                     /protein_id="HGG7580658.1"
                     /translation="DIVIGIGSIIDFLMVQNWKLFEIKASPWLPKSVKINERYERFRV
                     MLRYIFTDLDVEDWKFFYFPIQHSKGRLR"
BASE COUNT           91 a           51 c           27 g           84 t
ORIGIN      
        1 ataatgtatc tccaatataa ttaaactttt catctcaatc tacctttact atgttgtatt
       61 ggaaagtaaa aaaatttcca gtcctctaca tctagatcag taaaaatata acggagcatt
      121 actctgaacc tttcataacg ctcattaatt ttgacacttt taggcaacca aggggaagct
      181 ttaatttcaa aaagtttcca attttgaacc attaaaaaat caataatgct acctattcca
      241 atcacgatgt ccc
//
LOCUS       DBBZXW010000277          233 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.277, whole genome shotgun sequence.
ACCESSION   DBBZXW010000277 DBBZXW010000000
VERSION     DBBZXW010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.277"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           72 a           52 c           28 g           81 t
ORIGIN      
        1 atttttttat ctctagccga atacagttca acccaaacgt acccgtcttg gatacacccc
       61 ctcttgtttc agtggcgtac cctgcttcgc aaattttaca gttatcgcat aataatcagc
      121 cataagtaac cccacatttc tagaaaaatt tactgaattc gtgcattaac tactattctt
      181 atagaattat ttatttcatc gtaaagtgga atatattcac tattatcaga aat
//
LOCUS       DBBZXW010000278          232 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.278, whole genome shotgun sequence.
ACCESSION   DBBZXW010000278 DBBZXW010000000
VERSION     DBBZXW010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.278"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(40..>232)
                     /locus_tag="ACJJD2_002215"
     CDS             complement(40..>232)
                     /locus_tag="ACJJD2_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580659.1"
                     /translation="KVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAINA
                     GLEEIGNQYEFVVFGFLKD"
BASE COUNT           65 a           51 c           51 g           65 t
ORIGIN      
        1 gatggagcgt ttttcagacg accgccgaac atccgaaaat cagtctttca aaaatccgaa
       61 tacgacaaat tcgtattggt tgccgatttc ttccaaacct gcgttaatcg cttcttcgaa
      121 gtcgtagaaa taatcggcat tggtgattaa tttggtatgt ccgatgtcgc ccgtttcagg
      181 agagagatac agaaagtccc ctgttgatac ggactggaca acatagactt tc
//
LOCUS       DBBZXW010000279          231 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.279, whole genome shotgun sequence.
ACCESSION   DBBZXW010000279 DBBZXW010000000
VERSION     DBBZXW010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.279"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>231
                     /locus_tag="ACJJD2_002216"
     CDS             <1..>231
                     /locus_tag="ACJJD2_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580660.1"
                     /translation="VLEGTEFKTTLAGADIQAGVGEKARVDAKIILKGIVNRIQSEEK
                     LETNSTVWQKQAGRGSTIETLKLPSFESPTPPK"
BASE COUNT           74 a           64 c           56 g           37 t
ORIGIN      
        1 gtgctcgaag gtaccgaatt caaaaccacg ctggccggtg ccgacattca ggcaggtgta
       61 ggcgaaaaag cccgtgtcga tgcgaaaatt atcctcaaag gcattgtgaa ccgtatccag
      121 tcggaagaaa aattagaaac caactcaacc gtatggcaga aacaggccgg acgcggcagc
      181 actatcgaaa cgctaaaact gcccagcttc gaaagcccta ctccgcccaa a
//
LOCUS       DBBZXW010000280          215 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9124
            SAMN35339249-rid24040803.denovo.280, whole genome shotgun sequence.
ACCESSION   DBBZXW010000280 DBBZXW010000000
VERSION     DBBZXW010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339249
            Sequence Read Archive: SRR30912782
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479096.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479096.1
            Genome Coverage       :: 176x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:14
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,217
            CDSs (total)                      :: 2,158
            Genes (coding)                    :: 2,025
            CDSs (with protein)               :: 2,025
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 98 of 133
            Pseudo Genes (internal stop)      :: 22 of 133
            Pseudo Genes (multiple problems)  :: 28 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339249-rid24040803.denovo.280"
                     /strain="NZmenB"
                     /isolate="NMI9124"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1991"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>215
                     /locus_tag="ACJJD2_002217"
     CDS             <1..>215
                     /locus_tag="ACJJD2_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7580661.1"
                     /translation="TQFETTLGGATIRAGVGEQARADAKIILEGIKTTIHNETVSSSK
                     SALWQKQAGRGSNIETLQLPSFTGPVAP"
BASE COUNT           64 a           61 c           57 g           33 t
ORIGIN      
        1 acacagtttg aaaccacact gggtggcgca accatacgcg caggcgtagg tgagcaggca
       61 cgggcagatg ccaagattat cctcgaaggc atcaaaacca cgatccacaa cgaaaccgtg
      121 agcagcagca aatctgctct atggcaaaaa caggcaggac ggggcagtaa catcgaaacc
      181 ttgcaattgc cgagtttcac cggtcccgtt gcgcc
//
